Send us a Message



 Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) RatMine GViewer (Genome Viewer) Overgo Probe Designer VCMap
Aging & Age-Related Disease Cancer Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models PhenoMiner (Quantitative Phenotypes) Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:long-chain fatty acid binding
go back to main search page
Accession:GO:0036041 term browser browse the term
Definition:Binding to a long-chain fatty acid. A long-chain fatty acid is a fatty acid with a chain length between C13 and C22.

GViewer not supported for the selected species.

show annotations for term's descendants           Sort by:
 
long-chain fatty acid binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fabp2 fatty acid binding protein 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936869:146,567...149,929 JBrowse link
G Fabp3 fatty acid binding protein 3 enables ISO (PMID:3421901) BHF-UCL PMID:3421901 NCBI chrNW_004936474:14,576,582...14,584,362 JBrowse link
G Fabp4 fatty acid binding protein 4 enables ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chrNW_004936656:2,722,970...2,727,383 JBrowse link
G Prr7 proline rich 7, synaptic enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936597:1,726,143...1,735,295 JBrowse link
G Rida reactive intermediate imine deaminase A homolog ISO RGD PMID:10101265 RGD:9685549 NCBI chrNW_004936470:44,710,481...44,721,159 JBrowse link
G Ucp1 uncoupling protein 1 enables IEA Ensembl
UniProt		 GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004936535:7,258,146...7,265,475 JBrowse link
arachidonic acid binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpr31 G protein-coupled receptor 31 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936489:16,702,024...16,703,000 JBrowse link
G Hnf4a hepatocyte nuclear factor 4 alpha ISO RGD PMID:11940586 RGD:625581 NCBI chrNW_004936530:2,401,053...2,425,989 JBrowse link
G LOC101963472 arachidonate 5-lipoxygenase activating protein enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936472:25,477,094...25,502,823 JBrowse link
G Pparg peroxisome proliferator activated receptor gamma enables ISO (MGI:3793920|PMID:9568715) BHF-UCL PMID:9568715 MGI:3793920 NCBI chrNW_004936602:1,230,907...1,368,588 JBrowse link
G S100a8 S100 calcium binding protein A8 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936580:3,256,399...3,256,913 JBrowse link
G Snca synuclein alpha enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936685:2,077,017...2,175,298 JBrowse link
G Stx3 syntaxin 3 enables ISO PMID:16598260 HGNC-UCL PMID:16598260 RGD:8553500 NCBI chrNW_004936581:2,944,230...2,976,957 JBrowse link
icosatetraenoic acid binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fabp3 fatty acid binding protein 3 ISO RGD PMID:11170430 RGD:1582405 NCBI chrNW_004936474:14,576,582...14,584,362 JBrowse link
linoleic acid binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ppard peroxisome proliferator activated receptor delta enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:23,799,285...23,886,606 JBrowse link
stearic acid binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnf4a hepatocyte nuclear factor 4 alpha ISO RGD PMID:11940586 RGD:625581 NCBI chrNW_004936530:2,401,053...2,425,989 JBrowse link
G Pitpna phosphatidylinositol transfer protein alpha enables ISO PMID:12641450 UniProt PMID:12641450 RGD:8553638 NCBI chrNW_004936538:7,663,457...7,704,484 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 16418
    binding 14661
      lipid binding 634
        fatty acid binding 35
          long-chain fatty acid binding 15
            5(S)-hydroxyperoxy-6E,8Z,11Z,14Z-icosatetraenoic acid binding 0
            5-hydroxy-6E,8Z,11Z,14Z-icosatetraenoic acid binding 0
            5-oxo-6E,8Z,11Z,14Z-icosatetraenoic acid binding 0
            icosatetraenoic acid binding + 8
            isopentadecanoic acid binding 0
            linoleic acid binding 1
            stearic acid binding 2
Path 2
Term Annotations click to browse term
  molecular_function 16418
    binding 14661
      ion binding 4393
        anion binding 2074
          carboxylic acid binding 141
            monocarboxylic acid binding 59
              fatty acid binding 35
                long-chain fatty acid binding 15
                  5(S)-hydroxyperoxy-6E,8Z,11Z,14Z-icosatetraenoic acid binding 0
                  5-hydroxy-6E,8Z,11Z,14Z-icosatetraenoic acid binding 0
                  5-oxo-6E,8Z,11Z,14Z-icosatetraenoic acid binding 0
                  icosatetraenoic acid binding + 8
                  isopentadecanoic acid binding 0
                  linoleic acid binding 1
                  stearic acid binding 2
paths to the root