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ONTOLOGY REPORT - ANNOTATIONS


Term:response to platelet-derived growth factor
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Accession:GO:0036119 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a platelet-derived growth factor stimulus.
Synonyms:exact_synonym: response to PDGF stimulus;   response to platelet-derived growth factor stimulus



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response to platelet-derived growth factor term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddit3 DNA-damage inducible transcript 3 involved_in ISO MGI:2654034 (MGI:6259047|PMID:24530784) RGD PMID:24530784 MGI:6259047 NCBI chr 7:63,115,645...63,121,203
Ensembl chr 7:63,116,380...63,121,201
JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO MGI:2654034 (MGI:6259047|PMID:24530784) RGD PMID:24530784 MGI:6259047 NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715
JBrowse link
G Fer FER tyrosine kinase involved_in ISS
ISO
GO_REF:0000024
(MGI:5319623|PMID:7623846)
UniProt
RGD
PMID:7623846 GO_REF:0000024 MGI:5319623 NCBI chr 9:103,520,452...103,827,364
Ensembl chr 9:103,520,493...103,821,451
JBrowse link
G Itgb3 integrin subunit beta 3 IEP RGD PMID:21932665 RGD:8693383 NCBI chr10:89,509,917...89,564,679
Ensembl chr10:89,509,989...89,564,679
JBrowse link
cellular response to platelet-derived growth factor stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arpc2 actin related protein 2/3 complex, subunit 2 IDA RGD PMID:22619279 RGD:10047170 NCBI chr 9:75,820,782...75,851,471
Ensembl chr 9:75,820,770...75,851,471
JBrowse link
G Atp7a ATPase copper transporting alpha IMP RGD PMID:20671235 RGD:11341707 NCBI chr  X:71,094,144...71,201,550
Ensembl chr  X:71,094,202...71,198,354
JBrowse link
G Cbl Cbl proto-oncogene IEP RGD PMID:15128873 RGD:1642627 NCBI chr 8:44,487,824...44,571,620
Ensembl chr 8:44,489,410...44,571,176
JBrowse link
G Ccl2 C-C motif chemokine ligand 2 IEP RGD PMID:7589574 RGD:8549588 NCBI chr10:67,005,424...67,007,222
Ensembl chr10:67,005,424...67,007,226
JBrowse link
G Ccna2 cyclin A2 IEP RGD PMID:18667424 RGD:10054494 NCBI chr 2:119,427,239...119,433,645
Ensembl chr 2:119,426,089...119,433,577
JBrowse link
G Coro1b coronin 1B involved_in IDA
IEA
IMP
ISO
GO_REF:0000107
PMID:22619279
(PMID:22619279)
Ensembl
RGD
PMID:22619279 PMID:22619279 PMID:22619279 GO_REF:0000107, RGD:10047170, RGD:10047170 NCBI chr 1:201,442,977...201,448,416
Ensembl chr 1:201,443,014...201,448,416
JBrowse link
G Creb1 cAMP responsive element binding protein 1 IEP RGD PMID:21505978 RGD:10059431 NCBI chr 9:65,903,511...65,972,562
Ensembl chr 9:65,903,547...65,970,816
JBrowse link
G Dnmt1 DNA methyltransferase 1 IEP RGD PMID:23423710 RGD:9588226 NCBI chr 8:19,440,611...19,486,659
Ensembl chr 8:19,440,611...19,486,659
JBrowse link
G Errfi1 ERBB receptor feedback inhibitor 1 IEP RGD PMID:15556944 RGD:9685545 NCBI chr 5:161,323,981...161,337,289
Ensembl chr 5:161,323,998...161,337,282
JBrowse link
G Fn1 fibronectin 1 IEP RGD PMID:15627306 RGD:7205462 NCBI chr 9:73,196,044...73,264,695
Ensembl chr 9:73,196,044...73,264,678
JBrowse link
G Fyn FYN proto-oncogene, Src family tyrosine kinase acts_upstream_of_or_within ISO (MGI:3723332|PMID:17623777) RGD PMID:17623777 MGI:3723332 NCBI chr20:42,767,733...42,960,903
Ensembl chr20:42,766,369...42,959,911
JBrowse link
G Gja1 gap junction protein, alpha 1 involved_in ISO (PMID:18239136) RGD PMID:18239136 NCBI chr20:35,756,007...35,768,481
Ensembl chr20:35,755,991...35,768,582
JBrowse link
G Gja5 gap junction protein, alpha 5 involved_in ISO (PMID:18239136) RGD PMID:18239136 NCBI chr 2:184,602,407...184,621,952
Ensembl chr 2:184,564,475...184,621,952
JBrowse link
G Has1 hyaluronan synthase 1 involved_in ISO (PMID:17324121) RGD PMID:17324121 NCBI chr 1:58,693,411...58,705,653
Ensembl chr 1:58,693,411...58,705,397
JBrowse link
G Has2 hyaluronan synthase 2 involved_in ISO (PMID:17324121) RGD PMID:17324121 NCBI chr 7:88,113,326...88,139,337
Ensembl chr 7:88,113,326...88,128,933
JBrowse link
G Hdac1 histone deacetylase 1 involved_in IGI PMID:28867608 BHF-UCL PMID:28867608 RGD:150521633 NCBI chr 5:141,853,992...141,881,057
Ensembl chr 5:141,853,989...141,881,111
JBrowse link
G Hyal1 hyaluronidase 1 involved_in ISO
ISS
(PMID:17324121)
GO_REF:0000024
RGD
UniProt
PMID:17324121 GO_REF:0000024 NCBI chr 8:108,250,654...108,254,526
Ensembl chr 8:108,250,667...108,260,210
JBrowse link
G Iqgap1 IQ motif containing GTPase activating protein 1 involved_in ISO (MGI:5430891|PMID:17563371) RGD PMID:17563371 MGI:5430891 NCBI chr 1:134,679,581...134,769,776
Ensembl chr 1:134,679,586...134,769,755
JBrowse link
G Itgb3 integrin subunit beta 3 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:2175913 (MGI:5462513|PMID:22984613)
GO_REF:0000107
RGD
Ensembl
PMID:22984613 GO_REF:0000107 MGI:5462513 NCBI chr10:89,509,917...89,564,679
Ensembl chr10:89,509,989...89,564,679
JBrowse link
G Ltbp1 latent transforming growth factor beta binding protein 1 IEP RGD PMID:14708940 RGD:10412060 NCBI chr 6:20,029,629...20,425,339
Ensembl chr 6:20,029,629...20,425,349
JBrowse link
G Mars1 methionyl-tRNA synthetase 1 involved_in ISO (PMID:10791971) RGD PMID:10791971 NCBI chr 7:63,121,142...63,138,550
Ensembl chr 7:63,121,142...63,138,495
JBrowse link
G Mir125a microRNA 125a IEP RGD PMID:30156956 RGD:26884369 NCBI chr 1:58,677,626...58,677,710
Ensembl chr 1:58,677,626...58,677,710
JBrowse link
G Mtss2 MTSS I-BAR domain containing 2 involved_in ISO (PMID:20875796) RGD PMID:20875796 NCBI chr19:38,692,793...38,714,575
Ensembl chr19:38,693,194...38,713,507
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor IEP RGD PMID:7524476 RGD:10059620 NCBI chr 7:93,593,705...93,598,633
Ensembl chr 7:93,593,705...93,598,630
JBrowse link
G Myh9 myosin, heavy chain 9 IEP RGD PMID:8888698 RGD:11533927 NCBI chr 7:109,343,718...109,424,457
Ensembl chr 7:109,343,706...109,424,457
JBrowse link
G Pcsk5 proprotein convertase subtilisin/kexin type 5 IEP RGD PMID:11882580 RGD:11556216 NCBI chr 1:214,837,847...215,267,626
Ensembl chr 1:214,837,927...215,267,600
JBrowse link
G Pdgfb platelet derived growth factor subunit B involved_in ISS
ISO
GO_REF:0000024
(MGI:6827319|PMID:28867608)
ARUK-UCL
RGD
PMID:28867608 GO_REF:0000024 MGI:6827319 NCBI chr 7:111,539,444...111,557,984
Ensembl chr 7:111,540,345...111,557,984
JBrowse link
G Pdgfd platelet derived growth factor D IEP RGD PMID:16039137 RGD:1581755 NCBI chr 8:3,488,448...3,722,395
Ensembl chr 8:3,488,423...3,722,395
JBrowse link
G Pdgfrb platelet derived growth factor receptor beta involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000108
(MGI:5699914|PMID:26437238)
GOC
RGD
PMID:26437238 GO_REF:0000108 MGI:5699914 NCBI chr18:54,500,002...54,538,843
Ensembl chr18:54,499,964...54,538,843
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma involved_in ISO (MGI:5462034|PMID:21880694) RGD PMID:21880694 MGI:5462034 NCBI chr 4:148,423,102...148,548,471
Ensembl chr 4:148,423,194...148,548,468
JBrowse link
G Prkce protein kinase C, epsilon involved_in IMP PMID:22619279 UniProt PMID:22619279 RGD:10047170 NCBI chr 6:7,965,048...8,451,966
Ensembl chr 6:7,965,048...8,451,719
JBrowse link
G Ptn pleiotrophin IEP RGD PMID:16226713 RGD:9834996 NCBI chr 4:65,293,731...65,375,572
Ensembl chr 4:65,293,734...65,375,456
JBrowse link
G Rasa1 RAS p21 protein activator 1 IDA RGD PMID:9612285 RGD:10002728 NCBI chr 2:15,857,704...15,940,757
Ensembl chr 2:15,857,980...15,940,854
JBrowse link
G Rdx radixin IEP RGD PMID:8647942 RGD:8693616 NCBI chr 8:52,379,494...52,437,673
Ensembl chr 8:52,379,494...52,437,678
JBrowse link
G Serpine1 serpin family E member 1 IEP RGD PMID:10615432 RGD:8547892 NCBI chr12:19,601,272...19,611,657
Ensembl chr12:19,601,272...19,611,657
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase acts_upstream_of_or_within ISO
IEP
(MGI:3723332|PMID:17623777) RGD PMID:17623777 PMID:11417999 MGI:3723332, RGD:150524323 NCBI chr 3:146,091,969...146,139,492
Ensembl chr 3:146,091,841...146,139,476
JBrowse link
G Syap1 synapse associated protein 1 involved_in ISO (PMID:23300339) RGD PMID:23300339 NCBI chr  X:31,792,180...31,826,672
Ensembl chr  X:31,792,193...31,826,667
JBrowse link
G Tlr4 toll-like receptor 4 involved_in ISO
IEA
(MGI:5462034|PMID:21880694)
GO_REF:0000107
RGD
Ensembl
PMID:21880694 GO_REF:0000107 MGI:5462034 NCBI chr 5:80,145,867...80,159,501
Ensembl chr 5:80,145,826...80,159,628
JBrowse link
G Yes1 YES proto-oncogene 1, Src family tyrosine kinase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3723332|PMID:17623777)
GO_REF:0000107
RGD
Ensembl
PMID:17623777 GO_REF:0000107 MGI:3723332 NCBI chr 9:113,200,256...113,275,942
Ensembl chr 9:113,200,256...113,299,837
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18734
    response to stimulus 10209
      response to endogenous stimulus 2085
        response to platelet-derived growth factor 42
          cellular response to platelet-derived growth factor stimulus 39
Path 2
Term Annotations click to browse term
  biological_process 18734
    response to stimulus 10209
      response to chemical 6156
        response to organic substance 3899
          response to growth factor 867
            response to platelet-derived growth factor 42
              cellular response to platelet-derived growth factor stimulus 39
paths to the root