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ONTOLOGY REPORT - ANNOTATIONS

Term:long-chain fatty acid binding
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Accession:GO:0036041 term browser browse the term
Definition:Binding to a long-chain fatty acid. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.
Comment:While there is not universal consensus on the lengths of short-, medium-, long- and very-long-chain fatty acids, the GO uses the definitions in ChEBI (see CHEBI:26666, CHEBI:59554, CHEBI:15904 and CHEBI:27283).


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long-chain fatty acid binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENSRNOG00000065942 enables IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr 5:15,110,122...15,110,940 JBrowse link
G Fabp2 fatty acid binding protein 2 enables ISO
IBA
IEA
IDA		 (PMID:7883976)
GO_REF:0000033
GO_REF:0000118
PMID:9063893		 RGD
GO_Central
TreeGrafter		 PMID:7883976 PMID:9063893 GO_REF:0000033 GO_REF:0000118, RGD:12793034 NCBI chr 2:211,040,032...211,044,089
Ensembl chr 2:211,040,032...211,044,089 		JBrowse link
G Fabp3 fatty acid binding protein 3 enables ISO
IEA
IBA		 (PMID:3421901)
GO_REF:0000118
GO_REF:0000033		 RGD
TreeGrafter
GO_Central		 PMID:3421901 GO_REF:0000033 GO_REF:0000118 NCBI chr 5:142,651,962...142,658,707
Ensembl chr 5:142,651,956...142,658,718 		JBrowse link
G Fabp4 fatty acid binding protein 4 enables ISS
ISO		 GO_REF:0000024
(MGI:6158968|PMID:12077340)		 UniProt
RGD		 PMID:12077340 GO_REF:0000024 MGI:6158968 NCBI chr 2:91,580,879...91,585,567
Ensembl chr 2:91,580,885...91,585,578 		JBrowse link
G Fabp9 fatty acid binding protein 9 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:91,591,842...91,595,873
Ensembl chr 2:91,592,298...91,595,873 		JBrowse link
G Prr7 proline rich 7 (synaptic) enables ISO
ISS		 (PMID:21460222)
GO_REF:0000024		 RGD
UniProt		 PMID:21460222 GO_REF:0000024 NCBI chr17:9,164,375...9,173,669
Ensembl chr17:9,165,269...9,172,536 		JBrowse link
G Rida reactive intermediate imine deaminase A homolog IDA RGD PMID:10101265 RGD:9685549 NCBI chr 7:65,691,429...65,705,257
Ensembl chr 7:65,691,435...65,705,716 		JBrowse link
G Ucp1 uncoupling protein 1 enables ISS
ISO		 GO_REF:0000024
(PMID:28781081)
(MGI:5444314|PMID:23063128)		 UniProt
RGD		 PMID:23063128 PMID:28781081 GO_REF:0000024 MGI:5444314 NCBI chr19:24,808,782...24,816,853
Ensembl chr19:24,808,783...24,816,852 		JBrowse link
arachidonic acid binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox5ap arachidonate 5-lipoxygenase activating protein enables ISS
ISO		 GO_REF:0000024
(PMID:8440384)		 UniProt
RGD		 PMID:8440384 GO_REF:0000024 NCBI chr12:5,748,941...5,772,986
Ensembl chr12:5,748,944...5,772,986 		JBrowse link
G Cyp4a2 cytochrome P450, family 4, subfamily a, polypeptide 2 IDA RGD PMID:10620324 RGD:1625566 NCBI chr 5:128,922,355...128,934,188
Ensembl chr 5:128,923,615...128,934,165 		JBrowse link
G Cyp4f1 cytochrome P450, family 4, subfamily f, polypeptide 1 IDA RGD PMID:14634044 RGD:2301710 NCBI chr 7:12,010,850...12,022,497
Ensembl chr 7:12,010,852...12,022,046 		JBrowse link
G Gpr31 G protein-coupled receptor 31 enables ISO (PMID:21712392) RGD PMID:21712392 NCBI chr 1:52,926,953...52,927,912 JBrowse link
G Hnf4a hepatocyte nuclear factor 4, alpha IDA RGD PMID:11940586 RGD:625581 NCBI chr 3:152,186,787...152,248,320
Ensembl chr 3:152,186,787...152,248,320 		JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma enables ISO (MGI:3793920|PMID:9568715) RGD PMID:9568715 MGI:3793920 NCBI chr 4:148,423,102...148,548,471
Ensembl chr 4:148,423,194...148,548,468 		JBrowse link
G Snca synuclein alpha enables ISO (PMID:16734431) RGD PMID:16734431 NCBI chr 4:89,696,420...89,797,240
Ensembl chr 4:89,696,420...89,796,262 		JBrowse link
G Stx3 syntaxin 3 enables IDA PMID:16598260 HGNC-UCL PMID:16598260 RGD:8553500 NCBI chr 1:208,617,018...208,686,240
Ensembl chr 1:208,639,115...208,685,805 		JBrowse link
G Tmem175 transmembrane protein 175 enables ISS
ISO		 GO_REF:0000024
(PMID:35750034)		 UniProt
RGD		 PMID:35750034 GO_REF:0000024 NCBI chr14:1,073,410...1,089,764
Ensembl chr14:1,073,523...1,089,819 		JBrowse link
icosatetraenoic acid binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fabp3 fatty acid binding protein 3 IPI RGD PMID:11170430 RGD:1582405 NCBI chr 5:142,651,962...142,658,707
Ensembl chr 5:142,651,956...142,658,718 		JBrowse link
linoleic acid binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ppard peroxisome proliferator-activated receptor delta enables ISO (PMID:10198642) RGD PMID:10198642 NCBI chr20:6,298,785...6,363,970
Ensembl chr20:6,298,785...6,363,968 		JBrowse link
oleic acid binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd36 CD36 molecule IDA RGD PMID:8320718 RGD:6893566 NCBI chr 4:17,317,343...17,410,084
Ensembl chr 4:17,354,466...17,513,903 		JBrowse link
G Fabp1 fatty acid binding protein 1 IPI RGD PMID:1939124 RGD:1626448 NCBI chr 4:103,191,015...103,194,791
Ensembl chr 4:103,191,006...103,194,788 		JBrowse link
G Fabp3 fatty acid binding protein 3 enables ISO (PMID:3421901) RGD PMID:3421901 NCBI chr 5:142,651,962...142,658,707
Ensembl chr 5:142,651,956...142,658,718 		JBrowse link
G Scp2 sterol carrier protein 2 enables ISO (PMID:18465878) RGD PMID:18465878 NCBI chr 5:122,806,949...122,881,259
Ensembl chr 5:122,776,549...122,881,287 		JBrowse link
stearic acid binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnf4a hepatocyte nuclear factor 4, alpha IDA RGD PMID:11940586 RGD:625581 NCBI chr 3:152,186,787...152,248,320
Ensembl chr 3:152,186,787...152,248,320 		JBrowse link
G Pitpna phosphatidylinositol transfer protein, alpha enables IDA PMID:12641450 UniProt PMID:12641450 RGD:8553638 NCBI chr10:60,430,712...60,473,564
Ensembl chr10:60,430,748...60,471,342 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 21010
    binding 18037
      lipid binding 901
        fatty acid binding 57
          long-chain fatty acid binding 22
            5(S)-hydroxyperoxy-6E,8Z,11Z,14Z-icosatetraenoic acid binding 0
            5-hydroxy-6E,8Z,11Z,14Z-icosatetraenoic acid binding 0
            5-oxo-6E,8Z,11Z,14Z-icosatetraenoic acid binding 0
            icosatetraenoic acid binding + 10
            isopentadecanoic acid binding 0
            linoleic acid binding 1
            oleic acid binding 4
            stearic acid binding 2
Path 2
Term Annotations click to browse term
  molecular_function 21010
    binding 18037
      small molecule binding 6207
        ion binding 5911
          anion binding 2542
            carboxylic acid binding 206
              monocarboxylic acid binding 92
                fatty acid binding 57
                  long-chain fatty acid binding 22
                    5(S)-hydroxyperoxy-6E,8Z,11Z,14Z-icosatetraenoic acid binding 0
                    5-hydroxy-6E,8Z,11Z,14Z-icosatetraenoic acid binding 0
                    5-oxo-6E,8Z,11Z,14Z-icosatetraenoic acid binding 0
                    icosatetraenoic acid binding + 10
                    isopentadecanoic acid binding 0
                    linoleic acid binding 1
                    oleic acid binding 4
                    stearic acid binding 2
paths to the root