ONTOLOGY REPORT - ANNOTATIONS
Term: ciliary transition zone
Accession: GO:0035869
browse the term
Definition: A region of the cilium between the basal body and proximal segment that is characterized by Y-shaped assemblages that connect axonemal microtubules to the ciliary membrane. The ciliary transition zone appears to function as a gate that controls ciliary membrane composition and separates the cytosol from the ciliary plasm.
Comment: Depending on the species, this region may have a distinct geometrically shaped electron-dense structure within the axonemal lumen visible in electron microscopy images; most animals don't display this inner structure. The axoneme extends through the ciliary transition zone, but only consists of the outer doublets. The central pair, axonemal spokes, and dynein complexes are not found in this part of the ciliary shaft. Note that the connecting cilium of the photoreceptor cells is thought to be equivalent to the transition zone.
Synonyms: exact_synonym: cilial transition zone; cilium transition zone
related_synonym: connecting cilium
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Arl3
ADP ribosylation factor like GTPase 3
located_in
ISO
(PMID:26455799)
RGD
PMID:26455799
NCBI chr 1:245,400,659...245,446,673
Ensembl chr 1:245,400,550...245,446,820
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B9d1
B9 domain containing 1
located_in
ISS ISO
GO_REF:0000024 (PMID:22179047)
UniProt RGD
PMID:22179047
GO_REF:0000024
NCBI chr10:46,186,222...46,196,309
Ensembl chr10:46,186,691...46,196,008
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B9d2
B9 domain containing 2
located_in
ISO
(PMID:15916950), (PMID:19208769), (PMID:21422230), (PMID:21763481)
RGD
PMID:15916950 PMID:19208769 PMID:21422230 PMID:21763481
NCBI chr 1:81,189,395...81,195,383
Ensembl chr 1:81,189,405...81,195,356
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Bbs4
Bardet-Biedl syndrome 4
located_in
ISO
(PMID:23943788)
RGD
PMID:23943788
NCBI chr 8:59,731,912...59,765,408
Ensembl chr 8:59,731,912...59,765,607
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Bbs9
Bardet-Biedl syndrome 9
located_in
ISO
(PMID:23943788)
RGD
PMID:23943788
NCBI chr 8:21,013,865...21,437,934
Ensembl chr 8:21,013,944...21,437,930
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Cc2d2a
coiled-coil and C2 domain containing 2A
is_active_in located_in
IBA ISO
GO_REF:0000033 (PMID:22179047), (PMID:24947469)
GO_Central RGD
PMID:22179047 PMID:24947469
GO_REF:0000033
NCBI chr14:67,349,004...67,435,883
Ensembl chr14:67,351,353...67,435,949
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Ccdc66
coiled-coil domain containing 66
NOT|located_in
ISO
(PMID:28235840)
RGD
PMID:28235840
NCBI chr16:2,662,125...2,694,031
Ensembl chr16:2,662,131...2,694,023
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Ccsap
centriole, cilia and spindle-associated protein
located_in is_active_in
ISO IBA
(PMID:22493317) GO_REF:0000033
RGD GO_Central
PMID:22493317
GO_REF:0000033
NCBI chr19:51,824,954...51,843,469
Ensembl chr19:51,826,994...51,842,753
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Cdkl1
cyclin dependent kinase like 1
located_in
ISS
GO_REF:0000024
UniProt
GO_REF:0000024
NCBI chr 6:88,224,154...88,273,434
Ensembl chr 6:88,224,143...88,270,276
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Cep131
centrosomal protein 131
located_in
ISO
(PMID:24415959)
RGD
PMID:24415959
NCBI chr10:105,346,015...105,370,380
Ensembl chr10:105,346,015...105,370,380
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Cep290
centrosomal protein 290
located_in is_active_in
ISO IBA
(PMID:23943788) (PMID:22446187) GO_REF:0000033
RGD GO_Central
PMID:22446187 PMID:23943788
GO_REF:0000033
NCBI chr 7:35,310,071...35,399,388
Ensembl chr 7:35,310,199...35,399,392
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Cetn3
centrin 3
located_in
ISO
(PMID:22031837)
RGD
PMID:22031837
NCBI chr 2:12,089,025...12,101,828
Ensembl chr 2:12,089,226...12,101,828
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Cfap36
cilia and flagella associated protein 36
located_in
ISO
(PMID:26455799)
RGD
PMID:26455799
NCBI chr14:102,966,006...102,991,693
Ensembl chr14:102,966,001...102,991,555
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Cfap53
cilia and flagella associated protein 53
located_in
ISO
(PMID:26538025)
RGD
PMID:26538025
NCBI chr18:67,884,651...67,955,873
Ensembl chr18:67,869,855...67,952,318
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Cibar1
CBY1 interacting BAR domain containing 1
is_active_in located_in
IBA ISO
GO_REF:0000033 (PMID:29459677)
GO_Central RGD
PMID:29459677
GO_REF:0000033
NCBI chr 5:25,613,993...25,632,440
Ensembl chr 5:25,614,033...25,632,489
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Cibar2
CBY1 interacting BAR domain containing 2
is_active_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr19:48,217,617...48,229,418
Ensembl chr19:48,215,486...48,229,404
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Cplane1
ciliogenesis and planar polarity effector complex subunit 1
is_active_in located_in
IBA ISO
GO_REF:0000033 (PMID:25877302)
GO_Central RGD
PMID:25877302
GO_REF:0000033
NCBI chr 2:57,269,195...57,369,580
Ensembl chr 2:57,268,884...57,369,500
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Cplane2
ciliogenesis and planar polarity effector complex subunit 2
located_in
ISO
(PMID:29038301)
RGD
PMID:29038301
NCBI chr 5:153,515,507...153,516,455
Ensembl chr 5:153,515,376...153,522,508
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Dync2li1
dynein cytoplasmic 2 light intermediate chain 1
located_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:26130459)
UniProt Ensembl RGD
PMID:26130459
GO_REF:0000024 GO_REF:0000107
NCBI chr 6:9,992,537...10,025,355
Ensembl chr 6:9,992,541...10,025,336
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Intu
inturned planar cell polarity protein
located_in
IEA ISO
GO_REF:0000107 (PMID:29038301)
Ensembl RGD
PMID:29038301
GO_REF:0000107
NCBI chr 2:123,600,972...123,685,331
Ensembl chr 2:123,609,807...123,682,676
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Kifap3
kinesin-associated protein 3
is_active_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr13:76,127,702...76,264,654
Ensembl chr13:76,127,696...76,264,650
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Macir
macrophage immunometabolism regulator
located_in
ISO
(PMID:22085962)
RGD
PMID:22085962
NCBI chr 9:98,420,760...98,440,818
Ensembl chr 9:98,420,376...98,441,733
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Mks1
MKS transition zone complex subunit 1
located_in
ISO
(PMID:21725307), (PMID:24302887)
RGD
PMID:21725307 PMID:24302887
NCBI chr10:72,655,921...72,667,007
Ensembl chr10:72,655,921...72,666,655
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Nek4
NIMA-related kinase 4
IDA
RGD
PMID:21685204
RGD:13204813
NCBI chr16:6,144,900...6,185,376
Ensembl chr16:6,144,959...6,188,932
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Nphp1
nephrocystin 1
located_in
ISO
(PMID:20169535), (PMID:21565611), (PMID:24302887)
RGD
PMID:20169535 PMID:21565611 PMID:24302887
NCBI chr 3:114,960,650...115,016,234
Ensembl chr 3:114,960,650...115,016,234
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Nphp4
nephrocystin 4
is_active_in located_in
IBA ISO
GO_REF:0000033 (PMID:20169535)
GO_Central RGD
PMID:20169535
GO_REF:0000033
NCBI chr 5:162,986,157...163,073,708
Ensembl chr 5:162,988,370...163,073,706
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Pcm1
pericentriolar material 1
located_in
ISO
(PMID:24415959)
RGD
PMID:24415959
NCBI chr16:51,008,315...51,105,261
Ensembl chr16:51,008,315...51,105,091
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Rpgrip1
RPGR interacting protein 1
IDA
RGD
PMID:21685204
RGD:13204813
NCBI chr15:24,814,576...24,867,522
Ensembl chr15:24,814,614...24,868,605
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Rpgrip1l
Rpgrip1-like
located_in
IDA ISO
(PMID:22927466), (PMID:29487109) (PMID:26595381)
RGD
PMID:22927466 PMID:26595381 PMID:29487109 PMID:21685204
RGD:13204813
NCBI chr19:15,692,189...15,785,083
Ensembl chr19:15,692,150...15,785,083
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Septin2
septin 2
located_in
ISO
(PMID:24302887)
RGD
PMID:24302887
NCBI chr 9:94,018,141...94,051,386
Ensembl chr 9:94,018,208...94,051,386
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Tctn1
tectonic family member 1
located_in
ISO
(PMID:21725307)
RGD
PMID:21725307
NCBI chr12:34,309,795...34,347,190
Ensembl chr12:34,309,897...34,342,267
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Tctn2
tectonic family member 2
located_in
ISO
(PMID:29487109)
RGD
PMID:29487109
NCBI chr12:31,982,440...32,007,242
Ensembl chr12:31,822,733...32,007,069
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Tmem107
transmembrane protein 107
located_in
ISS ISO
GO_REF:0000024 (PMID:26518474) (PMID:26595381)
UniProt RGD
PMID:26518474 PMID:26595381
GO_REF:0000024
NCBI chr10:53,772,153...53,774,685
Ensembl chr10:53,771,784...53,774,676
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Tmem17
transmembrane protein 17
located_in is_active_in
ISS ISO IBA
GO_REF:0000024 (PMID:22179047) GO_REF:0000033
UniProt RGD GO_Central
PMID:22179047
GO_REF:0000024 GO_REF:0000033
NCBI chr14:96,483,648...96,524,238
Ensembl chr14:96,518,793...96,524,233
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Tmem216
transmembrane protein 216
is_active_in located_in
IBA ISO
GO_REF:0000033 (PMID:21725307)
GO_Central RGD
PMID:21725307
GO_REF:0000033
NCBI chr 1:207,196,454...207,201,704
Ensembl chr 1:207,196,454...207,201,754
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Tmem231
transmembrane protein 231
located_in is_active_in
ISS ISO IBA
GO_REF:0000024 (PMID:22179047) GO_REF:0000033
UniProt RGD GO_Central
PMID:22179047
GO_REF:0000024 GO_REF:0000033
NCBI chr19:39,883,077...39,904,296
Ensembl chr19:39,883,077...39,904,269
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Tmem237
transmembrane protein 237
located_in is_active_in
ISO IBA
(PMID:22152675) GO_REF:0000033
RGD GO_Central
PMID:22152675
GO_REF:0000033
NCBI chr 9:60,533,348...60,569,253
Ensembl chr 9:60,535,233...60,572,567
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Tmem67
transmembrane protein 67
located_in is_active_in
ISO IBA
(PMID:26595381) GO_REF:0000033
RGD GO_Central
PMID:26595381
GO_REF:0000033
NCBI chr 5:25,536,458...25,589,378
Ensembl chr 5:25,536,458...25,589,334
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Tmem80
transmembrane protein 80
is_active_in located_in
IBA ISO
GO_REF:0000033 (PMID:26982032)
GO_Central RGD
PMID:26982032
GO_REF:0000033
NCBI chr 1:196,435,999...196,444,368
Ensembl chr 1:196,436,003...196,444,367 Ensembl chr 1:196,436,003...196,444,367
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Traf3ip1
TRAF3 interacting protein 1
located_in
ISO ISS IEA
(PMID:26487268) GO_REF:0000024 GO_REF:0000107
RGD UniProt Ensembl
PMID:26487268
GO_REF:0000024 GO_REF:0000107
NCBI chr 9:92,073,622...92,110,427
Ensembl chr 9:92,073,640...92,108,977
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Ttbk2
tau tubulin kinase 2
located_in is_active_in
ISO IBA
(PMID:23141541) (PMID:23141541), (PMID:29038301) GO_REF:0000033
RGD GO_Central
PMID:23141541 PMID:29038301
GO_REF:0000033
NCBI chr 3:107,691,123...107,802,911
Ensembl chr 3:107,697,340...107,803,223
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Unc119b
unc-119 lipid binding chaperone B
located_in
ISO
(PMID:22085962)
RGD
PMID:22085962
NCBI chr12:41,478,808...41,491,432
Ensembl chr12:41,478,808...41,491,432
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Adcy3
adenylate cyclase 3
IDA
MMO:0000538
RGD
PMID:7861185
RGD:407570624
NCBI chr 6:27,100,089...27,203,686
Ensembl chr 6:27,124,828...27,203,686
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Gnal
G protein subunit alpha L
IDA
MMO:0000538
RGD
PMID:7861185
RGD:407570624
NCBI chr18:60,622,311...60,762,599
Ensembl chr18:60,622,311...60,762,599
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Ahi1
Abelson helper integration site 1
part_of
ISS ISO
GO_REF:0000024 (PMID:22179047)
UniProt RGD
PMID:22179047
GO_REF:0000024
NCBI chr 1:15,762,485...15,891,213
Ensembl chr 1:15,762,462...15,891,041
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B9d1
B9 domain containing 1
part_of
ISS ISO IBA
GO_REF:0000024 (PMID:21725307), (PMID:22179047) GO_REF:0000033
UniProt RGD GO_Central
PMID:21725307 PMID:22179047
GO_REF:0000024 GO_REF:0000033
NCBI chr10:46,186,222...46,196,309
Ensembl chr10:46,186,691...46,196,008
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B9d2
B9 domain containing 2
part_of
ISS ISO IBA
GO_REF:0000024 (PMID:22179047) GO_REF:0000033
UniProt RGD GO_Central
PMID:22179047
GO_REF:0000024 GO_REF:0000033
NCBI chr 1:81,189,395...81,195,383
Ensembl chr 1:81,189,405...81,195,356
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Cc2d2a
coiled-coil and C2 domain containing 2A
part_of
ISO
(PMID:21725307), (PMID:22179047)
RGD
PMID:21725307 PMID:22179047
NCBI chr14:67,349,004...67,435,883
Ensembl chr14:67,351,353...67,435,949
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Cep290
centrosomal protein 290
part_of
ISO
(PMID:21725307)
RGD
PMID:21725307
NCBI chr 7:35,310,071...35,399,388
Ensembl chr 7:35,310,199...35,399,392
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Kctd10
potassium channel tetramerization domain containing 10
part_of
ISO
(PMID:22179047)
RGD
PMID:22179047
NCBI chr12:42,230,159...42,248,792
Ensembl chr12:42,230,269...42,248,783
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Mks1
MKS transition zone complex subunit 1
part_of
ISS ISO IBA IEA
GO_REF:0000024 (PMID:21725307), (PMID:22179047) GO_REF:0000033 GO_REF:0000107
UniProt RGD GO_Central Ensembl
PMID:21725307 PMID:22179047
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107
NCBI chr10:72,655,921...72,667,007
Ensembl chr10:72,655,921...72,666,655
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Tctn1
tectonic family member 1
part_of
IBA ISO
GO_REF:0000033 (PMID:21725307), (PMID:22179047)
GO_Central RGD
PMID:21725307 PMID:22179047
GO_REF:0000033
NCBI chr12:34,309,795...34,347,190
Ensembl chr12:34,309,897...34,342,267
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Tctn2
tectonic family member 2
part_of
ISS ISO IBA
GO_REF:0000024 (PMID:21725307), (PMID:22179047) GO_REF:0000033
UniProt RGD GO_Central
PMID:21725307 PMID:22179047
GO_REF:0000024 GO_REF:0000033
NCBI chr12:31,982,440...32,007,242
Ensembl chr12:31,822,733...32,007,069
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Tmem107
transmembrane protein 107
part_of
ISO IBA IEA ISS
(PMID:26595381) GO_REF:0000033 GO_REF:0000107 GO_REF:0000024
RGD GO_Central Ensembl UniProt
PMID:26595381
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107
NCBI chr10:53,772,153...53,774,685
Ensembl chr10:53,771,784...53,774,676
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Tmem17
transmembrane protein 17
part_of
ISS ISO
GO_REF:0000024 (PMID:22179047)
UniProt RGD
PMID:22179047
GO_REF:0000024
NCBI chr14:96,483,648...96,524,238
Ensembl chr14:96,518,793...96,524,233
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Tmem216
transmembrane protein 216
part_of
ISS ISO
GO_REF:0000024 (PMID:21725307)
UniProt RGD
PMID:21725307
GO_REF:0000024
NCBI chr 1:207,196,454...207,201,704
Ensembl chr 1:207,196,454...207,201,754
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Tmem231
transmembrane protein 231
part_of
ISS ISO IEA
GO_REF:0000024 (PMID:22179047) GO_REF:0000107
UniProt RGD Ensembl
PMID:22179047
GO_REF:0000024 GO_REF:0000107
NCBI chr19:39,883,077...39,904,296
Ensembl chr19:39,883,077...39,904,269
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Tmem67
transmembrane protein 67
part_of
IEA ISO ISS
GO_REF:0000002 (PMID:21725307) GO_REF:0000024
InterPro RGD UniProt
PMID:21725307
GO_REF:0000002 GO_REF:0000024
NCBI chr 5:25,536,458...25,589,378
Ensembl chr 5:25,536,458...25,589,334
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AC131360.2
located_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
Ensembl chr18:29,185,443...29,187,845
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Adgrv1
adhesion G protein-coupled receptor V1
located_in
ISO
(PMID:17906286)
RGD
PMID:17906286
NCBI chr 2:11,331,434...11,911,713
Ensembl chr 2:11,331,442...11,911,688
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Alpk1
alpha-kinase 1
located_in
ISO
(PMID:30967659)
RGD
PMID:30967659
NCBI chr 2:216,126,939...216,247,180
Ensembl chr 2:216,128,825...216,247,157
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Arl3
ADP ribosylation factor like GTPase 3
located_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:12417528)
UniProt Ensembl RGD
PMID:12417528
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:245,400,659...245,446,673
Ensembl chr 1:245,400,550...245,446,820
G
Bbs4
Bardet-Biedl syndrome 4
located_in
ISO
(PMID:23943788)
RGD
PMID:23943788
NCBI chr 8:59,731,912...59,765,408
Ensembl chr 8:59,731,912...59,765,607
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Cep290
centrosomal protein 290
located_in
ISO
(PMID:16632484), (PMID:16682973), (PMID:23943788)
RGD
PMID:16632484 PMID:16682973 PMID:23943788
NCBI chr 7:35,310,071...35,399,388
Ensembl chr 7:35,310,199...35,399,392
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Cetn1
centrin 1
located_in
ISO
(PMID:15347651), (PMID:30120214)
RGD
PMID:15347651 PMID:30120214
NCBI chr18:651,591...652,293
Ensembl chr18:651,591...652,293
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Cetn2
centrin 2
located_in
ISO
(PMID:15347651)
RGD
PMID:15347651
NCBI chr X:150,769,944...150,774,833
Ensembl chr X:150,769,953...150,774,919
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Cetn3
centrin 3
located_in
ISO
(PMID:15347651), (PMID:22031837), (PMID:24833722)
RGD
PMID:15347651 PMID:22031837 PMID:24833722
NCBI chr 2:12,089,025...12,101,828
Ensembl chr 2:12,089,226...12,101,828
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Cfap410
cilia and flagella associated protein 410
located_in
ISO
(PMID:26974433)
RGD
PMID:26974433
NCBI chr20:10,687,863...10,694,736
Ensembl chr20:10,687,863...10,694,737
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Fam161a
FAM161 centrosomal protein A
located_in is_active_in
IDA ISO IBA IEA
PMID:22940612 (PMID:22791751), (PMID:22940612), (PMID:24833722) GO_REF:0000033 GO_REF:0000107 (PMID:22940612)
RGD GO_Central Ensembl
PMID:22791751 PMID:22940612 PMID:24833722 PMID:22940612
GO_REF:0000033 GO_REF:0000107, RGD:8553427
NCBI chr14:97,009,449...97,027,865
Ensembl chr14:97,009,491...97,028,588
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Gnat1
G protein subunit alpha transducin 1
located_in
ISO
(PMID:17881533)
RGD
PMID:17881533
NCBI chr 8:108,350,935...108,355,671
Ensembl chr 8:108,350,935...108,355,671
G
Ift122
intraflagellar transport 122
located_in
ISO
(PMID:19208653)
RGD
PMID:19208653
NCBI chr 4:148,905,031...148,975,458
Ensembl chr 4:148,905,046...148,975,458
G
Ift140
intraflagellar transport 140
located_in
ISO
(PMID:20368623), (PMID:24619649)
RGD
PMID:20368623 PMID:24619649
NCBI chr10:14,032,665...14,121,682
Ensembl chr10:14,032,648...14,120,433
G
Ift20
intraflagellar transport 20
located_in
ISO
(PMID:31637240) (PMID:21307337)
RGD
PMID:21307337 PMID:31637240
NCBI chr10:63,432,597...63,438,125
Ensembl chr10:63,432,633...63,438,124
G
Ift52
intraflagellar transport 52
located_in
ISO
(PMID:31637240) (PMID:20368623)
RGD
PMID:20368623 PMID:31637240
NCBI chr 3:151,672,505...151,696,975
Ensembl chr 3:151,672,493...151,696,980
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Ift57
intraflagellar transport 57
located_in
ISO
(PMID:31637240) (PMID:20368623)
RGD
PMID:20368623 PMID:31637240
NCBI chr11:51,051,520...51,124,909
Ensembl chr11:51,059,611...51,124,812
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Ift88
intraflagellar transport 88
located_in
ISO
(PMID:19208653), (PMID:20368623)
RGD
PMID:19208653 PMID:20368623
NCBI chr15:31,573,325...31,666,068
Ensembl chr15:31,573,376...31,672,147
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Iqcb1
IQ motif containing B1
located_in
ISO
(PMID:15723066)
RGD
PMID:15723066
NCBI chr11:63,905,595...63,960,141
Ensembl chr11:63,905,590...63,960,093
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Kiaa1549
KIAA1549 homolog
located_in
ISO
(PMID:30120214)
RGD
PMID:30120214
NCBI chr 4:66,840,674...66,968,407
Ensembl chr 4:66,760,162...66,968,436
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Kif17
kinesin family member 17
located_in
ISO
(PMID:19384852)
RGD
PMID:19384852
NCBI chr 5:150,482,288...150,521,471
Ensembl chr 5:150,481,578...150,519,638
G
Kif3a
kinesin family member 3a
located_in
ISO
(PMID:19208653)
RGD
PMID:19208653
NCBI chr10:37,725,930...37,761,183
Ensembl chr10:37,725,970...37,759,191
G
Kifap3
kinesin-associated protein 3
located_in
ISO
(PMID:19384852)
RGD
PMID:19384852
NCBI chr13:76,127,702...76,264,654
Ensembl chr13:76,127,696...76,264,650
G
Lca5
lebercilin LCA5
located_in
ISO IDA
(PMID:21606596) PMID:17546029
RGD
PMID:21606596 PMID:17546029
RGD:14397561
NCBI chr 8:84,307,696...84,375,025
Ensembl chr 8:84,317,659...84,374,956
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Mak
male germ cell-associated kinase
located_in
IEA ISO
GO_REF:0000107 (PMID:21148103)
Ensembl RGD
PMID:21148103
GO_REF:0000107
NCBI chr17:23,683,753...23,731,125
Ensembl chr17:23,693,878...23,730,001
G
Myo7a
myosin VIIA
located_in
ISO
(PMID:10414956)
RGD
PMID:10414956
NCBI chr 1:152,342,611...152,414,171
Ensembl chr 1:152,344,448...152,414,157
G
Nphp1
nephrocystin 1
located_in
ISO
(PMID:16885411)
RGD
PMID:16885411
NCBI chr 3:114,960,650...115,016,234
Ensembl chr 3:114,960,650...115,016,234
G
Nphp4
nephrocystin 4
located_in
ISO
(PMID:21078623)
RGD
PMID:21078623
NCBI chr 5:162,986,157...163,073,708
Ensembl chr 5:162,988,370...163,073,706
G
Pcdhb22
protocadherin beta 22
located_in
ISO
(PMID:18279309)
RGD
PMID:18279309
NCBI chr18:29,223,028...29,229,132
Ensembl chr18:29,223,149...29,225,536
G
Poc5
POC5 centriolar protein
is_active_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 2:27,719,745...27,748,805
Ensembl chr 2:27,719,762...27,748,805
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Rp1
RP1, axonemal microtubule associated
located_in
ISO
(PMID:11767049) (PMID:11773008), (PMID:14507858)
RGD
PMID:11767049 PMID:11773008 PMID:14507858
NCBI chr 5:15,121,104...15,582,363
Ensembl chr 5:15,121,133...15,579,363
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Rp1l1
RP1 like 1
located_in
ISO
(PMID:19657028)
RGD
PMID:19657028
NCBI chr15:38,259,907...38,271,269
Ensembl chr15:38,259,928...38,270,316
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Rpgr
retinitis pigmentosa GTPase regulator
located_in
ISO
(PMID:10725384)
RGD
PMID:10725384
NCBI chr X:12,566,447...12,628,171
Ensembl chr X:12,566,645...12,747,882
G
Rpgrip1
RPGR interacting protein 1
located_in
ISO
(PMID:25398945)
RGD
PMID:25398945
NCBI chr15:24,814,576...24,867,522
Ensembl chr15:24,814,614...24,868,605
G
Rpgrip1l
Rpgrip1-like
is_active_in
IDA IBA
GO_REF:0000033
GO_Central RGD
PMID:17558407
GO_REF:0000033, RGD:11537356
NCBI chr19:15,692,189...15,785,083
Ensembl chr19:15,692,150...15,785,083
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Septin2
septin 2
located_in
ISO IEA
(PMID:23572511) GO_REF:0000107
RGD Ensembl
PMID:23572511
GO_REF:0000107
NCBI chr 9:94,018,141...94,051,386
Ensembl chr 9:94,018,208...94,051,386
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Spata7
spermatogenesis associated 7
located_in
ISS ISO
GO_REF:0000024 (PMID:25398945)
UniProt RGD
PMID:25398945
GO_REF:0000024
NCBI chr 6:117,879,828...117,925,284
Ensembl chr 6:117,879,823...117,925,284
G
Sptbn5
spectrin, beta, non-erythrocytic 5
located_in
ISO
(PMID:23704327)
RGD
PMID:23704327
NCBI chr 3:107,013,783...107,054,878
Ensembl chr 3:107,013,265...107,054,324
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Tbcc
tubulin folding cofactor C
located_in
ISO
(PMID:12417528)
RGD
PMID:12417528
NCBI chr 9:14,098,855...14,100,043
Ensembl chr 9:14,098,868...14,100,042
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Tmem237
transmembrane protein 237
located_in
ISO
(PMID:20375344)
RGD
PMID:20375344
NCBI chr 9:60,533,348...60,569,253
Ensembl chr 9:60,535,233...60,572,567
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Topors
TOP1 binding arginine/serine rich protein, E3 ubiquitin ligase
located_in is_active_in
ISO IBA
(PMID:21159800) GO_REF:0000033
RGD GO_Central
PMID:21159800
GO_REF:0000033
NCBI chr 5:55,388,033...55,399,937
Ensembl chr 5:55,387,632...55,399,937
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Tsga10ip
testis specific 10 interacting protein
is_active_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:202,700,576...202,714,668
Ensembl chr 1:202,700,578...202,714,798
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Ttc8
tetratricopeptide repeat domain 8
located_in
ISO
(PMID:14520415)
RGD
PMID:14520415
NCBI chr 6:118,198,186...118,252,422
Ensembl chr 6:118,198,201...118,252,418
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Ush1g
USH1 protein network component sans
located_in
ISO
(PMID:17906286)
RGD
PMID:17906286
NCBI chr10:100,559,721...100,563,590
Ensembl chr10:100,557,629...100,563,590
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Ush2a
usherin
located_in
IDA ISO IEA
(PMID:17906286), (PMID:21212183) GO_REF:0000107
RGD Ensembl
PMID:17906286 PMID:21212183 PMID:16434480
GO_REF:0000107, RGD:1600128
NCBI chr13:99,837,445...100,503,935
Ensembl chr13:99,837,445...100,503,922
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Wdr19
WD repeat domain 19
located_in
ISO
(PMID:19208653)
RGD
PMID:19208653
NCBI chr14:43,042,474...43,106,337
Ensembl chr14:43,042,478...43,106,288
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Whrn
whirlin
located_in
IDA ISO IEA
(PMID:17906286), (PMID:21212183) GO_REF:0000107
RGD Ensembl
PMID:17906286 PMID:21212183 PMID:16434480
GO_REF:0000107, RGD:1600128
NCBI chr 5:76,828,308...76,911,945
Ensembl chr 5:76,828,301...76,912,223
G
Ahi1
Abelson helper integration site 1
located_in
ISO
(PMID:29899041)
RGD
PMID:29899041
NCBI chr 1:15,762,485...15,891,213
Ensembl chr 1:15,762,462...15,891,041
G
Cep290
centrosomal protein 290
located_in
ISO
(PMID:29899041)
RGD
PMID:29899041
NCBI chr 7:35,310,071...35,399,388
Ensembl chr 7:35,310,199...35,399,392
G
Nphp1
nephrocystin 1
located_in
ISO
(PMID:29899041)
RGD
PMID:29899041
NCBI chr 3:114,960,650...115,016,234
Ensembl chr 3:114,960,650...115,016,234
G
Nphp4
nephrocystin 4
located_in
ISO
(PMID:29899041)
RGD
PMID:29899041
NCBI chr 5:162,986,157...163,073,708
Ensembl chr 5:162,988,370...163,073,706
G
Rpgr
retinitis pigmentosa GTPase regulator
located_in
ISO
(PMID:29899041)
RGD
PMID:29899041
NCBI chr X:12,566,447...12,628,171
Ensembl chr X:12,566,645...12,747,882
G
Rpgrip1
RPGR interacting protein 1
located_in
ISO
(PMID:29899041)
RGD
PMID:29899041
NCBI chr15:24,814,576...24,867,522
Ensembl chr15:24,814,614...24,868,605
G
Spata7
spermatogenesis associated 7
located_in is_active_in
IEA IBA ISO
GO_REF:0000107 GO_REF:0000033 MGI:5660490 (PMID:29899041)
Ensembl GO_Central RGD
PMID:29899041
GO_REF:0000033 GO_REF:0000107
NCBI chr 6:117,879,828...117,925,284
Ensembl chr 6:117,879,823...117,925,284
G
Cep290
centrosomal protein 290
located_in
ISO
(PMID:29899041)
RGD
PMID:29899041
NCBI chr 7:35,310,071...35,399,388
Ensembl chr 7:35,310,199...35,399,392
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