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ONTOLOGY REPORT - ANNOTATIONS


Term:platelet-derived growth factor receptor-beta signaling pathway
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Accession:GO:0035791 term browser browse the term
Definition:The series of molecular signals initiated by the binding of a ligand to a beta-type platelet-derived growth factor receptor (PDGFbeta) on the surface of a signal-receiving cell, and ending with the regulation of a downstream cellular process, e.g. transcription.
Synonyms:exact_synonym: PDGF receptor-beta signaling pathway;   PDGFR-beta signaling pathway;   betaPDGF receptor signaling pathway;   platelet-derived growth factor receptor-beta signalling pathway



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platelet-derived growth factor receptor-beta signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in IMP (PMID:24520051) UniProt PMID:24520051 NCBI chr 9:130,713,043...130,887,675
Ensembl chr 9:130,713,043...130,887,675
JBrowse link
G ALK ALK receptor tyrosine kinase involved_in IEA GOC GO_REF:0000108 NCBI chr 2:29,192,774...29,921,586
Ensembl chr 2:29,192,774...29,921,586
JBrowse link
G AXL AXL receptor tyrosine kinase involved_in IEA GOC GO_REF:0000108 NCBI chr19:41,219,223...41,261,766
Ensembl chr19:41,219,223...41,261,766
JBrowse link
G CLASP2 cytoplasmic linker associated protein 2 involved_in IDA (PMID:24520051) UniProt PMID:24520051 NCBI chr 3:33,496,245...33,718,254
Ensembl chr 3:33,496,245...33,718,356
JBrowse link
G CSF1R colony stimulating factor 1 receptor involved_in IEA GOC GO_REF:0000108 NCBI chr 5:150,053,295...150,113,365
Ensembl chr 5:150,053,291...150,113,372
JBrowse link
G DDR1 discoidin domain receptor tyrosine kinase 1 involved_in IEA GOC GO_REF:0000108 NCBI chr 6:30,880,970...30,900,156
Ensembl chr 6:30,876,421...30,900,156
JBrowse link
G DDR2 discoidin domain receptor tyrosine kinase 2 involved_in IEA GOC GO_REF:0000108 NCBI chr 1:162,630,863...162,787,405
Ensembl chr 1:162,631,373...162,787,405
JBrowse link
G EGFR epidermal growth factor receptor involved_in IEA GOC GO_REF:0000108 NCBI chr 7:55,019,017...55,211,628
Ensembl chr 7:55,019,017...55,211,628
JBrowse link
G EPHA1 EPH receptor A1 involved_in IEA GOC GO_REF:0000108 NCBI chr 7:143,391,129...143,408,856
Ensembl chr 7:143,390,289...143,408,856
JBrowse link
G EPHA10 EPH receptor A10 involved_in IEA GOC GO_REF:0000108 NCBI chr 1:37,713,880...37,765,120
Ensembl chr 1:37,713,880...37,765,133
JBrowse link
G EPHA2 EPH receptor A2 involved_in IEA GOC GO_REF:0000108 NCBI chr 1:16,124,337...16,156,069
Ensembl chr 1:16,124,337...16,156,069
JBrowse link
G EPHA3 EPH receptor A3 involved_in IEA GOC GO_REF:0000108 NCBI chr 3:89,107,621...89,482,134
Ensembl chr 3:89,107,621...89,482,134
JBrowse link
G EPHA4 EPH receptor A4 involved_in IEA GOC GO_REF:0000108 NCBI chr 2:221,418,027...221,574,202
Ensembl chr 2:221,418,027...221,574,202
JBrowse link
G EPHA5 EPH receptor A5 involved_in IEA GOC GO_REF:0000108 NCBI chr 4:65,319,567...65,670,489
Ensembl chr 4:65,319,563...65,670,495
JBrowse link
G EPHA6 EPH receptor A6 involved_in IEA GOC GO_REF:0000108 NCBI chr 3:96,814,594...97,761,532
Ensembl chr 3:96,814,581...97,761,532
JBrowse link
G EPHA7 EPH receptor A7 involved_in IEA GOC GO_REF:0000108 NCBI chr 6:93,240,020...93,419,559
Ensembl chr 6:93,240,020...93,419,687
JBrowse link
G EPHA8 EPH receptor A8 involved_in IEA GOC GO_REF:0000108 NCBI chr 1:22,563,489...22,603,595
Ensembl chr 1:22,563,489...22,603,595
JBrowse link
G EPHB1 EPH receptor B1 involved_in IEA GOC GO_REF:0000108 NCBI chr 3:134,795,260...135,260,467
Ensembl chr 3:134,795,260...135,260,467
JBrowse link
G EPHB2 EPH receptor B2 involved_in IEA GOC GO_REF:0000108 NCBI chr 1:22,710,838...22,921,500
Ensembl chr 1:22,710,839...22,921,500
JBrowse link
G EPHB3 EPH receptor B3 involved_in IEA GOC GO_REF:0000108 NCBI chr 3:184,561,785...184,582,408
Ensembl chr 3:184,561,785...184,582,408
JBrowse link
G EPHB4 EPH receptor B4 involved_in IEA GOC GO_REF:0000108 NCBI chr 7:100,802,565...100,827,523
Ensembl chr 7:100,802,565...100,827,523
JBrowse link
G ERBB2 erb-b2 receptor tyrosine kinase 2 involved_in IEA GOC GO_REF:0000108 NCBI chr17:39,688,094...39,728,658
Ensembl chr17:39,687,914...39,730,426
JBrowse link
G ERBB3 erb-b2 receptor tyrosine kinase 3 involved_in IEA GOC GO_REF:0000108 NCBI chr12:56,080,108...56,103,505
Ensembl chr12:56,076,799...56,103,505
JBrowse link
G ERBB4 erb-b2 receptor tyrosine kinase 4 involved_in IEA GOC GO_REF:0000108 NCBI chr 2:211,375,717...212,538,802
Ensembl chr 2:211,375,717...212,538,841
JBrowse link
G FGFR1 fibroblast growth factor receptor 1 involved_in IEA GOC GO_REF:0000108 NCBI chr 8:38,411,143...38,468,635
Ensembl chr 8:38,400,215...38,468,834
JBrowse link
G FGFR2 fibroblast growth factor receptor 2 involved_in IEA GOC GO_REF:0000108 NCBI chr10:121,478,330...121,598,458
Ensembl chr10:121,478,332...121,598,458
JBrowse link
G FGFR3 fibroblast growth factor receptor 3 involved_in IEA GOC GO_REF:0000108 NCBI chr 4:1,793,293...1,808,867
Ensembl chr 4:1,793,293...1,808,872
JBrowse link
G FGFR4 fibroblast growth factor receptor 4 involved_in IEA GOC GO_REF:0000108 NCBI chr 5:177,086,915...177,098,144
Ensembl chr 5:177,086,905...177,098,144
JBrowse link
G FLT1 fms related receptor tyrosine kinase 1 involved_in IEA GOC GO_REF:0000108 NCBI chr13:28,300,346...28,495,128
Ensembl chr13:28,300,346...28,495,145
JBrowse link
G FLT3 fms related receptor tyrosine kinase 3 involved_in IEA GOC GO_REF:0000108 NCBI chr13:28,003,274...28,100,576
Ensembl chr13:28,003,274...28,100,592
JBrowse link
G FLT4 fms related receptor tyrosine kinase 4 involved_in IEA GOC GO_REF:0000108 NCBI chr 5:180,601,506...180,650,298
Ensembl chr 5:180,601,506...180,649,624
JBrowse link
G IGF1R insulin like growth factor 1 receptor involved_in IEA GOC GO_REF:0000108 NCBI chr15:98,648,539...98,964,530
Ensembl chr15:98,648,539...98,964,530
JBrowse link
G INSR insulin receptor involved_in IEA GOC GO_REF:0000108 NCBI chr19:7,112,265...7,294,414
Ensembl chr19:7,112,255...7,294,414
JBrowse link
G INSRR insulin receptor related receptor involved_in IEA GOC GO_REF:0000108 NCBI chr 1:156,840,063...156,859,117
Ensembl chr 1:156,840,063...156,859,117
JBrowse link
G KDR kinase insert domain receptor involved_in IEA GOC GO_REF:0000108 NCBI chr 4:55,078,481...55,125,595
Ensembl chr 4:55,078,481...55,125,595
JBrowse link
G KIT KIT proto-oncogene, receptor tyrosine kinase involved_in IEA GOC GO_REF:0000108 NCBI chr 4:54,657,957...54,740,715
Ensembl chr 4:54,657,267...54,740,783
JBrowse link
G LOX lysyl oxidase acts_upstream_of_or_within
involved_in
ISO
IBA
IEA
PMID:18586678
(PMID:18586678)
MGI
GO_Central
Ensembl
PMID:18586678 GO_REF:0000033 GO_REF:0000107 RGD:14390060 NCBI chr 5:122,063,195...122,078,259
Ensembl chr 5:122,063,195...122,078,413
JBrowse link
G LTK leukocyte receptor tyrosine kinase involved_in IEA GOC GO_REF:0000108 NCBI chr15:41,503,637...41,513,827
Ensembl chr15:41,503,637...41,513,887
JBrowse link
G MERTK MER proto-oncogene, tyrosine kinase involved_in IEA GOC GO_REF:0000108 NCBI chr 2:111,898,607...112,029,561
Ensembl chr 2:111,898,607...112,029,561
JBrowse link
G MET MET proto-oncogene, receptor tyrosine kinase involved_in IEA GOC GO_REF:0000108 NCBI chr 7:116,672,196...116,798,377
Ensembl chr 7:116,672,196...116,798,377
JBrowse link
G MST1R macrophage stimulating 1 receptor involved_in IEA GOC GO_REF:0000108 NCBI chr 3:49,887,002...49,903,873
Ensembl chr 3:49,886,902...49,903,873
JBrowse link
G MUSK muscle associated receptor tyrosine kinase involved_in IEA GOC GO_REF:0000108 NCBI chr 9:110,668,791...110,806,558
Ensembl chr 9:110,668,779...110,806,558
JBrowse link
G NTRK1 neurotrophic receptor tyrosine kinase 1 involved_in IEA GOC GO_REF:0000108 NCBI chr 1:156,815,750...156,881,850
Ensembl chr 1:156,815,636...156,881,850
JBrowse link
G NTRK2 neurotrophic receptor tyrosine kinase 2 involved_in IEA GOC GO_REF:0000108 NCBI chr 9:84,668,522...85,027,054
Ensembl chr 9:84,668,375...85,095,751
JBrowse link
G NTRK3 neurotrophic receptor tyrosine kinase 3 involved_in IEA GOC GO_REF:0000108 NCBI chr15:87,859,751...88,256,739
Ensembl chr15:87,859,751...88,256,791
JBrowse link
G PDGFRA platelet derived growth factor receptor alpha involved_in IEA GOC GO_REF:0000108 NCBI chr 4:54,229,293...54,298,245
Ensembl chr 4:54,229,280...54,298,245
JBrowse link
G PDGFRB platelet derived growth factor receptor beta involved_in IMP
IEA
(PMID:2554309), (PMID:26599395) UniProt
GOC
PMID:2554309 PMID:26599395 GO_REF:0000108 NCBI chr 5:150,113,839...150,155,845
Ensembl chr 5:150,113,839...150,155,872
JBrowse link
G PDGFRL platelet derived growth factor receptor like involved_in IEA GOC GO_REF:0000108 NCBI chr 8:17,576,433...17,643,144
Ensembl chr 8:17,576,433...17,644,071
JBrowse link
G PTPN1 protein tyrosine phosphatase non-receptor type 1 involved_in IMP
IEA
(PMID:14966296) UniProt
Ensembl
PMID:14966296 GO_REF:0000107 NCBI chr20:50,510,383...50,585,241
Ensembl chr20:50,510,321...50,585,241
JBrowse link
G RET ret proto-oncogene involved_in IEA GOC GO_REF:0000108 NCBI chr10:43,077,069...43,130,351
Ensembl chr10:43,077,064...43,130,351
JBrowse link
G ROR2 receptor tyrosine kinase like orphan receptor 2 involved_in IEA GOC GO_REF:0000108 NCBI chr 9:91,722,601...91,950,228
Ensembl chr 9:91,563,091...91,950,228
JBrowse link
G ROS1 ROS proto-oncogene 1, receptor tyrosine kinase involved_in IEA GOC GO_REF:0000108 NCBI chr 6:117,287,353...117,425,942
Ensembl chr 6:117,287,353...117,425,942
JBrowse link
G TEK TEK receptor tyrosine kinase involved_in IEA GOC GO_REF:0000108 NCBI chr 9:27,109,225...27,230,174
Ensembl chr 9:27,109,141...27,230,174
JBrowse link
G TIE1 tyrosine kinase with immunoglobulin like and EGF like domains 1 involved_in IEA GOC GO_REF:0000108 NCBI chr 1:43,300,982...43,323,108
Ensembl chr 1:43,300,982...43,323,108
JBrowse link
G TYRO3 TYRO3 protein tyrosine kinase involved_in IEA GOC GO_REF:0000108 NCBI chr15:41,559,212...41,583,589
Ensembl chr15:41,557,675...41,583,589
JBrowse link
negative regulation of platelet-derived growth factor receptor-beta signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLRX glutaredoxin ISO RGD PMID:16893901 RGD:9686048 NCBI chr 5:95,813,849...95,822,726
Ensembl chr 5:95,751,319...95,822,726
JBrowse link
G LRP1 LDL receptor related protein 1 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr12:57,128,483...57,213,361
Ensembl chr12:57,128,483...57,213,361
JBrowse link
G MYOCD myocardin involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:12,665,890...12,768,949
Ensembl chr17:12,665,890...12,768,949
JBrowse link
G PTPN12 protein tyrosine phosphatase non-receptor type 12 involved_in TAS Reactome Reactome:R-HSA-8864036 NCBI chr 7:77,537,295...77,640,069
Ensembl chr 7:77,537,295...77,640,069
JBrowse link
G PTPN2 protein tyrosine phosphatase non-receptor type 2 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr18:12,785,478...12,884,237
Ensembl chr18:12,785,478...12,929,643
JBrowse link
positive regulation of metanephric mesenchymal cell migration by platelet-derived growth factor receptor-beta signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDGFA platelet derived growth factor subunit A involved_in IDA (PMID:19019919) UniProt PMID:19019919 NCBI chr 7:497,258...520,700
Ensembl chr 7:497,258...520,296
JBrowse link
G PDGFB platelet derived growth factor subunit B involved_in IDA (PMID:19019919) UniProt PMID:19019919 NCBI chr22:39,223,359...39,244,982
Ensembl chr22:39,223,359...39,244,982
JBrowse link
G PDGFRB platelet derived growth factor receptor beta involved_in ISS UniProt GO_REF:0000024 NCBI chr 5:150,113,839...150,155,845
Ensembl chr 5:150,113,839...150,155,872
JBrowse link
positive regulation of platelet-derived growth factor receptor-beta signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HIP1 huntingtin interacting protein 1 involved_in IMP
IBA
(PMID:14732715) ParkinsonsUK-UCL
GO_Central
PMID:14732715 GO_REF:0000033 NCBI chr 7:75,533,298...75,738,941
Ensembl chr 7:75,533,298...75,738,962
JBrowse link
G HIP1R huntingtin interacting protein 1 related involved_in IMP
IBA
(PMID:14732715) ParkinsonsUK-UCL
GO_Central
PMID:14732715 GO_REF:0000033 NCBI chr12:122,834,748...122,862,961
Ensembl chr12:122,834,453...122,862,961
JBrowse link
G SRC SRC proto-oncogene, non-receptor tyrosine kinase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23651497) Ensembl
MGI
PMID:23651497 GO_REF:0000107 NCBI chr20:37,344,699...37,406,050
Ensembl chr20:37,344,685...37,406,050
JBrowse link
regulation of platelet-derived growth factor receptor-beta signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOX lysyl oxidase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21665949) Ensembl
MGI
PMID:21665949 GO_REF:0000107 NCBI chr 5:122,063,195...122,078,259
Ensembl chr 5:122,063,195...122,078,413
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20484
    cellular process 19726
      signal transduction 6631
        cell surface receptor signaling pathway 3201
          enzyme-linked receptor protein signaling pathway 1179
            cell surface receptor protein tyrosine kinase signaling pathway 734
              platelet-derived growth factor receptor signaling pathway 122
                platelet-derived growth factor receptor-beta signaling pathway 65
                  VEGF-activated platelet-derived growth factor receptor-beta signaling pathway 0
                  negative regulation of platelet-derived growth factor receptor-beta signaling pathway 5
                  positive regulation of platelet-derived growth factor receptor-beta signaling pathway 3
                  regulation of metanephric mesenchymal cell migration by platelet-derived growth factor receptor-beta signaling pathway + 3
                  regulation of platelet-derived growth factor receptor-beta signaling pathway + 9
Path 2
Term Annotations click to browse term
  biological_process 20484
    biological regulation 13635
      regulation of biological process 13232
        signaling 7230
          signal transduction 6631
            cell surface receptor signaling pathway 3201
              enzyme-linked receptor protein signaling pathway 1179
                cell surface receptor protein tyrosine kinase signaling pathway 734
                  platelet-derived growth factor receptor signaling pathway 122
                    platelet-derived growth factor receptor-beta signaling pathway 65
                      VEGF-activated platelet-derived growth factor receptor-beta signaling pathway 0
                      negative regulation of platelet-derived growth factor receptor-beta signaling pathway 5
                      positive regulation of platelet-derived growth factor receptor-beta signaling pathway 3
                      regulation of metanephric mesenchymal cell migration by platelet-derived growth factor receptor-beta signaling pathway + 3
                      regulation of platelet-derived growth factor receptor-beta signaling pathway + 9
paths to the root