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ONTOLOGY REPORT - ANNOTATIONS


Term:vitamin transmembrane transport
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Accession:GO:0035461 term browser browse the term
Definition:The process in which a vitamin is transported across a membrane. A vitamin is one of a number of unrelated organic substances that occur in many foods in small amounts and that are necessary in trace amounts for the normal metabolic functioning of the body.
Comment:Note that this term is not intended for use in annotating lateral movement within membranes.
Synonyms:exact_synonym: vitamin membrane transport


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vitamin transmembrane transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gc GC, vitamin D binding protein involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr14:18,632,146...18,667,563
Ensembl chr14:18,632,135...18,667,567
JBrowse link
G Scarb1 scavenger receptor class B, member 1 involved_in ISO (PMID:11208913) RGD PMID:11208913 NCBI chr12:31,296,143...31,362,649
Ensembl chr12:31,296,156...31,362,647
JBrowse link
biotin import across plasma membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc27a1 solute carrier family 27 member 1 involved_in ISO
IEA
(PMID:28035674)
GO_REF:0000107
RGD
Ensembl
PMID:28035674 GO_REF:0000107 NCBI chr16:18,278,984...18,300,173
Ensembl chr16:18,278,984...18,296,063
JBrowse link
G Slc5a6 solute carrier family 5 member 6 involved_in ISS
ISO
GO_REF:0000024
(PMID:15561972), (PMID:21570947), (PMID:22015582), (PMID:25809983)
UniProt
RGD
PMID:15561972 PMID:21570947 PMID:22015582 PMID:25809983 GO_REF:0000024 NCBI chr 6:25,319,187...25,331,713
Ensembl chr 6:25,320,442...25,331,712
JBrowse link
folate import across plasma membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Folr1 folate receptor alpha involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:156,219,460...156,238,436
Ensembl chr 1:156,219,460...156,230,667
JBrowse link
G Folr2 folate receptor beta involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:156,200,044...156,218,380
Ensembl chr 1:156,200,060...156,205,724
JBrowse link
G Lrp2 LDL receptor related protein 2 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5603707|PMID:24639464)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:24639464 GO_REF:0000024 GO_REF:0000107 MGI:5603707 NCBI chr 3:54,189,305...54,346,769
Ensembl chr 3:54,189,308...54,346,708
JBrowse link
G Slc19a1 solute carrier family 19 member 1 involved_in ISO (PMID:14609557), (PMID:22554803)
(MGI:1303207|PMID:9748272), (MGI:87123|PMID:9111015)
RGD PMID:9111015 PMID:9748272 PMID:14609557 PMID:22554803 MGI:1303207 MGI:87123 NCBI chr20:11,584,410...11,602,429
Ensembl chr20:11,584,411...11,601,972
JBrowse link
G Slc46a1 solute carrier family 46 member 1 involved_in ISO (PMID:19762432) RGD PMID:19762432 NCBI chr10:63,361,504...63,367,940
Ensembl chr10:63,361,486...63,368,848
JBrowse link
folate import into mitochondrion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc25a32 solute carrier family 25 member 32 involved_in ISO UniProtKB:Q6IZB5 (PMID:15140890), (PMID:29666258)
(MGI:6155930|PMID:29666258)
RGD PMID:15140890 PMID:29666258 MGI:6155930 NCBI chr 7:70,142,958...70,160,726
Ensembl chr 7:70,142,964...70,160,770
JBrowse link
folate transmembrane transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc5 ATP binding cassette subfamily C member 5 involved_in IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:15899835)
Ensembl
UniProt
RGD
PMID:15899835 GO_REF:0000024 GO_REF:0000107 NCBI chr11:80,473,809...80,567,257
Ensembl chr11:80,473,872...80,567,253
JBrowse link
G Slc19a1 solute carrier family 19 member 1 involved_in IBA
ISO
PMID:21873635
(MGI:1303207|PMID:9748272), (MGI:87123|PMID:9111015)
(PMID:22554803)
RGD PMID:9111015 PMID:9748272 PMID:22554803 PMID:21873635 MGI:1303207 MGI:87123, RGD:13792537 NCBI chr20:11,584,410...11,602,429
Ensembl chr20:11,584,411...11,601,972
JBrowse link
L-ascorbic acid transmembrane transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc23a1 solute carrier family 23 member 1 involved_in ISO
IEA
IDA
(PMID:10631088), (PMID:11895172), (PMID:18247577), (PMID:18417304), (PMID:19216494)
GO_REF:0000107
(MGI:2178849|PMID:11984597), (MGI:3607055|PMID:15333707), (MGI:4365346|PMID:18668520)
RGD
Ensembl
PMID:10631088 PMID:11895172 PMID:11984597 PMID:15333707 PMID:18247577 More... GO_REF:0000107 MGI:2178849 MGI:3607055 MGI:4365346, RGD:8554811 NCBI chr18:27,214,940...27,230,564
Ensembl chr18:27,216,281...27,230,697
JBrowse link
G Slc23a2 solute carrier family 23 member 2 involved_in IMP
ISO
IDA
(MGI:3607055|PMID:15333707), (MGI:4365346|PMID:18668520)
(PMID:10471399), (PMID:10631088), (PMID:18247577), (PMID:18417304), (PMID:19216494)
RGD PMID:10471399 PMID:10631088 PMID:15333707 PMID:18247577 PMID:18417304 More... MGI:3607055 MGI:4365346, RGD:634186, RGD:8554811 NCBI chr 3:119,302,651...119,395,289
Ensembl chr 3:119,302,666...119,460,343
JBrowse link
pantothenate transmembrane transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc5a6 solute carrier family 5 member 6 involved_in IDA
ISO
IBA
(PMID:25809983)
PMID:21873635
RGD PMID:25809983 PMID:9516450 PMID:21873635 RGD:68917, RGD:13792537 NCBI chr 6:25,319,187...25,331,713
Ensembl chr 6:25,320,442...25,331,712
JBrowse link
thiamine pyrophosphate transmembrane transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07005723.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G RGD1561206 similar to solute carrier family 25 (mitochondrial deoxynucleotide carrier), member 19 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:111,433,195...111,435,231 JBrowse link
G Slc25a19 solute carrier family 25 member 19 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:100,853,554...100,867,517
Ensembl chr10:100,847,168...100,867,447
JBrowse link
G Slc44a4 solute carrier family 44, member 4 involved_in ISO
ISS
IBA
(PMID:24379411)
(MGI:5902675|PMID:24379411)
GO_REF:0000024
PMID:21873635
RGD
UniProt
PMID:24379411 PMID:21873635 GO_REF:0000024 MGI:5902675, RGD:13792537 NCBI chr20:3,903,099...3,919,215
Ensembl chr20:3,903,099...3,919,215
JBrowse link
thiamine transmembrane transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07005723.1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108
G RGD1561206 similar to solute carrier family 25 (mitochondrial deoxynucleotide carrier), member 19 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:111,433,195...111,435,231 JBrowse link
G Slc19a2 solute carrier family 19 member 2 involved_in ISO (MGI:4947928|PMID:19879271) RGD PMID:19879271 MGI:4947928 NCBI chr13:76,601,975...76,616,175
Ensembl chr13:76,601,900...76,616,172
JBrowse link
G Slc19a3 solute carrier family 19 member 3 involved_in ISO (MGI:4947928|PMID:19879271) RGD PMID:19879271 MGI:4947928 NCBI chr 9:84,275,722...84,299,368
Ensembl chr 9:84,277,024...84,299,337
JBrowse link
G Slc25a19 solute carrier family 25 member 19 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:100,853,554...100,867,517
Ensembl chr10:100,847,168...100,867,447
JBrowse link
vitamin A import term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rbp4 retinol binding protein 4 acts_upstream_of_or_within ISO MGI:2445721 (MGI:3687059|PMID:12484775) RGD PMID:12484775 MGI:3687059 NCBI chr 1:235,893,917...235,901,315
Ensembl chr 1:235,893,917...235,901,399
JBrowse link
G RGD1305807 hypothetical LOC298077 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:60,106,949...60,147,546
Ensembl chr 5:60,107,085...60,147,539
JBrowse link
G Stra6 signaling receptor and transporter of retinol STRA6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:58,549,743...58,568,861
Ensembl chr 8:58,549,736...58,568,860
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19492
    cellular process 18340
      transmembrane transport 1582
        vitamin transmembrane transport 22
          L-ascorbic acid transmembrane transport 2
          biotin import across plasma membrane 2
          folate transmembrane transport + 7
          pantothenate transmembrane transport + 1
          pyridoxal transmembrane transport + 0
          pyridoxamine transmembrane transport 0
          pyridoxine transmembrane transport + 0
          thiamine transmembrane transport + 6
          vitamin A import 3
Path 2
Term Annotations click to browse term
  biological_process 19492
    localization 6447
      establishment of localization 4864
        transport 4700
          vitamin transport 42
            vitamin transmembrane transport 22
              L-ascorbic acid transmembrane transport 2
              biotin import across plasma membrane 2
              folate transmembrane transport + 7
              pantothenate transmembrane transport + 1
              pyridoxal transmembrane transport + 0
              pyridoxamine transmembrane transport 0
              pyridoxine transmembrane transport + 0
              thiamine transmembrane transport + 6
              vitamin A import 3
paths to the root