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ONTOLOGY REPORT - ANNOTATIONS


Term:platelet-derived growth factor receptor-beta signaling pathway
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Accession:GO:0035791 term browser browse the term
Definition:The series of molecular signals initiated by the binding of a ligand to a beta-type platelet-derived growth factor receptor (PDGFbeta) on the surface of a signal-receiving cell, and ending with the regulation of a downstream cellular process, e.g. transcription.
Synonyms:exact_synonym: PDGF receptor-beta signaling pathway;   PDGFR-beta signaling pathway;   betaPDGF receptor signaling pathway;   platelet-derived growth factor receptor-beta signalling pathway



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platelet-derived growth factor receptor-beta signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:53,118,462...53,262,092
Ensembl chr 9:53,119,641...53,261,307
JBrowse link
G ALK ALK receptor tyrosine kinase involved_in IEA GOC GO_REF:0000108 NCBI chr17:23,010,308...23,688,841
Ensembl chr17:23,010,308...23,688,841
JBrowse link
G CLASP2 cytoplasmic linker associated protein 2 involved_in ISO (PMID:24520051) UniProt PMID:24520051 NCBI chr23:3,261,778...3,423,698
Ensembl chr23:3,246,522...3,421,716
JBrowse link
G EPHA2 EPH receptor A2 involved_in IEA GOC GO_REF:0000108 NCBI chr 2:81,534,130...81,561,722
Ensembl chr 2:81,534,125...81,561,725
JBrowse link
G ERBB2 erb-b2 receptor tyrosine kinase 2 involved_in IEA GOC GO_REF:0000108 NCBI chr 9:22,760,373...22,785,367
Ensembl chr 9:22,759,256...22,785,294
JBrowse link
G FGFR2 fibroblast growth factor receptor 2 involved_in IEA GOC GO_REF:0000108 NCBI chr28:31,303,882...31,411,015
Ensembl chr28:31,303,894...31,411,621
JBrowse link
G FLT3 fms related receptor tyrosine kinase 3 involved_in IEA GOC GO_REF:0000108 NCBI chr25:11,551,372...11,670,891
Ensembl chr25:11,581,206...11,692,284
JBrowse link
G KDR kinase insert domain receptor involved_in IEA GOC GO_REF:0000108 NCBI chr13:47,442,861...47,484,574
Ensembl chr13:47,442,764...47,485,042
JBrowse link
G KIT KIT proto-oncogene, receptor tyrosine kinase involved_in IEA GOC GO_REF:0000108 NCBI chr13:47,108,442...47,190,935
Ensembl chr13:47,108,504...47,190,029
JBrowse link
G LOX lysyl oxidase acts_upstream_of_or_within
involved_in
ISO
IBA
IEA
PMID:18586678
(PMID:18586678)
MGI
GO_Central
Ensembl
PMID:18586678 GO_REF:0000033 GO_REF:0000107 RGD:14390060 NCBI chr11:12,023,645...12,040,015
Ensembl chr11:12,027,250...12,039,819
JBrowse link
G MET MET proto-oncogene, receptor tyrosine kinase involved_in IEA GOC GO_REF:0000108 NCBI chr14:55,599,047...55,711,626
Ensembl chr14:55,598,337...55,724,027
JBrowse link
G PDGFRA platelet derived growth factor receptor alpha involved_in IEA GOC GO_REF:0000108 NCBI chr13:46,729,722...46,775,828
Ensembl chr13:46,730,703...46,773,278
JBrowse link
G PDGFRB platelet derived growth factor receptor beta involved_in IEA GOC
Ensembl
GO_REF:0000107 GO_REF:0000108 NCBI chr 4:58,925,922...58,963,639
Ensembl chr 4:58,926,351...58,962,283
JBrowse link
G PTPN1 protein tyrosine phosphatase non-receptor type 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:36,936,469...37,010,929
Ensembl chr24:36,936,298...37,003,720
JBrowse link
negative regulation of platelet-derived growth factor receptor-beta signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLRX glutaredoxin ISO RGD PMID:16893901 RGD:9686048 NCBI chr 3:13,795,609...13,804,732
Ensembl chr 3:13,795,817...13,803,895
JBrowse link
G LRP1 LDL receptor related protein 1 involved_in ISO (PMID:19742316) BHF-UCL PMID:19742316 NCBI chr10:1,260,256...1,341,705
Ensembl chr10:1,260,719...1,352,271
JBrowse link
G MYOCD myocardin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:36,674,476...36,774,435
Ensembl chr 5:36,674,300...36,769,327
JBrowse link
G PTPN2 protein tyrosine phosphatase non-receptor type 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:78,160,564...78,252,382
Ensembl chr 7:78,160,589...78,252,719
JBrowse link
positive regulation of metanephric mesenchymal cell migration by platelet-derived growth factor receptor-beta signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDGFA platelet derived growth factor subunit A involved_in ISO (PMID:19019919) UniProt PMID:19019919 NCBI chr 6:16,271,082...16,293,246
Ensembl chr 6:16,270,104...16,292,396
JBrowse link
G PDGFB platelet derived growth factor subunit B involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr10:25,798,877...25,819,422
Ensembl chr10:25,798,938...25,817,746
JBrowse link
G PDGFRB platelet derived growth factor receptor beta involved_in ISO (PMID:19019919) UniProt PMID:19019919 NCBI chr 4:58,925,922...58,963,639
Ensembl chr 4:58,926,351...58,962,283
JBrowse link
positive regulation of platelet-derived growth factor receptor-beta signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HIP1 huntingtin interacting protein 1 involved_in IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr 6:6,957,760...7,115,676
Ensembl chr 6:6,961,053...7,115,618
JBrowse link
G HIP1R huntingtin interacting protein 1 related involved_in IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr26:6,623,583...6,639,107
Ensembl chr26:6,624,791...6,637,659
JBrowse link
G SRC SRC proto-oncogene, non-receptor tyrosine kinase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23651497) Ensembl
MGI
PMID:23651497 GO_REF:0000107 NCBI chr24:25,982,499...26,019,748
Ensembl chr24:25,999,048...26,018,077
JBrowse link
regulation of platelet-derived growth factor receptor-beta signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOX lysyl oxidase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21665949) Ensembl
MGI
PMID:21665949 GO_REF:0000107 NCBI chr11:12,023,645...12,040,015
Ensembl chr11:12,027,250...12,039,819
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 22098
    cellular process 21628
      signal transduction 6370
        cell surface receptor signaling pathway 2800
          enzyme-linked receptor protein signaling pathway 1053
            cell surface receptor protein tyrosine kinase signaling pathway 666
              platelet-derived growth factor receptor signaling pathway 74
                platelet-derived growth factor receptor-beta signaling pathway 23
                  VEGF-activated platelet-derived growth factor receptor-beta signaling pathway 0
                  negative regulation of platelet-derived growth factor receptor-beta signaling pathway 4
                  positive regulation of platelet-derived growth factor receptor-beta signaling pathway 3
                  regulation of metanephric mesenchymal cell migration by platelet-derived growth factor receptor-beta signaling pathway + 3
                  regulation of platelet-derived growth factor receptor-beta signaling pathway + 8
Path 2
Term Annotations click to browse term
  biological_process 22098
    biological regulation 12540
      regulation of biological process 12154
        signaling 6918
          signal transduction 6370
            cell surface receptor signaling pathway 2800
              enzyme-linked receptor protein signaling pathway 1053
                cell surface receptor protein tyrosine kinase signaling pathway 666
                  platelet-derived growth factor receptor signaling pathway 74
                    platelet-derived growth factor receptor-beta signaling pathway 23
                      VEGF-activated platelet-derived growth factor receptor-beta signaling pathway 0
                      negative regulation of platelet-derived growth factor receptor-beta signaling pathway 4
                      positive regulation of platelet-derived growth factor receptor-beta signaling pathway 3
                      regulation of metanephric mesenchymal cell migration by platelet-derived growth factor receptor-beta signaling pathway + 3
                      regulation of platelet-derived growth factor receptor-beta signaling pathway + 8
paths to the root