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ONTOLOGY REPORT - ANNOTATIONS


Term:platelet-derived growth factor receptor-beta signaling pathway
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Accession:GO:0035791 term browser browse the term
Definition:The series of molecular signals initiated by the binding of a ligand to a beta-type platelet-derived growth factor receptor (PDGFbeta) on the surface of a signal-receiving cell, and ending with the regulation of a downstream cellular process, e.g. transcription.
Synonyms:exact_synonym: PDGF receptor-beta signaling pathway;   PDGFR-beta signaling pathway;   betaPDGF receptor signaling pathway;   platelet-derived growth factor receptor-beta signalling pathway



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platelet-derived growth factor receptor-beta signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 c-abl oncogene 1, non-receptor tyrosine kinase involved_in IEA
ISO
Ensembl
GO_Central
GO_REF:0000107 GO_REF:0000119 NCBI chr 2:31,578,256...31,697,105
Ensembl chr 2:31,578,388...31,694,239
JBrowse link
G Alk anaplastic lymphoma kinase involved_in IEA GOC GO_REF:0000108 NCBI chr17:72,174,206...72,911,719
Ensembl chr17:72,175,967...72,911,622
JBrowse link
G Axl AXL receptor tyrosine kinase involved_in IEA GOC GO_REF:0000108 NCBI chr 7:25,455,925...25,488,502
Ensembl chr 7:25,456,698...25,488,130
JBrowse link
G Clasp2 CLIP associating protein 2 involved_in ISO GO_Central GO_REF:0000119 NCBI chr 9:113,567,776...113,748,765
Ensembl chr 9:113,570,541...113,748,750
JBrowse link
G Csf1r colony stimulating factor 1 receptor involved_in IEA GOC GO_REF:0000108 NCBI chr18:61,238,644...61,264,211
Ensembl chr18:61,233,670...61,265,221
JBrowse link
G Ddr1 discoidin domain receptor family, member 1 involved_in IEA GOC GO_REF:0000108 NCBI chr17:35,992,459...36,015,633
Ensembl chr17:35,992,459...36,015,513
JBrowse link
G Ddr2 discoidin domain receptor family, member 2 involved_in IEA GOC GO_REF:0000108 NCBI chr 1:169,799,874...169,938,525
Ensembl chr 1:169,799,876...169,938,331
JBrowse link
G Egfr epidermal growth factor receptor involved_in IEA GOC GO_REF:0000108 NCBI chr11:16,700,153...16,868,158
Ensembl chr11:16,702,203...16,868,158
JBrowse link
G Epha1 Eph receptor A1 involved_in IEA GOC GO_REF:0000108 NCBI chr 6:42,335,421...42,350,249
Ensembl chr 6:42,335,421...42,350,202
JBrowse link
G Epha10 Eph receptor A10 involved_in IEA GOC GO_REF:0000108 NCBI chr 4:124,775,408...124,811,594
Ensembl chr 4:124,774,692...124,811,593
JBrowse link
G Epha2 Eph receptor A2 involved_in IEA GOC GO_REF:0000108 NCBI chr 4:141,028,532...141,056,695
Ensembl chr 4:141,028,551...141,056,695
JBrowse link
G Epha3 Eph receptor A3 involved_in IEA GOC GO_REF:0000108 NCBI chr16:63,363,895...63,684,538
Ensembl chr16:63,363,897...63,684,538
JBrowse link
G Epha4 Eph receptor A4 involved_in IEA GOC GO_REF:0000108 NCBI chr 1:77,343,819...77,491,763
Ensembl chr 1:77,343,822...77,491,725
JBrowse link
G Epha5 Eph receptor A5 involved_in IEA GOC GO_REF:0000108 NCBI chr 5:84,199,024...84,565,677
Ensembl chr 5:84,202,620...84,565,241
JBrowse link
G Epha6 Eph receptor A6 involved_in IEA GOC GO_REF:0000108 NCBI chr16:59,473,424...60,431,196
Ensembl chr16:59,473,846...60,425,894
JBrowse link
G Epha7 Eph receptor A7 involved_in IEA GOC GO_REF:0000108 NCBI chr 4:28,811,840...28,969,391
Ensembl chr 4:28,813,131...28,967,499
JBrowse link
G Epha8 Eph receptor A8 involved_in IEA GOC GO_REF:0000108 NCBI chr 4:136,656,729...136,684,170
Ensembl chr 4:136,656,730...136,684,127
JBrowse link
G Ephb1 Eph receptor B1 involved_in IEA GOC GO_REF:0000108 NCBI chr 9:101,799,327...102,231,892
Ensembl chr 9:101,799,327...102,231,892
JBrowse link
G Ephb2 Eph receptor B2 involved_in IEA GOC GO_REF:0000108 NCBI chr 4:136,374,850...136,563,637
Ensembl chr 4:136,374,850...136,563,299
JBrowse link
G Ephb3 Eph receptor B3 involved_in IEA GOC GO_REF:0000108 NCBI chr16:21,023,530...21,042,054
Ensembl chr16:21,023,505...21,042,055
JBrowse link
G Ephb4 Eph receptor B4 involved_in IEA GOC GO_REF:0000108 NCBI chr 5:137,348,371...137,372,784
Ensembl chr 5:137,348,371...137,376,931
JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 involved_in IEA GOC GO_REF:0000108 NCBI chr11:98,303,310...98,328,542
Ensembl chr11:98,303,296...98,328,542
JBrowse link
G Erbb4 erb-b2 receptor tyrosine kinase 4 involved_in IEA GOC GO_REF:0000108 NCBI chr 1:68,071,063...69,147,756
Ensembl chr 1:68,071,345...69,147,218
JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 involved_in IEA GOC GO_REF:0000108 NCBI chr 8:26,008,808...26,067,819
Ensembl chr 8:26,003,670...26,065,734
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 involved_in IEA GOC GO_REF:0000108 NCBI chr 7:129,764,181...129,868,538
Ensembl chr 7:129,764,181...132,725,079
JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 involved_in IEA GOC GO_REF:0000108 NCBI chr 5:33,879,068...33,894,412
Ensembl chr 5:33,879,018...33,894,412
JBrowse link
G Fgfr4 fibroblast growth factor receptor 4 involved_in IEA GOC GO_REF:0000108 NCBI chr13:55,300,631...55,316,572
Ensembl chr13:55,300,453...55,316,572
JBrowse link
G Flt1 FMS-like tyrosine kinase 1 involved_in IEA GOC GO_REF:0000108 NCBI chr 5:147,498,414...147,663,419
Ensembl chr 5:147,498,414...147,662,821
JBrowse link
G Flt3 FMS-like tyrosine kinase 3 involved_in IEA GOC GO_REF:0000108 NCBI chr 5:147,267,551...147,337,299
Ensembl chr 5:147,267,551...147,337,299
JBrowse link
G Flt4 FMS-like tyrosine kinase 4 involved_in IEA GOC GO_REF:0000108 NCBI chr11:49,500,506...49,543,566
Ensembl chr11:49,500,090...49,543,566
JBrowse link
G Igf1r insulin-like growth factor I receptor involved_in IEA GOC GO_REF:0000108 NCBI chr 7:67,601,486...67,883,416
Ensembl chr 7:67,602,575...67,883,416
JBrowse link
G Insr insulin receptor involved_in IEA GOC GO_REF:0000108 NCBI chr 8:3,200,922...3,329,649
Ensembl chr 8:3,172,061...3,329,617
JBrowse link
G Insrr insulin receptor-related receptor involved_in IEA GOC GO_REF:0000108 NCBI chr 3:87,704,215...87,723,408
Ensembl chr 3:87,704,258...87,723,408
JBrowse link
G Kdr kinase insert domain protein receptor involved_in IEA GOC GO_REF:0000108 NCBI chr 5:76,093,487...76,139,880
Ensembl chr 5:76,093,487...76,139,118
JBrowse link
G Kit KIT proto-oncogene receptor tyrosine kinase involved_in IEA GOC GO_REF:0000108 NCBI chr 5:75,735,647...75,817,382
Ensembl chr 5:75,735,576...75,817,382
JBrowse link
G Lox lysyl oxidase acts_upstream_of_or_within
involved_in
ISO
IBA
IMP
(PMID:18586678) MGI
GO_Central
PMID:18586678 GO_REF:0000033 NCBI chr18:52,649,132...52,662,939
Ensembl chr18:52,649,139...52,662,939
JBrowse link
G Ltk leukocyte tyrosine kinase involved_in IEA GOC GO_REF:0000108 NCBI chr 2:119,581,807...119,590,912
Ensembl chr 2:119,581,801...119,590,912
JBrowse link
G Mertk MER proto-oncogene tyrosine kinase involved_in IEA GOC GO_REF:0000108 NCBI chr 2:128,540,836...128,645,082
Ensembl chr 2:128,540,876...128,644,814
JBrowse link
G Met met proto-oncogene involved_in IEA GOC GO_REF:0000108 NCBI chr 6:17,463,351...17,573,979
Ensembl chr 6:17,463,799...17,573,979
JBrowse link
G Mst1r macrophage stimulating 1 receptor (c-met-related tyrosine kinase) involved_in IEA GOC GO_REF:0000108 NCBI chr 9:107,784,057...107,797,582
Ensembl chr 9:107,784,072...107,797,582
JBrowse link
G Musk muscle, skeletal, receptor tyrosine kinase involved_in IEA GOC GO_REF:0000108 NCBI chr 4:58,285,742...58,377,848
Ensembl chr 4:58,285,962...58,374,303
JBrowse link
G Ntrk1 neurotrophic tyrosine kinase, receptor, type 1 involved_in IEA GOC GO_REF:0000108 NCBI chr 3:87,685,551...87,702,549
Ensembl chr 3:87,685,551...87,702,469
JBrowse link
G Ntrk2 neurotrophic tyrosine kinase, receptor, type 2 involved_in IEA GOC GO_REF:0000108 NCBI chr13:58,954,363...59,281,782
Ensembl chr13:58,954,383...59,281,784
JBrowse link
G Ntrk3 neurotrophic tyrosine kinase, receptor, type 3 involved_in IEA GOC GO_REF:0000108 NCBI chr 7:77,825,711...78,228,865
Ensembl chr 7:77,825,707...78,387,760
JBrowse link
G Pdgfra platelet derived growth factor receptor, alpha polypeptide involved_in IEA GOC GO_REF:0000108 NCBI chr 5:75,311,988...75,358,867
Ensembl chr 5:75,312,953...75,358,876
JBrowse link
G Pdgfrb platelet derived growth factor receptor, beta polypeptide involved_in ISO GO_Central GO_REF:0000119 NCBI chr18:61,178,194...61,218,139
Ensembl chr18:61,178,222...61,218,133
JBrowse link
G Ptpn1 protein tyrosine phosphatase, non-receptor type 1 involved_in IMP
ISO
(PMID:14966296) UniProt
GO_Central
PMID:14966296 GO_REF:0000119 NCBI chr 2:167,772,670...167,821,305
Ensembl chr 2:167,773,977...167,821,305
JBrowse link
G Ret ret proto-oncogene involved_in IEA GOC GO_REF:0000108 NCBI chr 6:118,128,709...118,174,705
Ensembl chr 6:118,128,706...118,174,679
JBrowse link
G Ror2 receptor tyrosine kinase-like orphan receptor 2 involved_in IEA GOC GO_REF:0000108 NCBI chr13:53,263,353...53,440,160
Ensembl chr13:53,263,348...53,440,160
JBrowse link
G Ros1 Ros1 proto-oncogene involved_in IEA GOC GO_REF:0000108 NCBI chr10:51,920,959...52,071,494
Ensembl chr10:51,921,817...52,071,340
JBrowse link
G Tek TEK receptor tyrosine kinase involved_in IEA GOC GO_REF:0000108 NCBI chr 4:94,627,322...94,763,213
Ensembl chr 4:94,627,526...94,763,213
JBrowse link
G Tie1 tyrosine kinase with immunoglobulin-like and EGF-like domains 1 involved_in IEA GOC GO_REF:0000108 NCBI chr 4:118,328,388...118,347,046
Ensembl chr 4:118,328,388...118,347,258
JBrowse link
G Tyro3 TYRO3 protein tyrosine kinase 3 involved_in IEA GOC GO_REF:0000108 NCBI chr 2:119,628,123...119,648,585
Ensembl chr 2:119,628,214...119,648,585
JBrowse link
negative regulation of platelet-derived growth factor receptor-beta signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Glrx glutaredoxin ISO RGD PMID:16893901 RGD:9686048 NCBI chr13:75,988,004...75,998,270
Ensembl chr13:75,987,987...75,998,273
JBrowse link
G Lrp1 low density lipoprotein receptor-related protein 1 involved_in IMP (PMID:19742316) BHF-UCL PMID:19742316 NCBI chr10:127,374,026...127,457,158
Ensembl chr10:127,374,030...127,457,017
JBrowse link
G Myocd myocardin involved_in IDA (PMID:23825366) BHF-UCL PMID:23825366 NCBI chr11:65,064,434...65,160,821
Ensembl chr11:65,067,387...65,160,815
JBrowse link
G Ptpn2 protein tyrosine phosphatase, non-receptor type 2 involved_in IMP (PMID:14966296) UniProt PMID:14966296 NCBI chr18:67,798,571...67,857,697
Ensembl chr18:67,798,581...67,857,665
JBrowse link
positive regulation of metanephric mesenchymal cell migration by platelet-derived growth factor receptor-beta signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdgfa platelet derived growth factor, alpha involved_in ISO
ISS
GO_Central
UniProt
GO_REF:0000024 GO_REF:0000119 NCBI chr 5:138,961,761...138,986,336
Ensembl chr 5:138,961,769...138,983,125
JBrowse link
G Pdgfb platelet derived growth factor, B polypeptide involved_in ISO
ISS
GO_Central
UniProt
GO_REF:0000024 GO_REF:0000119 NCBI chr15:79,880,066...79,899,178
Ensembl chr15:79,880,075...79,899,178
JBrowse link
G Pdgfrb platelet derived growth factor receptor, beta polypeptide involved_in IMP (PMID:19019919) UniProt PMID:19019919 NCBI chr18:61,178,194...61,218,139
Ensembl chr18:61,178,222...61,218,133
JBrowse link
positive regulation of platelet-derived growth factor receptor-beta signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hip1 huntingtin interacting protein 1 involved_in ISO
IEA
IBA
GO_Central
Ensembl
GO_REF:0000033 GO_REF:0000107 GO_REF:0000119 NCBI chr 5:135,435,350...135,574,167
Ensembl chr 5:135,435,385...135,573,974
JBrowse link
G Hip1r huntingtin interacting protein 1 related involved_in IEA
ISO
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 GO_REF:0000119 NCBI chr 5:124,111,665...124,141,263
Ensembl chr 5:124,111,691...124,143,621
JBrowse link
G Src Rous sarcoma oncogene acts_upstream_of_or_within IMP (PMID:23651497) MGI PMID:23651497 NCBI chr 2:157,265,828...157,313,758
Ensembl chr 2:157,260,364...157,313,782
JBrowse link
regulation of platelet-derived growth factor receptor-beta signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lox lysyl oxidase acts_upstream_of_or_within IMP (PMID:21665949) MGI PMID:21665949 NCBI chr18:52,649,132...52,662,939
Ensembl chr18:52,649,139...52,662,939
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28632
    cellular process 18390
      signal transduction 6924
        cell surface receptor signaling pathway 3019
          enzyme-linked receptor protein signaling pathway 1118
            cell surface receptor protein tyrosine kinase signaling pathway 692
              platelet-derived growth factor receptor signaling pathway 120
                platelet-derived growth factor receptor-beta signaling pathway 62
                  VEGF-activated platelet-derived growth factor receptor-beta signaling pathway 0
                  negative regulation of platelet-derived growth factor receptor-beta signaling pathway 4
                  positive regulation of platelet-derived growth factor receptor-beta signaling pathway 3
                  regulation of metanephric mesenchymal cell migration by platelet-derived growth factor receptor-beta signaling pathway + 3
                  regulation of platelet-derived growth factor receptor-beta signaling pathway + 8
Path 2
Term Annotations click to browse term
  biological_process 28632
    biological regulation 13453
      regulation of biological process 13011
        signaling 7507
          signal transduction 6924
            cell surface receptor signaling pathway 3019
              enzyme-linked receptor protein signaling pathway 1118
                cell surface receptor protein tyrosine kinase signaling pathway 692
                  platelet-derived growth factor receptor signaling pathway 120
                    platelet-derived growth factor receptor-beta signaling pathway 62
                      VEGF-activated platelet-derived growth factor receptor-beta signaling pathway 0
                      negative regulation of platelet-derived growth factor receptor-beta signaling pathway 4
                      positive regulation of platelet-derived growth factor receptor-beta signaling pathway 3
                      regulation of metanephric mesenchymal cell migration by platelet-derived growth factor receptor-beta signaling pathway + 3
                      regulation of platelet-derived growth factor receptor-beta signaling pathway + 8
paths to the root