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ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of SNARE complex assembly
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Accession:GO:0035542 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of assembly of the SNARE complex. The SNARE complex is a protein complex involved in membrane fusion; a stable ternary complex consisting of a four-helix bundle, usually formed from one R-SNARE and three Q-SNAREs with an ionic layer sandwiched between hydrophobic layers.


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regulation of SNARE complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SEPTIN8 septin 8 involved_in ISS UniProt GO_REF:0000024 NCBI chr 5:132,750,819...132,780,083
Ensembl chr 5:132,750,819...132,807,241 		JBrowse link
G STXBP1 syntaxin binding protein 1 involved_in TAS (PMID:15217342) ParkinsonsUK-UCL PMID:15217342 NCBI chr 9:127,611,912...127,696,029
Ensembl chr 9:127,579,370...127,696,027 		JBrowse link
G STXBP6 syntaxin binding protein 6 involved_in IEA InterPro GO_REF:0000002 NCBI chr14:24,809,454...25,050,147
Ensembl chr14:24,809,454...25,050,147 		JBrowse link
G TGFBRAP1 transforming growth factor beta receptor associated protein 1 involved_in NAS (PMID:31092635) ComplexPortal PMID:31092635 NCBI chr 2:105,249,404...105,329,735
Ensembl chr 2:105,264,391...105,329,735 		JBrowse link
G VPS11 VPS11 core subunit of CORVET and HOPS complexes involved_in NAS (PMID:24554770), (PMID:31092635) ComplexPortal PMID:24554770 PMID:31092635 NCBI chr11:119,067,818...119,081,972
Ensembl chr11:119,067,818...119,081,972 		JBrowse link
G VPS16 VPS16 core subunit of CORVET and HOPS complexes involved_in NAS (PMID:24554770), (PMID:31092635) ComplexPortal PMID:24554770 PMID:31092635 NCBI chr20:2,840,745...2,866,732
Ensembl chr20:2,840,703...2,866,732 		JBrowse link
G VPS18 VPS18 core subunit of CORVET and HOPS complexes involved_in NAS (PMID:24554770), (PMID:31092635) ComplexPortal PMID:24554770 PMID:31092635 NCBI chr15:40,894,450...40,903,975
Ensembl chr15:40,894,450...40,903,975 		JBrowse link
G VPS33A VPS33A core subunit of CORVET and HOPS complexes involved_in NAS (PMID:24554770), (PMID:31092635) ComplexPortal PMID:24554770 PMID:31092635 NCBI chr12:122,229,564...122,266,494
Ensembl chr12:122,229,564...122,266,494 		JBrowse link
G VPS39 VPS39 subunit of HOPS complex involved_in NAS (PMID:24554770) ComplexPortal PMID:24554770 NCBI chr15:42,158,701...42,208,304
Ensembl chr15:42,158,701...42,208,307 		JBrowse link
G VPS41 VPS41 subunit of HOPS complex involved_in NAS (PMID:24554770) ComplexPortal PMID:24554770 NCBI chr 7:38,722,974...38,909,191
Ensembl chr 7:38,722,974...38,932,394 		JBrowse link
G VPS8 VPS8 subunit of CORVET complex involved_in NAS (PMID:31092635) ComplexPortal PMID:31092635 NCBI chr 3:184,812,166...185,052,614
Ensembl chr 3:184,812,143...185,052,614 		JBrowse link
negative regulation of SNARE complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANKRD27 ankyrin repeat domain 27 involved_in IDA (PMID:24856514) UniProt PMID:24856514 NCBI chr19:32,597,006...32,675,180
Ensembl chr19:32,597,006...32,676,597 		JBrowse link
G PRRT2 proline rich transmembrane protein 2 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr16:29,812,193...29,815,881
Ensembl chr16:29,811,382...29,815,892 		JBrowse link
G TRIM9 tripartite motif containing 9 ISO RGD PMID:11524423 RGD:631246 NCBI chr14:50,975,266...51,095,105
Ensembl chr14:50,975,262...51,096,061 		JBrowse link
positive regulation of SNARE complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SNCA synuclein alpha involved_in IDA (PMID:20798282) CACAO PMID:20798282 NCBI chr 4:89,724,099...89,838,304
Ensembl chr 4:89,700,345...89,838,315 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19770
    cellular process 18460
      regulation of cellular process 12502
        regulation of cellular component organization 2903
          regulation of protein-containing complex assembly 492
            regulation of SNARE complex assembly 15
              negative regulation of SNARE complex assembly 3
              positive regulation of SNARE complex assembly 1
Path 2
Term Annotations click to browse term
  biological_process 19770
    cellular process 18460
      cellular component organization or biogenesis 7619
        cellular component organization 7393
          organelle organization 4029
            organelle fusion 194
              organelle membrane fusion 149
                vesicle fusion 147
                  SNARE complex assembly 27
                    regulation of SNARE complex assembly 15
                      negative regulation of SNARE complex assembly 3
                      positive regulation of SNARE complex assembly 1
paths to the root