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ONTOLOGY REPORT - ANNOTATIONS


Term:long-chain fatty acid binding
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Accession:GO:0036041 term browser browse the term
Definition:Binding to a long-chain fatty acid. A long-chain fatty acid is a fatty acid with a chain length between C13 and C22.



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long-chain fatty acid binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FABP2 fatty acid binding protein 2 enables IDA
IBA
IEA
(PMID:7883976)
(PMID:21873635)
GO_Central
GO_Central
Ensembl
PMID:7883976 PMID:21873635 GO_REF:0000107 NCBI chr 4:119,317,250...119,322,138
Ensembl chr 4:119,317,250...119,322,138
JBrowse link
G FABP3 fatty acid binding protein 3 enables IDA
IBA
(PMID:3421901)
(PMID:21873635)
BHF-UCL
BHF-UCL
GO_Central
GO_Central
PMID:3421901 PMID:21873635 NCBI chr 1:31,359,588...31,373,076
Ensembl chr 1:31,365,253...31,376,850
JBrowse link
G FABP4 fatty acid binding protein 4 enables ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 8:81,478,419...81,483,233
Ensembl chr 8:81,478,419...81,483,236
JBrowse link
G PRR7 proline rich 7, synaptic enables IMP (PMID:21460222) UniProt
UniProt
PMID:21460222 NCBI chr 5:177,445,995...177,456,286
Ensembl chr 5:177,446,445...177,456,286
JBrowse link
G RIDA reactive intermediate imine deaminase A homolog enables IEA
ISO
Ensembl
Ensembl
RGD
PMID:10101265 GO_REF:0000107 RGD:9685549 NCBI chr 8:98,102,344...98,117,171
Ensembl chr 8:98,102,344...98,117,171
JBrowse link
G UCP1 uncoupling protein 1 enables ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000104 GO_REF:0000107 NCBI chr 4:140,559,431...140,568,961
Ensembl chr 4:140,559,431...140,568,961
JBrowse link
5(S)-hydroxyperoxy-6E,8Z,11Z,14Z-icosatetraenoic acid binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OXER1 oxoeicosanoid receptor 1 enables IDA (PMID:12065583) UniProt
UniProt
PMID:12065583 NCBI chr 2:42,762,499...42,764,135
Ensembl chr 2:42,762,499...42,764,135
JBrowse link
5-hydroxy-6E,8Z,11Z,14Z-icosatetraenoic acid binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OXER1 oxoeicosanoid receptor 1 enables IDA (PMID:12065583) UniProt
UniProt
PMID:12065583 NCBI chr 2:42,762,499...42,764,135
Ensembl chr 2:42,762,499...42,764,135
JBrowse link
5-oxo-6E,8Z,11Z,14Z-icosatetraenoic acid binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OXER1 oxoeicosanoid receptor 1 enables IDA (PMID:12065583) UniProt
UniProt
PMID:12065583 NCBI chr 2:42,762,499...42,764,135
Ensembl chr 2:42,762,499...42,764,135
JBrowse link
arachidonic acid binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALOX5AP arachidonate 5-lipoxygenase activating protein enables IDA (PMID:8440384) UniProt
UniProt
PMID:8440384 NCBI chr13:30,713,485...30,764,426
Ensembl chr13:30,713,478...30,764,426
JBrowse link
G CYP4F12 cytochrome P450 family 4 subfamily F member 12 ISO RGD PMID:14634044 RGD:2301710 NCBI chr19:15,673,087...15,697,174
Ensembl chr19:15,673,018...15,697,174
JBrowse link
G GPR31 G protein-coupled receptor 31 enables IDA (PMID:21712392) UniProt
UniProt
PMID:21712392 NCBI chr 6:167,155,247...167,157,980
Ensembl chr 6:167,155,247...167,157,980
JBrowse link
G HNF4A hepatocyte nuclear factor 4 alpha ISO RGD PMID:11940586 RGD:625581 NCBI chr20:44,355,699...44,434,596
Ensembl chr20:44,355,700...44,432,845
JBrowse link
G PPARG peroxisome proliferator activated receptor gamma enables ISS (PMID:9568715) BHF-UCL
BHF-UCL
PMID:9568715 NCBI chr 3:12,287,368...12,434,344
Ensembl chr 3:12,287,368...12,434,356
JBrowse link
G S100A8 S100 calcium binding protein A8 enables TAS
IEA
(PMID:22489132) UniProt
UniProt
InterPro
PMID:22489132 GO_REF:0000002 NCBI chr 1:153,390,032...153,422,583
Ensembl chr 1:153,390,032...153,391,073
JBrowse link
G S100A9 S100 calcium binding protein A9 enables TAS (PMID:22489132) UniProt
UniProt
PMID:22489132 NCBI chr 1:153,357,854...153,361,023
Ensembl chr 1:153,357,854...153,361,023
JBrowse link
G SNCA synuclein alpha enables ISO (MGI:3629421|PMID:16734431) MGI PMID:16734431 MGI:3629421 NCBI chr 4:89,724,099...89,838,304
Ensembl chr 4:89,700,345...89,838,315
JBrowse link
G STX3 syntaxin 3 enables ISS HGNC-UCL
HGNC-UCL
GO_REF:0000024 NCBI chr11:59,754,188...59,805,878
Ensembl chr11:59,713,456...59,805,882
JBrowse link
icosatetraenoic acid binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FABP3 fatty acid binding protein 3 ISO RGD PMID:11170430 RGD:1582405 NCBI chr 1:31,359,588...31,373,076
Ensembl chr 1:31,365,253...31,376,850
JBrowse link
linoleic acid binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PPARD peroxisome proliferator activated receptor delta enables IDA (PMID:10198642) UniProt
UniProt
PMID:10198642 NCBI chr 6:35,342,558...35,428,178
Ensembl chr 6:35,342,558...35,428,191
JBrowse link
stearic acid binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HNF4A hepatocyte nuclear factor 4 alpha ISO RGD PMID:11940586 RGD:625581 NCBI chr20:44,355,699...44,434,596
Ensembl chr20:44,355,700...44,432,845
JBrowse link
G PITPNA phosphatidylinositol transfer protein alpha enables IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr17:1,517,718...1,562,792
Ensembl chr17:1,517,718...1,562,792
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 19332
    binding 17677
      lipid binding 875
        fatty acid binding 58
          long-chain fatty acid binding 18
            5(S)-hydroxyperoxy-6E,8Z,11Z,14Z-icosatetraenoic acid binding 1
            5-hydroxy-6E,8Z,11Z,14Z-icosatetraenoic acid binding 1
            5-oxo-6E,8Z,11Z,14Z-icosatetraenoic acid binding 1
            icosatetraenoic acid binding + 10
            isopentadecanoic acid binding 0
            linoleic acid binding 1
            stearic acid binding 2
Path 2
Term Annotations click to browse term
  molecular_function 19332
    binding 17677
      ion binding 6280
        anion binding 2535
          carboxylic acid binding 209
            monocarboxylic acid binding 98
              fatty acid binding 58
                long-chain fatty acid binding 18
                  5(S)-hydroxyperoxy-6E,8Z,11Z,14Z-icosatetraenoic acid binding 1
                  5-hydroxy-6E,8Z,11Z,14Z-icosatetraenoic acid binding 1
                  5-oxo-6E,8Z,11Z,14Z-icosatetraenoic acid binding 1
                  icosatetraenoic acid binding + 10
                  isopentadecanoic acid binding 0
                  linoleic acid binding 1
                  stearic acid binding 2
paths to the root