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ONTOLOGY REPORT - ANNOTATIONS


Term:long-chain fatty acid binding
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Accession:GO:0036041 term browser browse the term
Definition:Interacting selectively and non-covalently with a long-chain fatty acid. A long-chain fatty acid is a fatty acid with a chain length between C13 and C22.


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long-chain fatty acid binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fabp2 fatty acid binding protein 2 enables IDA
IEA
ISO
PMID:9063893
GO_REF:0000107
(PMID:7883976)
Ensembl
RGD
PMID:7883976, PMID:9063893, PMID:9063893 GO_REF:0000107, RGD:12793034, RGD:12793034 NCBI chr 2:227,080,912...227,083,654
Ensembl chr 2:227,080,924...227,083,501
JBrowse link
G Fabp3 fatty acid binding protein 3 enables ISO (PMID:3421901) RGD PMID:3421901 NCBI chr 5:148,528,854...148,535,597
Ensembl chr 5:148,528,725...148,535,565
JBrowse link
G Fabp4 fatty acid binding protein 4 enables ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:6158968|PMID:12077340)
UniProt
Ensembl
RGD
PMID:12077340 GO_REF:0000024 GO_REF:0000107 MGI:6158968 NCBI chr 2:93,792,666...93,797,267
Ensembl chr 2:93,792,601...93,797,305
JBrowse link
G LOC100909612 mitochondrial brown fat uncoupling protein 1-like enables IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr19:29,395,702...29,400,389
Ensembl chr19:29,396,157...29,400,355
JBrowse link
G Prr7 proline rich 7 (synaptic) enables ISS
ISO
GO_REF:0000024
(PMID:21460222)
UniProt
RGD
PMID:21460222 GO_REF:0000024 NCBI chr17:9,693,274...9,702,795
Ensembl chr17:9,694,168...9,695,292
JBrowse link
G Rida reactive intermediate imine deaminase A homolog IDA RGD PMID:10101265 RGD:9685549 NCBI chr 7:73,256,506...73,270,308
Ensembl chr 7:73,256,508...73,270,308
JBrowse link
G Ucp1 uncoupling protein 1 enables ISS
ISO
GO_REF:0000024
(MGI:5444314|PMID:23063128)
UniProt
RGD
PMID:23063128 GO_REF:0000024 MGI:5444314 NCBI chr19:24,456,976...24,464,808
Ensembl chr19:24,456,976...24,464,807
JBrowse link
arachidonic acid binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox5ap arachidonate 5-lipoxygenase activating protein enables ISO
ISS
(PMID:8440384)
GO_REF:0000024
RGD
UniProt
PMID:8440384 GO_REF:0000024 NCBI chr12:6,854,930...6,879,112
Ensembl chr12:6,854,920...6,879,154
JBrowse link
G Cyp4a2 cytochrome P450, family 4, subfamily a, polypeptide 2 IDA RGD PMID:10620324 RGD:1625566 NCBI chr 5:134,196,910...134,207,888
Ensembl chr 5:134,196,912...134,207,863
JBrowse link
G Cyp4f1 cytochrome P450, family 4, subfamily f, polypeptide 1 IDA RGD PMID:14634044 RGD:2301710 NCBI chr 7:15,179,472...15,191,113
Ensembl chr 7:15,179,467...15,190,796
JBrowse link
G Gpr31 G protein-coupled receptor 31 enables ISO (PMID:21712392) RGD PMID:21712392 NCBI chr 1:53,519,829...53,520,788
Ensembl chr 1:53,519,829...53,520,788
JBrowse link
G Hnf4a hepatocyte nuclear factor 4, alpha IDA RGD PMID:11940586 RGD:625581 NCBI chr 3:159,902,441...159,965,003
Ensembl chr 3:159,902,441...159,965,003
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma ISO (MGI:3793920|PMID:9568715) RGD PMID:9568715 MGI:3793920 NCBI chr 4:147,274,055...147,399,383
Ensembl chr 4:147,274,107...147,399,380
JBrowse link
G S100a8 S100 calcium binding protein A8 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:190,073,239...190,074,333
Ensembl chr 2:190,073,815...190,074,354
JBrowse link
G Snca synuclein alpha ISO (MGI:3629421|PMID:16734431) RGD PMID:16734431 MGI:3629421 NCBI chr 4:90,782,412...90,883,236
Ensembl chr 4:90,782,374...90,882,285
JBrowse link
G Stx3 syntaxin 3 enables IDA PMID:16598260 HGNC
HGNC-UCL
PMID:16598260, PMID:16598260 RGD:8553500, RGD:8553500 NCBI chr 1:228,137,781...228,195,004
Ensembl chr 1:228,149,867...228,194,977
JBrowse link
icosatetraenoic acid binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fabp3 fatty acid binding protein 3 IPI RGD PMID:11170430 RGD:1582405 NCBI chr 5:148,528,854...148,535,597
Ensembl chr 5:148,528,725...148,535,565
JBrowse link
linoleic acid binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ppard peroxisome proliferator-activated receptor delta enables ISO (PMID:10198642) RGD PMID:10198642 NCBI chr20:7,818,289...7,883,482
Ensembl chr20:7,818,289...7,885,333
JBrowse link
stearic acid binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnf4a hepatocyte nuclear factor 4, alpha IDA RGD PMID:11940586 RGD:625581 NCBI chr 3:159,902,441...159,965,003
Ensembl chr 3:159,902,441...159,965,003
JBrowse link
G Pitpna phosphatidylinositol transfer protein, alpha enables IDA PMID:12641450 UniProt PMID:12641450, PMID:12641450 RGD:8553638, RGD:8553638 NCBI chr10:63,731,767...63,772,049
Ensembl chr10:63,731,767...63,772,049
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 20509
    binding 17316
      lipid binding 797
        fatty acid binding 51
          long-chain fatty acid binding 18
            5(S)-hydroxyperoxy-6E,8Z,11Z,14Z-icosatetraenoic acid binding 0
            5-hydroxy-6E,8Z,11Z,14Z-icosatetraenoic acid binding 0
            5-oxo-6E,8Z,11Z,14Z-icosatetraenoic acid binding 0
            icosatetraenoic acid binding + 10
            isopentadecanoic acid binding 0
            linoleic acid binding 1
            stearic acid binding 2
Path 2
Term Annotations click to browse term
  molecular_function 20509
    binding 17316
      ion binding 5371
        anion binding 2415
          carboxylic acid binding 190
            monocarboxylic acid binding 87
              fatty acid binding 51
                long-chain fatty acid binding 18
                  5(S)-hydroxyperoxy-6E,8Z,11Z,14Z-icosatetraenoic acid binding 0
                  5-hydroxy-6E,8Z,11Z,14Z-icosatetraenoic acid binding 0
                  5-oxo-6E,8Z,11Z,14Z-icosatetraenoic acid binding 0
                  icosatetraenoic acid binding + 10
                  isopentadecanoic acid binding 0
                  linoleic acid binding 1
                  stearic acid binding 2
paths to the root