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ONTOLOGY REPORT - ANNOTATIONS


Term:platelet-derived growth factor receptor-beta signaling pathway
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Accession:GO:0035791 term browser browse the term
Definition:The series of molecular signals initiated by the binding of a ligand to a beta-type platelet-derived growth factor receptor (PDGFbeta) on the surface of a signal-receiving cell, and ending with the regulation of a downstream cellular process, e.g. transcription.
Synonyms:exact_synonym: PDGF receptor-beta signaling pathway;   PDGFR-beta signaling pathway;   betaPDGF receptor signaling pathway;   platelet-derived growth factor receptor-beta signalling pathway



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platelet-derived growth factor receptor-beta signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:101,834,189...102,005,811
Ensembl chr 9:130,484,333...130,652,941
JBrowse link
G ALK ALK receptor tyrosine kinase involved_in IEA GOC GO_REF:0000108 NCBI chr2A:29,196,195...29,930,062
Ensembl chr2A:29,276,041...30,006,735
JBrowse link
G AXL AXL receptor tyrosine kinase involved_in IEA GOC GO_REF:0000108 NCBI chr19:38,211,555...38,254,464
Ensembl chr19:46,719,615...46,761,747
JBrowse link
G CLASP2 cytoplasmic linker associated protein 2 involved_in ISO (PMID:24520051) UniProt PMID:24520051 NCBI chr 3:33,418,300...33,640,185
Ensembl chr 3:33,721,153...33,938,560
JBrowse link
G CSF1R colony stimulating factor 1 receptor involved_in IEA GOC GO_REF:0000108 NCBI chr 5:145,478,725...145,537,858
Ensembl chr 5:151,483,572...151,517,415
JBrowse link
G DDR1 discoidin domain receptor tyrosine kinase 1 involved_in IEA GOC GO_REF:0000108 NCBI chr 6:30,625,871...30,645,066
Ensembl chr 6:31,496,047...31,513,455
JBrowse link
G DDR2 discoidin domain receptor tyrosine kinase 2 involved_in IEA GOC GO_REF:0000108 NCBI chr 1:138,048,730...138,200,426
Ensembl chr 1:141,932,158...141,990,766
JBrowse link
G EGFR epidermal growth factor receptor involved_in IEA GOC GO_REF:0000108 NCBI chr 7:55,614,042...55,807,285
Ensembl chr 7:56,046,296...56,111,615
JBrowse link
G EPHA1 EPH receptor A1 involved_in IEA GOC GO_REF:0000108 NCBI chr 7:135,385,894...135,403,632
Ensembl chr 7:147,875,363...147,892,745
JBrowse link
G EPHA2 EPH receptor A2 involved_in IEA GOC GO_REF:0000108 NCBI chr 1:15,259,915...15,292,983
Ensembl chr 1:16,253,513...16,284,787
JBrowse link
G EPHA3 EPH receptor A3 involved_in IEA GOC GO_REF:0000108 NCBI chr 3:89,261,166...89,629,010
Ensembl chr 3:91,369,239...91,739,056
JBrowse link
G EPHA4 EPH receptor A4 involved_in IEA GOC GO_REF:0000108 NCBI chr2B:108,664,475...108,818,802
Ensembl chr2B:227,248,958...227,402,790
JBrowse link
G EPHA6 EPH receptor A6 involved_in IEA GOC GO_REF:0000108 NCBI chr 3:93,881,686...94,819,563
Ensembl chr 3:100,734,791...101,503,805
JBrowse link
G EPHA7 EPH receptor A7 involved_in IEA GOC GO_REF:0000108 NCBI chr 6:91,143,240...91,322,040
Ensembl chr 6:94,392,353...94,566,716
JBrowse link
G EPHA8 EPH receptor A8 involved_in IEA GOC GO_REF:0000108 NCBI chr 1:21,746,846...21,792,635
Ensembl chr 1:22,700,512...22,735,944
JBrowse link
G EPHB1 EPH receptor B1 involved_in IEA GOC GO_REF:0000108 NCBI chr 3:131,841,459...132,309,082
Ensembl chr 3:139,313,387...139,776,802
JBrowse link
G EPHB2 EPH receptor B2 involved_in IEA GOC GO_REF:0000108 NCBI chr 1:21,895,961...22,107,649
Ensembl chr 1:22,912,570...23,047,118
JBrowse link
G EPHB3 EPH receptor B3 involved_in IEA GOC GO_REF:0000108 NCBI chr 3:181,604,188...181,624,744
Ensembl chr 3:190,089,522...190,104,905
JBrowse link
G EPHB4 EPH receptor B4 involved_in IEA GOC GO_REF:0000108 NCBI chr 7:92,827,550...92,852,462
Ensembl chr 7:106,223,427...106,248,022
JBrowse link
G ERBB2 erb-b2 receptor tyrosine kinase 2 involved_in IEA GOC GO_REF:0000108 NCBI chr17:17,560,337...17,600,808
Ensembl chr17:17,777,434...17,805,862
JBrowse link
G ERBB3 erb-b2 receptor tyrosine kinase 3 involved_in IEA GOC GO_REF:0000108 NCBI chr12:32,811,533...32,834,958
Ensembl chr12:33,063,434...33,084,994
JBrowse link
G ERBB4 erb-b2 receptor tyrosine kinase 4 involved_in IEA GOC GO_REF:0000108 NCBI chr2B:98,625,630...99,795,371
Ensembl chr2B:217,069,644...218,272,006
JBrowse link
G FGFR1 fibroblast growth factor receptor 1 involved_in IEA GOC GO_REF:0000108 NCBI chr 8:37,713,133...37,773,098
Ensembl chr 8:34,890,147...34,948,904
JBrowse link
G FGFR2 fibroblast growth factor receptor 2 involved_in IEA GOC GO_REF:0000108 NCBI chr10:118,055,854...118,175,440
Ensembl chr10:121,469,735...121,588,815
JBrowse link
G FGFR3 fibroblast growth factor receptor 3 involved_in IEA GOC GO_REF:0000108 NCBI chr 4:1,933,172...1,948,742
Ensembl chr 4:1,843,774...1,861,692
JBrowse link
G FGFR4 fibroblast growth factor receptor 4 involved_in IEA GOC GO_REF:0000108 NCBI chr 5:172,386,443...172,400,271
Ensembl chr 5:179,454,995...179,467,605
JBrowse link
G FLT3 fms related receptor tyrosine kinase 3 involved_in IEA GOC GO_REF:0000108 NCBI chr13:9,283,747...9,381,553
Ensembl chr13:27,627,178...27,723,940
JBrowse link
G FLT4 fms related receptor tyrosine kinase 4 involved_in IEA GOC GO_REF:0000108 NCBI chr 5:175,804,728...175,852,703
Ensembl chr 5:183,115,856...183,149,006
JBrowse link
G IGF1R insulin like growth factor 1 receptor involved_in IEA GOC GO_REF:0000108 NCBI chr15:77,332,926...77,648,474
Ensembl chr15:96,535,164...96,832,974
JBrowse link
G INSR insulin receptor involved_in IEA GOC GO_REF:0000108 NCBI chr19:6,393,407...6,578,234
Ensembl chr19:7,260,246...7,414,889
JBrowse link
G INSRR insulin receptor related receptor involved_in IEA GOC GO_REF:0000108 NCBI chr 1:132,183,963...132,195,267
Ensembl chr 1:136,005,458...136,024,374
JBrowse link
G KDR kinase insert domain receptor involved_in IEA GOC GO_REF:0000108 NCBI chr 4:68,813,894...68,861,018
Ensembl chr 4:75,377,375...75,427,109
JBrowse link
G KIT KIT proto-oncogene, receptor tyrosine kinase involved_in IEA GOC GO_REF:0000108 NCBI chr 4:69,199,543...69,282,323
Ensembl chr 4:75,761,946...75,844,473
JBrowse link
G LOX lysyl oxidase acts_upstream_of_or_within
involved_in
ISO
IEA
PMID:18586678
(PMID:18586678)
MGI
Ensembl
PMID:18586678 GO_REF:0000107 RGD:14390060 NCBI chr 5:117,450,833...117,464,957
Ensembl chr 5:123,234,662...123,248,717
JBrowse link
G LTK leukocyte receptor tyrosine kinase involved_in IEA GOC GO_REF:0000108 NCBI chr15:20,444,471...20,455,586
Ensembl chr15:38,685,255...38,695,381
JBrowse link
G MERTK MER proto-oncogene, tyrosine kinase involved_in IEA GOC GO_REF:0000108 NCBI chr2A:89,977,226...90,109,970
Ensembl chr2A:113,056,852...113,162,052
JBrowse link
G MET MET proto-oncogene, receptor tyrosine kinase involved_in IEA GOC GO_REF:0000108 NCBI chr 7:108,646,278...108,772,238
Ensembl chr 7:121,365,438...121,468,159
JBrowse link
G MST1R macrophage stimulating 1 receptor involved_in IEA GOC GO_REF:0000108 NCBI chr 3:49,818,538...49,835,713
Ensembl chr 3:51,054,795...51,072,401
JBrowse link
G MUSK muscle associated receptor tyrosine kinase involved_in IEA GOC GO_REF:0000108 NCBI chr 9:81,814,766...81,947,341
Ensembl chr 9:109,980,748...110,107,480
JBrowse link
G NTRK1 neurotrophic receptor tyrosine kinase 1 involved_in IEA GOC GO_REF:0000108 Ensembl chr 1:136,007,476...136,047,355 JBrowse link
G NTRK2 neurotrophic receptor tyrosine kinase 2 involved_in IEA GOC GO_REF:0000108 NCBI chr 9:39,663,986...40,208,770
Ensembl chr 9:84,021,837...84,372,678
JBrowse link
G NTRK3 neurotrophic receptor tyrosine kinase 3 involved_in IEA GOC GO_REF:0000108 NCBI chr15:66,566,219...66,953,279
Ensembl chr15:85,776,832...86,157,204
JBrowse link
G PDGFRA platelet derived growth factor receptor alpha involved_in IEA GOC GO_REF:0000108 NCBI chr 4:69,639,081...69,709,870
Ensembl chr 4:76,199,382...76,271,097
JBrowse link
G PDGFRB platelet derived growth factor receptor beta involved_in IEA GOC
Ensembl
GO_REF:0000107 GO_REF:0000108 NCBI chr 5:145,538,330...145,580,312
Ensembl chr 5:151,543,891...151,585,530
JBrowse link
G PTPN1 protein tyrosine phosphatase non-receptor type 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:46,854,918...46,929,509
Ensembl chr20:47,983,098...48,057,421
JBrowse link
G RET ret proto-oncogene involved_in IEA GOC GO_REF:0000108 NCBI chr10:40,050,396...40,103,629
Ensembl chr10:43,249,468...43,284,331
JBrowse link
G ROS1 ROS proto-oncogene 1, receptor tyrosine kinase involved_in IEA GOC GO_REF:0000108 NCBI chr 6:115,095,753...115,234,525
Ensembl chr 6:119,238,419...119,376,053
JBrowse link
G TEK TEK receptor tyrosine kinase involved_in IEA GOC GO_REF:0000108 NCBI chr 9:26,955,339...27,077,809
Ensembl chr 9:27,561,421...27,683,572
JBrowse link
G TIE1 tyrosine kinase with immunoglobulin like and EGF like domains 1 involved_in IEA GOC GO_REF:0000108 NCBI chr 1:42,602,333...42,624,471
Ensembl chr 1:43,979,838...44,002,167
JBrowse link
G TYRO3 TYRO3 protein tyrosine kinase involved_in IEA GOC GO_REF:0000108 NCBI chr15:20,499,789...20,520,152
Ensembl chr15:38,739,509...38,760,288
JBrowse link
negative regulation of platelet-derived growth factor receptor-beta signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLRX glutaredoxin ISO RGD PMID:16893901 RGD:9686048 NCBI chr 5:19,526,210...19,535,237
Ensembl chr 5:19,671,965...19,680,685
JBrowse link
G LRP1 LDL receptor related protein 1 involved_in ISO (PMID:19742316) BHF-UCL PMID:19742316 NCBI chr12:31,713,938...31,799,287
Ensembl chr12:31,966,149...32,051,979
JBrowse link
G MYOCD myocardin involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:38,880,120...38,983,246
Ensembl chr17:43,584,259...43,681,659
JBrowse link
G PTPN2 protein tyrosine phosphatase non-receptor type 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:1,440,837...1,538,501
Ensembl chr18:16,562,052...16,659,570
JBrowse link
positive regulation of metanephric mesenchymal cell migration by platelet-derived growth factor receptor-beta signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDGFA platelet derived growth factor subunit A involved_in ISO (PMID:19019919) UniProt PMID:19019919 NCBI chr 7:648,722...672,023 JBrowse link
G PDGFB platelet derived growth factor subunit B involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:20,127,223...20,148,407
Ensembl chr22:37,944,018...37,964,883
JBrowse link
G PDGFRB platelet derived growth factor receptor beta involved_in ISO (PMID:19019919) UniProt PMID:19019919 NCBI chr 5:145,538,330...145,580,312
Ensembl chr 5:151,543,891...151,585,530
JBrowse link
positive regulation of platelet-derived growth factor receptor-beta signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HIP1 huntingtin interacting protein 1 involved_in ISO (PMID:14732715) ParkinsonsUK-UCL PMID:14732715 NCBI chr 7:68,281,899...68,464,233 JBrowse link
G HIP1R huntingtin interacting protein 1 related involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:120,438,841...120,467,489
Ensembl chr12:124,685,091...124,700,726
JBrowse link
G SRC SRC proto-oncogene, non-receptor tyrosine kinase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23651497) Ensembl
MGI
PMID:23651497 GO_REF:0000107 NCBI chr20:33,667,614...33,727,126
Ensembl chr20:34,822,271...34,839,634
JBrowse link
regulation of platelet-derived growth factor receptor-beta signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOX lysyl oxidase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21665949) Ensembl
MGI
PMID:21665949 GO_REF:0000107 NCBI chr 5:117,450,833...117,464,957
Ensembl chr 5:123,234,662...123,248,717
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19444
    cellular process 18997
      signal transduction 5489
        cell surface receptor signaling pathway 2658
          enzyme-linked receptor protein signaling pathway 952
            cell surface receptor protein tyrosine kinase signaling pathway 621
              platelet-derived growth factor receptor signaling pathway 110
                platelet-derived growth factor receptor-beta signaling pathway 59
                  VEGF-activated platelet-derived growth factor receptor-beta signaling pathway 0
                  negative regulation of platelet-derived growth factor receptor-beta signaling pathway 4
                  positive regulation of platelet-derived growth factor receptor-beta signaling pathway 3
                  regulation of metanephric mesenchymal cell migration by platelet-derived growth factor receptor-beta signaling pathway + 3
                  regulation of platelet-derived growth factor receptor-beta signaling pathway + 8
Path 2
Term Annotations click to browse term
  biological_process 19444
    biological regulation 11901
      regulation of biological process 11518
        signaling 5999
          signal transduction 5489
            cell surface receptor signaling pathway 2658
              enzyme-linked receptor protein signaling pathway 952
                cell surface receptor protein tyrosine kinase signaling pathway 621
                  platelet-derived growth factor receptor signaling pathway 110
                    platelet-derived growth factor receptor-beta signaling pathway 59
                      VEGF-activated platelet-derived growth factor receptor-beta signaling pathway 0
                      negative regulation of platelet-derived growth factor receptor-beta signaling pathway 4
                      positive regulation of platelet-derived growth factor receptor-beta signaling pathway 3
                      regulation of metanephric mesenchymal cell migration by platelet-derived growth factor receptor-beta signaling pathway + 3
                      regulation of platelet-derived growth factor receptor-beta signaling pathway + 8
paths to the root