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ONTOLOGY REPORT - ANNOTATIONS

Term:vesicle cargo loading
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Accession:GO:0035459 term browser browse the term
Definition:The formation of a macromolecular complex between the coat proteins and proteins and/or lipoproteins that are going to be transported by a vesicle.
Synonyms:exact_synonym: cargo loading into vesicle;   cargo selection


show annotations for term's descendants           Sort by:
vesicle cargo loading term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kif13a kinesin family member 13A involved_in ISO (PMID:19841138) RGD PMID:19841138 NCBI chr17:17,972,227...18,154,763
Ensembl chr17:17,972,325...18,154,760 		JBrowse link
G Mia2 MIA SH3 domain ER export factor 2 involved_in ISO
IBA 		(PMID:27138255)
GO_REF:0000033
(PMID:27170179) 		RGD
GO_Central		 PMID:27138255 PMID:27170179 GO_REF:0000033 NCBI chr 6:82,522,398...82,620,136
Ensembl chr 6:82,522,422...82,620,178 		JBrowse link
G Mia3 MIA SH3 domain ER export factor 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:97,502,040...97,547,155
Ensembl chr13:97,494,275...97,543,587 		JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein involved_in IEA
ISO
ISS 		GO_REF:0000107
(PMID:22539346)
GO_REF:0000024
(PMID:24577224) 		Ensembl
RGD
Alzheimers_University_of_Toronto		 PMID:22539346 PMID:24577224 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:153,468,982...153,550,086
Ensembl chr 1:153,469,202...153,550,237 		JBrowse link
COPII-coated vesicle cargo loading term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cideb cell death-inducing DFFA-like effector b involved_in ISO (PMID:30858281) RGD PMID:30858281 NCBI chr15:33,222,135...33,226,407
Ensembl chr15:33,221,824...33,226,688 		JBrowse link
G ENSRNOG00000070921 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107
G Mia3 MIA SH3 domain ER export factor 3 involved_in ISO (PMID:27138255) RGD PMID:27138255 NCBI chr13:97,502,040...97,547,155
Ensembl chr13:97,494,275...97,543,587 		JBrowse link
G Preb prolactin regulatory element binding acts_upstream_of_or_within ISO (PMID:33186557) RGD PMID:33186557 NCBI chr 6:31,138,757...31,142,544
Ensembl chr 6:31,138,743...31,142,540 		JBrowse link
G Rab1a RAB1A, member RAS oncogene family involved_in ISO (PMID:17684057) RGD PMID:17684057 NCBI chr14:98,623,582...98,648,766
Ensembl chr14:98,623,635...98,661,582 		JBrowse link
G Sar1a secretion associated, Ras related GTPase 1A involved_in ISO
IEA 		(PMID:17499046), (PMID:18843296), (PMID:23433038)
GO_REF:0000107 		RGD
Ensembl		 PMID:17499046 PMID:18843296 PMID:23433038 GO_REF:0000107 NCBI chr20:30,166,310...30,178,718
Ensembl chr20:30,166,334...30,178,710 		JBrowse link
G Sar1b secretion associated, Ras related GTPase 1B involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:23433038), (PMID:32358066), (PMID:33186557) 		UniProt
Ensembl
RGD		 PMID:23433038 PMID:32358066 PMID:33186557 GO_REF:0000024 GO_REF:0000107 NCBI chr10:36,525,365...36,555,009
Ensembl chr10:36,519,384...36,555,005 		JBrowse link
G Scap SREBF chaperone involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 8:119,184,366...119,239,086
Ensembl chr 8:119,184,438...119,239,075 		JBrowse link
G Sec13 SEC13 homolog, nuclear pore and COPII coat complex component involved_in ISO (PMID:17499046), (PMID:18843296) RGD PMID:17499046 PMID:18843296 NCBI chr 4:148,433,344...148,446,735
Ensembl chr 4:148,433,349...148,446,755 		JBrowse link
G Sec23a Sec23 homolog A, COPII coat complex component involved_in ISO
IEA
IBA 		UniProtKB:P15303 (PMID:17499046), (PMID:18843296), (PMID:8898360)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:8898360 PMID:17499046 PMID:18843296 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:82,393,699...82,442,594
Ensembl chr 6:82,394,863...82,440,904 		JBrowse link
G Sec23b Sec23 homolog B, COPII coat complex component involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:152,392,340...152,434,813
Ensembl chr 3:152,392,308...152,434,800 		JBrowse link
G Sec24a SEC24 homolog A, COPII coat complex component involved_in ISO
IBA 		(PMID:17499046), (PMID:18843296)
GO_REF:0000033 		RGD
GO_Central		 PMID:17499046 PMID:18843296 GO_REF:0000033 NCBI chr10:36,450,043...36,525,303
Ensembl chr10:36,450,043...36,525,303 		JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component involved_in ISO
IBA 		(PMID:17499046), (PMID:18843296)
GO_REF:0000033 		RGD
GO_Central		 PMID:17499046 PMID:18843296 GO_REF:0000033 NCBI chr 2:221,236,897...221,306,986
Ensembl chr 2:221,236,898...221,306,919 		JBrowse link
G Sec24c SEC24 homolog C, COPII coat complex component involved_in ISO
IEA
IBA 		(PMID:17499046), (PMID:18843296)
GO_REF:0000117
GO_REF:0000033 		RGD
UniProt
GO_Central		 PMID:17499046 PMID:18843296 GO_REF:0000033 GO_REF:0000117 NCBI chr15:3,651,714...3,674,420
Ensembl chr15:3,651,714...3,673,675 		JBrowse link
G Sec24d SEC24 homolog D, COPII coat complex component involved_in ISO
IEA
IBA 		(PMID:17499046), (PMID:18843296)
GO_REF:0000117
GO_REF:0000033 		RGD
UniProt
GO_Central		 PMID:17499046 PMID:18843296 GO_REF:0000033 GO_REF:0000117 NCBI chr 2:214,103,138...214,211,155
Ensembl chr 2:214,103,190...214,211,144 		JBrowse link
G Sec31a SEC31 homolog A, COPII coat complex component involved_in ISO
IEA
IBA 		(PMID:17499046), (PMID:18843296)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:17499046 PMID:18843296 GO_REF:0000033 GO_REF:0000107 NCBI chr14:9,518,655...9,573,579
Ensembl chr14:9,518,648...9,573,585 		JBrowse link
G Sec31b SEC31 homolog B, COPII coat complex component involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:253,324,081...253,353,779
Ensembl chr 1:253,327,232...253,353,779 		JBrowse link
G Surf4 surfeit 4 involved_in ISO (PMID:33186557) RGD PMID:33186557 NCBI chr 3:30,646,435...30,659,641
Ensembl chr 3:30,638,299...30,661,390 		JBrowse link
G Tbc1d20 TBC1 domain family, member 20 involved_in ISO
IEA 		(PMID:17684057)
GO_REF:0000107 		RGD
Ensembl		 PMID:17684057 GO_REF:0000107 NCBI chr 3:161,228,699...161,247,319
Ensembl chr 3:161,228,785...161,247,316 		JBrowse link
negative regulation of cargo loading into COPII-coated vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Insig1 insulin induced gene 1 involved_in ISO (PMID:15899885) RGD PMID:15899885 NCBI chr 4:8,049,339...8,057,812
Ensembl chr 4:8,049,556...8,057,778 		JBrowse link
G Sar1a secretion associated, Ras related GTPase 1A acts_upstream_of_or_within ISO (PMID:23580231) RGD PMID:23580231 NCBI chr20:30,166,310...30,178,718
Ensembl chr20:30,166,334...30,178,710 		JBrowse link
regulation of cargo loading into COPII-coated vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sar1a secretion associated, Ras related GTPase 1A acts_upstream_of_or_within ISO (PMID:19966784) RGD PMID:19966784 NCBI chr20:30,166,310...30,178,718
Ensembl chr20:30,166,334...30,178,710 		JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component acts_upstream_of_or_within ISO MGI:4440619|MGI:4440621 (PMID:19966784) RGD PMID:19966784 NCBI chr 2:221,236,897...221,306,986
Ensembl chr 2:221,236,898...221,306,919 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20668
    cellular process 19605
      vesicle-mediated transport 1688
        vesicle cargo loading 23
          COPII-coated vesicle cargo loading + 20
          clathrin-coated vesicle cargo loading + 0
Path 2
Term Annotations click to browse term
  biological_process 20668
    localization 5832
      establishment of localization 5111
        transport 4854
          vesicle-mediated transport 1688
            vesicle cargo loading 23
              COPII-coated vesicle cargo loading + 20
              clathrin-coated vesicle cargo loading + 0
paths to the root