Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:ciliary rootlet
go back to main search page
Accession:GO:0035253 term browser browse the term
Definition:A cytoskeleton-like structure, originating from the basal body at the proximal end of a cilium, and extending proximally toward the cell nucleus. Rootlets are typically 80-100 nm in diameter and contain cross striae distributed at regular intervals of approximately 55-70 nm.
Synonyms:exact_synonym: cilial rootlet;   cilium rootlet



show annotations for term's descendants           Sort by:
 
ciliary rootlet term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G App amyloid beta precursor protein located_in ISO (MGI:3608016|PMID:16018997) RGD PMID:16018997 MGI:3608016 NCBI chr11:24,019,774...24,236,584
Ensembl chr11:24,019,778...24,236,561
JBrowse link
G Crocc ciliary rootlet coiled-coil, rootletin located_in ISO MGI:3580447 (MGI:3580205|PMID:15870283), (MGI:3608016|PMID:16018997), (MGI:4950337|PMID:21212183), (MGI:5467890|PMID:23178122), (MGI:6209354|PMID:29891944) RGD PMID:15870283 PMID:16018997 PMID:21212183 PMID:23178122 PMID:29891944 MGI:3580205 MGI:3608016 MGI:4950337 MGI:5467890 MGI:6209354 NCBI chr 5:153,320,962...153,363,734
Ensembl chr 5:153,320,962...153,363,578
JBrowse link
G Kif5a kinesin family member 5A located_in IEA
ISO
GO_REF:0000107
(MGI:3608016|PMID:16018997)
Ensembl
RGD
PMID:16018997 GO_REF:0000107 MGI:3608016 NCBI chr 7:63,051,894...63,089,024
Ensembl chr 7:63,049,424...63,092,858
JBrowse link
G Kif5b kinesin family member 5B located_in ISO (MGI:3608016|PMID:16018997) RGD PMID:16018997 MGI:3608016 NCBI chr17:51,489,873...51,527,508
Ensembl chr17:51,489,944...51,527,508
JBrowse link
G Kif5c kinesin family member 5C located_in IEA
ISO
GO_REF:0000107
(MGI:3608016|PMID:16018997)
Ensembl
RGD
PMID:16018997 GO_REF:0000107 MGI:3608016 NCBI chr 3:34,032,082...34,185,597
Ensembl chr 3:34,032,105...34,182,413
JBrowse link
G Klc1 kinesin light chain 1 located_in ISO PR:Q8CJ40 (MGI:3608016|PMID:16018997) RGD PMID:16018997 MGI:3608016 NCBI chr 6:130,823,416...130,866,729
Ensembl chr 6:130,823,419...130,867,031
JBrowse link
G Klc2 kinesin light chain 2 located_in ISO PR:Q8CJ40 (MGI:3608016|PMID:16018997) RGD PMID:16018997 MGI:3608016 NCBI chr 1:202,414,555...202,424,787
Ensembl chr 1:202,414,557...202,424,672
JBrowse link
G Klc3 kinesin light chain 3 located_in ISO PR:Q8CJ40 (MGI:3608016|PMID:16018997) RGD PMID:16018997 MGI:3608016 NCBI chr 1:79,045,842...79,055,809
Ensembl chr 1:79,045,844...79,055,416
JBrowse link
G Nek4 NIMA-related kinase 4 IDA RGD PMID:21685204 RGD:13204813 NCBI chr16:6,144,900...6,185,376
Ensembl chr16:6,144,959...6,188,932
JBrowse link
G Pjvk pejvakin located_in ISO (MGI:5887150|PMID:28209736) RGD PMID:28209736 MGI:5887150 NCBI chr 3:61,594,644...61,605,051
Ensembl chr 3:61,596,641...61,605,045
JBrowse link
G Psen1 presenilin 1 located_in
is_active_in
ISO
IBA
(MGI:3608016|PMID:16018997)
PMID:21873635
RGD PMID:16018997 PMID:21873635 MGI:3608016, RGD:13792537 NCBI chr 6:103,323,014...103,375,088
Ensembl chr 6:103,323,120...103,371,650
JBrowse link
G Psen2 presenilin 2 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:91,967,506...91,993,240
Ensembl chr13:91,967,983...91,993,174
JBrowse link
G Rab28 RAB28, member RAS oncogene family located_in IDA PMID:23746546 UniProt PMID:23746546 RGD:8554122 NCBI chr14:69,245,846...69,322,968
Ensembl chr14:69,245,854...69,322,967
JBrowse link
G Rpgrip1 RPGR interacting protein 1 IDA RGD PMID:21685204 RGD:13204813 NCBI chr15:24,814,576...24,867,522
Ensembl chr15:24,814,614...24,868,605
JBrowse link
G Rpgrip1l Rpgrip1-like IDA RGD PMID:21685204 RGD:13204813 NCBI chr19:15,692,189...15,785,083
Ensembl chr19:15,692,150...15,785,083
JBrowse link
G Spag5 sperm associated antigen 5 located_in ISO (MGI:5488669|PMID:23351521) RGD PMID:23351521 MGI:5488669 NCBI chr10:63,198,717...63,216,746
Ensembl chr10:63,198,768...63,216,745
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 19969
    cellular anatomical entity 19676
      ciliary rootlet 16
Path 2
Term Annotations click to browse term
  cellular_component 19969
    cellular anatomical entity 19676
      organelle 13088
        non-membrane-bounded organelle 4906
          intracellular non-membrane-bounded organelle 4906
            cytoskeleton 2205
              ciliary rootlet 16
paths to the root