Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:protein localization to synapse
go back to main search page
Accession:GO:0035418 term browser browse the term
Definition:Any process in which a protein is transported to, and/or maintained at the synapse, the junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell.
Synonyms:exact_synonym: protein localisation to synapse


GViewer not supported for the selected species.

show annotations for term's descendants           Sort by:
protein localization to synapse term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asic2 acid sensing ion channel subunit 2 acts_upstream_of_or_within ISO (PMID:19571134) MGI PMID:19571134 NCBI chrNW_004624875:969,857...2,049,531
Ensembl chrNW_004624875:969,626...2,049,061
JBrowse link
G Baiap2 BAR/IMD domain containing adaptor protein 2 ISO RGD PMID:15758177 RGD:9684984 NCBI chrNW_004624801:10,106,815...10,173,191
Ensembl chrNW_004624801:10,106,750...10,173,188
JBrowse link
G Bsn bassoon presynaptic cytomatrix protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624730:3,498,118...3,600,488
Ensembl chrNW_004624730:3,498,257...3,593,450
JBrowse link
G Cdk5 cyclin dependent kinase 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18054859) Ensembl
MGI
PMID:18054859 GO_REF:0000107 NCBI chrNW_004624800:5,562,468...5,566,458
Ensembl chrNW_004624800:5,562,462...5,569,937
JBrowse link
G Dlg4 discs large MAGUK scaffold protein 4 involved_in
acts_upstream_of_or_within
ISO (PMID:15496675)
(PMID:15978582)
PMID:15620359
PMID:12097487
BHF-UCL
MGI
UniProt
PMID:12097487 PMID:15496675 PMID:15620359 PMID:15978582 RGD:8553478 RGD:8553937 NCBI chrNW_004624786:9,811,201...9,835,660
Ensembl chrNW_004624786:9,811,780...9,837,100
JBrowse link
G Dlgap1 DLG associated protein 1 involved_in ISO PMID:15496675 BHF-UCL PMID:15496675 RGD:8553458 NCBI chrNW_004624770:13,543,893...13,841,213
Ensembl chrNW_004624770:13,542,680...13,841,352
JBrowse link
G Homer1 homer scaffold protein 1 involved_in ISO PMID:12867517 BHF-UCL PMID:12867517 RGD:8554389 NCBI chrNW_004624869:3,878,646...4,012,211
Ensembl chrNW_004624869:3,880,001...4,012,240
JBrowse link
G Klc1 kinesin light chain 1 involved_in ISO PMID:19861499 UniProt PMID:19861499 RGD:5683640 NCBI chrNW_004624734:1,221,531...1,275,002
Ensembl chrNW_004624734:1,219,270...1,266,754
JBrowse link
G Lrrtm1 leucine rich repeat transmembrane neuronal 1 acts_upstream_of_or_within ISO (PMID:19285470) MGI PMID:19285470 NCBI chrNW_004624749:22,695,726...22,698,161
Ensembl chrNW_004624749:22,695,241...22,698,604
JBrowse link
G Mpp4 MAGUK p55 scaffold protein 4 acts_upstream_of_or_within ISO (PMID:16520334) MGI PMID:16520334 NCBI chrNW_004624899:175,920...205,398 JBrowse link
G Nlgn1 neuroligin 1 involved_in ISO (MGI:5284797|PMID:15620359), (MGI:5780536|PMID:22960622) BHF-UCL PMID:15620359 PMID:22960622 MGI:5284797 MGI:5780536 NCBI chrNW_004624730:51,451,546...52,300,413
Ensembl chrNW_004624730:51,650,815...52,295,023
JBrowse link
G Nlgn2 neuroligin 2 involved_in ISO (MGI:5284797|PMID:15620359), (MGI:5780536|PMID:22960622) BHF-UCL PMID:15620359 PMID:22960622 MGI:5284797 MGI:5780536 NCBI chrNW_004624786:10,019,307...10,034,624
Ensembl chrNW_004624786:10,022,717...10,034,624
JBrowse link
G Nrxn1 neurexin 1 involved_in ISO (MGI:2665153|PMID:12796785) BHF-UCL PMID:12796785 MGI:2665153 NCBI chrNW_004624738:31,134,551...32,273,596
Ensembl chrNW_004624738:31,133,346...32,273,565
JBrowse link
G Pclo piccolo presynaptic cytomatrix protein involved_in ISO (MGI:5635967|PMID:25652077) ParkinsonsUK-UCL PMID:25652077 MGI:5635967 NCBI chrNW_004624739:31,143,872...31,448,524 JBrowse link
G Reln reelin involved_in ISO (MGI:5286805|PMID:21664258) CACAO PMID:21664258 MGI:5286805 NCBI chrNW_004624739:25,472,626...25,918,064
Ensembl chrNW_004624739:25,472,561...25,918,167
JBrowse link
G Shank1 SH3 and multiple ankyrin repeat domains 1 involved_in ISO (MGI:3775591|PMID:18272690) BHF-UCL PMID:18272690 MGI:3775591 NCBI chrNW_004624832:3,934,525...3,978,607
Ensembl chrNW_004624832:3,938,170...3,976,870
JBrowse link
G Stau1 staufen double-stranded RNA binding protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624790:6,173,160...6,229,487
Ensembl chrNW_004624790:6,172,762...6,229,487
JBrowse link
G Stau2 staufen double-stranded RNA binding protein 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624744:17,434,733...17,726,348
Ensembl chrNW_004624744:17,434,686...17,727,127
JBrowse link
anterograde axonal protein transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dlg2 discs large MAGUK scaffold protein 2 involved_in ISO (MGI:5703671|PMID:26609151) ARUK-UCL PMID:26609151 MGI:5703671 NCBI chrNW_004624845:4,816,734...6,426,548
Ensembl chrNW_004624845:5,028,404...6,421,986
JBrowse link
G Hspb1 heat shock protein family B (small) member 1 involved_in ISO (PMID:23728742) UniProt PMID:23728742 NCBI chrNW_004624740:14,940,161...14,941,561
Ensembl chrNW_004624740:14,939,445...14,941,819
JBrowse link
G Kif5a kinesin family member 5A involved_in ISO PMID:23576431 UniProt PMID:23576431 RGD:13673742 NCBI chrNW_004624802:10,375,132...10,409,575
Ensembl chrNW_004624802:10,375,774...10,409,566
JBrowse link
G Kif5b kinesin family member 5B involved_in ISO PMID:23576431 UniProt PMID:23576431 RGD:13673742 NCBI chrNW_004624805:4,464,538...4,514,784
Ensembl chrNW_004624805:4,465,235...4,514,870
JBrowse link
G Kif5c kinesin family member 5C involved_in ISO PMID:23576431 UniProt PMID:23576431 RGD:13673742 NCBI chrNW_004624866:1,526,647...1,698,113
Ensembl chrNW_004624866:1,526,638...1,698,301
JBrowse link
G Map1a microtubule associated protein 1A involved_in ISO (MGI:5703671|PMID:26609151) ARUK-UCL PMID:26609151 MGI:5703671 NCBI chrNW_004624804:10,611,657...10,632,199
Ensembl chrNW_004624804:10,611,672...10,630,881
JBrowse link
G Mapk8ip3 mitogen-activated protein kinase 8 interacting protein 3 involved_in ISO (MGI:6102023|PMID:28259553)
PMID:21775604
UniProt PMID:21775604 PMID:28259553 MGI:6102023 RGD:13673858 NCBI chrNW_004624913:481,236...529,083
Ensembl chrNW_004624913:481,207...529,070
JBrowse link
G Rab27b RAB27B, member RAS oncogene family involved_in ISO PMID:21775604 UniProt PMID:21775604 RGD:13673858 NCBI chrNW_004624792:166,846...368,906
Ensembl chrNW_004624792:307,608...363,568
JBrowse link
anterograde axonal transport of neurotransmitter receptor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Neto1 neuropilin and tolloid like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624806:8,013,955...8,128,867
Ensembl chrNW_004624806:8,014,353...8,127,078
JBrowse link
establishment of protein localization to postsynaptic membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rapsn receptor associated protein of the synapse ISO RGD PMID:19344765 RGD:8549750 NCBI chrNW_004624767:1,350,820...1,358,107
Ensembl chrNW_004624767:1,351,370...1,358,187
JBrowse link
exocytic insertion of neurotransmitter receptor to postsynaptic membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sacm1l SAC1 like phosphatidylinositide phosphatase involved_in ISO (PMID:32931550) SynGO PMID:32931550 NCBI chrNW_004624730:75,107,294...75,169,527
Ensembl chrNW_004624730:75,113,012...75,169,561
JBrowse link
G Snap23 synaptosome associated protein 23 involved_in ISO PMID:26839408 SynGO PMID:26839408 RGD:12050145 NCBI chrNW_004624804:9,609,777...9,643,670
Ensembl chrNW_004624804:9,610,308...9,641,933
JBrowse link
G Snap25 synaptosome associated protein 25 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624741:11,218,259...11,303,406
Ensembl chrNW_004624741:11,274,490...11,302,813
JBrowse link
G Snap47 synaptosome associated protein 47 involved_in ISO (PMID:23395379) SynGO PMID:23395379 NCBI chrNW_004624937:695,245...728,656
Ensembl chrNW_004624937:687,988...730,674
JBrowse link
G Stx1b syntaxin 1B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624782:14,054,762...14,073,890
Ensembl chrNW_004624782:14,057,346...14,073,911
JBrowse link
G Stx3 syntaxin 3 involved_in ISO (PMID:23395379) SynGO PMID:23395379 NCBI chrNW_004624864:1,054,130...1,091,071
Ensembl chrNW_004624864:1,054,284...1,090,398
JBrowse link
G Stx4 syntaxin 4 involved_in ISO PMID:20434989 SynGO PMID:20434989 RGD:13702188 NCBI chrNW_004624782:14,094,727...14,101,210
Ensembl chrNW_004624782:14,090,850...14,105,058
JBrowse link
G Vamp2 vesicle associated membrane protein 2 involved_in ISO (MGI:5494785|PMID:23395379), (PMID:23395379)
(PMID:23395379)
PMID:26839408
SynGO PMID:23395379 PMID:26839408 MGI:5494785 RGD:12050145 NCBI chrNW_004624786:10,723,791...10,727,654
Ensembl chrNW_004624786:10,724,964...10,727,649
JBrowse link
gephyrin clustering involved in postsynaptic density assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlgn2 neuroligin 2 involved_in
acts_upstream_of_or_within
ISO (MGI:5284797|PMID:15620359)
(PMID:29107521)
BHF-UCL
MGI
PMID:15620359 PMID:29107521 MGI:5284797 NCBI chrNW_004624786:10,019,307...10,034,624
Ensembl chrNW_004624786:10,022,717...10,034,624
JBrowse link
G Nrxn1 neurexin 1 involved_in ISO (MGI:5284797|PMID:15620359), (MGI:5285129|PMID:21424692) BHF-UCL PMID:15620359 PMID:21424692 MGI:5284797 MGI:5285129 NCBI chrNW_004624738:31,134,551...32,273,596
Ensembl chrNW_004624738:31,133,346...32,273,565
JBrowse link
G Nrxn2 neurexin 2 involved_in ISO (MGI:5285129|PMID:21424692) BHF-UCL PMID:21424692 MGI:5285129 NCBI chrNW_004624767:21,659,677...21,768,696
Ensembl chrNW_004624767:21,668,466...21,771,304
JBrowse link
G Slitrk3 SLIT and NTRK like family member 3 acts_upstream_of_or_within ISO (PMID:29107521) MGI PMID:29107521 NCBI chrNW_004624730:43,175,690...43,191,689
Ensembl chrNW_004624730:43,181,820...43,191,531
JBrowse link
G Zdhhc12 zinc finger DHHC-type palmitoyltransferase 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624760:6,273,989...6,276,788
Ensembl chrNW_004624760:6,273,994...6,276,776
JBrowse link
neurotransmitter receptor localization to postsynaptic specialization membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam22 ADAM metallopeptidase domain 22 involved_in ISO (PMID:16990550) SynGO PMID:16990550 NCBI chrNW_004624809:5,190,974...5,448,317
Ensembl chrNW_004624809:5,197,147...5,448,283
JBrowse link
G C1ql2 complement C1q like 2 involved_in ISO (PMID:27133466) SynGO PMID:27133466 NCBI chrNW_004624732:26,031,010...26,034,163
Ensembl chrNW_004624732:26,032,021...26,034,552
JBrowse link
G C1ql3 complement C1q like 3 involved_in ISO (PMID:27133466) SynGO PMID:27133466 NCBI chrNW_004624796:11,239,297...11,246,800
Ensembl chrNW_004624796:11,239,077...11,248,111
JBrowse link
G Cacng2 calcium voltage-gated channel auxiliary subunit gamma 2 involved_in ISO (PMID:18753375) SynGO PMID:18753375 NCBI chrNW_004624752:11,062,059...11,172,357
Ensembl chrNW_004624752:11,062,002...11,170,406
JBrowse link
G Cacng3 calcium voltage-gated channel auxiliary subunit gamma 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624782:9,319,318...9,408,620
Ensembl chrNW_004624782:9,319,277...9,408,821
JBrowse link
G Cacng7 calcium voltage-gated channel auxiliary subunit gamma 7 involved_in ISO (PMID:23872597) SynGO PMID:23872597 NCBI chrNW_004624832:2,529,708...2,546,916
Ensembl chrNW_004624832:2,529,705...2,546,908
JBrowse link
G Cnih3 cornichon family AMPA receptor auxiliary protein 3 involved_in ISO (PMID:23522044) SynGO PMID:23522044 NCBI chrNW_004624835:6,599,726...6,646,615
Ensembl chrNW_004624835:6,599,661...6,643,301
JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624730:62,001,547...62,223,098
Ensembl chrNW_004624730:62,002,280...62,223,319
JBrowse link
G Dlg2 discs large MAGUK scaffold protein 2 involved_in ISO (PMID:17046693) SynGO PMID:17046693 NCBI chrNW_004624845:4,816,734...6,426,548
Ensembl chrNW_004624845:5,028,404...6,421,986
JBrowse link
G Dlg4 discs large MAGUK scaffold protein 4 involved_in ISO (PMID:17046693) SynGO PMID:17046693 NCBI chrNW_004624786:9,811,201...9,835,660
Ensembl chrNW_004624786:9,811,780...9,837,100
JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 involved_in ISO (PMID:22184199) SynGO PMID:22184199 NCBI chrNW_004624795:3,373,313...3,391,509
Ensembl chrNW_004624795:3,373,000...3,391,602
JBrowse link
G Erbb4 erb-b2 receptor tyrosine kinase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624765:3,612,781...4,742,219
Ensembl chrNW_004624765:3,613,379...4,734,585
JBrowse link
G Git1 GIT ArfGAP 1 involved_in ISO PMID:25284783 SynGO PMID:25284783 RGD:13702191 NCBI chrNW_004624786:2,071,376...2,086,929
Ensembl chrNW_004624786:2,071,382...2,086,910
JBrowse link
G Gphn gephyrin involved_in ISO (PMID:10531433)
PMID:8264797
SynGO PMID:8264797 PMID:10531433 RGD:13702318 NCBI chrNW_004624734:33,871,664...34,483,770
Ensembl chrNW_004624734:33,870,997...34,483,508
JBrowse link
G Kalrn kalirin RhoGEF kinase involved_in ISO PMID:18031682 SynGO PMID:18031682 RGD:12050112 NCBI chrNW_004624731:54,934...756,707
Ensembl chrNW_004624731:121,122...752,942
JBrowse link
G Lgi1 leucine rich glioma inactivated 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624737:5,024,691...5,060,248
Ensembl chrNW_004624737:5,024,414...5,060,329
JBrowse link
G Lhfpl4 LHFPL tetraspan subfamily member 4 involved_in ISO (PMID:28279354) SynGO PMID:28279354 NCBI chrNW_004624731:4,194,321...4,222,400
Ensembl chrNW_004624731:4,194,321...4,222,105
JBrowse link
G Neto1 neuropilin and tolloid like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624806:8,013,955...8,128,867
Ensembl chrNW_004624806:8,014,353...8,127,078
JBrowse link
G Neto2 neuropilin and tolloid like 2 involved_in ISO PMID:26720915 SynGO PMID:26720915 RGD:11531528 NCBI chrNW_004624914:636,348...690,708
Ensembl chrNW_004624914:636,417...690,694
JBrowse link
G Nptx1 neuronal pentraxin 1 involved_in ISO PMID:29024665 SynGO PMID:29024665 RGD:13702141 NCBI chrNW_004624801:9,628,878...9,637,869
Ensembl chrNW_004624801:9,628,882...9,637,859
JBrowse link
G Nptx2 neuronal pentraxin 2 involved_in ISO PMID:10399937 SynGO PMID:10399937 RGD:13702159 NCBI chrNW_004624740:32,125,693...32,136,671
Ensembl chrNW_004624740:32,125,715...32,136,659
JBrowse link
G Nptxr neuronal pentraxin receptor involved_in ISO (PMID:27986928) SynGO PMID:27986928 NCBI chrNW_004624752:9,315,834...9,335,205
Ensembl chrNW_004624752:9,315,853...9,336,043
JBrowse link
G Nrxn3 neurexin 3 involved_in ISO (PMID:27133466) SynGO PMID:27133466 NCBI chrNW_004624734:22,161,837...23,757,367
Ensembl chrNW_004624734:22,163,166...23,692,660
JBrowse link
G Olfm2 olfactomedin 2 involved_in ISO (PMID:25218043) SynGO PMID:25218043 NCBI chrNW_004624828:2,134,728...2,200,354
Ensembl chrNW_004624828:2,135,245...2,200,332
JBrowse link
G Rapsn receptor associated protein of the synapse involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624767:1,350,820...1,358,107
Ensembl chrNW_004624767:1,351,370...1,358,187
JBrowse link
G Vwc2 von Willebrand factor C domain containing 2 involved_in ISO (PMID:37591201) SynGO PMID:37591201 NCBI chrNW_004624740:4,100,196...4,234,098
Ensembl chrNW_004624740:4,109,100...4,234,009
JBrowse link
neurotransmitter receptor transport postsynaptic membrane to endosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Erbin erbb2 interacting protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624815:3,765,261...3,901,309
Ensembl chrNW_004624815:3,768,207...3,852,815
JBrowse link
G Lrrc1 leucine rich repeat containing 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624850:1,105,844...1,232,595
Ensembl chrNW_004624850:1,105,926...1,234,504
JBrowse link
G Mkln1 muskelin 1 involved_in ISO (PMID:21482357) SynGO PMID:21482357 NCBI chrNW_004624783:4,891,874...5,074,769
Ensembl chrNW_004624783:4,900,654...5,074,740
JBrowse link
G Rab4a RAB4A, member RAS oncogene family involved_in ISO (PMID:24217640) SynGO PMID:24217640 NCBI chrNW_004624775:19,738,220...19,762,351
Ensembl chrNW_004624775:19,739,086...19,762,436
JBrowse link
G Scrib scribble planar cell polarity protein involved_in ISO PMID:25310985 SynGO PMID:25310985 RGD:12050130 NCBI chrNW_004624735:12,997,358...13,018,765
Ensembl chrNW_004624735:12,997,408...13,018,533
JBrowse link
neurotransmitter receptor transport to postsynaptic membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mapk10 mitogen-activated protein kinase 10 involved_in ISO PMID:23838184 SynGO PMID:23838184 RGD:13702338 NCBI chrNW_004624872:2,460,308...2,830,569
Ensembl chrNW_004624872:2,461,362...2,825,161
JBrowse link
G Mylk myosin light chain kinase involved_in ISO (PMID:26330558) SynGO PMID:26330558 NCBI chrNW_004624912:1,952,053...2,213,196
Ensembl chrNW_004624912:1,953,838...2,172,561
JBrowse link
G Rab27b RAB27B, member RAS oncogene family involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624792:166,846...368,906
Ensembl chrNW_004624792:307,608...363,568
JBrowse link
G Rab8a RAB8A, member RAS oncogene family involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624908:1,119,356...1,132,029
Ensembl chrNW_004624908:1,116,610...1,132,111
JBrowse link
G Sacm1l SAC1 like phosphatidylinositide phosphatase involved_in ISO PMID:23838184 SynGO PMID:23838184 RGD:13702338 NCBI chrNW_004624730:75,107,294...75,169,527
Ensembl chrNW_004624730:75,113,012...75,169,561
JBrowse link
neurotransmitter receptor transport, endosome to postsynaptic membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgap44 Rho GTPase activating protein 44 involved_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624877:662,595...851,762
Ensembl chrNW_004624877:661,998...850,431
JBrowse link
G Erbin erbb2 interacting protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624815:3,765,261...3,901,309
Ensembl chrNW_004624815:3,768,207...3,852,815
JBrowse link
G Grip1 glutamate receptor interacting protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624802:1,558,364...1,954,695
Ensembl chrNW_004624802:1,264,833...1,964,202
JBrowse link
G Grip2 glutamate receptor interacting protein 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624872:1,215,698...1,264,723
Ensembl chrNW_004624872:1,233,797...1,264,722
JBrowse link
G Gripap1 GRIP1 associated protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624893:753,111...778,563
Ensembl chrNW_004624893:753,111...778,539
JBrowse link
G Lrrc1 leucine rich repeat containing 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624850:1,105,844...1,232,595
Ensembl chrNW_004624850:1,105,926...1,234,504
JBrowse link
G Nsg1 neuronal vesicle trafficking associated 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624755:21,507,068...21,529,057
Ensembl chrNW_004624755:21,506,250...21,529,052
JBrowse link
G Rab11a RAB11A, member RAS oncogene family involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624781:6,699,926...6,718,020
Ensembl chrNW_004624781:6,699,926...6,718,545
JBrowse link
G Rab8a RAB8A, member RAS oncogene family involved_in ISO PMID:18045925 SynGO PMID:18045925 RGD:2306457 NCBI chrNW_004624908:1,119,356...1,132,029
Ensembl chrNW_004624908:1,116,610...1,132,111
JBrowse link
G Scrib scribble planar cell polarity protein involved_in ISO PMID:25310985 SynGO PMID:25310985 RGD:12050130 NCBI chrNW_004624735:12,997,358...13,018,765
Ensembl chrNW_004624735:12,997,408...13,018,533
JBrowse link
G Vps35 VPS35 retromer complex component involved_in ISO (PMID:28384478) SynGO PMID:28384478 NCBI chrNW_004624914:160,483...188,534
Ensembl chrNW_004624914:160,483...188,490
JBrowse link
positive regulation of protein localization to synapse term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clstn3 calsyntenin 3 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chrNW_004624860:3,710,121...3,737,617
Ensembl chrNW_004624860:3,709,139...3,738,221
JBrowse link
G Mapt microtubule associated protein tau involved_in ISO (PMID:20655099) ParkinsonsUK-UCL PMID:20655099 NCBI chrNW_004624849:2,320,887...2,421,099 JBrowse link
G Nlgn1 neuroligin 1 ISO RGD PMID:15681343 RGD:8553420 NCBI chrNW_004624730:51,451,546...52,300,413
Ensembl chrNW_004624730:51,650,815...52,295,023
JBrowse link
G Nlgn2 neuroligin 2 acts_upstream_of_or_within ISO (PMID:24613359) RGD
MGI
PMID:15681343 PMID:24613359 RGD:8553420 NCBI chrNW_004624786:10,019,307...10,034,624
Ensembl chrNW_004624786:10,022,717...10,034,624
JBrowse link
G Nlgn3 neuroligin 3 ISO RGD PMID:15681343 RGD:8553420 NCBI chrNW_004624903:1,437,663...1,465,955
Ensembl chrNW_004624903:1,438,428...1,463,172
JBrowse link
protein localization to postsynapse term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zdhhc15 zinc finger DHHC-type palmitoyltransferase 15 involved_in ISO PMID:31189538 UniProt PMID:31189538 RGD:25671406 NCBI chrNW_004624836:5,193,710...5,404,547
Ensembl chrNW_004624836:5,194,177...5,400,516
JBrowse link
protein localization to postsynaptic membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 acts_upstream_of_or_within ISO (PMID:12676993) MGI PMID:12676993 NCBI chrNW_004624760:777,208...800,525
Ensembl chrNW_004624760:776,873...801,354
JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A acts_upstream_of_or_within ISO (PMID:15317856) MGI PMID:15317856 NCBI chrNW_004624824:7,128,169...7,513,360
Ensembl chrNW_004624824:7,137,909...7,507,910
JBrowse link
G Grin2c glutamate ionotropic receptor NMDA type subunit 2C acts_upstream_of_or_within ISO (PMID:15317856) MGI PMID:15317856 NCBI chrNW_004624801:4,697,891...4,713,771
Ensembl chrNW_004624801:4,697,512...4,712,276
JBrowse link
G Zdhhc2 zinc finger DHHC-type palmitoyltransferase 2 involved_in ISO PMID:25589740 UniProt PMID:25589740 RGD:21201275 NCBI chrNW_004624769:22,078,361...22,151,679
Ensembl chrNW_004624769:22,080,073...22,151,626
JBrowse link
regulation of exocytic insertion of neurotransmitter receptor to postsynaptic membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cplx1 complexin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624755:26,265,590...26,286,203
Ensembl chrNW_004624755:26,266,614...26,288,079
JBrowse link
G Epb41l1 erythrocyte membrane protein band 4.1 like 1 involved_in ISO (PMID:19503082) SynGO PMID:19503082 NCBI chrNW_004624842:3,265,880...3,443,535
Ensembl chrNW_004624842:3,265,880...3,459,412
JBrowse link
regulation of neurotransmitter receptor localization to postsynaptic specialization membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam10 ADAM metallopeptidase domain 10 involved_in ISO (PMID:21123580) SynGO PMID:21123580 NCBI chrNW_004624781:13,195,390...13,321,823
Ensembl chrNW_004624781:13,195,755...13,321,823
JBrowse link
G Cacna2d2 calcium voltage-gated channel auxiliary subunit alpha2delta 2 involved_in ISO (PMID:30683685) SynGO PMID:30683685 NCBI chrNW_004624730:4,211,189...4,346,119
Ensembl chrNW_004624730:4,212,901...4,345,849
JBrowse link
G Camk2a calcium/calmodulin dependent protein kinase II alpha involved_in ISO PMID:12202034 SynGO PMID:12202034 RGD:13702166 NCBI chrNW_004624774:9,526,323...9,585,647
Ensembl chrNW_004624774:9,526,323...9,585,649
JBrowse link
G Dag1 dystroglycan 1 involved_in ISO (PMID:27707967) SynGO PMID:27707967 NCBI chrNW_004624730:3,417,356...3,488,300
Ensembl chrNW_004624730:3,417,347...3,488,879
JBrowse link
G Gabarap GABA type A receptor-associated protein involved_in ISO (PMID:33436612) SynGO PMID:33436612 NCBI chrNW_004624786:9,857,370...9,859,675
Ensembl chrNW_004624786:9,857,370...9,860,063
JBrowse link
G Ghsr growth hormone secretagogue receptor involved_in ISO PMID:24367106 SynGO PMID:24367106 RGD:13702206 NCBI chrNW_004624730:50,484,763...50,492,443
Ensembl chrNW_004624730:50,488,887...50,492,405
JBrowse link
G Gpc4 glypican 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624797:13,005,310...13,116,414
Ensembl chrNW_004624797:13,002,646...13,116,180
JBrowse link
G Gpc6 glypican 6 involved_in ISO PMID:22722203 SynGO PMID:22722203 RGD:13702461 NCBI chrNW_004624879:97,125...1,196,747
Ensembl chrNW_004624879:97,257...1,192,604
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in ISO PMID:23864697 SynGO PMID:23864697 RGD:13702314 NCBI chrNW_004624731:28,178,647...28,368,784
Ensembl chrNW_004624731:28,178,628...28,366,420
JBrowse link
G Hras HRas proto-oncogene, GTPase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624766:21,907,423...21,913,414
Ensembl chrNW_004624766:21,911,241...21,913,653
JBrowse link
G Iqsec2 IQ motif and Sec7 domain ArfGEF 2 involved_in ISO (PMID:27009485) SynGO PMID:27009485 NCBI chrNW_004624909:462,724...564,989
Ensembl chrNW_004624909:460,626...565,133
JBrowse link
G Kalrn kalirin RhoGEF kinase involved_in ISO PMID:18031682 SynGO PMID:18031682 RGD:12050112 NCBI chrNW_004624731:54,934...756,707
Ensembl chrNW_004624731:121,122...752,942
JBrowse link
G Kif2c kinesin family member 2C involved_in ISO (PMID:35138249) SynGO PMID:35138249 NCBI chrNW_004624906:633,635...660,149
Ensembl chrNW_004624906:633,754...660,254
JBrowse link
G Magi2 membrane associated guanylate kinase, WW and PDZ domain containing 2 involved_in ISO PMID:22593065 SynGO PMID:22593065 RGD:13702450 NCBI chrNW_004624739:27,132,533...28,430,765
Ensembl chrNW_004624739:27,134,993...28,430,686
JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 involved_in ISO PMID:12202034 SynGO PMID:12202034 RGD:13702166 NCBI chrNW_004624781:6,222,365...6,285,398
Ensembl chrNW_004624781:6,222,365...6,285,531
JBrowse link
G Nbea neurobeachin involved_in ISO (PMID:29847800) SynGO PMID:29847800 NCBI chrNW_004624776:1,784,253...2,502,324
Ensembl chrNW_004624776:1,784,133...2,502,864
JBrowse link
G Neto2 neuropilin and tolloid like 2 involved_in ISO PMID:28717010 SynGO PMID:28717010 RGD:155230759 NCBI chrNW_004624914:636,348...690,708
Ensembl chrNW_004624914:636,417...690,694
JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase involved_in ISO (PMID:28143929) SynGO PMID:28143929 NCBI chrNW_004624903:1,863,110...1,912,299
Ensembl chrNW_004624903:1,863,337...1,910,177
JBrowse link
G Prkcz protein kinase C zeta involved_in ISO PMID:18667614 SynGO PMID:18667614 RGD:13702194 NCBI chrNW_004624818:7,758,192...7,846,950
Ensembl chrNW_004624818:7,759,770...7,847,208
JBrowse link
G Rap1a RAP1A, member of RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624772:7,340,152...7,425,218
Ensembl chrNW_004624772:7,368,653...7,424,938
JBrowse link
G Rapgef4 Rap guanine nucleotide exchange factor 4 involved_in ISO PMID:19734897 SynGO PMID:19734897 RGD:2314692 NCBI chrNW_004624787:10,062,677...10,369,132
Ensembl chrNW_004624787:10,062,717...10,369,632
JBrowse link
G Tmem108 transmembrane protein 108 involved_in ISO (PMID:28096412) SynGO PMID:28096412 NCBI chrNW_004624730:9,314,308...9,683,324
Ensembl chrNW_004624730:9,522,166...9,683,365
JBrowse link
G Tnik TRAF2 and NCK interacting kinase involved_in ISO (PMID:23035106) SynGO PMID:23035106 NCBI chrNW_004624730:49,087,876...49,497,981
Ensembl chrNW_004624730:49,090,222...49,497,646
JBrowse link
G Traf6 TNF receptor associated factor 6 involved_in ISO (PMID:28973854) SynGO PMID:28973854 NCBI chrNW_004624767:10,729,766...10,803,253
Ensembl chrNW_004624767:10,729,413...10,748,455
JBrowse link
G Vps26b VPS26, retromer complex component B involved_in ISO (PMID:34965419) SynGO PMID:34965419 NCBI chrNW_004624812:8,783,350...8,804,755
Ensembl chrNW_004624812:8,783,378...8,804,753
JBrowse link
regulation of neurotransmitter receptor transport, endosome to postsynaptic membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgap44 Rho GTPase activating protein 44 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624877:662,595...851,762
Ensembl chrNW_004624877:661,998...850,431
JBrowse link
G Gripap1 GRIP1 associated protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624893:753,111...778,563
Ensembl chrNW_004624893:753,111...778,539
JBrowse link
regulation of protein localization to synapse term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abhd17b abhydrolase domain containing 17B, depalmitoylase involved_in ISO (MGI:6094388|PMID:27307232) UniProt PMID:27307232 MGI:6094388 NCBI chrNW_004624736:1,175,103...1,218,251
Ensembl chrNW_004624736:1,201,988...1,214,971
JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 involved_in ISO (MGI:5514106|PMID:23676497)
(PMID:23676497)
UniProt PMID:23676497 MGI:5514106 NCBI chrNW_004624730:62,001,547...62,223,098
Ensembl chrNW_004624730:62,002,280...62,223,319
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15028
    localization 4927
      macromolecule localization 2781
        cellular macromolecule localization 2403
          protein localization 2391
            protein localization to cell junction 143
              protein localization to synapse 110
                gephyrin clustering involved in postsynaptic density assembly 5
                positive regulation of protein localization to synapse + 5
                protein localization to postsynapse + 80
                protein localization to presynapse + 9
                regulation of protein localization to synapse + 34
paths to the root