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ONTOLOGY REPORT - ANNOTATIONS


Term:Seh1-associated complex
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Accession:GO:0035859 term browser browse the term
Definition:A GTPase-activating protein (GAP) complex that regulates TORC1 signaling by interacting with the Rag GTPase. In S. cerevisiae the complex contains Seh1p, Sec13p, Npr2p, Npr3p, Iml1p, Mtc5p, Rtc1p, and Sea4p.
Comment:The Rag GTPase complex corresponds to Gtr1-Gtr2 GTPase complex ; GO:1990131.
Synonyms:exact_synonym: GATOR complex;   SEA complex



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GATOR1 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmt2 base methyltransferase of 25S rRNA 2 homolog colocalizes_with
part_of
ISO
IEA
(PMID:29123071)
GO_REF:0000107
RGD
Ensembl
PMID:29123071 GO_REF:0000107 NCBI chr 4:41,881,630...41,945,472
Ensembl chr 4:41,879,993...41,945,539
JBrowse link
G Depdc5 DEP domain containing 5, GATOR1 subcomplex subunit part_of
located_in
IBA
ISO
PMID:21873635
(PMID:25263562)
(PMID:23723238)
RGD PMID:23723238 PMID:25263562 PMID:21873635 RGD:13792537 NCBI chr14:77,732,297...77,862,924
Ensembl chr14:77,732,297...77,862,794
JBrowse link
G Nprl2 NPR2-like, GATOR1 complex subunit part_of
located_in
ISO
IBA
(PMID:23723238)
(PMID:25263562)
PMID:21873635
RGD PMID:23723238 PMID:25263562 PMID:21873635 RGD:13792537 NCBI chr 8:108,215,823...108,218,996
Ensembl chr 8:108,215,814...108,218,996
JBrowse link
G Nprl3 NPR3-like, GATOR1 complex subunit part_of
located_in
IBA
ISO
PMID:21873635
(PMID:25263562)
(PMID:23723238)
RGD PMID:23723238 PMID:25263562 PMID:21873635 RGD:13792537 NCBI chr10:15,355,361...15,395,812
Ensembl chr10:15,355,355...15,395,810
JBrowse link
G Rraga Ras-related GTP binding A colocalizes_with ISO
ISS
(PMID:25936802)
GO_REF:0000024
RGD
UniProt
PMID:25936802 GO_REF:0000024 NCBI chr 5:101,113,341...101,114,936
Ensembl chr 5:101,112,859...101,114,510
JBrowse link
G Szt2 SZT2 subunit of KICSTOR complex colocalizes_with
part_of
ISO
IEA
(PMID:28199306), (PMID:28199315)
GO_REF:0000107
RGD
Ensembl
PMID:28199306 PMID:28199315 GO_REF:0000107 NCBI chr 5:131,897,250...131,943,953
Ensembl chr 5:131,897,275...131,943,904
JBrowse link
GATOR2 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Castor1 cytosolic arginine sensor for mTORC1 subunit 1 colocalizes_with ISO
ISS
(PMID:26972053)
GO_REF:0000024
RGD
UniProt
PMID:26972053 GO_REF:0000024 NCBI chr14:79,086,136...79,090,549
Ensembl chr14:79,086,136...79,090,548
JBrowse link
G Castor2 cytosolic arginine sensor for mTORC1 subunit 2 colocalizes_with
part_of
ISO
IEA
(PMID:26972053)
GO_REF:0000107
RGD
Ensembl
PMID:26972053 GO_REF:0000107 NCBI chr12:22,577,504...22,620,182
Ensembl chr12:22,577,512...22,620,182
JBrowse link
G Mios meiosis regulator for oocyte development part_of ISO (PMID:23723238) RGD PMID:23723238 NCBI chr 4:36,263,419...36,289,546
Ensembl chr 4:36,263,968...36,289,544
JBrowse link
G Sec13 SEC13 homolog, nuclear pore and COPII coat complex component part_of ISO (PMID:23723238) RGD PMID:23723238 NCBI chr 4:146,877,739...146,891,130
Ensembl chr 4:146,875,524...146,891,173
JBrowse link
G Seh1l SEH1-like nucleoporin part_of ISO (PMID:23723238) RGD PMID:23723238
G Sesn1 sestrin 1 colocalizes_with
part_of
ISO
IEA
(PMID:25263562), (PMID:26449471)
GO_REF:0000107
RGD
Ensembl
PMID:25263562 PMID:26449471 GO_REF:0000107 NCBI chr20:45,294,876...45,387,698
Ensembl chr20:45,294,871...45,387,697
JBrowse link
G Sesn3 sestrin 3 colocalizes_with
part_of
ISO
IEA
(PMID:25263562), (PMID:26449471)
GO_REF:0000107
RGD
Ensembl
PMID:25263562 PMID:26449471 GO_REF:0000107 NCBI chr 8:11,133,822...11,189,436
Ensembl chr 8:11,133,678...11,185,842
JBrowse link
G Szt2 SZT2 subunit of KICSTOR complex colocalizes_with
part_of
ISO
IEA
(PMID:28199306), (PMID:28199315)
GO_REF:0000107
RGD
Ensembl
PMID:28199306 PMID:28199315 GO_REF:0000107 NCBI chr 5:131,897,250...131,943,953
Ensembl chr 5:131,897,275...131,943,904
JBrowse link
G Wdr24 WD repeat domain 24 part_of ISO (PMID:23723238) RGD PMID:23723238 NCBI chr10:14,844,089...14,848,871
Ensembl chr10:14,843,728...14,848,864
JBrowse link
G Wdr59 WD repeat domain 59 part_of ISO (PMID:23723238) RGD PMID:23723238 NCBI chr19:39,416,432...39,483,773
Ensembl chr19:39,416,429...39,483,698
JBrowse link

Term paths to the root
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Term Annotations click to browse term
  cellular_component 19969
    protein-containing complex 6165
      Seh1-associated complex 15
        GATOR1 complex 6
        GATOR2 complex 10
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