Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:ribonucleoprotein granule
go back to main search page
Accession:GO:0035770 term browser browse the term
Definition:A non-membranous macromolecular complex containing proteins and translationally silenced mRNAs. RNA granules contain proteins that control the localization, stability, and translation of their RNA cargo. Different types of RNA granules (RGs) exist, depending on the cell type and cellular conditions.
Synonyms:exact_synonym: RNP granule;   mRNP granule
 narrow_synonym: RNA granule



show annotations for term's descendants           Sort by:
ribonucleoprotein granule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddx28 DEAD-box helicase 28 located_in ISO (PMID:25683715) RGD PMID:25683715 NCBI chr19:33,909,799...33,911,729
Ensembl chr19:33,909,801...33,911,742
JBrowse link
G Dhx30 DExH-box helicase 30 located_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:25683715)
UniProt
Ensembl
RGD
PMID:25683715 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:110,064,751...110,096,954
Ensembl chr 8:110,064,752...110,097,381
JBrowse link
G Fastk Fas-activated serine/threonine kinase is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:10,732,273...10,736,332
Ensembl chr 4:10,732,256...10,737,430
JBrowse link
G Fastkd1 FAST kinase domains 1 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:54,449,710...54,475,624
Ensembl chr 3:54,449,711...54,475,540
JBrowse link
G Fastkd2 FAST kinase domains 2 located_in
is_active_in
ISS
IBA
IEA
ISO
GO_REF:0000024
GO_REF:0000033
GO_REF:0000107
(PMID:25683715)
UniProt
GO_Central
Ensembl
RGD
PMID:25683715 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:65,166,148...65,188,184
Ensembl chr 9:65,168,228...65,188,174
JBrowse link
G Fastkd3 FAST kinase domains 3 is_active_in
located_in
IBA
IEA
GO_REF:0000033
GO_REF:0000118
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr 1:34,858,342...34,866,988
Ensembl chr 1:34,858,219...34,866,973
JBrowse link
G Fastkd5 FAST kinase domains 5 located_in ISO (PMID:25683715) RGD PMID:25683715 NCBI chr 3:117,830,219...117,847,707
Ensembl chr 3:117,830,083...117,847,820
JBrowse link
G Fblim1 filamin binding LIM protein 1 located_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 5:153,883,945...153,915,524
Ensembl chr 5:153,883,960...153,913,757
JBrowse link
G Fxr1 FMR1 autosomal homolog 1 located_in ISO (MGI:5302731|PMID:22022532) RGD PMID:22022532 MGI:5302731 NCBI chr 2:116,884,167...116,937,590
Ensembl chr 2:116,884,248...116,937,590
JBrowse link
G Grsf1 G-rich RNA sequence binding factor 1 located_in ISO (PMID:25683715) RGD PMID:25683715 NCBI chr14:19,412,944...19,429,364
Ensembl chr14:19,412,156...19,429,362
JBrowse link
G Hnrnpa3 heterogeneous nuclear ribonucleoprotein A3 IDA RGD PMID:11886857 RGD:625404 NCBI chr 3:60,578,574...60,588,755
Ensembl chr 3:60,578,673...60,588,306
JBrowse link
G Hnrnpl heterogeneous nuclear ribonucleoprotein L located_in ISO
IEA
ISS
(PMID:17289661)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:17289661 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:84,098,558...84,111,568
Ensembl chr 1:84,100,879...84,111,553
JBrowse link
G Rpusd3 RNA pseudouridine synthase D3 located_in ISO (PMID:28082677) RGD PMID:28082677 NCBI chr 4:146,553,743...146,562,789
Ensembl chr 4:146,558,562...146,562,794
JBrowse link
G Rpusd4 RNA pseudouridine synthase D4 located_in ISO (PMID:28082677) RGD PMID:28082677 NCBI chr 8:33,617,384...33,626,873
Ensembl chr 8:33,617,379...33,626,873
JBrowse link
G Tbrg4 transforming growth factor beta regulator 4 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:81,481,977...81,490,781
Ensembl chr14:81,481,981...81,490,756
JBrowse link
G Tdrd7 tudor domain containing 7 located_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:21436445)
UniProt
Ensembl
RGD
PMID:21436445 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:60,238,742...60,312,548
Ensembl chr 5:60,238,678...60,312,544
JBrowse link
G Trub2 TruB pseudouridine synthase family member 2 located_in ISO (PMID:28082677) RGD PMID:28082677 NCBI chr 3:13,049,220...13,059,836
Ensembl chr 3:13,033,745...13,059,930
JBrowse link
G Ythdc2 YTH N6-methyladenosine RNA binding protein C2 located_in ISO (MGI:6109052|PMID:29087293) RGD PMID:29087293 MGI:6109052 NCBI chr18:37,266,559...37,331,681
Ensembl chr18:37,265,836...37,331,023
JBrowse link
chromatoid body term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ago2 argonaute RISC catalytic component 2 IDA MMO:0000663 RGD PMID:27029769 RGD:11529670 NCBI chr 7:105,018,202...105,105,118
Ensembl chr 7:105,029,120...105,104,974
JBrowse link
G Bmal1 basic helix-loop-helix ARNT like 1 located_in ISS
ISO
GO_REF:0000024
(MGI:5447260|PMID:22900038)
UniProt
RGD
PMID:22900038 GO_REF:0000024 MGI:5447260 NCBI chr 1:167,331,756...167,430,235
Ensembl chr 1:167,331,633...167,430,231
JBrowse link
G Clock clock circadian regulator located_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5447260|PMID:22900038)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:22900038 GO_REF:0000024 GO_REF:0000107 MGI:5447260 NCBI chr14:31,908,542...31,992,673
Ensembl chr14:31,908,566...31,990,400
JBrowse link
G Ddx25 DEAD-box helicase 25 located_in ISS
ISO
GO_REF:0000024
(MGI:3040720|PMID:15096601), (MGI:6453518|PMID:32665638)
UniProt
RGD
PMID:15096601 PMID:32665638 GO_REF:0000024 MGI:3040720 MGI:6453518 NCBI chr 8:33,894,224...33,910,377
Ensembl chr 8:33,894,232...33,921,764
JBrowse link
G Ddx4 DEAD-box helicase 4 located_in IDA
ISO
(PMID:10781947)
(MGI:1858321|PMID:10781947), (MGI:5446593|PMID:22792342)
RGD PMID:10781947 PMID:22792342 PMID:24141902 MGI:1858321 MGI:5446593, RGD:10755411 NCBI chr 2:44,227,946...44,282,867
Ensembl chr 2:44,227,946...44,282,723
JBrowse link
G Ddx6 DEAD-box helicase 6 IDA RGD PMID:24141902 RGD:10755411 NCBI chr 8:44,931,127...44,967,773
Ensembl chr 8:44,931,974...44,964,405
JBrowse link
G Eif4e eukaryotic translation initiation factor 4E located_in ISO (MGI:5446593|PMID:22792342) RGD PMID:22792342 MGI:5446593 NCBI chr 2:227,066,519...227,099,261
Ensembl chr 2:227,066,673...227,098,683
JBrowse link
G Mael maelstrom spermatogenic transposon silencer located_in ISO (MGI:3655410|PMID:16787967) RGD PMID:16787967 MGI:3655410 NCBI chr13:78,457,073...78,496,657
Ensembl chr13:78,457,073...78,496,657
JBrowse link
G Marcks myristoylated alanine rich protein kinase C substrate IDA RGD PMID:21764106 RGD:9685331 NCBI chr20:40,685,315...40,691,012
Ensembl chr20:40,685,315...40,691,012
JBrowse link
G Nsun2 NOP2/Sun RNA methyltransferase 2 part_of ISO (MGI:5525987|PMID:23401851) RGD PMID:23401851 MGI:5525987 NCBI chr 1:33,662,139...33,685,887
Ensembl chr 1:33,662,139...33,685,862
JBrowse link
G Piwil1 piwi-like RNA-mediated gene silencing 1 located_in ISO (MGI:3640041|PMID:16787948), (MGI:3663970|PMID:16938833), (MGI:5049827|PMID:21539824) RGD PMID:16787948 PMID:16938833 PMID:21539824 MGI:3640041 MGI:3663970 MGI:5049827 NCBI chr12:27,949,743...27,970,645
Ensembl chr12:27,949,744...27,970,580
JBrowse link
G Piwil2 piwi-like RNA-mediated gene silencing 2 located_in ISO (MGI:3842880|PMID:19114715), (MGI:5049827|PMID:21539824) RGD PMID:19114715 PMID:21539824 MGI:3842880 MGI:5049827 NCBI chr15:45,431,402...45,498,034
Ensembl chr15:45,431,703...45,497,702
JBrowse link
G Slc25a54 solute carrier family 25, member 54 located_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 2:196,711,573...196,758,196
Ensembl chr 2:196,711,637...196,756,827
JBrowse link
G Smg1 SMG1, nonsense mediated mRNA decay associated PI3K related kinase located_in ISO (MGI:6453518|PMID:32665638) RGD PMID:32665638 MGI:6453518 NCBI chr 1:172,441,892...172,543,667
Ensembl chr 1:172,444,936...172,543,698
JBrowse link
G Tdrd1 tudor domain containing 1 located_in ISO (MGI:3695528|PMID:17141210) RGD PMID:17141210 MGI:3695528 NCBI chr 1:255,871,939...255,919,222
Ensembl chr 1:255,875,887...255,915,871
JBrowse link
G Tdrd5 tudor domain containing 5 located_in IEA
ISO
ISS
GO_REF:0000107
(MGI:4946318|PMID:21383078)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:21383078 GO_REF:0000024 GO_REF:0000107 MGI:4946318 NCBI chr13:68,394,180...68,447,745
Ensembl chr13:68,394,061...68,441,319
JBrowse link
G Tdrd6 tudor domain containing 6 located_in ISO (MGI:3847167|PMID:19345099) RGD PMID:19345099 MGI:3847167 NCBI chr 9:17,344,033...17,359,348
Ensembl chr 9:17,344,026...17,359,344
JBrowse link
G Tdrd7 tudor domain containing 7 located_in ISO (MGI:3695528|PMID:17141210) RGD PMID:17141210 MGI:3695528 NCBI chr 5:60,238,742...60,312,548
Ensembl chr 5:60,238,678...60,312,544
JBrowse link
cytoplasmic ribonucleoprotein granule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actb actin, beta located_in ISO
IEA
(PMID:15121898)
GO_REF:0000107
RGD
Ensembl
PMID:15121898 GO_REF:0000107 NCBI chr12:11,663,112...11,666,697
Ensembl chr12:11,663,109...11,672,877
JBrowse link
G Ago1 argonaute RISC component 1 located_in
is_active_in
ISO
IBA
GO_REF:0000033 RGD
GO_Central
GO_REF:0000033 GO_REF:0000052 NCBI chr 5:138,722,111...138,757,118
Ensembl chr 5:138,722,111...138,773,546
JBrowse link
G Ago2 argonaute RISC catalytic component 2 located_in
is_active_in
ISO
IBA
GO_REF:0000033 RGD
GO_Central
GO_REF:0000033 GO_REF:0000052 NCBI chr 7:105,018,202...105,105,118
Ensembl chr 7:105,029,120...105,104,974
JBrowse link
G Ago3 argonaute RISC catalytic component 3 located_in
is_active_in
ISO
IBA
GO_REF:0000033 RGD
GO_Central
GO_REF:0000033 GO_REF:0000052 NCBI chr 5:138,632,367...138,714,230
Ensembl chr 5:138,639,569...138,714,230
JBrowse link
G Ago4 argonaute RISC component 4 located_in
is_active_in
ISO
IBA
GO_REF:0000033 RGD
GO_Central
GO_REF:0000033 GO_REF:0000052 NCBI chr 5:138,780,446...138,825,898
Ensembl chr 5:138,783,069...138,825,632
JBrowse link
G Bard1 BRCA1 associated RING domain 1 located_in IEA
ISO
GO_REF:0000107 Ensembl
RGD
GO_REF:0000052 GO_REF:0000107 NCBI chr 9:72,616,070...72,694,553
Ensembl chr 9:72,623,155...72,694,265
JBrowse link
G Btbd1 BTB domain containing 1 located_in ISO RGD GO_REF:0000052 NCBI chr 1:135,734,549...135,773,067
Ensembl chr 1:135,734,589...135,771,981
JBrowse link
G Cdc42 cell division cycle 42 located_in ISO (PMID:15121898) RGD PMID:15121898 NCBI chr 5:149,555,069...149,593,239
Ensembl chr 5:149,553,724...149,593,111
JBrowse link
G Cdk9 cyclin-dependent kinase 9 located_in IEA
ISO
GO_REF:0000107 Ensembl
RGD
GO_REF:0000052 GO_REF:0000107 NCBI chr 3:15,996,467...16,001,315
Ensembl chr 3:15,996,468...16,002,410
JBrowse link
G Cma1 chymase 1 located_in IEA
ISO
GO_REF:0000107 Ensembl
RGD
GO_REF:0000052 GO_REF:0000107 NCBI chr15:29,417,451...29,420,233
Ensembl chr15:29,417,451...29,420,233
JBrowse link
G Ctsh cathepsin H located_in ISO
IEA
GO_REF:0000107 RGD
Ensembl
GO_REF:0000052 GO_REF:0000107 NCBI chr 8:90,608,941...90,627,824
Ensembl chr 8:90,608,941...90,627,824
JBrowse link
G Dcp1a decapping mRNA 1A located_in ISO RGD GO_REF:0000052 NCBI chr16:5,656,960...5,702,151
Ensembl chr16:5,656,773...5,702,140
JBrowse link
G Dcp2 decapping mRNA 2 located_in ISO RGD GO_REF:0000052 NCBI chr18:36,750,732...36,787,067
Ensembl chr18:36,750,732...36,788,557
JBrowse link
G Ddx6 DEAD-box helicase 6 located_in ISO RGD GO_REF:0000052 NCBI chr 8:44,931,127...44,967,773
Ensembl chr 8:44,931,974...44,964,405
JBrowse link
G Dhx9 DExH-box helicase 9 located_in ISO (PMID:10198287), (PMID:15121898) RGD PMID:10198287 PMID:15121898 NCBI chr13:65,602,322...65,639,098
Ensembl chr13:65,602,323...65,639,069
JBrowse link
G Dync1i1 dynein cytoplasmic 1 intermediate chain 1 located_in ISO
IEA
(PMID:15121898)
GO_REF:0000107
RGD
Ensembl
PMID:15121898 GO_REF:0000107 NCBI chr 4:33,852,597...34,166,159
Ensembl chr 4:33,852,927...34,166,149
JBrowse link
G Edc3 enhancer of mRNA decapping 3 located_in ISO RGD GO_REF:0000052 NCBI chr 8:58,106,147...58,151,685
Ensembl chr 8:58,106,175...58,151,671
JBrowse link
G Edc4 enhancer of mRNA decapping 4 located_in ISO RGD GO_REF:0000052 NCBI chr19:33,774,062...33,786,054
Ensembl chr19:33,774,055...33,787,758
JBrowse link
G Eid1 EP300 interacting inhibitor of differentiation 1 located_in ISO
IEA
GO_REF:0000107 RGD
Ensembl
GO_REF:0000052 GO_REF:0000107 NCBI chr 3:112,922,961...112,924,680
Ensembl chr 3:112,922,668...112,924,752
JBrowse link
G Eif4e eukaryotic translation initiation factor 4E located_in ISO RGD GO_REF:0000052 NCBI chr 2:227,066,519...227,099,261
Ensembl chr 2:227,066,673...227,098,683
JBrowse link
G Flg filaggrin located_in ISO RGD GO_REF:0000052 NCBI chr 2:178,884,793...178,912,986 JBrowse link
G Fmr1 fragile X messenger ribonucleoprotein 1 located_in ISO
IDA
(PMID:15121898), (PMID:15380484), (PMID:18093976)
(MGI:3798322|PMID:18539120)
PMID:16098134
RGD PMID:15121898 PMID:15380484 PMID:18093976 PMID:18539120 PMID:16098134 MGI:3798322, RGD:1601176 NCBI chr  X:147,240,239...147,278,057
Ensembl chr  X:147,240,301...147,278,050
JBrowse link
G Fxr1 FMR1 autosomal homolog 1 is_active_in
located_in
ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000044
(PMID:32706158)
UniProt
RGD
PMID:32706158 GO_REF:0000024 GO_REF:0000044 NCBI chr 2:116,884,167...116,937,590
Ensembl chr 2:116,884,248...116,937,590
JBrowse link
G Gabpb1 GA binding protein transcription factor subunit beta 1 located_in ISO RGD GO_REF:0000052 NCBI chr 3:113,879,972...113,924,742
Ensembl chr 3:113,879,973...113,923,696
JBrowse link
G Ghr growth hormone receptor located_in IEA
ISO
GO_REF:0000107 Ensembl
RGD
GO_REF:0000052 GO_REF:0000107 NCBI chr 2:52,541,452...52,804,960
Ensembl chr 2:52,542,594...52,804,735
JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U located_in ISO
IEA
(PMID:15121898)
GO_REF:0000118
GO_REF:0000107
RGD
TreeGrafter
Ensembl
PMID:15121898 GO_REF:0000107 GO_REF:0000118 NCBI chr13:90,069,058...90,086,905
Ensembl chr13:90,074,181...90,086,588
JBrowse link
G Hoxd10 homeo box D10 located_in IEA
ISO
GO_REF:0000107 Ensembl
RGD
GO_REF:0000052 GO_REF:0000107 NCBI chr 3:59,594,516...59,597,725
Ensembl chr 3:59,594,516...59,597,725
JBrowse link
G Ina internexin neuronal intermediate filament protein, alpha located_in IEA
ISO
GO_REF:0000107
(PMID:15121898)
Ensembl
RGD
PMID:15121898 GO_REF:0000107 NCBI chr 1:245,896,775...245,908,330
Ensembl chr 1:245,896,775...245,908,330
JBrowse link
G Iqgap1 IQ motif containing GTPase activating protein 1 located_in ISO (PMID:15121898) RGD PMID:15121898 NCBI chr 1:134,679,581...134,769,776
Ensembl chr 1:134,679,586...134,769,755
JBrowse link
G Khnyn KH and NYN domain containing is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:29,365,399...29,379,650
Ensembl chr15:29,365,260...29,376,967
JBrowse link
G Lsm14a LSM14A mRNA processing body assembly factor located_in ISO RGD GO_REF:0000052 NCBI chr 1:86,964,800...87,009,325
Ensembl chr 1:86,964,828...87,009,276
JBrowse link
G Mapt microtubule-associated protein tau located_in ISO (PMID:15121898) RGD PMID:15121898 NCBI chr10:89,138,644...89,236,137
Ensembl chr10:89,138,627...89,236,129
JBrowse link
G Mov10 Mov10 RNA helicase located_in ISO (PMID:30122351) RGD PMID:30122351 NCBI chr 2:192,292,041...192,315,142
Ensembl chr 2:192,293,470...192,315,083
JBrowse link
G Myh1 myosin heavy chain 1 located_in ISO (PMID:15121898) RGD PMID:15121898 NCBI chr10:51,885,913...51,909,699
Ensembl chr10:51,885,913...51,946,295
JBrowse link
G Ncl nucleolin located_in ISO
IEA
(PMID:15121898)
GO_REF:0000107
RGD
Ensembl
PMID:15121898 GO_REF:0000052 GO_REF:0000107 NCBI chr 9:86,999,588...87,008,112
Ensembl chr 9:86,998,019...87,008,136
JBrowse link
G Nfkbiz NFKB inhibitor zeta located_in IEA
ISO
GO_REF:0000107 Ensembl
RGD
GO_REF:0000052 GO_REF:0000107 NCBI chr11:44,782,676...44,810,722
Ensembl chr11:44,782,676...44,810,723
JBrowse link
G Nynrin NYN domain and retroviral integrase containing is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:29,332,873...29,355,215
Ensembl chr15:29,332,869...29,355,215
JBrowse link
G Pabpc1 poly(A) binding protein, cytoplasmic 1 located_in ISO (PMID:15121898) RGD PMID:15121898 NCBI chr 7:67,777,438...67,789,731
Ensembl chr 7:67,777,381...67,789,744
JBrowse link
G Patl1 PAT1 homolog 1, processing body mRNA decay factor located_in ISO RGD GO_REF:0000052 NCBI chr 1:208,831,115...208,862,904
Ensembl chr 1:208,831,115...208,862,857
JBrowse link
G Pcbp1 poly(rC) binding protein 1 located_in ISO
IEA
GO_REF:0000107 RGD
Ensembl
GO_REF:0000052 GO_REF:0000107 NCBI chr 4:118,972,698...118,974,705
Ensembl chr 4:118,972,661...118,976,500
JBrowse link
G Poldip3 DNA polymerase delta interacting protein 3 located_in IEA
ISO
GO_REF:0000107 Ensembl
RGD
GO_REF:0000052 GO_REF:0000107 NCBI chr 7:114,274,845...114,303,278
Ensembl chr 7:114,275,085...114,303,271
JBrowse link
G Poli DNA polymerase iota located_in IEA
ISO
GO_REF:0000107 Ensembl
RGD
GO_REF:0000052 GO_REF:0000107 NCBI chr18:64,116,774...64,134,373
Ensembl chr18:64,116,774...64,163,418
JBrowse link
G Ppp6r2 protein phosphatase 6, regulatory subunit 2 located_in ISO
IEA
GO_REF:0000107 RGD
Ensembl
GO_REF:0000052 GO_REF:0000107 NCBI chr 7:120,285,378...120,356,995
Ensembl chr 7:120,285,406...120,356,395
JBrowse link
G Psmc2 proteasome 26S subunit, ATPase 2 located_in IEA
ISO
GO_REF:0000107 Ensembl
RGD
GO_REF:0000052 GO_REF:0000107 NCBI chr 4:13,255,850...13,270,160
Ensembl chr 4:13,255,856...13,270,185
JBrowse link
G Rac1 Rac family small GTPase 1 located_in ISO
IEA
(PMID:15121898)
GO_REF:0000107
RGD
Ensembl
PMID:15121898 GO_REF:0000107 NCBI chr12:11,037,028...11,057,251
Ensembl chr12:11,036,698...11,057,251
JBrowse link
G Rbm20 RNA binding motif protein 20 located_in IDA
ISO
PMID:35394688
(PMID:33188278)
(PMID:33188278), (PMID:34732726), (PMID:35427468)
(MGI:6885606|PMID:35041844), (MGI:7266785|PMID:35394688)
RGD PMID:33188278 PMID:34732726 PMID:35041844 PMID:35394688 PMID:35427468 More... MGI:6885606 MGI:7266785, RGD:152025505 NCBI chr 1:252,683,760...252,907,465
Ensembl chr 1:252,683,771...252,886,060
JBrowse link
G Rock2 Rho-associated coiled-coil containing protein kinase 2 located_in ISO
IEA
(PMID:15121898)
GO_REF:0000107
RGD
Ensembl
PMID:15121898 GO_REF:0000107 NCBI chr 6:39,679,116...39,774,033
Ensembl chr 6:39,679,082...39,774,031
JBrowse link
G Rpl28 ribosomal protein L28 located_in ISO (PMID:15121898) RGD PMID:15121898 NCBI chr 1:69,052,148...69,054,735
Ensembl chr 1:69,053,203...69,055,032
JBrowse link
G Rpl6 ribosomal protein L6 located_in ISO (PMID:15121898) RGD PMID:15121898 NCBI chr12:35,347,493...35,352,011
Ensembl chr12:35,347,497...35,351,921
JBrowse link
G Rplp0 ribosomal protein lateral stalk subunit P0 located_in ISO (PMID:15121898) RGD PMID:15121898 NCBI chr12:41,054,363...41,057,632
Ensembl chr12:41,054,179...41,057,632
JBrowse link
G Rps4x ribosomal protein S4, X-linked located_in ISO (PMID:15121898) RGD PMID:15121898 NCBI chr  X:67,298,522...67,302,965
Ensembl chr  X:67,298,525...67,303,019
Ensembl chr 4:67,298,525...67,303,019
JBrowse link
G Rps6 ribosomal protein S6 located_in ISO (PMID:15121898) RGD PMID:15121898 NCBI chr 5:101,371,716...101,374,576
Ensembl chr 5:101,371,136...101,374,602
Ensembl chr 5:101,371,136...101,374,602
JBrowse link
G Sarnp SAP domain containing ribonucleoprotein located_in ISO
IEA
GO_REF:0000107 RGD
Ensembl
GO_REF:0000052 GO_REF:0000107 NCBI chr 7:1,251,096...1,305,335
Ensembl chr 7:1,251,098...1,305,332
JBrowse link
G Serpinb1a serpin family B member 1A located_in ISO RGD GO_REF:0000052 NCBI chr17:31,590,695...31,599,102
Ensembl chr17:31,590,677...31,599,102
JBrowse link
G Shb SH2 domain containing adaptor protein B located_in IEA
ISO
GO_REF:0000107 Ensembl
RGD
GO_REF:0000052 GO_REF:0000107 NCBI chr 5:59,678,066...59,785,443
Ensembl chr 5:59,678,216...59,785,538
JBrowse link
G Slc39a2 solute carrier family 39 member 2 located_in ISO RGD GO_REF:0000052 NCBI chr15:24,590,738...24,592,850
Ensembl chr15:24,590,738...24,592,850
JBrowse link
G Smn1 survival of motor neuron 1, telomeric located_in ISS
ISO
GO_REF:0000024
(PMID:18093976)
UniProt
RGD
PMID:18093976 GO_REF:0000024 NCBI chr 2:31,490,018...31,501,065
Ensembl chr 2:31,490,015...31,501,060
JBrowse link
G Sncaip synuclein, alpha interacting protein located_in IEA
ISO
GO_REF:0000107 Ensembl
RGD
GO_REF:0000052 GO_REF:0000107 NCBI chr18:46,205,846...46,343,932
Ensembl chr18:46,207,152...46,343,929
JBrowse link
G Snrpb2 small nuclear ribonucleoprotein polypeptide B2 located_in ISO RGD GO_REF:0000052 NCBI chr 3:130,399,239...130,408,821
Ensembl chr 3:130,399,248...130,408,812
JBrowse link
G Socs1 suppressor of cytokine signaling 1 located_in ISO
IEA
GO_REF:0000107 RGD
Ensembl
GO_REF:0000052 GO_REF:0000107 NCBI chr10:4,882,651...4,884,342
Ensembl chr10:4,882,560...4,884,383
JBrowse link
G Stau1 staufen double-stranded RNA binding protein 1 located_in ISO (PMID:15121898) RGD PMID:15121898 NCBI chr 3:155,680,000...155,725,969
Ensembl chr 3:155,680,000...155,725,909
JBrowse link
G Taf5l1 TATA-box binding protein associated factor 5 like 1 located_in ISO RGD GO_REF:0000052 NCBI chr19:51,991,704...52,011,001
Ensembl chr19:51,991,708...52,011,295
JBrowse link
G Tstd1 thiosulfate sulfurtransferase like domain containing 1 located_in IEA
ISO
GO_REF:0000107 Ensembl
RGD
GO_REF:0000052 GO_REF:0000107 NCBI chr13:83,853,421...83,854,875
Ensembl chr13:83,822,035...83,854,885
JBrowse link
G Tuba1a tubulin, alpha 1A located_in ISO (PMID:15121898) RGD PMID:15121898 NCBI chr 7:130,113,214...130,116,880
Ensembl chr 7:130,081,032...130,196,186
JBrowse link
G Tubb5 tubulin, beta 5 class I located_in ISO (PMID:15121898) RGD PMID:15121898 NCBI chr20:2,912,779...2,916,928
Ensembl chr20:2,912,778...2,916,940
JBrowse link
G Tut4 terminal uridylyl transferase 4 located_in ISO (PMID:30122351) RGD PMID:30122351 NCBI chr 5:123,201,723...123,306,582
Ensembl chr 5:123,203,003...123,306,465
JBrowse link
G Upf2 UPF2, regulator of nonsense mediated mRNA decay located_in ISO
IEA
GO_REF:0000107 RGD
Ensembl
GO_REF:0000052 GO_REF:0000107 NCBI chr17:72,224,575...72,335,896
Ensembl chr17:72,225,316...72,335,855
JBrowse link
G Usp3 ubiquitin specific peptidase 3 located_in IEA
ISO
GO_REF:0000107 Ensembl
RGD
GO_REF:0000052 GO_REF:0000107 NCBI chr 8:67,078,249...67,154,109
Ensembl chr 8:67,079,927...67,154,111
JBrowse link
G Ythdf2 YTH N6-methyladenosine RNA binding protein F2 located_in ISO RGD GO_REF:0000052 NCBI chr 5:144,381,426...144,407,126
Ensembl chr 5:144,381,431...144,408,144
JBrowse link
G Zar1 zygote arrest 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr14:35,193,446...35,197,382
Ensembl chr14:35,193,446...35,197,382
JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A located_in
is_active_in
ISO
IBA
GO_REF:0000033 RGD
GO_Central
GO_REF:0000033 GO_REF:0000052 NCBI chr 5:137,376,562...137,385,351
Ensembl chr 5:137,376,564...137,385,351
JBrowse link
G Zc3h12b zinc finger CCCH-type containing 12B is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:60,615,616...60,849,278
Ensembl chr  X:60,615,682...60,844,832
JBrowse link
G Zc3h12c zinc finger CCCH type containing 12C is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:52,443,791...52,508,643
Ensembl chr 8:52,448,320...52,504,315
JBrowse link
G Zc3h12d zinc finger CCCH type containing 12D located_in
is_active_in
ISO
IBA
GO_REF:0000033 RGD
GO_Central
GO_REF:0000033 GO_REF:0000052 NCBI chr 1:2,313,110...2,348,820
Ensembl chr 1:2,314,324...2,348,819
JBrowse link
cytoplasmic stress granule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ago2 argonaute RISC catalytic component 2 IDA MMO:0000686 RGD PMID:30404558 RGD:401900732 NCBI chr 7:105,018,202...105,105,118
Ensembl chr 7:105,029,120...105,104,974
JBrowse link
G Atxn2 ataxin 2 located_in
is_active_in
ISO
IBA
(PMID:17392519)
GO_REF:0000033
RGD
GO_Central
PMID:17392519 GO_REF:0000033 NCBI chr12:34,754,132...34,851,175
Ensembl chr12:34,754,137...34,851,479
JBrowse link
G Atxn2l ataxin 2-like located_in
is_active_in
ISO
IBA
(PMID:23209657)
GO_REF:0000033
RGD
GO_Central
PMID:23209657 GO_REF:0000033 NCBI chr 1:181,078,293...181,090,079
Ensembl chr 1:181,078,288...181,089,686
JBrowse link
G Bpi bactericidal/permeability-increasing protein located_in ISO (PMID:1937776) RGD PMID:1937776 NCBI chr 3:146,909,626...146,936,487
Ensembl chr 3:146,909,629...146,936,221
JBrowse link
G Caprin1 cell cycle associated protein 1 located_in IDA
IEA
ISO
PMID:20516077
GO_REF:0000107
(MGI:5296435|PMID:21933836)
Ensembl
RGD
PMID:21933836 PMID:20516077 GO_REF:0000107 MGI:5296435, RGD:8554681 NCBI chr 3:90,152,305...90,230,447
Ensembl chr 3:90,153,620...90,230,502
JBrowse link
G Casc3 CASC3 exon junction complex subunit located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:83,769,014...83,788,966
Ensembl chr10:83,769,001...83,788,966
JBrowse link
G Celf1 CUGBP, Elav-like family member 1 located_in ISO (PMID:18164289) RGD PMID:18164289 NCBI chr 3:76,924,591...76,999,429
Ensembl chr 3:76,924,613...76,999,426
JBrowse link
G Cirbp cold inducible RNA binding protein located_in ISS
ISO
GO_REF:0000024
(MGI:4418610|PMID:17967451)
UniProt
RGD
PMID:17967451 GO_REF:0000024 MGI:4418610 NCBI chr 7:9,533,857...9,538,899
Ensembl chr 7:9,424,178...9,538,818
JBrowse link
G Csde1 cold shock domain containing E1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 2:190,546,015...190,582,787
Ensembl chr 2:190,554,980...190,582,784
JBrowse link
G Ctsg cathepsin G located_in ISO
IEA
(PMID:1937776)
GO_REF:0000107
RGD
Ensembl
PMID:1937776 GO_REF:0000107 NCBI chr15:29,930,988...29,937,353
Ensembl chr15:29,931,003...29,937,353
JBrowse link
G Dazap2 DAZ associated protein 2 located_in ISO
ISS
(PMID:17984221), (PMID:33591310)
GO_REF:0000024
RGD
UniProt
PMID:17984221 PMID:33591310 GO_REF:0000024 NCBI chr 7:131,714,749...131,720,266
Ensembl chr 7:131,714,745...131,720,265
JBrowse link
G Ddx1 DEAD-box helicase 1 located_in ISO
ISS
(PMID:18335541)
(MGI:5296435|PMID:21933836)
GO_REF:0000024
RGD
UniProt
PMID:18335541 PMID:21933836 GO_REF:0000024 MGI:5296435 NCBI chr 6:35,996,469...36,027,340
Ensembl chr 6:35,996,469...36,027,365
JBrowse link
G Ddx19a DEAD-box helicase 19A is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:38,942,497...38,962,853
Ensembl chr19:38,942,496...38,962,854
JBrowse link
G Ddx19b DEAD-box helicase 19B is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:38,968,215...38,998,907
Ensembl chr19:38,968,215...38,997,259
JBrowse link
G Ddx25 DEAD-box helicase 25 is_active_in
located_in
IBA
IEA
GO_REF:0000033
GO_REF:0000118
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr 8:33,894,224...33,910,377
Ensembl chr 8:33,894,232...33,921,764
JBrowse link
G Ddx3x DEAD-box helicase 3, X-linked located_in ISO (PMID:18596238), (PMID:21883093)
(MGI:6368386|PMID:31511697)
RGD PMID:18596238 PMID:21883093 PMID:31511697 MGI:6368386 NCBI chr  X:9,479,532...9,493,169
Ensembl chr  X:9,479,532...9,493,168
JBrowse link
G Ddx6 DEAD-box helicase 6 located_in
is_active_in
ISO
IBA
(PMID:17392519), (PMID:26184334)
GO_REF:0000033
RGD
GO_Central
PMID:17392519 PMID:26184334 GO_REF:0000033 NCBI chr 8:44,931,127...44,967,773
Ensembl chr 8:44,931,974...44,964,405
JBrowse link
G Dhx36 DEAH-box helicase 36 located_in ISO (PMID:18854321) RGD PMID:18854321 NCBI chr 2:146,856,469...146,894,577
Ensembl chr 2:146,856,469...146,894,572
JBrowse link
G Dyrk3 dual specificity tyrosine phosphorylation regulated kinase 3 located_in ISS
ISO
IEA
GO_REF:0000024
(PMID:23415227), (PMID:29973724)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:23415227 PMID:29973724 GO_REF:0000024 GO_REF:0000107 NCBI chr13:42,594,120...42,604,898
Ensembl chr13:42,594,121...42,604,778
JBrowse link
G Eif2s1 eukaryotic translation initiation factor 2 subunit alpha located_in ISS
ISO
GO_REF:0000024
(MGI:4820495|PMID:19861488)
UniProt
RGD
PMID:19861488 GO_REF:0000024 MGI:4820495 NCBI chr 6:97,672,829...97,697,499
Ensembl chr 6:97,672,766...97,706,225
JBrowse link
G Eif3b eukaryotic translation initiation factor 3, subunit B located_in ISS
ISO
GO_REF:0000024
(PMID:17984221)
UniProt
RGD
PMID:17984221 GO_REF:0000024 NCBI chr12:14,196,403...14,220,865
Ensembl chr12:14,196,403...14,220,886
JBrowse link
G Eif4e eukaryotic translation initiation factor 4E located_in ISO
IEA
ISS
(PMID:21883093)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:21883093 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:227,066,519...227,099,261
Ensembl chr 2:227,066,673...227,098,683
JBrowse link
G Eif4g1 eukaryotic translation initiation factor 4 gamma 1 located_in ISO (PMID:17984221) RGD PMID:17984221 NCBI chr11:80,221,919...80,241,958
Ensembl chr11:80,221,919...80,241,941
JBrowse link
G Elavl1 ELAV like RNA binding protein 1 located_in ISS
ISO
GO_REF:0000024
(MGI:6105829|PMID:27616329), (MGI:6148443|PMID:27430620)
UniProt
RGD
PMID:27430620 PMID:27616329 GO_REF:0000024 MGI:6105829 MGI:6148443 NCBI chr12:2,640,936...2,684,787
Ensembl chr12:2,645,061...2,684,784
JBrowse link
G Endov endonuclease V located_in ISO (PMID:27573237)
(PMID:31703097)
RGD PMID:27573237 PMID:31703097 NCBI chr10:104,760,059...104,777,732
Ensembl chr10:104,760,137...104,775,969
JBrowse link
G ENSRNOG00000066881 located_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr13:2,852,897...2,854,568 JBrowse link
G Fmr1 fragile X messenger ribonucleoprotein 1 is_active_in
located_in
IDA
IBA
IEA
ISO
GO_REF:0000033
GO_REF:0000044
(PMID:12417522)
(MGI:5296435|PMID:21933836)
GO_Central
UniProt
RGD
PMID:12417522 PMID:21933836 PMID:16510718 PMID:16919243 GO_REF:0000033 GO_REF:0000044 MGI:5296435, RGD:11667962, RGD:10059582 NCBI chr  X:147,240,239...147,278,057
Ensembl chr  X:147,240,301...147,278,050
JBrowse link
G Fxr1 FMR1 autosomal homolog 1 is_active_in
located_in
ISO
IBA
IEA
(PMID:12417522), (PMID:20417602)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:12417522 PMID:20417602 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:116,884,167...116,937,590
Ensembl chr 2:116,884,248...116,937,590
JBrowse link
G Fxr2 FMR1 autosomal homolog 2 is_active_in ISO
IBA
(PMID:12417522)
GO_REF:0000033
RGD
GO_Central
PMID:12417522 GO_REF:0000033 NCBI chr10:54,350,577...54,370,964
Ensembl chr10:54,350,131...54,370,964
JBrowse link
G G3bp1 G3BP stress granule assembly factor 1 located_in
is_active_in
ISO (PMID:30404792)
(PMID:32302570), (PMID:32302571), (PMID:32302572), (PMID:37379838)
(MGI:3807625|PMID:18625844), (MGI:6148443|PMID:27430620), (MGI:6693946|PMID:32535204)
RGD PMID:18625844 PMID:27430620 PMID:30404792 PMID:32302570 PMID:32302571 More... MGI:3807625 MGI:6148443 MGI:6693946 NCBI chr10:39,586,864...39,620,268
Ensembl chr10:39,586,864...39,620,268
JBrowse link
G G3bp2 G3BP stress granule assembly factor 2 located_in ISO (PMID:23279204) RGD PMID:23279204 NCBI chr14:15,932,403...16,020,555
Ensembl chr14:15,987,417...16,020,548
JBrowse link
G Gigyf2 GRB10 interacting GYF protein 2 located_in ISO (PMID:20696395) RGD PMID:20696395 NCBI chr 9:88,001,212...88,127,040
Ensembl chr 9:88,001,301...88,125,715
JBrowse link
G Grb7 growth factor receptor bound protein 7 located_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:5284766|PMID:18273060)
UniProt
Ensembl
RGD
PMID:18273060 GO_REF:0000024 GO_REF:0000107 MGI:5284766 NCBI chr10:83,443,387...83,453,057
Ensembl chr10:83,444,004...83,453,052
JBrowse link
G Habp4 hyaluronan binding protein 4 located_in ISS
ISO
GO_REF:0000024
(PMID:21771594)
UniProt
RGD
PMID:21771594 GO_REF:0000024 NCBI chr17:934,931...957,604
Ensembl chr17:935,654...957,565
JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 located_in ISO (PMID:33591310) RGD PMID:33591310 NCBI chr 4:67,439,327...67,619,223
Ensembl chr 4:67,440,501...67,619,223
JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K located_in ISO
IEA
(MGI:6148443|PMID:27430620)
GO_REF:0000107
RGD
Ensembl
PMID:27430620 GO_REF:0000107 MGI:6148443 NCBI chr17:6,262,936...6,275,001
Ensembl chr17:6,262,998...6,274,997
JBrowse link
G Igf2bp1 insulin-like growth factor 2 mRNA binding protein 1 located_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000044
(PMID:17101699), (PMID:29476152)
UniProt
RGD
PMID:17101699 PMID:29476152 GO_REF:0000024 GO_REF:0000044 NCBI chr10:80,908,300...80,951,097
Ensembl chr10:80,908,076...80,951,129
JBrowse link
G Igf2bp2 insulin-like growth factor 2 mRNA binding protein 2 located_in ISO (PMID:29476152) RGD PMID:29476152 NCBI chr11:78,874,402...78,974,392
Ensembl chr11:78,874,414...78,974,377
JBrowse link
G Igf2bp3 insulin-like growth factor 2 mRNA binding protein 3 located_in ISO (PMID:29476152) RGD PMID:29476152 NCBI chr 4:78,060,494...78,195,007
Ensembl chr 4:78,060,494...78,194,865
JBrowse link
G Khsrp KH-type splicing regulatory protein located_in IEA
ISO
GO_REF:0000107
(MGI:5296435|PMID:21933836)
Ensembl
RGD
PMID:21933836 GO_REF:0000107 MGI:5296435 NCBI chr 9:1,862,555...1,872,403
Ensembl chr 9:1,862,899...1,872,451
JBrowse link
G Kpna2 karyopherin subunit alpha 2 located_in ISO (MGI:6148443|PMID:27430620) RGD PMID:27430620 MGI:6148443 NCBI chr10:91,933,951...91,946,115
Ensembl chr10:91,933,951...91,946,150
JBrowse link
G Kpnb1 karyopherin subunit beta 1 located_in IEA
ISO
GO_REF:0000107
(MGI:6148443|PMID:27430620)
Ensembl
RGD
PMID:27430620 GO_REF:0000107 MGI:6148443 NCBI chr10:82,145,662...82,174,437
Ensembl chr10:82,145,420...82,174,605
JBrowse link
G Larp1 La ribonucleoprotein 1, translational regulator located_in
is_active_in
ISO
IBA
(PMID:25940091)
GO_REF:0000033
RGD
GO_Central
PMID:25940091 GO_REF:0000033 NCBI chr10:42,191,378...42,246,361
Ensembl chr10:42,191,325...42,243,371
JBrowse link
G Larp1b La ribonucleoprotein 1B located_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 2:123,936,057...123,969,254
Ensembl chr 2:123,935,983...123,968,896
JBrowse link
G Larp4 La ribonucleoprotein 4 located_in ISO (PMID:21098120) RGD PMID:21098120 NCBI chr 7:131,104,470...131,152,692
Ensembl chr 7:131,101,564...131,150,811
JBrowse link
G Larp4b La ribonucleoprotein 4B located_in
is_active_in
ISO
IBA
(PMID:20573744)
GO_REF:0000033
RGD
GO_Central
PMID:20573744 GO_REF:0000033 NCBI chr17:61,138,663...61,217,423
Ensembl chr17:61,138,709...61,187,960
JBrowse link
G Lin28a lin-28 homolog A located_in ISO (PMID:17617744) RGD PMID:17617744 NCBI chr 5:146,227,119...146,244,122
Ensembl chr 5:146,227,119...146,244,122
JBrowse link
G LOC100359916 heterogeneous nuclear ribonucleoprotein K-like located_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 5:58,668,326...58,670,222
Ensembl chr 5:58,668,327...58,670,220
JBrowse link
G LOC100364335 cold shock domain-containing protein E1-like located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr13:78,477,560...78,481,251 JBrowse link
G Lsm14a LSM14A mRNA processing body assembly factor located_in ISO (PMID:16484376), (PMID:17074753) RGD PMID:16484376 PMID:17074753 NCBI chr 1:86,964,800...87,009,325
Ensembl chr 1:86,964,828...87,009,276
JBrowse link
G Mbnl1 muscleblind-like splicing regulator 1 located_in ISO
IEA
(PMID:18335541)
GO_REF:0000107
RGD
Ensembl
PMID:18335541 GO_REF:0000107 NCBI chr 2:144,639,819...144,814,395
Ensembl chr 2:144,670,285...144,814,368
JBrowse link
G Mcrip1 MAPK regulated co-repressor interacting protein 1 located_in ISO
IEA
ISS
(PMID:26184334)
GO_REF:0000044
GO_REF:0000024
RGD
UniProt
PMID:26184334 GO_REF:0000024 GO_REF:0000044 NCBI chr10:105,820,656...105,828,146
Ensembl chr10:105,820,656...105,828,271
JBrowse link
G Mcrip2 MAPK regulated co-repressor interacting protein 2 located_in ISO (PMID:26184334) RGD PMID:26184334 NCBI chr10:14,883,813...14,888,784
Ensembl chr10:14,883,813...14,894,021
JBrowse link
G Nanos3 nanos C2HC-type zinc finger 3 located_in ISO (MGI:4820495|PMID:19861488) RGD PMID:19861488 MGI:4820495 NCBI chr19:23,978,465...23,988,933
Ensembl chr19:23,985,504...23,988,932
JBrowse link
G Nufip2 nuclear FMR1 interacting protein 2 located_in
is_active_in
ISO
IBA
(PMID:26184334)
GO_REF:0000033
RGD
GO_Central
PMID:26184334 GO_REF:0000033 NCBI chr10:62,574,922...62,607,729
Ensembl chr10:62,574,882...62,600,346
JBrowse link
G Nxf1 nuclear RNA export factor 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:205,655,442...205,668,637
Ensembl chr 1:205,655,375...205,668,636
JBrowse link
G Ogfod1 2-oxoglutarate and iron-dependent oxygenase domain containing 1 located_in ISO (PMID:24550447) RGD PMID:24550447 NCBI chr19:10,945,031...10,974,602
Ensembl chr19:10,946,018...10,975,119
JBrowse link
G Pabpc1 poly(A) binding protein, cytoplasmic 1 located_in
is_active_in
ISS
IBA
ISO
GO_REF:0000024
GO_REF:0000033
(PMID:21883093), (PMID:21940797)
UniProt
GO_Central
RGD
PMID:21883093 PMID:21940797 GO_REF:0000024 GO_REF:0000033 NCBI chr 7:67,777,438...67,789,731
Ensembl chr 7:67,777,381...67,789,744
JBrowse link
G Pabpc1l poly(A) binding protein, cytoplasmic 1-like is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:152,692,825...152,725,997
Ensembl chr 3:152,693,700...152,725,997
JBrowse link
G Pabpc2 poly(A) binding protein, cytoplasmic 2 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:31,654,218...31,656,486
Ensembl chr18:31,654,218...31,656,286
JBrowse link
G Pabpc4 poly(A) binding protein, cytoplasmic 4 located_in
is_active_in
ISO
IBA
(PMID:21940797)
GO_REF:0000033
RGD
GO_Central
PMID:21940797 GO_REF:0000033 NCBI chr 5:135,563,142...135,578,985
Ensembl chr 5:135,563,562...135,578,979
JBrowse link
G Pabpc4-ps1 poly(A) binding protein, cytoplasmic 4, pseudogene 1 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:3,116,136...3,119,449
Ensembl chr12:3,116,721...3,118,626
JBrowse link
G Pabpc4l poly(A) binding protein, cytoplasmic 4-like is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:129,807,755...129,809,745
Ensembl chr 2:129,807,755...129,809,745
JBrowse link
G Pabpc5 poly A binding protein, cytoplasmic 5 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:85,637,763...85,641,235
Ensembl chr  X:85,638,574...85,639,722
JBrowse link
G Pabpc6 poly(A) binding protein, cytoplasmic 6 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:51,045,264...51,048,340
Ensembl chr 1:51,045,233...51,048,340
JBrowse link
G Pqbp1 polyglutamine binding protein 1 located_in ISO (MGI:5296435|PMID:21933836) RGD PMID:21933836 MGI:5296435 NCBI chr  X:14,603,516...14,608,091
Ensembl chr  X:14,603,539...14,608,087
JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 located_in IEA
ISO
GO_REF:0000107
(MGI:6148443|PMID:27430620)
Ensembl
RGD
PMID:27430620 GO_REF:0000107 MGI:6148443 NCBI chr 5:119,807,992...119,879,987
Ensembl chr 5:119,813,226...119,879,543
JBrowse link
G Pum1 pumilio RNA-binding family member 1 located_in ISO (PMID:25340845) RGD PMID:25340845 NCBI chr 5:142,836,933...142,954,331
Ensembl chr 5:142,837,127...142,954,039
JBrowse link
G Pum2 pumilio RNA-binding family member 2 located_in ISO (PMID:25340845)
(MGI:3629346|PMID:16775137), (MGI:4820495|PMID:19861488)
RGD PMID:16775137 PMID:19861488 PMID:25340845 MGI:3629346 MGI:4820495 NCBI chr 6:31,462,879...31,542,976
Ensembl chr 6:31,462,872...31,542,976
JBrowse link
G Qki QKI, KH domain containing RNA binding is_active_in ISO (PMID:37379838) RGD PMID:37379838 NCBI chr 1:50,387,716...50,501,568
Ensembl chr 1:50,387,698...50,498,831
JBrowse link
G Rbfox1 RNA binding fox-1 homolog 1 located_in ISO (PMID:29358748) RGD PMID:29358748 NCBI chr10:8,152,198...10,248,120
Ensembl chr10:8,152,198...9,686,659
JBrowse link
G Rbm4 RNA binding motif protein 4 located_in ISO (PMID:17284590) RGD PMID:17284590 NCBI chr 1:202,078,442...202,087,506
Ensembl chr 1:202,085,279...202,105,380
JBrowse link
G Rbpms RNA binding protein, mRNA processing factor located_in ISO (PMID:24860013), (PMID:26347403) RGD PMID:24860013 PMID:26347403 NCBI chr16:58,239,370...58,395,424
Ensembl chr16:58,239,474...58,395,426
JBrowse link
G Rbpms2 RNA binding protein, mRNA processing factor 2 located_in ISO (PMID:24860013) RGD PMID:24860013 NCBI chr 8:66,153,169...66,184,278
Ensembl chr 8:66,153,593...66,184,268
JBrowse link
G Rc3h1 ring finger and CCCH-type domains 1 located_in ISO (MGI:3580753|PMID:15917799), (MGI:4819285|PMID:20639877), (MGI:5706859|PMID:26000482), (MGI:5751631|PMID:26255671) RGD PMID:15917799 PMID:20639877 PMID:26000482 PMID:26255671 MGI:3580753 MGI:4819285 MGI:5706859 MGI:5751631 NCBI chr13:73,174,075...73,245,762
Ensembl chr13:73,173,946...73,238,839
JBrowse link
G Rc3h2 ring finger and CCCH-type domains 2 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:21,121,531...21,186,711
Ensembl chr 3:21,110,679...21,179,933
JBrowse link
G RGD1359108 similar to RIKEN cDNA 3110043O21 located_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:27037575)
UniProt
Ensembl
RGD
PMID:27037575 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:49,766,340...49,791,434
Ensembl chr 5:49,766,325...49,791,408
JBrowse link
G Rnf135 ring finger protein 135 located_in ISO
ISS
(PMID:23950712)
GO_REF:0000024
RGD
UniProt
PMID:23950712 GO_REF:0000024 NCBI chr10:65,170,560...65,189,791
Ensembl chr10:65,170,560...65,262,804
JBrowse link
G Rock1 Rho-associated coiled-coil containing protein kinase 1 located_in
is_active_in
IEA
IBA
ISO
GO_REF:0000107
GO_REF:0000118
GO_REF:0000033
(MGI:6148443|PMID:27430620)
Ensembl
TreeGrafter
GO_Central
RGD
PMID:27430620 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:6148443 NCBI chr18:1,114,532...1,236,345
Ensembl chr18:1,115,905...1,235,571
JBrowse link
G Rptor regulatory associated protein of MTOR, complex 1 located_in ISO (PMID:25940091) RGD PMID:25940091 NCBI chr10:104,878,487...105,176,986
Ensembl chr10:104,878,487...105,176,983
JBrowse link
G Ssb small RNA binding exonuclease protection factor La is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:54,616,616...54,626,203
Ensembl chr 3:54,616,619...54,626,203
JBrowse link
G Ssbl1 small RNA binding exonuclease protection factor La like 1 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:149,078,162...149,079,669
Ensembl chr 4:149,078,162...149,079,657
JBrowse link
G Stau1 staufen double-stranded RNA binding protein 1 located_in
is_active_in
ISO
IBA
(MGI:4397616|PMID:19825938)
GO_REF:0000033
RGD
GO_Central
PMID:19825938 GO_REF:0000033 MGI:4397616 NCBI chr 3:155,680,000...155,725,969
Ensembl chr 3:155,680,000...155,725,909
JBrowse link
G Stau2 staufen double-stranded RNA binding protein 2 located_in
is_active_in
IDA
IEA
IBA
GO_REF:0000118
GO_REF:0000033
TreeGrafter
GO_Central
RGD
PMID:15525674 GO_REF:0000033 GO_REF:0000118, RGD:10043171 NCBI chr 5:2,840,741...3,084,935
Ensembl chr 5:2,840,765...3,084,929
JBrowse link
G Tia1 TIA1 cytotoxic granule-associated RNA binding protein located_in IDA
ISO
(MGI:5296435|PMID:21933836), (MGI:5302731|PMID:22022532), (MGI:6148443|PMID:27430620), (MGI:6827198|PMID:29298433)
(PMID:21984414), (PMID:8576255)
RGD PMID:8576255 PMID:21933836 PMID:21984414 PMID:22022532 PMID:27430620 More... MGI:5296435 MGI:5302731 MGI:6148443 MGI:6827198, RGD:10059581 NCBI chr 4:118,852,765...118,883,252
Ensembl chr 4:118,852,837...118,880,586
JBrowse link
G Tial1 Tia1 cytotoxic granule-associated RNA binding protein-like 1 located_in IDA
ISO
(MGI:4397616|PMID:19825938), (MGI:4820495|PMID:19861488) RGD PMID:19825938 PMID:19861488 PMID:22555848 MGI:4397616 MGI:4820495, RGD:10059425 NCBI chr 1:183,008,358...183,045,092
Ensembl chr 1:183,009,253...183,031,637
JBrowse link
G Trim21 tripartite motif-containing 21 is_active_in ISO (PMID:36692217) RGD PMID:36692217 NCBI chr 1:156,964,896...156,987,504
Ensembl chr 1:156,964,913...156,987,440
JBrowse link
G Trim25 tripartite motif-containing 25 located_in ISO (PMID:23950712) RGD PMID:23950712 NCBI chr10:73,812,818...73,831,271
Ensembl chr10:73,812,818...73,831,257
JBrowse link
G Vcp valosin-containing protein located_in ISO
ISS
(PMID:29804830)
GO_REF:0000024
RGD
UniProt
PMID:29804830 GO_REF:0000024 NCBI chr 5:57,210,167...57,229,571
Ensembl chr 5:57,210,168...57,229,571
JBrowse link
G Ybx1 Y box binding protein 1 located_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:18335541)
UniProt
Ensembl
RGD
PMID:18335541 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:132,882,137...132,898,885
Ensembl chr 5:132,882,145...132,898,862
JBrowse link
G Ythdf1 YTH N6-methyladenosine RNA binding protein F1 located_in ISO (PMID:32451507) RGD PMID:32451507 NCBI chr 3:168,024,660...168,040,172
Ensembl chr 3:168,024,663...168,040,172
JBrowse link
G Ythdf2 YTH N6-methyladenosine RNA binding protein F2 located_in ISO (PMID:31292544), (PMID:32451507) RGD PMID:31292544 PMID:32451507 NCBI chr 5:144,381,426...144,407,126
Ensembl chr 5:144,381,431...144,408,144
JBrowse link
G Ythdf3 YTH N6-methyladenosine RNA binding protein F3 located_in ISO (PMID:32451507) RGD PMID:32451507 NCBI chr 2:98,350,304...98,384,608
Ensembl chr 2:98,350,588...98,384,606
JBrowse link
G Zfand1 zinc finger AN1-type containing 1 located_in
is_active_in
ISO
IBA
(PMID:29804830)
GO_REF:0000033
RGD
GO_Central
PMID:29804830 GO_REF:0000033 NCBI chr 2:91,444,497...91,457,540
Ensembl chr 2:91,444,508...91,453,246
JBrowse link
G Zfp36 zinc finger protein 36 located_in ISS
ISO
GO_REF:0000024
(PMID:15014438), (PMID:21964062)
UniProt
RGD
PMID:15014438 PMID:21964062 GO_REF:0000024 NCBI chr 1:83,669,084...83,671,564
Ensembl chr 1:83,669,084...83,671,564
JBrowse link
G Znfx1 zinc finger, NFX1-type containing 1 is_active_in ISO (PMID:33876776) RGD PMID:33876776 NCBI chr 3:155,764,073...155,791,777
Ensembl chr 3:155,764,980...155,821,242
JBrowse link
neuronal ribonucleoprotein granule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arc activity-regulated cytoskeleton-associated protein located_in ISO (MGI:5546446|PMID:23936366) RGD PMID:23936366 MGI:5546446 NCBI chr 7:106,555,968...106,559,697
Ensembl chr 7:106,555,785...106,559,378
JBrowse link
G Ckap5 cytoskeleton associated protein 5 located_in ISO (MGI:5546446|PMID:23936366) RGD PMID:23936366 MGI:5546446 NCBI chr 3:77,491,195...77,593,300
Ensembl chr 3:77,491,276...77,593,264
JBrowse link
G Eif4ebp2 eukaryotic translation initiation factor 4E binding protein 2 is_active_in ISO (PMID:30765518) RGD PMID:30765518 NCBI chr20:29,379,444...29,400,110
Ensembl chr20:29,382,668...29,399,946
JBrowse link
G Fmr1 fragile X messenger ribonucleoprotein 1 located_in
is_active_in
ISO
IDA
(MGI:3798322|PMID:18539120), (MGI:5296435|PMID:21933836)
PMID:17881655
(PMID:30765518)
RGD PMID:18539120 PMID:21933836 PMID:30765518 PMID:17881655 MGI:3798322 MGI:5296435, RGD:8553560 NCBI chr  X:147,240,239...147,278,057
Ensembl chr  X:147,240,301...147,278,050
JBrowse link
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 IDA RGD PMID:14523087 RGD:9685480 NCBI chr 4:80,534,659...80,545,297
Ensembl chr 4:80,534,651...80,545,249
JBrowse link
G Hnrnpab heterogeneous nuclear ribonucleoprotein A/B IDA RGD PMID:21471000 RGD:9999187 NCBI chr10:35,857,040...35,862,935
Ensembl chr10:35,857,041...35,863,344
JBrowse link
G Htt huntingtin IDA RGD PMID:22355657 RGD:6902916 NCBI chr14:75,845,836...75,996,094
Ensembl chr14:75,845,836...75,995,070
JBrowse link
G Kif3c kinesin family member 3C located_in IDA PMID:17881655 MGI PMID:17881655 RGD:8553560 NCBI chr 6:26,367,092...26,406,033
Ensembl chr 6:26,366,531...26,406,130
JBrowse link
G Pqbp1 polyglutamine binding protein 1 located_in ISO (MGI:5296435|PMID:21933836) RGD PMID:21933836 MGI:5296435 NCBI chr  X:14,603,516...14,608,091
Ensembl chr  X:14,603,539...14,608,087
JBrowse link
G Uhmk1 U2AF homology motif kinase 1 located_in
is_active_in
ISO
IEA
IBA
(MGI:3835232|PMID:19015237)
GO_REF:0000107
GO_REF:0000118
GO_REF:0000033
RGD
Ensembl
TreeGrafter
GO_Central
PMID:19015237 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:3835232 NCBI chr13:82,396,646...82,416,292
Ensembl chr13:82,401,187...82,416,292
JBrowse link
G Uhmk1l1 U2AF homology motif kinase 1l1 located_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr17:42,241,640...42,243,666 JBrowse link
nuclear stress granule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhx9 DExH-box helicase 9 located_in ISO (PMID:10198287), (PMID:24965446) RGD PMID:10198287 PMID:24965446 NCBI chr13:65,602,322...65,639,098
Ensembl chr13:65,602,323...65,639,069
JBrowse link
G Hsf1 heat shock transcription factor 1 located_in ISO (PMID:10359787), (PMID:10747973), (PMID:11514557), (PMID:12665592), (PMID:14707147), (PMID:25963659) RGD PMID:10359787 PMID:10747973 PMID:11514557 PMID:12665592 PMID:14707147 More... NCBI chr 7:108,196,040...108,223,011
Ensembl chr 7:108,196,056...108,223,011
JBrowse link
G Rbfox1 RNA binding fox-1 homolog 1 located_in ISO (PMID:29358748) RGD PMID:29358748 NCBI chr10:8,152,198...10,248,120
Ensembl chr10:8,152,198...9,686,659
JBrowse link
G Sumo1 small ubiquitin-like modifier 1 located_in ISO
ISS
(PMID:11514557)
GO_REF:0000024
RGD
UniProt
PMID:11514557 GO_REF:0000024 NCBI chr 9:61,078,790...61,108,697
Ensembl chr 9:61,077,435...61,108,761
JBrowse link
G Sympk symplekin scaffold protein located_in ISO (PMID:14707147) RGD PMID:14707147 NCBI chr 1:78,672,372...78,700,684
Ensembl chr 1:78,672,378...78,700,684
JBrowse link
G Tia1 TIA1 cytotoxic granule-associated RNA binding protein located_in ISO (MGI:5302731|PMID:22022532)
(PMID:21984414)
RGD PMID:21984414 PMID:22022532 MGI:5302731 NCBI chr 4:118,852,765...118,883,252
Ensembl chr 4:118,852,837...118,880,586
JBrowse link
P granule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07042226.1 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr  X:144,806,986...144,812,552 JBrowse link
G Ago2 argonaute RISC catalytic component 2 IDA MMO:0000663 RGD PMID:27029769 RGD:11529670 NCBI chr 7:105,018,202...105,105,118
Ensembl chr 7:105,029,120...105,104,974
JBrowse link
G Carhsp1 calcium regulated heat stable protein 1 located_in ISS
ISO
GO_REF:0000024
(MGI:5320273|PMID:21078874)
UniProt
RGD
PMID:21078874 GO_REF:0000024 MGI:5320273 NCBI chr10:6,946,036...6,960,556
Ensembl chr10:6,946,959...7,020,019
JBrowse link
G Ddx3 DEAD-box helicase 3 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:98,520,538...98,523,707
Ensembl chr13:98,520,201...98,524,176
JBrowse link
G Ddx3x DEAD-box helicase 3, X-linked is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:9,479,532...9,493,169
Ensembl chr  X:9,479,532...9,493,168
JBrowse link
G Ddx3y DEAD box helicase 3, Y-linked located_in
is_active_in
IEA
IBA
GO_REF:0000118
GO_REF:0000033
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr  Y:1,115,095...1,135,754
Ensembl chr  Y:1,116,309...1,135,706
JBrowse link
G Ddx4 DEAD-box helicase 4 is_active_in
located_in
IBA
IEA
GO_REF:0000033
GO_REF:0000118
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr 2:44,227,946...44,282,867
Ensembl chr 2:44,227,946...44,282,723
JBrowse link
G ENSRNOG00000063333 located_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr  X:93,293,758...93,294,114 JBrowse link
G Helz helicase with zinc finger is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:92,479,403...92,645,234
Ensembl chr10:92,501,518...92,638,383
JBrowse link
G Henmt1 HEN methyltransferase 1 located_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 2:196,585,732...196,603,700
Ensembl chr 2:196,586,797...196,599,738
JBrowse link
G LOC120100604 small nuclear ribonucleoprotein G-like located_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 2:186,400,521...186,402,953
Ensembl chr 2:186,400,857...186,401,087
JBrowse link
G Mael maelstrom spermatogenic transposon silencer located_in
is_active_in
ISO
IBA
(MGI:3655410|PMID:16787967), (MGI:3813746|PMID:18694567)
GO_REF:0000033
RGD
GO_Central
PMID:16787967 PMID:18694567 GO_REF:0000033 MGI:3655410 MGI:3813746 NCBI chr13:78,457,073...78,496,657
Ensembl chr13:78,457,073...78,496,657
JBrowse link
G Mov10 Mov10 RNA helicase is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:192,292,041...192,315,142
Ensembl chr 2:192,293,470...192,315,083
JBrowse link
G Mov10l1 Mov10 like RNA helicase 1 located_in
is_active_in
ISO
IBA
(MGI:4457283|PMID:20534472)
GO_REF:0000033
RGD
GO_Central
PMID:20534472 GO_REF:0000033 MGI:4457283 NCBI chr 7:120,070,171...120,135,406
Ensembl chr 7:120,070,135...120,134,765
JBrowse link
G Piwil1 piwi-like RNA-mediated gene silencing 1 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:27,949,743...27,970,645
Ensembl chr12:27,949,744...27,970,580
JBrowse link
G Piwil2 piwi-like RNA-mediated gene silencing 2 located_in
is_active_in
ISO
IBA
(MGI:3815367|PMID:18922463), (MGI:4443217|PMID:20439430)
GO_REF:0000033
RGD
GO_Central
PMID:18922463 PMID:20439430 GO_REF:0000033 MGI:3815367 MGI:4443217 NCBI chr15:45,431,402...45,498,034
Ensembl chr15:45,431,703...45,497,702
JBrowse link
G Piwil4 piwi-like RNA-mediated gene silencing 4 located_in
is_active_in
ISS
IEA
IBA
ISO
GO_REF:0000024
GO_REF:0000118
GO_REF:0000033
(MGI:3815367|PMID:18922463)
UniProt
TreeGrafter
GO_Central
RGD
PMID:18922463 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 MGI:3815367 NCBI chr 8:11,536,520...11,579,883
Ensembl chr 8:11,536,520...11,579,761
JBrowse link
G Snrpg small nuclear ribonucleoprotein polypeptide G located_in
is_active_in
IEA
IBA
GO_REF:0000118
GO_REF:0000033
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr 4:118,812,278...118,819,827
Ensembl chr 4:118,812,252...118,819,826
JBrowse link
G Snrpgl1 small nuclear ribonucleoprotein polypeptide G like 1 located_in
is_active_in
IEA
IBA
GO_REF:0000118
GO_REF:0000033
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr 1:87,982,629...87,983,056
Ensembl chr 1:87,982,626...87,983,118
Ensembl chr 4:87,982,626...87,983,118
JBrowse link
G Stk31 serine threonine kinase 31 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:78,370,691...78,467,599
Ensembl chr 4:78,370,649...78,466,240
JBrowse link
G Tdrd1 tudor domain containing 1 located_in
is_active_in
ISO
IBA
(MGI:3691397|PMID:17038506), (MGI:4356231|PMID:19465913), (MGI:4443217|PMID:20439430)
GO_REF:0000033
RGD
GO_Central
PMID:17038506 PMID:19465913 PMID:20439430 GO_REF:0000033 MGI:3691397 MGI:4356231 MGI:4443217 NCBI chr 1:255,871,939...255,919,222
Ensembl chr 1:255,875,887...255,915,871
JBrowse link
G Tdrd5 tudor domain containing 5 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:68,394,180...68,447,745
Ensembl chr13:68,394,061...68,441,319
JBrowse link
G Tdrd6 tudor domain containing 6 located_in
is_active_in
ISO
IBA
(MGI:3604923|PMID:16093322), (MGI:3695528|PMID:17141210)
GO_REF:0000033
RGD
GO_Central
PMID:16093322 PMID:17141210 GO_REF:0000033 MGI:3604923 MGI:3695528 NCBI chr 9:17,344,033...17,359,348
Ensembl chr 9:17,344,026...17,359,344
JBrowse link
G Tdrd7 tudor domain containing 7 located_in
is_active_in
ISO
IBA
(MGI:3695528|PMID:17141210)
GO_REF:0000033
RGD
GO_Central
PMID:17141210 GO_REF:0000033 MGI:3695528 NCBI chr 5:60,238,742...60,312,548
Ensembl chr 5:60,238,678...60,312,544
JBrowse link
G Tdrkh tudor and KH domain containing is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:182,049,175...182,071,516
Ensembl chr 2:182,049,215...182,070,755
JBrowse link
P-body term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC126899.1 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr19:40,146,975...40,147,500 JBrowse link
G Ago1 argonaute RISC component 1 located_in ISO (MGI:4438512|PMID:19898466) RGD PMID:19898466 MGI:4438512 NCBI chr 5:138,722,111...138,757,118
Ensembl chr 5:138,722,111...138,773,546
JBrowse link
G Ago2 argonaute RISC catalytic component 2 located_in IEA
ISO
GO_REF:0000044
(PMID:20616046), (PMID:22915799), (PMID:23125361)
(MGI:4438512|PMID:19898466)
UniProt
RGD
PMID:19898466 PMID:20616046 PMID:22915799 PMID:23125361 GO_REF:0000044 MGI:4438512 NCBI chr 7:105,018,202...105,105,118
Ensembl chr 7:105,029,120...105,104,974
JBrowse link
G Ago3 argonaute RISC catalytic component 3 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 5:138,632,367...138,714,230
Ensembl chr 5:138,639,569...138,714,230
JBrowse link
G Ago4 argonaute RISC component 4 located_in ISO (MGI:4438512|PMID:19898466) RGD PMID:19898466 MGI:4438512 NCBI chr 5:138,780,446...138,825,898
Ensembl chr 5:138,783,069...138,825,632
JBrowse link
G Aicda activation-induced cytidine deaminase is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:155,774,132...155,783,972
Ensembl chr 4:155,774,132...155,783,972
JBrowse link
G Ajuba ajuba LIM protein located_in
is_active_in
ISO
IBA
(PMID:20616046)
GO_REF:0000033
RGD
GO_Central
PMID:20616046 GO_REF:0000033 NCBI chr15:28,019,775...28,031,537
Ensembl chr15:28,019,778...28,030,021
JBrowse link
G Apobec3 apolipoprotein B mRNA editing enzyme catalytic subunit 3 located_in
is_active_in
ISO
IBA
IEA
(PMID:22915799)
GO_REF:0000033
GO_REF:0000118
RGD
GO_Central
TreeGrafter
PMID:22915799 GO_REF:0000033 GO_REF:0000118 NCBI chr 7:111,433,789...111,453,032
Ensembl chr 7:111,433,764...111,452,922
JBrowse link
G Btbd1 BTB domain containing 1 located_in
is_active_in
ISO
IBA
(PMID:12878161)
GO_REF:0000033
(MGI:5306319|PMID:12878161)
RGD
GO_Central
PMID:12878161 GO_REF:0000033 MGI:5306319 NCBI chr 1:135,734,549...135,773,067
Ensembl chr 1:135,734,589...135,771,981
JBrowse link
G Btbd2 BTB domain containing 2 located_in
is_active_in
ISO
IBA
(PMID:12878161)
GO_REF:0000033
(MGI:5306319|PMID:12878161)
RGD
GO_Central
PMID:12878161 GO_REF:0000033 MGI:5306319 NCBI chr 7:9,058,609...9,075,341
Ensembl chr 7:9,060,788...9,075,344
JBrowse link
G Caprin1 cell cycle associated protein 1 located_in IDA PMID:20516077 UniProt PMID:20516077 RGD:8554681 NCBI chr 3:90,152,305...90,230,447
Ensembl chr 3:90,153,620...90,230,502
JBrowse link
G Carhsp1 calcium regulated heat stable protein 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:6,946,036...6,960,556
Ensembl chr10:6,946,959...7,020,019
JBrowse link
G Cnot1 CCR4-NOT transcription complex, subunit 1 located_in
is_active_in
ISO
IBA
(PMID:21976065)
GO_REF:0000033
(MGI:4431145|PMID:20133598)
RGD
GO_Central
PMID:20133598 PMID:21976065 GO_REF:0000033 MGI:4431145 NCBI chr19:9,255,190...9,346,574
Ensembl chr19:9,255,194...9,346,574
JBrowse link
G Cnot2 CCR4-NOT transcription complex, subunit 2 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:52,130,445...52,222,338
Ensembl chr 7:52,130,441...52,223,575
JBrowse link
G Cnot3 CCR4-NOT transcription complex, subunit 3 located_in
is_active_in
ISO
IBA
(MGI:4431145|PMID:20133598)
GO_REF:0000033
RGD
GO_Central
PMID:20133598 GO_REF:0000033 MGI:4431145 NCBI chr 1:65,555,924...65,572,167
Ensembl chr 1:65,555,924...65,572,167
JBrowse link
G Cnot7 CCR4-NOT transcription complex, subunit 7 located_in
is_active_in
ISO
IBA
(MGI:3807625|PMID:18625844), (MGI:4431145|PMID:20133598)
GO_REF:0000033
RGD
GO_Central
PMID:18625844 PMID:20133598 GO_REF:0000033 MGI:3807625 MGI:4431145 NCBI chr16:51,775,416...51,794,581
Ensembl chr16:51,775,412...51,794,576
JBrowse link
G Cnot8 CCR4-NOT transcription complex, subunit 8 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:42,281,614...42,294,740
Ensembl chr10:42,281,722...42,294,730
JBrowse link
G Cnot9 CCR4-NOT transcription complex subunit 9 located_in
is_active_in
ISS
IBA
IEA
ISO
GO_REF:0000024
GO_REF:0000033
GO_REF:0000044
(MGI:4431145|PMID:20133598)
UniProt
GO_Central
RGD
PMID:20133598 GO_REF:0000024 GO_REF:0000033 GO_REF:0000044 MGI:4431145 NCBI chr 9:76,084,269...76,109,111
Ensembl chr 9:76,084,334...76,109,100
JBrowse link
G Cpeb1 cytoplasmic polyadenylation element binding protein 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:135,300,048...135,407,688
Ensembl chr 1:135,300,461...135,409,760
JBrowse link
G Csde1 cold shock domain containing E1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 2:190,546,015...190,582,787
Ensembl chr 2:190,554,980...190,582,784
JBrowse link
G Dcp1a decapping mRNA 1A located_in
is_active_in
ISO
IBA
(MGI:3807625|PMID:18625844), (MGI:4820495|PMID:19861488), (MGI:5432265|PMID:22745163), (MGI:6706030|PMID:33813271)
GO_REF:0000033
RGD
GO_Central
PMID:18625844 PMID:19861488 PMID:22745163 PMID:33813271 GO_REF:0000033 MGI:3807625 MGI:4820495 MGI:5432265 MGI:6706030 NCBI chr16:5,656,960...5,702,151
Ensembl chr16:5,656,773...5,702,140
JBrowse link
G Dcp1b decapping mRNA 1B located_in
is_active_in
ISO
IBA
(MGI:5516374|PMID:24101522)
GO_REF:0000033
RGD
GO_Central
PMID:24101522 GO_REF:0000033 MGI:5516374 NCBI chr 4:152,358,267...152,395,747
Ensembl chr 4:152,358,241...152,397,145
JBrowse link
G Dcp2 decapping mRNA 2 located_in
is_active_in
ISO
IBA
(PMID:20616046)
GO_REF:0000033
RGD
GO_Central
PMID:20616046 GO_REF:0000033 NCBI chr18:36,750,732...36,787,067
Ensembl chr18:36,750,732...36,788,557
JBrowse link
G Dcps decapping enzyme, scavenger located_in
is_active_in
IEA
IBA
GO_REF:0000118
GO_REF:0000033
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr 8:33,468,669...33,524,407
Ensembl chr 8:33,415,671...33,524,389
JBrowse link
G Ddx6 DEAD-box helicase 6 located_in
is_active_in
part_of
ISO
IBA
(MGI:5614138|PMID:25456498)
GO_REF:0000033
(PMID:16699599), (PMID:20616046), (PMID:20826699), (PMID:22915799), (PMID:23125361), (PMID:25995375), (PMID:31422817)
(PMID:22022269)
RGD
GO_Central
PMID:16699599 PMID:20616046 PMID:20826699 PMID:22022269 PMID:22915799 More... GO_REF:0000033 MGI:5614138 NCBI chr 8:44,931,127...44,967,773
Ensembl chr 8:44,931,974...44,964,405
JBrowse link
G Dis3l2 DIS3-like 3'-5' exoribonuclease 2 located_in
is_active_in
ISO
IBA
(PMID:23756462)
GO_REF:0000033
RGD
GO_Central
PMID:23756462 GO_REF:0000033 NCBI chr 9:87,355,409...87,736,616
Ensembl chr 9:87,356,457...87,736,616
JBrowse link
G Edc3 enhancer of mRNA decapping 3 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:58,106,147...58,151,685
Ensembl chr 8:58,106,175...58,151,671
JBrowse link
G Edc4 enhancer of mRNA decapping 4 located_in
is_active_in
ISO
IBA
IEA
(PMID:20826699)
GO_REF:0000033
GO_REF:0000044
RGD
GO_Central
UniProt
PMID:20826699 GO_REF:0000033 GO_REF:0000044 NCBI chr19:33,774,062...33,786,054
Ensembl chr19:33,774,055...33,787,758
JBrowse link
G Eif4e eukaryotic translation initiation factor 4E located_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:16157702), (PMID:20616046), (PMID:24335285)
UniProt
Ensembl
RGD
PMID:16157702 PMID:20616046 PMID:24335285 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:227,066,519...227,099,261
Ensembl chr 2:227,066,673...227,098,683
JBrowse link
G Eif4e2 eukaryotic translation initiation factor 4E family member 2 located_in ISO (PMID:23991149) RGD PMID:23991149 NCBI chr 9:87,886,126...87,914,470
Ensembl chr 9:87,878,085...87,914,482
JBrowse link
G Eif4enif1 eukaryotic translation initiation factor 4E nuclear import factor 1 located_in ISO (PMID:16157702), (PMID:22966201), (PMID:23991149), (PMID:24335285), (PMID:32354837)
(MGI:5614138|PMID:25456498)
RGD PMID:16157702 PMID:22966201 PMID:23991149 PMID:24335285 PMID:25456498 More... MGI:5614138 NCBI chr14:78,056,115...78,099,846
Ensembl chr14:78,056,297...78,098,793
JBrowse link
G Elavl1 ELAV like RNA binding protein 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr12:2,640,936...2,684,787
Ensembl chr12:2,645,061...2,684,784
JBrowse link
G ENSRNOG00000066881 located_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr13:2,852,897...2,854,568 JBrowse link
G ENSRNOG00000068058 located_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr16:17,898,135...17,898,773 JBrowse link
G Fam184a family with sequence similarity 184, member A located_in ISO (PMID:33957083) RGD PMID:33957083 NCBI chr20:32,934,424...33,056,626
Ensembl chr20:32,934,636...33,056,652
JBrowse link
G Garre1 granule associated Rac and RHOG effector 1 located_in ISO (PMID:29395067) RGD PMID:29395067 NCBI chr 1:86,862,121...86,939,725
Ensembl chr 1:86,862,121...86,939,687
JBrowse link
G Hax1 HCLS1 associated protein X-1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 2:175,434,242...175,437,926
Ensembl chr 2:175,434,238...175,437,714
JBrowse link
G Igf2bp1 insulin-like growth factor 2 mRNA binding protein 1 located_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000044
(PMID:29476152)
UniProt
RGD
PMID:29476152 GO_REF:0000024 GO_REF:0000044 NCBI chr10:80,908,300...80,951,097
Ensembl chr10:80,908,076...80,951,129
JBrowse link
G Igf2bp2 insulin-like growth factor 2 mRNA binding protein 2 located_in ISO (PMID:29476152) RGD PMID:29476152 NCBI chr11:78,874,402...78,974,392
Ensembl chr11:78,874,414...78,974,377
JBrowse link
G Igf2bp3 insulin-like growth factor 2 mRNA binding protein 3 located_in ISO (PMID:29476152) RGD PMID:29476152 NCBI chr 4:78,060,494...78,195,007
Ensembl chr 4:78,060,494...78,194,865
JBrowse link
G Kif5a kinesin family member 5A IDA RGD PMID:23487039 RGD:12791272 NCBI chr 7:63,051,894...63,089,024
Ensembl chr 7:63,049,424...63,092,858
JBrowse link
G Limd1 LIM domain containing 1 located_in
is_active_in
ISO
IBA
IEA
(PMID:20616046)
GO_REF:0000033
GO_REF:0000118
RGD
GO_Central
TreeGrafter
PMID:20616046 GO_REF:0000033 GO_REF:0000118 NCBI chr 8:123,121,363...123,168,476
Ensembl chr 8:123,122,460...123,167,714
JBrowse link
G Lin28a lin-28 homolog A located_in ISO (PMID:17617744) RGD PMID:17617744 NCBI chr 5:146,227,119...146,244,122
Ensembl chr 5:146,227,119...146,244,122
JBrowse link
G LOC100364335 cold shock domain-containing protein E1-like located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr13:78,477,560...78,481,251 JBrowse link
G Lsm1 LSM1 homolog, mRNA degradation associated located_in
is_active_in
ISO
IBA
(MGI:5614138|PMID:25456498)
GO_REF:0000033
RGD
GO_Central
PMID:25456498 GO_REF:0000033 MGI:5614138 NCBI chr16:66,277,345...66,288,852
Ensembl chr16:66,277,345...66,288,852
JBrowse link
G Lsm14a LSM14A mRNA processing body assembly factor located_in
is_active_in
ISO
IBA
(PMID:16484376), (PMID:17074753)
GO_REF:0000033
(MGI:5432265|PMID:22745163)
RGD
GO_Central
PMID:16484376 PMID:17074753 PMID:22745163 GO_REF:0000033 MGI:5432265 NCBI chr 1:86,964,800...87,009,325
Ensembl chr 1:86,964,828...87,009,276
JBrowse link
G Lsm2 LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:3,843,467...3,847,217
Ensembl chr20:3,843,466...3,847,266
JBrowse link
G Lsm3 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:124,021,023...124,027,269
Ensembl chr 4:124,021,023...124,027,269
JBrowse link
G Lsm4 LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:18,755,481...18,761,106
Ensembl chr16:18,755,484...18,760,926
JBrowse link
G Lsm6 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:29,098,254...29,112,858
Ensembl chr13:42,114,032...42,116,484
Ensembl chr19:42,114,032...42,116,484
JBrowse link
G Lsm6l1 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated like 1 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:42,114,013...42,116,559
Ensembl chr13:42,114,032...42,116,484
JBrowse link
G Mex3a mex-3 RNA binding family member A located_in ISO (PMID:23408853) RGD PMID:23408853 NCBI chr 2:173,990,098...173,999,567
Ensembl chr 2:173,989,856...173,997,377
JBrowse link
G Mex3b mex-3 RNA binding family member B located_in ISO (PMID:23408853) RGD PMID:23408853 NCBI chr 1:136,855,130...136,859,365
Ensembl chr 1:136,855,130...136,859,354
JBrowse link
G Mir23a microRNA 23a located_in ISO (MGI:5516374|PMID:24101522) RGD PMID:24101522 MGI:5516374 NCBI chr19:23,954,997...23,955,071
Ensembl chr19:23,954,997...23,955,071
JBrowse link
G Mov10 Mov10 RNA helicase located_in ISO (PMID:16289642), (PMID:24726324), (PMID:27974568) RGD PMID:16289642 PMID:24726324 PMID:27974568 NCBI chr 2:192,292,041...192,315,142
Ensembl chr 2:192,293,470...192,315,083
JBrowse link
G Nanos2 nanos C2HC-type zinc finger 2 located_in ISO (MGI:4431145|PMID:20133598) RGD PMID:20133598 MGI:4431145 NCBI chr 1:78,635,668...78,637,128
Ensembl chr 1:78,635,668...78,637,128
JBrowse link
G Nanos3 nanos C2HC-type zinc finger 3 located_in ISO (MGI:4820495|PMID:19861488) RGD PMID:19861488 MGI:4820495 NCBI chr19:23,978,465...23,988,933
Ensembl chr19:23,985,504...23,988,932
JBrowse link
G Nbdy negative regulator of P-body association located_in ISO (PMID:27918561) RGD PMID:27918561
G Noct nocturnin located_in ISO (MGI:3807625|PMID:18625844) RGD PMID:18625844 MGI:3807625 NCBI chr 2:135,271,189...135,291,407
Ensembl chr 2:135,271,189...135,291,400
JBrowse link
G Pan2 poly(A) specific ribonuclease subunit PAN2 located_in
is_active_in
IEA
IBA
ISO
GO_REF:0000044
GO_REF:0000033
(MGI:3807625|PMID:18625844)
UniProt
GO_Central
RGD
PMID:18625844 GO_REF:0000033 GO_REF:0000044 MGI:3807625 NCBI chr 7:729,146...747,744
Ensembl chr 7:729,562...747,744
JBrowse link
G Pan3 poly(A) specific ribonuclease subunit PAN3 located_in
is_active_in
ISO
IBA
(MGI:3807625|PMID:18625844)
GO_REF:0000033
RGD
GO_Central
PMID:18625844 GO_REF:0000033 MGI:3807625 NCBI chr12:7,476,707...7,595,384
Ensembl chr12:7,476,697...7,599,204
JBrowse link
G Patl1 PAT1 homolog 1, processing body mRNA decay factor located_in
is_active_in
ISS
IBA
IEA
ISO
GO_REF:0000024
GO_REF:0000033
GO_REF:0000044
(PMID:20543818), (PMID:20584987), (PMID:20826699), (PMID:20852261)
UniProt
GO_Central
RGD
PMID:20543818 PMID:20584987 PMID:20826699 PMID:20852261 GO_REF:0000024 GO_REF:0000033 GO_REF:0000044 NCBI chr 1:208,831,115...208,862,904
Ensembl chr 1:208,831,115...208,862,857
JBrowse link
G Patl2 PAT1 homolog 2 located_in
is_active_in
ISO
IBA
(MGI:4889175|PMID:20826699)
GO_REF:0000033
RGD
GO_Central
PMID:20826699 GO_REF:0000033 MGI:4889175 NCBI chr 3:109,072,958...109,087,425
Ensembl chr 3:109,075,290...109,083,253
JBrowse link
G Pnrc1 proline-rich nuclear receptor coactivator 1 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:47,647,070...47,657,832
Ensembl chr 5:47,647,071...47,650,161
JBrowse link
G Pnrc2 proline-rich nuclear receptor coactivator 2 located_in
is_active_in
ISS
IBA
ISO
GO_REF:0000024
GO_REF:0000033
(PMID:19150429)
UniProt
GO_Central
RGD
PMID:19150429 GO_REF:0000024 GO_REF:0000033 NCBI chr 5:148,103,966...148,106,950
Ensembl chr 5:148,095,699...148,107,242
Ensembl chr 5:148,095,699...148,107,242
JBrowse link
G Polr2g RNA polymerase II subunit G located_in
is_active_in
IEA
IBA
GO_REF:0000118
GO_REF:0000033
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr 1:205,689,160...205,692,537
Ensembl chr 1:205,689,160...205,692,686
JBrowse link
G Psma2 proteasome 20S subunit alpha 2 located_in ISS
ISO
GO_REF:0000024
(MGI:5487513|PMID:22078707)
UniProt
RGD
PMID:22078707 GO_REF:0000024 MGI:5487513 NCBI chr17:50,554,536...50,564,923
Ensembl chr17:50,551,924...50,564,938
JBrowse link
G Psma4 proteasome 20S subunit alpha 4 located_in ISS
ISO
GO_REF:0000024
(MGI:5487513|PMID:22078707)
UniProt
RGD
PMID:22078707 GO_REF:0000024 MGI:5487513 NCBI chr 8:55,340,431...55,347,893
Ensembl chr 8:55,340,386...55,347,890
JBrowse link
G Psma6 proteasome 20S subunit alpha 6 located_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:5487513|PMID:22078707)
UniProt
Ensembl
RGD
PMID:22078707 GO_REF:0000024 GO_REF:0000107 MGI:5487513 NCBI chr 6:72,765,534...72,796,554
Ensembl chr 6:72,765,473...72,796,554
JBrowse link
G Psmc2 proteasome 26S subunit, ATPase 2 located_in ISS
ISO
GO_REF:0000024
(MGI:5487513|PMID:22078707)
UniProt
RGD
PMID:22078707 GO_REF:0000024 MGI:5487513 NCBI chr 4:13,255,850...13,270,160
Ensembl chr 4:13,255,856...13,270,185
JBrowse link
G Psmc3 proteasome 26S subunit, ATPase 3 located_in ISO
ISS
(MGI:5487513|PMID:22078707)
GO_REF:0000024
RGD
UniProt
PMID:22078707 GO_REF:0000024 MGI:5487513 NCBI chr 3:77,031,825...77,037,207
Ensembl chr 3:77,031,825...77,043,358
JBrowse link
G Pum1 pumilio RNA-binding family member 1 located_in ISO (PMID:20818387) RGD PMID:20818387 NCBI chr 5:142,836,933...142,954,331
Ensembl chr 5:142,837,127...142,954,039
JBrowse link
G Rbpms RNA binding protein, mRNA processing factor located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr16:58,239,370...58,395,424
Ensembl chr16:58,239,474...58,395,426
JBrowse link
G Rc3h1 ring finger and CCCH-type domains 1 located_in ISO (MGI:4819285|PMID:20639877), (MGI:5706859|PMID:26000482), (MGI:5751631|PMID:26255671)
(PMID:31636267)
RGD PMID:20639877 PMID:26000482 PMID:26255671 PMID:31636267 MGI:4819285 MGI:5706859 MGI:5751631 NCBI chr13:73,174,075...73,245,762
Ensembl chr13:73,173,946...73,238,839
JBrowse link
G Rc3h2 ring finger and CCCH-type domains 2 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 3:21,121,531...21,186,711
Ensembl chr 3:21,110,679...21,179,933
JBrowse link
G RGD1359108 similar to RIKEN cDNA 3110043O21 located_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:27037575)
UniProt
Ensembl
RGD
PMID:27037575 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:49,766,340...49,791,434
Ensembl chr 5:49,766,325...49,791,408
JBrowse link
G Samd4a sterile alpha motif domain containing 4A located_in
is_active_in
IEA
IBA
GO_REF:0000118
GO_REF:0000033
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr15:20,135,994...20,352,131
Ensembl chr15:20,134,377...20,348,380
JBrowse link
G Samd4b sterile alpha motif domain containing 4B is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:83,689,413...83,728,652
Ensembl chr 1:83,689,413...83,713,853
JBrowse link
G Shfl shiftless antiviral inhibitor of ribosomal frameshifting located_in ISO
IEA
ISS
(PMID:27974568)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:27974568 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:19,408,298...19,414,084
Ensembl chr 8:19,408,333...19,413,971
JBrowse link
G Sqstm1 sequestosome 1 located_in ISS
ISO
GO_REF:0000024
(PMID:20357094)
UniProt
RGD
PMID:20357094 GO_REF:0000024 NCBI chr10:34,525,517...34,536,670
Ensembl chr10:34,525,519...34,536,673
JBrowse link
G St3gal4 ST3 beta-galactoside alpha-2,3-sialyltransferase 4 located_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 8:33,415,666...33,465,319
Ensembl chr 8:33,415,671...33,524,389
JBrowse link
G Syne1 spectrin repeat containing nuclear envelope protein 1 located_in ISO (PMID:24862572) RGD PMID:24862572 NCBI chr 1:41,512,146...41,983,382
Ensembl chr 1:41,512,030...41,983,322
JBrowse link
G Tnrc6a trinucleotide repeat containing adaptor 6A located_in
is_active_in
ISO
IBA
(PMID:20616046)
GO_REF:0000033
RGD
GO_Central
PMID:20616046 GO_REF:0000033 NCBI chr 1:177,561,898...177,715,669
Ensembl chr 1:177,646,030...177,715,660
JBrowse link
G Tnrc6b trinucleotide repeat containing adaptor 6B is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:112,252,351...112,469,829
Ensembl chr 7:112,252,359...112,461,790
JBrowse link
G Tnrc6c trinucleotide repeat containing adaptor 6C is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:102,908,958...102,979,543
Ensembl chr10:102,868,828...102,978,194
JBrowse link
G Top1 DNA topoisomerase I located_in ISO
IEA
(PMID:12878161)
GO_REF:0000107
RGD
Ensembl
PMID:12878161 GO_REF:0000107 NCBI chr 3:149,293,469...149,376,618
Ensembl chr 3:149,293,403...149,376,623
JBrowse link
G Trim5 tripartite motif-containing 5 located_in ISO (PMID:20357094)
(PMID:12878161)
RGD PMID:12878161 PMID:20357094 NCBI chr 1:158,720,407...158,737,393
Ensembl chr 1:158,720,410...158,814,012
JBrowse link
G Trim71 tripartite motif containing 71 located_in ISS
ISO
GO_REF:0000024
(MGI:4438512|PMID:19898466), (MGI:5319563|PMID:22508726), (MGI:5448492|PMID:22735451)
(PMID:23125361)
UniProt
RGD
PMID:19898466 PMID:22508726 PMID:22735451 PMID:23125361 GO_REF:0000024 MGI:4438512 MGI:5319563 MGI:5448492 NCBI chr 8:114,193,439...114,250,807
Ensembl chr 8:114,199,187...114,250,807
JBrowse link
G Wtip WT1 interacting protein located_in
is_active_in
ISO
IBA
(PMID:20616046)
GO_REF:0000033
RGD
GO_Central
PMID:20616046 GO_REF:0000033 NCBI chr 1:86,731,214...86,764,939
Ensembl chr 1:86,731,265...86,765,014
JBrowse link
G Xrn1 5'-3' exoribonuclease 1 located_in IDA
ISO
(MGI:3807625|PMID:18625844) RGD PMID:18625844 PMID:22590546 MGI:3807625, RGD:12791034 NCBI chr 8:96,527,871...96,637,385
Ensembl chr 8:96,528,195...96,632,739
JBrowse link
G Ybx1 Y box binding protein 1 located_in ISO
IEA
(MGI:7510300|PMID:20713358)
GO_REF:0000107
RGD
Ensembl
PMID:20713358 GO_REF:0000107 MGI:7510300 NCBI chr 5:132,882,137...132,898,885
Ensembl chr 5:132,882,145...132,898,862
JBrowse link
G Ythdf1 YTH N6-methyladenosine RNA binding protein F1 located_in ISO (PMID:32492408) RGD PMID:32492408 NCBI chr 3:168,024,660...168,040,172
Ensembl chr 3:168,024,663...168,040,172
JBrowse link
G Ythdf2 YTH N6-methyladenosine RNA binding protein F2 located_in ISO (PMID:24284625), (PMID:31292544), (PMID:32492408) RGD PMID:24284625 PMID:31292544 PMID:32492408 NCBI chr 5:144,381,426...144,407,126
Ensembl chr 5:144,381,431...144,408,144
JBrowse link
G Ythdf3 YTH N6-methyladenosine RNA binding protein F3 located_in ISO (PMID:32492408) RGD PMID:32492408 NCBI chr 2:98,350,304...98,384,608
Ensembl chr 2:98,350,588...98,384,606
JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A located_in ISO
ISS
(PMID:22055188), (PMID:26134560)
GO_REF:0000024
RGD
UniProt
PMID:22055188 PMID:26134560 GO_REF:0000024 NCBI chr 5:137,376,562...137,385,351
Ensembl chr 5:137,376,564...137,385,351
JBrowse link
G Zc3h12d zinc finger CCCH type containing 12D located_in ISO (PMID:24415781), (PMID:26134560) RGD PMID:24415781 PMID:26134560 NCBI chr 1:2,313,110...2,348,820
Ensembl chr 1:2,314,324...2,348,819
JBrowse link
G Zfp36 zinc finger protein 36 located_in ISO
ISS
(PMID:17369404), (PMID:21964062)
GO_REF:0000024
RGD
UniProt
PMID:17369404 PMID:21964062 GO_REF:0000024 NCBI chr 1:83,669,084...83,671,564
Ensembl chr 1:83,669,084...83,671,564
JBrowse link
G Zfp36l1 zinc finger protein 36, C3H type-like 1 located_in ISS
ISO
GO_REF:0000024
(PMID:17369404)
UniProt
RGD
PMID:17369404 GO_REF:0000024 NCBI chr 6:98,930,705...98,935,748
Ensembl chr 6:98,930,718...98,935,748
JBrowse link
pi-body term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ago2 argonaute RISC catalytic component 2 IDA MMO:0000663 RGD PMID:27029769 RGD:11529670 NCBI chr 7:105,018,202...105,105,118
Ensembl chr 7:105,029,120...105,104,974
JBrowse link
G Ankrd34c ankyrin repeat domain 34C is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:90,271,264...90,281,759
Ensembl chr 8:90,269,315...90,281,775
JBrowse link
G Asz1 ankyrin repeat, SAM and basic leucine zipper domain containing 1 located_in
is_active_in
ISO
IBA
(MGI:4356194|PMID:19730684)
GO_REF:0000033
RGD
GO_Central
PMID:19730684 GO_REF:0000033 MGI:4356194 NCBI chr 4:46,400,485...46,456,085
Ensembl chr 4:46,400,485...46,456,085
JBrowse link
G Ddx4 DEAD-box helicase 4 located_in ISS
ISO
GO_REF:0000024
(MGI:4417983|PMID:20011505), (MGI:4443217|PMID:20439430), (MGI:5446593|PMID:22792342)
UniProt
RGD
PMID:20011505 PMID:20439430 PMID:22792342 GO_REF:0000024 MGI:4417983 MGI:4443217 MGI:5446593 NCBI chr 2:44,227,946...44,282,867
Ensembl chr 2:44,227,946...44,282,723
JBrowse link
G Mov10l1 Mov10 like RNA helicase 1 located_in ISO (MGI:5470328|PMID:23166510) RGD PMID:23166510 MGI:5470328 NCBI chr 7:120,070,171...120,135,406
Ensembl chr 7:120,070,135...120,134,765
JBrowse link
G Piwil2 piwi-like RNA-mediated gene silencing 2 located_in ISO (MGI:4356194|PMID:19730684), (MGI:4417983|PMID:20011505), (MGI:4418580|PMID:20059948) RGD PMID:19730684 PMID:20011505 PMID:20059948 MGI:4356194 MGI:4417983 MGI:4418580 NCBI chr15:45,431,402...45,498,034
Ensembl chr15:45,431,703...45,497,702
JBrowse link
G Tdrd1 tudor domain containing 1 located_in ISO (MGI:4417983|PMID:20011505), (MGI:4418580|PMID:20059948), (MGI:4820495|PMID:19861488) RGD PMID:19861488 PMID:20011505 PMID:20059948 MGI:4417983 MGI:4418580 MGI:4820495 NCBI chr 1:255,871,939...255,919,222
Ensembl chr 1:255,875,887...255,915,871
JBrowse link
G Tdrd5 tudor domain containing 5 located_in ISS
ISO
IEA
GO_REF:0000024
(MGI:4946318|PMID:21383078)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:21383078 GO_REF:0000024 GO_REF:0000107 MGI:4946318 NCBI chr13:68,394,180...68,447,745
Ensembl chr13:68,394,061...68,441,319
JBrowse link
G Tdrkh tudor and KH domain containing located_in ISO (MGI:5494327|PMID:23714778) RGD PMID:23714778 MGI:5494327 NCBI chr 2:182,049,175...182,071,516
Ensembl chr 2:182,049,215...182,070,755
JBrowse link
piP-body term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddx4 DEAD-box helicase 4 located_in ISS
ISO
GO_REF:0000024
(MGI:4417983|PMID:20011505)
UniProt
RGD
PMID:20011505 GO_REF:0000024 MGI:4417983 NCBI chr 2:44,227,946...44,282,867
Ensembl chr 2:44,227,946...44,282,723
JBrowse link
G Mael maelstrom spermatogenic transposon silencer located_in ISO (MGI:4417983|PMID:20011505) RGD PMID:20011505 MGI:4417983 NCBI chr13:78,457,073...78,496,657
Ensembl chr13:78,457,073...78,496,657
JBrowse link
G Piwil4 piwi-like RNA-mediated gene silencing 4 located_in ISS
ISO
GO_REF:0000024
(MGI:4417983|PMID:20011505), (MGI:4418580|PMID:20059948)
UniProt
RGD
PMID:20011505 PMID:20059948 GO_REF:0000024 MGI:4417983 MGI:4418580 NCBI chr 8:11,536,520...11,579,883
Ensembl chr 8:11,536,520...11,579,761
JBrowse link
G Tdrd9 tudor domain containing 9 located_in ISS
ISO
GO_REF:0000024
(MGI:4417983|PMID:20011505), (MGI:4418580|PMID:20059948)
UniProt
RGD
PMID:20011505 PMID:20059948 GO_REF:0000024 MGI:4417983 MGI:4418580 NCBI chr 6:131,029,644...131,145,076
Ensembl chr 6:131,029,652...131,144,651
JBrowse link
G Tdrkh tudor and KH domain containing located_in ISO (MGI:5494327|PMID:23714778) RGD PMID:23714778 MGI:5494327 NCBI chr 2:182,049,175...182,071,516
Ensembl chr 2:182,049,215...182,070,755
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 21257
    cellular anatomical entity 21099
      supramolecular complex 1429
        ribonucleoprotein granule 280
          cytoplasmic ribonucleoprotein granule + 261
          nuclear stress granule 6
Path 2
Term Annotations click to browse term
  cellular_component 21257
    cellular anatomical entity 21099
      organelle 14212
        non-membrane-bounded organelle 5315
          intracellular non-membrane-bounded organelle 5313
            ribonucleoprotein granule 280
              cytoplasmic ribonucleoprotein granule + 261
              nuclear stress granule 6
paths to the root