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ONTOLOGY REPORT - ANNOTATIONS

Term:vesicle cargo loading
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Accession:GO:0035459 term browser browse the term
Definition:The formation of a macromolecular complex between the coat proteins and proteins and/or lipoproteins that are going to be transported by a vesicle.
Synonyms:exact_synonym: cargo loading into vesicle;   cargo selection


show annotations for term's descendants           Sort by:
vesicle cargo loading term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kif13a kinesin family member 13A involved_in ISO (PMID:19841138) RGD PMID:19841138 NCBI chr17:17,766,597...17,948,517
Ensembl chr17:17,766,597...17,943,615 		JBrowse link
G Mia2 MIA SH3 domain ER export factor 2 involved_in ISO
IBA		 (PMID:27138255)
GO_REF:0000033
(PMID:27170179)		 RGD
GO_Central		 PMID:27138255 PMID:27170179 GO_REF:0000033 NCBI chr 6:76,787,508...76,885,246
Ensembl chr 6:76,787,508...76,885,211 		JBrowse link
G Mia3 MIA SH3 domain ER export factor 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:94,970,421...95,012,071
Ensembl chr13:94,970,424...95,011,972 		JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein involved_in IEA
ISO
ISS		 GO_REF:0000107
(MGI:5432454|PMID:22539346)
GO_REF:0000024
(PMID:24577224)		 Ensembl
RGD
Alzheimers_University_of_Toronto		 PMID:22539346 PMID:24577224 GO_REF:0000024 GO_REF:0000107 MGI:5432454 NCBI chr 1:144,056,415...144,138,045
Ensembl chr 1:144,056,721...144,137,557 		JBrowse link
COPII-coated vesicle cargo loading term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cideb cell death-inducing DFFA-like effector b involved_in ISO (MGI:6399987|PMID:30858281) RGD PMID:30858281 MGI:6399987 NCBI chr15:29,252,208...29,256,482
Ensembl chr15:29,252,213...29,256,605 		JBrowse link
G Mia3 MIA SH3 domain ER export factor 3 involved_in ISO (PMID:27138255) RGD PMID:27138255 NCBI chr13:94,970,421...95,012,071
Ensembl chr13:94,970,424...95,011,972 		JBrowse link
G Rab1a RAB1A, member RAS oncogene family involved_in ISO (PMID:17684057) RGD PMID:17684057 NCBI chr14:94,422,219...94,448,799
Ensembl chr14:94,415,275...94,448,248 		JBrowse link
G Sar1a secretion associated, Ras related GTPase 1A involved_in ISO (PMID:17499046), (PMID:18843296), (PMID:23433038) RGD PMID:17499046 PMID:18843296 PMID:23433038 NCBI chr20:29,623,529...29,635,935
Ensembl chr20:29,623,553...29,635,935 		JBrowse link
G Sar1b secretion associated, Ras related GTPase 1B involved_in ISS
ISO		 GO_REF:0000024
(PMID:23433038), (PMID:32358066), (PMID:33186557)		 UniProt
RGD		 PMID:23433038 PMID:32358066 PMID:33186557 GO_REF:0000024 NCBI chr10:36,024,415...36,054,069
Ensembl chr10:36,024,382...36,054,066 		JBrowse link
G Scap SREBF chaperone involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 8:110,306,026...110,360,677
Ensembl chr 8:110,306,031...110,360,666 		JBrowse link
G Sec13 SEC13 homolog, nuclear pore and COPII coat complex component involved_in ISO (PMID:17499046), (PMID:18843296) RGD PMID:17499046 PMID:18843296 NCBI chr 4:146,877,739...146,891,130
Ensembl chr 4:146,875,524...146,891,173 		JBrowse link
G Sec23a Sec23 homolog A, COPII coat complex component involved_in ISO
IBA		 UniProtKB:P15303 (PMID:17499046), (PMID:18843296), (PMID:8898360)
GO_REF:0000033		 RGD
GO_Central		 PMID:8898360 PMID:17499046 PMID:18843296 GO_REF:0000033 NCBI chr 6:76,658,793...76,706,125
Ensembl chr 6:76,658,427...76,706,035 		JBrowse link
G Sec23b Sec23 homolog B, COPII coat complex component involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:131,939,011...131,981,489
Ensembl chr 3:131,939,337...131,981,489 		JBrowse link
G Sec24a SEC24 homolog A, COPII coat complex component involved_in ISO
IBA		 (PMID:17499046), (PMID:18843296)
GO_REF:0000033		 RGD
GO_Central		 PMID:17499046 PMID:18843296 GO_REF:0000033 NCBI chr10:35,946,901...36,024,353
Ensembl chr10:35,947,031...36,024,353 		JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component involved_in ISO
IBA		 (PMID:17499046), (PMID:18843296)
GO_REF:0000033		 RGD
GO_Central		 PMID:17499046 PMID:18843296 GO_REF:0000033 NCBI chr 2:218,562,670...218,632,753
Ensembl chr 2:218,562,676...218,632,699 		JBrowse link
G Sec24c SEC24 homolog C, COPII coat complex component involved_in ISO
IBA		 (PMID:17499046), (PMID:18843296)
GO_REF:0000033		 RGD
GO_Central		 PMID:17499046 PMID:18843296 GO_REF:0000033 NCBI chr15:3,602,460...3,624,524
Ensembl chr15:3,602,460...3,624,422 		JBrowse link
G Sec24d SEC24 homolog D, COPII coat complex component involved_in ISO
IBA		 (PMID:17499046), (PMID:18843296)
GO_REF:0000033		 RGD
GO_Central		 PMID:17499046 PMID:18843296 GO_REF:0000033 NCBI chr 2:211,418,557...211,526,588
Ensembl chr 2:211,418,623...211,526,587 		JBrowse link
G Sec31a SEC31 homolog A, COPII coat complex component involved_in ISO
IEA
IBA		 (PMID:17499046), (PMID:18843296)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:17499046 PMID:18843296 GO_REF:0000033 GO_REF:0000107 NCBI chr14:9,214,324...9,269,281
Ensembl chr14:9,214,349...9,269,273 		JBrowse link
G Sec31b SEC31 homolog B, COPII coat complex component involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:243,376,283...243,404,557
Ensembl chr 1:243,378,456...243,404,557 		JBrowse link
G Surf4 surfeit 4 involved_in ISO (MGI:6510370|PMID:33186557) RGD PMID:33186557 MGI:6510370 NCBI chr 3:10,248,360...10,261,537
Ensembl chr 3:10,241,837...10,263,315 		JBrowse link
G Tbc1d20 TBC1 domain family, member 20 involved_in ISO (PMID:17684057) RGD PMID:17684057 NCBI chr 3:140,768,537...140,787,010
Ensembl chr 3:140,768,537...140,785,121 		JBrowse link
negative regulation of cargo loading into COPII-coated vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Insig1 insulin induced gene 1 involved_in ISO (PMID:15899885) RGD PMID:15899885 NCBI chr 4:7,315,494...7,323,972
Ensembl chr 4:7,315,495...7,323,952 		JBrowse link
G Sar1a secretion associated, Ras related GTPase 1A acts_upstream_of_or_within ISO (PMID:23580231) RGD PMID:23580231 NCBI chr20:29,623,529...29,635,935
Ensembl chr20:29,623,553...29,635,935 		JBrowse link
regulation of cargo loading into COPII-coated vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sar1a secretion associated, Ras related GTPase 1A acts_upstream_of_or_within ISO (PMID:19966784) RGD PMID:19966784 NCBI chr20:29,623,529...29,635,935
Ensembl chr20:29,623,553...29,635,935 		JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component acts_upstream_of_or_within ISO MGI:4440619|MGI:4440621 (PMID:19966784) RGD PMID:19966784 NCBI chr 2:218,562,670...218,632,753
Ensembl chr 2:218,562,676...218,632,699 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20115
    cellular process 18525
      vesicle-mediated transport 1638
        vesicle cargo loading 21
          COPII-coated vesicle cargo loading + 18
          clathrin-coated vesicle cargo loading + 0
Path 2
Term Annotations click to browse term
  biological_process 20115
    localization 5683
      establishment of localization 4990
        transport 4683
          vesicle-mediated transport 1638
            vesicle cargo loading 21
              COPII-coated vesicle cargo loading + 18
              clathrin-coated vesicle cargo loading + 0
paths to the root