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ONTOLOGY REPORT - ANNOTATIONS

Term:synaptic transmission, glutamatergic
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Accession:GO:0035249 term browser browse the term
Definition:The vesicular release of glutamate from a presynapse, across a chemical synapse, the subsequent activation of glutamate receptors at the postsynapse of a target cell (neuron, muscle, or secretory cell) and the effects of this activation on the postsynaptic membrane potential and ionic composition of the postsynaptic cytosol. This process encompasses both spontaneous and evoked release of neurotransmitter and all parts of synaptic vesicle exocytosis. Evoked transmission starts with the arrival of an action potential at the presynapse.


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synaptic transmission, glutamatergic term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abtb3 ankyrin repeat and BTB domain containing 3 acts_upstream_of_or_within ISO
IEA 		MGI:5141270|MGI:7493862 (PMID:37261953)
GO_REF:0000107 		RGD
Ensembl		 PMID:37261953 GO_REF:0000107 NCBI chr 7:18,035,151...18,310,718
Ensembl chr 7:18,036,083...18,310,834 		JBrowse link
G Adora2a adenosine A2a receptor IDA RGD PMID:16644907 RGD:1625443 NCBI chr20:13,315,270...13,332,802
Ensembl chr20:13,315,853...13,333,386 		JBrowse link
G Adrb2 adrenoceptor beta 2 IMP RGD PMID:17175110 RGD:5129150 NCBI chr18:57,912,760...57,914,802
Ensembl chr18:55,502,903...55,644,512 		JBrowse link
G Als2 alsin Rho guanine nucleotide exchange factor ALS2 acts_upstream_of_or_within ISO
IEA 		MGI:3522476 (PMID:17093100)
GO_REF:0000107 		RGD
Ensembl		 PMID:17093100 GO_REF:0000107 NCBI chr 9:60,613,182...60,686,394
Ensembl chr 9:60,613,167...60,670,737 		JBrowse link
G Aph1b aph-1 homolog B, gamma secretase subunit acts_upstream_of_or_within ISO MGI:1915568 (PMID:18626010) RGD PMID:18626010 NCBI chr 8:67,429,198...67,454,735
Ensembl chr 8:67,429,198...67,450,243 		JBrowse link
G Cacna1a calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO MGI:1856209|MGI:2181384 (PMID:10322048), (PMID:14973254) RGD PMID:10322048 PMID:14973254 NCBI chr19:40,425,560...40,724,810
Ensembl chr19:23,520,741...23,823,225 		JBrowse link
G Cacnb4 calcium voltage-gated channel auxiliary subunit beta 4 acts_upstream_of_or_within ISO
IEA 		MGI:1856936 (PMID:10322048)
GO_REF:0000107 		RGD
Ensembl		 PMID:10322048 GO_REF:0000107 NCBI chr 3:57,315,900...57,578,271
Ensembl chr 3:36,910,427...37,168,944 		JBrowse link
G Cdh8 cadherin 8 acts_upstream_of_or_within ISO
IEA 		MGI:3707077 (PMID:17392463)
GO_REF:0000107 		RGD
Ensembl		 PMID:17392463 GO_REF:0000107 NCBI chr19:5,494,552...5,901,950
Ensembl chr19:5,494,174...5,895,669 		JBrowse link
G Cdk5 cyclin-dependent kinase 5 acts_upstream_of_or_within ISO
IEA 		(PMID:14769920)
GO_REF:0000107 		RGD
Ensembl		 PMID:14769920 GO_REF:0000107 NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112 		JBrowse link
G Clcn3 chloride voltage-gated channel 3 acts_upstream_of_or_within ISO MGI:2183297 (PMID:11182090) RGD PMID:11182090 NCBI chr16:29,127,152...29,200,133
Ensembl chr16:29,127,419...29,200,119 		JBrowse link
G Clstn3 calsyntenin 3 acts_upstream_of_or_within ISO
IEA 		MGI:5521290 (PMID:24094106)
GO_REF:0000107 		RGD
Ensembl		 PMID:24094106 GO_REF:0000107 NCBI chr 4:159,017,795...159,051,069
Ensembl chr 4:157,331,494...157,364,769 		JBrowse link
G Cnih2 cornichon family AMPA receptor auxiliary protein 2 acts_upstream_of_or_within
involved_in 		IDA
IBA 		PMID:19265014
GO_REF:0000033 		GO_Central PMID:19265014 GO_REF:0000033, RGD:8554136 NCBI chr 1:202,399,416...202,405,110
Ensembl chr 1:202,399,419...202,405,089 		JBrowse link
G Cnih3 cornichon family AMPA receptor auxiliary protein 3 acts_upstream_of_or_within
involved_in 		IDA
IBA 		PMID:19265014
GO_REF:0000033 		GO_Central PMID:19265014 GO_REF:0000033, RGD:8554136 NCBI chr13:93,016,707...93,208,168
Ensembl chr13:93,099,784...93,208,121 		JBrowse link
G Dcdc2 doublecortin domain containing 2 acts_upstream_of_or_within ISO MGI:5288003 (PMID:24094509), (PMID:26250775) RGD PMID:24094509 PMID:26250775 NCBI chr17:39,845,952...40,031,781
Ensembl chr17:39,845,952...40,030,743 		JBrowse link
G Drd1 dopamine receptor D1 acts_upstream_of ISO
IEA 		MGI:1857158 (PMID:8795639)
GO_REF:0000107 		RGD
Ensembl		 PMID:8795639 GO_REF:0000107 NCBI chr17:10,545,488...10,550,029
Ensembl chr17:10,540,558...10,545,002 		JBrowse link
G Dscam DS cell adhesion molecule acts_upstream_of_or_within ISO
IEA 		(PMID:34848499)
GO_REF:0000107 		RGD
Ensembl		 PMID:34848499 GO_REF:0000107 NCBI chr11:35,921,924...36,507,100
Ensembl chr11:35,926,896...36,507,415 		JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within ISO
IEA 		(PMID:22411800)
GO_REF:0000107 		RGD
Ensembl		 PMID:22411800 GO_REF:0000107 NCBI chr 7:86,265,651...86,544,488
Ensembl chr 7:84,375,784...84,655,357 		JBrowse link
G Gria1 glutamate ionotropic receptor AMPA type subunit 1 involved_in NAS
IBA 		PMID:15269270
GO_REF:0000033 		GO_Central PMID:15269270 GO_REF:0000033, RGD:8553901 NCBI chr10:41,210,713...41,527,283
Ensembl chr10:41,210,713...41,527,283 		JBrowse link
G Gria2 glutamate ionotropic receptor AMPA type subunit 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:168,247,490...168,367,616
Ensembl chr 2:165,947,521...166,069,510 		JBrowse link
G Gria3 glutamate ionotropic receptor AMPA type subunit 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:125,103,975...125,369,690
Ensembl chr  X:120,238,534...120,504,096 		JBrowse link
G Gria4 glutamate ionotropic receptor AMPA type subunit 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:9,845,421...10,320,021
Ensembl chr 8:1,562,119...2,034,979 		JBrowse link
G Grid1 glutamate ionotropic receptor delta type subunit 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:10,138,564...10,885,803
Ensembl chr16:10,138,925...10,885,808 		JBrowse link
G Grid2 glutamate ionotropic receptor delta type subunit 2 acts_upstream_of_or_within
involved_in 		ISO
IEA
IBA 		MGI:2178052 (PMID:7766857)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:7766857 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:92,415,019...93,892,472
Ensembl chr 4:92,415,230...93,889,355 		JBrowse link
G Grik1 glutamate ionotropic receptor kainate type subunit 1 acts_upstream_of_or_within
involved_in 		ISO
IBA 		MGI:2176347|MGI:3623113|MGI:95815 (PMID:15509753), (PMID:15928066)
GO_REF:0000033 		RGD
GO_Central		 PMID:15509753 PMID:15928066 GO_REF:0000033 NCBI chr11:27,169,739...27,571,131
Ensembl chr11:27,169,740...27,570,645 		JBrowse link
G Grik2 glutamate ionotropic receptor kainate type subunit 2 acts_upstream_of_or_within
involved_in 		ISO
IEA
IBA 		MGI:1857979 (PMID:15509753), (PMID:9580260)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:9580260 PMID:15509753 GO_REF:0000033 GO_REF:0000107 NCBI chr20:52,135,325...52,833,061
Ensembl chr20:52,133,851...52,838,375 		JBrowse link
G Grik3 glutamate ionotropic receptor kainate type subunit 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:137,767,865...137,989,617
Ensembl chr 5:137,767,865...137,984,307 		JBrowse link
G Grik4 glutamate ionotropic receptor kainate type subunit 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:42,903,043...43,331,990
Ensembl chr 8:42,905,056...43,193,751 		JBrowse link
G Grik5 glutamate ionotropic receptor kainate type subunit 5 acts_upstream_of_or_within
involved_in 		ISO
IEA
IBA 		MGI:2668206 (PMID:12533602)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:12533602 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:89,733,736...89,795,769
Ensembl chr 1:80,605,892...80,667,125 		JBrowse link
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 acts_upstream_of_or_within ISO MGI:1928270|MGI:1928279|MGI:1928281 (PMID:10963597), (PMID:8313466) RGD PMID:8313466 PMID:10963597 NCBI chr 3:28,501,836...28,528,754
Ensembl chr 3:8,103,680...8,130,603 		JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:6,136,458...6,560,003
Ensembl chr10:5,631,369...6,044,637 		JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:170,297,811...170,775,420
Ensembl chr 4:168,599,546...169,042,279 		JBrowse link
G Grin2c glutamate ionotropic receptor NMDA type subunit 2C involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:100,987,410...101,006,064
Ensembl chr10:100,488,431...100,506,427 		JBrowse link
G Grin2d glutamate ionotropic receptor NMDA type subunit 2D involved_in IMP
IBA 		GO_REF:0000033 GO_Central
RGD		 PMID:15107472 GO_REF:0000033, RGD:1642397 NCBI chr 1:105,443,317...105,483,400
Ensembl chr 1:96,308,365...96,344,793 		JBrowse link
G Grin3a glutamate ionotropic receptor NMDA type subunit 3A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:64,006,847...64,206,408
Ensembl chr 5:64,009,980...64,206,085 		JBrowse link
G Grin3b glutamate ionotropic receptor NMDA type subunit 3B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:9,730,861...9,737,183
Ensembl chr 7:9,730,862...9,737,183 		JBrowse link
G Grm4 glutamate metabotropic receptor 4 involved_in TAS PMID:11906782 UniProt PMID:11906782 RGD:8554275 NCBI chr20:5,484,172...5,572,821
Ensembl chr20:5,481,124...5,572,821 		JBrowse link
G Grm8 glutamate metabotropic receptor 8 involved_in IDA PMID:15275822 UniProt PMID:15275822 RGD:6484726 NCBI chr 4:55,805,762...56,731,690
Ensembl chr 4:55,805,955...56,730,831 		JBrowse link
G Napa NSF attachment protein alpha involved_in
acts_upstream_of_or_within 		IBA
IEA
ISO 		GO_REF:0000033
GO_REF:0000107
MGI:104562 (PMID:21040848) 		GO_Central
Ensembl
RGD		 PMID:21040848 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:76,787,036...76,805,869
Ensembl chr 1:76,786,932...76,805,869 		JBrowse link
G Napb NSF attachment protein beta involved_in
acts_upstream_of_or_within 		IBA
IEA
ISO 		GO_REF:0000033
GO_REF:0000107
MGI:104563 (PMID:21040848) 		GO_Central
Ensembl
RGD		 PMID:21040848 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:136,132,248...136,179,280
Ensembl chr 3:136,133,428...136,179,345 		JBrowse link
G Nps neuropeptide S acts_upstream_of ISO
IEA 		(PMID:21437203)
GO_REF:0000107 		RGD
Ensembl		 PMID:21437203 GO_REF:0000107 NCBI chr 1:199,505,772...199,510,915
Ensembl chr 1:190,077,040...190,080,821 		JBrowse link
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 involved_in IEA
ISO 		GO_REF:0000107
(PMID:29890290) 		Ensembl
RGD		 PMID:29890290 GO_REF:0000107 NCBI chr18:31,522,783...31,644,508
Ensembl chr18:31,271,681...31,393,375 		JBrowse link
G P2rx1 purinergic receptor P2X 1 IMP RGD PMID:16000618 RGD:1581702 NCBI chr10:57,618,586...57,633,648
Ensembl chr10:57,618,586...57,633,623 		JBrowse link
G Plat plasminogen activator, tissue type IMP RGD PMID:15496678 RGD:1581924 NCBI chr16:75,943,061...76,022,037
Ensembl chr16:69,240,585...69,268,223 		JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase acts_upstream_of_or_within ISO
IEA 		MGI:2678247 (PMID:12915482)
GO_REF:0000107 		RGD
Ensembl		 PMID:12915482 GO_REF:0000107 NCBI chr 1:51,236,410...52,430,242
Ensembl chr 1:48,690,556...49,882,555 		JBrowse link
G Shc3 SHC adaptor protein 3 acts_upstream_of_or_within ISO MGI:1933356 (PMID:15716419) RGD PMID:15716419 NCBI chr17:13,803,980...13,924,433
Ensembl chr17:13,651,202...13,772,710 		JBrowse link
G Slc17a6 solute carrier family 17 member 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:101,212,489...101,252,543
Ensembl chr 1:101,212,489...101,252,542 		JBrowse link
G Slc17a7 solute carrier family 17 member 7 involved_in
acts_upstream_of_or_within 		IBA
ISO 		GO_REF:0000033
MGI:3617803 (PMID:15118123) 		GO_Central
RGD		 PMID:15118123 GO_REF:0000033 NCBI chr 1:104,786,172...104,798,049
Ensembl chr 1:95,649,745...95,661,588 		JBrowse link
G Slc17a8 solute carrier family 17 member 8 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:23,994,212...24,049,498
Ensembl chr 7:23,994,217...24,048,079 		JBrowse link
G Tnr tenascin R acts_upstream_of ISO
IEA 		MGI:2154583 (PMID:11161481)
GO_REF:0000107 		RGD
Ensembl		 PMID:11161481 GO_REF:0000107 NCBI chr13:74,285,141...74,706,174
Ensembl chr13:72,091,585...72,167,641 		JBrowse link
G Unc13a unc-13 homolog A involved_in
acts_upstream_of_or_within 		IBA
ISO 		GO_REF:0000033
MGI:1342278|MGI:2449468 (PMID:11792326), (PMID:11832228) 		GO_Central
RGD		 PMID:11792326 PMID:11832228 GO_REF:0000033 NCBI chr16:18,333,910...18,381,813
Ensembl chr16:18,336,229...18,381,872 		JBrowse link
G Unc13b unc-13 homolog B involved_in
acts_upstream_of_or_within 		IBA
ISO 		GO_REF:0000033
MGI:2449706|MGI:3051532 (PMID:11792326), (PMID:11832228) 		GO_Central
RGD		 PMID:11792326 PMID:11832228 GO_REF:0000033 NCBI chr 5:62,084,809...62,299,884
Ensembl chr 5:57,289,227...57,502,926 		JBrowse link
G Unc13c unc-13 homolog C involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:74,247,026...74,697,629
Ensembl chr 8:74,247,899...74,673,223 		JBrowse link
G Vps54 VPS54 subunit of GARP complex involved_in IEA
ISO 		GO_REF:0000107
MGI:1857091 (PMID:29890290) 		Ensembl
RGD		 PMID:29890290 GO_REF:0000107 NCBI chr14:99,580,120...99,657,178
Ensembl chr14:95,378,012...95,455,857 		JBrowse link
G Zzef1 zinc finger ZZ-type and EF-hand domain containing 1 acts_upstream_of_or_within ISO MGI:3796166 (PMID:25709106) RGD PMID:25709106 NCBI chr10:57,413,265...57,550,888
Ensembl chr10:57,411,149...57,549,568 		JBrowse link
glutamate secretion, neurotransmission term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc8 ATP binding cassette subfamily C member 8 acts_upstream_of_or_within ISO
IEA 		MGI:1100508 (PMID:17883401)
GO_REF:0000107 		RGD
Ensembl		 PMID:17883401 GO_REF:0000107 NCBI chr 1:105,734,992...105,816,272
Ensembl chr 1:96,598,647...96,679,510 		JBrowse link
G Kcnj8 potassium inwardly-rectifying channel, subfamily J, member 8 acts_upstream_of_or_within ISO
IEA 		MGI:1352629 (PMID:17883401)
GO_REF:0000107 		RGD
Ensembl		 PMID:17883401 GO_REF:0000107 NCBI chr 4:177,240,692...177,246,548
Ensembl chr 4:175,508,912...175,515,603 		JBrowse link
G Nf1 neurofibromin 1 acts_upstream_of_or_within ISO
IEA 		MGI:1339975 (PMID:25242307)
GO_REF:0000107 		RGD
Ensembl		 PMID:25242307 GO_REF:0000107 NCBI chr10:64,803,986...65,037,086
Ensembl chr10:64,306,301...64,536,658 		JBrowse link
G Pak1 p21 (RAC1) activated kinase 1 acts_upstream_of_or_within ISO MGI:97306 (PMID:25242307) RGD PMID:25242307 NCBI chr 1:161,522,399...161,637,623
Ensembl chr 1:152,111,188...152,226,383 		JBrowse link
negative regulation of synaptic transmission, glutamatergic term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora1 adenosine A1 receptor IDA K+-evoked glutamate release RGD PMID:16481441 RGD:1625231 NCBI chr13:45,658,872...45,695,821
Ensembl chr13:45,658,872...45,695,801 		JBrowse link
G Atad1 ATPase family, AAA domain containing 1 involved_in ISS
ISO 		GO_REF:0000024
(PMID:21496646) 		UniProt
RGD		 PMID:21496646 GO_REF:0000024 NCBI chr 1:230,544,227...230,610,524
Ensembl chr 1:230,544,047...230,596,548 		JBrowse link
G Drd2 dopamine receptor D2 involved_in
acts_upstream_of_or_within 		IBA
IEA
ISO 		GO_REF:0000033
GO_REF:0000107
MGI:1857875 (PMID:11160501) 		GO_Central
Ensembl
RGD		 PMID:11160501 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:58,605,403...58,669,339
Ensembl chr 8:49,708,927...49,772,875 		JBrowse link
G Drd3 dopamine receptor D3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:70,385,586...70,437,793
Ensembl chr11:56,879,689...56,940,596 		JBrowse link
G Grik1 glutamate ionotropic receptor kainate type subunit 1 acts_upstream_of_or_within IDA
ISO 		MGI:95815 (PMID:11985817) RGD PMID:11985817 PMID:17395219 RGD:1642466 NCBI chr11:27,169,739...27,571,131
Ensembl chr11:27,169,740...27,570,645 		JBrowse link
G Grik2 glutamate ionotropic receptor kainate type subunit 2 involved_in
acts_upstream_of_or_within 		IDA
IEA
ISO 		PMID:16420445
GO_REF:0000107
MGI:95814 (PMID:11985817) 		Ensembl
RGD		 PMID:11985817 PMID:16420445 GO_REF:0000107, RGD:8554693 NCBI chr20:52,135,325...52,833,061
Ensembl chr20:52,133,851...52,838,375 		JBrowse link
G Grik3 glutamate ionotropic receptor kainate type subunit 3 involved_in IDA PMID:16420445 UniProt PMID:16420445 RGD:8554693 NCBI chr 5:137,767,865...137,989,617
Ensembl chr 5:137,767,865...137,984,307 		JBrowse link
G Htr1b 5-hydroxytryptamine receptor 1B IMP RGD PMID:17392733 RGD:1626454 NCBI chr 8:91,395,405...91,414,815
Ensembl chr 8:82,517,360...82,534,549 		JBrowse link
G Htr2a 5-hydroxytryptamine receptor 2A IMP RGD PMID:17016851 RGD:1624386 NCBI chr15:56,360,647...56,428,703
Ensembl chr15:49,950,804...50,020,928 		JBrowse link
G Myo5a myosin VA IMP RGD PMID:27771352 RGD:41412185 NCBI chr 8:75,811,985...75,980,049
Ensembl chr 8:75,812,412...75,975,918 		JBrowse link
G Npy2r neuropeptide Y receptor Y2 IMP RGD PMID:16190896 RGD:1642508 NCBI chr 2:167,901,999...167,912,165
Ensembl chr 2:167,903,879...167,905,024 		JBrowse link
G Pla2g6 phospholipase A2 group VI IMP RGD PMID:15132431 RGD:6482754 NCBI chr 7:112,731,803...112,771,978
Ensembl chr 7:110,851,378...110,891,114 		JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase IMP RGD PMID:19033459 RGD:10413844 NCBI chr 1:51,236,410...52,430,242
Ensembl chr 1:48,690,556...49,882,555 		JBrowse link
positive regulation of glutamate neurotransmitter secretion in response to membrane depolarization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dtnbp1 dystrobrevin binding protein 1 IMP RGD PMID:15345706 RGD:11251758 NCBI chr17:19,891,313...19,982,770
Ensembl chr17:19,685,215...19,776,661 		JBrowse link
G Rab3gap1 RAB3 GTPase activating protein catalytic subunit 1 involved_in ISS
ISO 		GO_REF:0000024
(PMID:16782817) 		ParkinsonsUK-UCL
RGD		 PMID:16782817 GO_REF:0000024 NCBI chr13:41,908,179...41,981,611
Ensembl chr13:39,352,247...39,429,169 		JBrowse link
positive regulation of glutamate secretion, neurotransmission term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kmo kynurenine 3-monooxygenase IMP RGD PMID:15829251 RGD:13513901 NCBI chr13:90,089,340...90,121,108
Ensembl chr13:87,557,286...87,588,881 		JBrowse link
G Stxbp1 syntaxin binding protein 1 IMP RGD PMID:16951547 RGD:12904030 NCBI chr 3:36,474,428...36,536,120
Ensembl chr 3:16,076,391...16,138,369 		JBrowse link
positive regulation of synaptic transmission, glutamatergic term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcyap1 adenylate cyclase activating polypeptide 1 IDA RGD PMID:16483357 RGD:2325299 NCBI chr 9:120,550,236...120,569,096
Ensembl chr 9:113,103,718...113,109,773 		JBrowse link
G Adora2a adenosine A2a receptor IDA K+-evoked glutamate release RGD PMID:16481441 RGD:1625231 NCBI chr20:13,315,270...13,332,802
Ensembl chr20:13,315,853...13,333,386 		JBrowse link
G Cacng2 calcium voltage-gated channel auxiliary subunit gamma 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:111,451,605...111,579,071
Ensembl chr 7:109,574,459...109,697,227 		JBrowse link
G Cacng3 calcium voltage-gated channel auxiliary subunit gamma 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:186,632,334...186,728,220
Ensembl chr 1:177,201,288...177,297,024 		JBrowse link
G Cacng4 calcium voltage-gated channel auxiliary subunit gamma 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:93,183,410...93,245,470
Ensembl chr10:92,683,761...92,746,126 		JBrowse link
G Cacng5 calcium voltage-gated channel auxiliary subunit gamma 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:93,327,142...93,369,244
Ensembl chr10:92,829,196...92,869,614 		JBrowse link
G Cacng7 calcium voltage-gated channel auxiliary subunit gamma 7 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:74,715,483...74,746,669
Ensembl chr 1:65,800,355...65,831,006 		JBrowse link
G Cacng8 calcium voltage-gated channel auxiliary subunit gamma 8 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:74,670,767...74,691,003
Ensembl chr 1:65,755,334...65,779,089 		JBrowse link
G Cckbr cholecystokinin B receptor IMP RGD PMID:18088282 RGD:2311325 NCBI chr 1:169,183,578...169,193,583
Ensembl chr 1:159,771,733...159,814,881 		JBrowse link
G Ccl2 C-C motif chemokine ligand 2 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:29993042) 		UniProt
Ensembl
RGD		 PMID:29993042 GO_REF:0000024 GO_REF:0000107 NCBI chr10:67,503,077...67,504,875
Ensembl chr10:67,005,424...67,007,226 		JBrowse link
G Ccr2 C-C motif chemokine receptor 2 involved_in ISS
ISO 		GO_REF:0000024
(PMID:29993042) 		UniProt
RGD		 PMID:29993042 GO_REF:0000024 NCBI chr 8:132,611,883...132,619,106
Ensembl chr 8:123,734,430...123,742,100 		JBrowse link
G Drd1 dopamine receptor D1 acts_upstream_of_or_within ISO
IEA 		MGI:1857158 (PMID:8795639)
GO_REF:0000107 		RGD
Ensembl		 PMID:8795639 GO_REF:0000107 NCBI chr17:10,545,488...10,550,029
Ensembl chr17:10,540,558...10,545,002 		JBrowse link
G Egfr epidermal growth factor receptor IMP RGD PMID:16648628 RGD:1581898 NCBI chr14:95,378,626...95,551,358
Ensembl chr14:91,177,067...91,344,382 		JBrowse link
G Glul glutamate-ammonia ligase IMP RGD PMID:10696145 RGD:2301558 NCBI chr13:68,519,500...68,585,554
Ensembl chr13:66,025,630...66,035,108 		JBrowse link
G Gria4 glutamate ionotropic receptor AMPA type subunit 4 involved_in IMP PMID:11036266 UniProt PMID:11036266 RGD:8554601 NCBI chr 8:9,845,421...10,320,021
Ensembl chr 8:1,562,119...2,034,979 		JBrowse link
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 involved_in IDA
ISS 		PMID:19793963
GO_REF:0000114 		ComplexPortal PMID:19793963 GO_REF:0000114, RGD:150521643 NCBI chr 3:28,501,836...28,528,754
Ensembl chr 3:8,103,680...8,130,603 		JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A involved_in IDA
ISS 		PMID:19793963
GO_REF:0000114 		ComplexPortal PMID:19793963 GO_REF:0000114, RGD:150521643 NCBI chr10:6,136,458...6,560,003
Ensembl chr10:5,631,369...6,044,637 		JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B involved_in IDA
ISS 		PMID:19793963
GO_REF:0000114 		ComplexPortal PMID:19793963 GO_REF:0000114, RGD:150521643 NCBI chr 4:170,297,811...170,775,420
Ensembl chr 4:168,599,546...169,042,279 		JBrowse link
G Grin2c glutamate ionotropic receptor NMDA type subunit 2C involved_in IDA PMID:19793963 ComplexPortal PMID:19793963 RGD:150521643 NCBI chr10:100,987,410...101,006,064
Ensembl chr10:100,488,431...100,506,427 		JBrowse link
G Grin2d glutamate ionotropic receptor NMDA type subunit 2D involved_in IDA PMID:19793963 ComplexPortal PMID:19793963 RGD:150521643 NCBI chr 1:105,443,317...105,483,400
Ensembl chr 1:96,308,365...96,344,793 		JBrowse link
G Hdac6 histone deacetylase 6 IMP RGD PMID:22331421 RGD:9681553 NCBI chr  X:17,222,538...17,244,373
Ensembl chr  X:14,551,044...14,572,441 		JBrowse link
G Iqsec2 IQ motif and Sec7 domain ArfGEF 2 IMP RGD PMID:27009485 RGD:11049506 NCBI chr  X:24,734,202...24,816,566
Ensembl chr  X:21,254,914...21,336,584 		JBrowse link
G Ngfr nerve growth factor receptor IMP medial septum and diagonal band of Broca (MS-DBB) neurons stimulated by NGF RGD PMID:18256260 RGD:5508750 NCBI chr10:81,012,077...81,030,305
Ensembl chr10:80,515,299...80,533,518 		JBrowse link
G Nlgn1 neuroligin 1 involved_in IMP
NAS
IDA 		PMID:19628693
PMID:16846852
PMID:19730411 		CACAO
ComplexPortal
BHF-UCL		 PMID:19628693 PMID:16846852 PMID:19730411 RGD:8554760, RGD:151356651, RGD:8554379 NCBI chr 2:110,184,987...111,110,316
Ensembl chr 2:108,257,824...109,002,464 		JBrowse link
G Nlgn2 neuroligin 2 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:15620359)
GO_REF:0000107 		BHF-UCL
RGD
Ensembl		 PMID:15620359 GO_REF:0000024 GO_REF:0000107 NCBI chr10:55,042,175...55,056,578
Ensembl chr10:54,544,588...54,558,434 		JBrowse link
G Nlgn3 neuroligin 3 involved_in ISS
ISO 		GO_REF:0000024
(PMID:21642956) 		BHF-UCL
RGD		 PMID:21642956 GO_REF:0000024 NCBI chr  X:70,469,251...70,497,380
Ensembl chr  X:66,429,458...66,451,876 		JBrowse link
G Nps neuropeptide S involved_in
acts_upstream_of_or_within 		IBA
IEA
ISO 		GO_REF:0000033
GO_REF:0000107
(PMID:21437203) 		GO_Central
Ensembl
RGD		 PMID:21437203 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:199,505,772...199,510,915
Ensembl chr 1:190,077,040...190,080,821 		JBrowse link
G Nrxn1 neurexin 1 involved_in ISS
NAS
ISO
IEA 		GO_REF:0000024
PMID:16846852
(PMID:19098102)
(PMID:19822762)
GO_REF:0000107 		BHF-UCL
RGD
Ensembl		 PMID:19098102 PMID:19822762 PMID:16846852 GO_REF:0000024 GO_REF:0000107, RGD:151356651 NCBI chr 6:8,931,360...10,077,381
Ensembl chr 6:3,177,897...4,322,710 		JBrowse link
G Ntrk1 neurotrophic receptor tyrosine kinase 1 IMP RGD PMID:21550171 RGD:5144124 NCBI chr 2:175,534,844...175,551,664
Ensembl chr 2:173,236,963...173,253,770 		JBrowse link
G Ntrk2 neurotrophic receptor tyrosine kinase 2 IMP RGD PMID:16983663 RGD:1626130 NCBI chr17:5,560,558...5,875,899
Ensembl chr17:5,559,043...5,869,136 		JBrowse link
G Oxtr oxytocin receptor IMP RGD PMID:18510735 RGD:2304108 NCBI chr 4:147,154,374...147,171,723
Ensembl chr 4:145,599,561...145,614,674 		JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 IMP RGD PMID:18764909 RGD:2300272 NCBI chr13:64,714,063...64,722,320
Ensembl chr13:62,163,932...62,172,188 		JBrowse link
G Ptk2b protein tyrosine kinase 2 beta involved_in IMP PMID:11239437 Alzheimers_University_of_Toronto PMID:11239437 RGD:8553497 NCBI chr15:44,536,275...44,656,754
Ensembl chr15:40,360,723...40,481,282 		JBrowse link
G Reln reelin involved_in ISO (PMID:17229826), (PMID:20357114), (PMID:21814183) RGD PMID:17229826 PMID:20357114 PMID:21814183 NCBI chr 4:13,628,440...14,055,201
Ensembl chr 4:12,736,130...13,162,211 		JBrowse link
G Ror2 receptor tyrosine kinase-like orphan receptor 2 IMP RGD PMID:25825749 RGD:11537351 NCBI chr17:12,124,749...12,300,044
Ensembl chr17:11,972,830...12,148,152 		JBrowse link
G Shank2 SH3 and multiple ankyrin repeat domains 2 involved_in ISO (PMID:22699619) RGD PMID:22699619 NCBI chr 1:208,575,144...209,020,300
Ensembl chr 1:199,169,429...199,589,394 		JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 involved_in IEA
ISO
ISS 		GO_REF:0000107
(PMID:21167025), (PMID:21423165), (PMID:21795692)
GO_REF:0000024 		Ensembl
RGD
BHF-UCL		 PMID:21167025 PMID:21423165 PMID:21795692 PMID:21795692 GO_REF:0000024 GO_REF:0000107, RGD:7349315 NCBI chr 7:122,448,323...122,518,623
Ensembl chr 7:120,570,402...120,630,374 		JBrowse link
G Tnr tenascin R acts_upstream_of_or_within ISO
IEA 		MGI:2154583 (PMID:11161481)
GO_REF:0000107 		RGD
Ensembl		 PMID:11161481 GO_REF:0000107 NCBI chr13:74,285,141...74,706,174
Ensembl chr13:72,091,585...72,167,641 		JBrowse link
G Tshz3 teashirt zinc finger homeobox 3 involved_in ISS
ISO 		GO_REF:0000024
(PMID:27668656) 		UniProt
RGD		 PMID:27668656 GO_REF:0000024 NCBI chr 1:98,525,584...98,597,428
Ensembl chr 1:89,381,858...89,460,874 		JBrowse link
regulation of glutamate secretion, neurotransmission term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc38a2 solute carrier family 38, member 2 involved_in IDA PMID:18832333 UniProt PMID:18832333 RGD:152995567 NCBI chr 7:129,730,450...129,742,619
Ensembl chr 7:127,851,267...127,863,436 		JBrowse link
regulation of synaptic transmission, glutamatergic term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk5 cyclin-dependent kinase 5 involved_in IEA
ISO 		GO_REF:0000107
(PMID:24607229) 		Ensembl
RGD		 PMID:24607229 GO_REF:0000107 NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112 		JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in ISO
IEA 		(PMID:29135436)
GO_REF:0000107 		RGD
Ensembl		 PMID:29135436 GO_REF:0000107 NCBI chr 1:181,156,071...181,169,458
Ensembl chr 1:181,156,073...181,167,434 		JBrowse link
G Cnr1 cannabinoid receptor 1 IMP RGD PMID:19725112 RGD:2314643 NCBI chr 5:53,204,867...53,230,396
Ensembl chr 5:48,408,574...48,435,099 		JBrowse link
G Dgki diacylglycerol kinase, iota acts_upstream_of_or_within ISO
IEA 		MGI:3584141 (PMID:21119615)
GO_REF:0000107 		RGD
Ensembl		 PMID:21119615 GO_REF:0000107 NCBI chr 4:65,410,878...65,872,733
Ensembl chr 4:65,420,108...65,872,733 		JBrowse link
G Disc1 DISC1 scaffold protein acts_upstream_of_or_within IMP PMID:24706880 MGI PMID:24706880 RGD:11344933 NCBI chr19:53,014,201...53,223,617
Ensembl chr19:53,014,616...53,219,778 		JBrowse link
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 involved_in ISO
IEA 		(PMID:25318560)
GO_REF:0000107 		RGD
Ensembl		 PMID:25318560 GO_REF:0000107 NCBI chr 1:237,794,969...237,798,650
Ensembl chr 1:228,381,521...228,385,202 		JBrowse link
G Frrs1l ferric-chelate reductase 1-like acts_upstream_of_or_within ISO
IEA 		(PMID:29276473)
GO_REF:0000107 		RGD
Ensembl		 PMID:29276473 GO_REF:0000107 NCBI chr 5:71,655,911...71,690,132
Ensembl chr 5:71,659,284...71,690,108 		JBrowse link
G Fxr1 FMR1 autosomal homolog 1 involved_in ISS
ISO 		GO_REF:0000024
(PMID:25456134) 		UniProt
RGD		 PMID:25456134 GO_REF:0000024 NCBI chr 2:118,812,287...118,865,813
Ensembl chr 2:116,884,248...116,937,590 		JBrowse link
G Gria2 glutamate ionotropic receptor AMPA type subunit 2 involved_in IMP PMID:9697854 UniProt PMID:9697854 RGD:8553822 NCBI chr 2:168,247,490...168,367,616
Ensembl chr 2:165,947,521...166,069,510 		JBrowse link
G Grm1 glutamate metabotropic receptor 1 involved_in IDA
IBA 		PMID:11530226
GO_REF:0000033 		GO_Central PMID:11530226 GO_REF:0000033, RGD:8553469 NCBI chr 1:6,878,542...7,273,447
Ensembl chr 1:5,058,292...5,453,170 		JBrowse link
G Grm2 glutamate metabotropic receptor 2 involved_in NAS
IBA 		PMID:15993439
GO_REF:0000033 		GO_Central PMID:15993439 GO_REF:0000033, RGD:8553886 NCBI chr 8:107,280,099...107,293,159
Ensembl chr 8:107,280,099...107,293,146 		JBrowse link
G Grm3 glutamate metabotropic receptor 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:24,364,854...24,643,972
Ensembl chr 4:24,365,115...24,609,804 		JBrowse link
G Grm4 glutamate metabotropic receptor 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:5,484,172...5,572,821
Ensembl chr20:5,481,124...5,572,821 		JBrowse link
G Grm5 glutamate metabotropic receptor 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:141,310,069...141,884,980
Ensembl chr 1:141,312,368...141,882,274 		JBrowse link
G Grm6 glutamate metabotropic receptor 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:35,167,985...35,182,717
Ensembl chr10:35,167,985...35,182,717 		JBrowse link
G Grm7 glutamate metabotropic receptor 7 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:143,730,862...144,613,230
Ensembl chr 4:143,731,259...144,612,344 		JBrowse link
G Grm8 glutamate metabotropic receptor 8 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:55,805,762...56,731,690
Ensembl chr 4:55,805,955...56,730,831 		JBrowse link
G Homer1 homer scaffold protein 1 involved_in ISS
IMP 		GO_REF:0000024
PMID:19345194 		UniProt PMID:19345194 GO_REF:0000024, RGD:8553291 NCBI chr 2:26,279,012...26,388,279
Ensembl chr 2:24,543,093...24,644,785 		JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:24464040) 		ParkinsonsUK-UCL
Ensembl
RGD		 PMID:24464040 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:124,706,246...124,867,234
Ensembl chr 7:122,826,696...122,987,703 		JBrowse link
G Mapk8ip2 mitogen-activated protein kinase 8 interacting protein 2 involved_in ISO
IEA 		(PMID:21048139)
GO_REF:0000107 		RGD
Ensembl		 PMID:21048139 GO_REF:0000107 NCBI chr 7:122,406,350...122,416,602
Ensembl chr 7:120,526,732...120,536,982 		JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISO (PMID:18599438) RGD PMID:18599438 NCBI chr 2:15,708,732...15,871,639
Ensembl chr 2:13,993,438...14,132,880 		JBrowse link
G Mir142 microRNA 142 involved_in ISO (PMID:28100738) RGD PMID:28100738 NCBI chr10:73,055,104...73,055,190
Ensembl chr10:72,557,857...72,557,967 		JBrowse link
G Nlgn3 neuroligin 3 involved_in ISS
ISO 		GO_REF:0000024
(PMID:21808020) 		BHF-UCL
RGD		 PMID:21808020 GO_REF:0000024 NCBI chr  X:70,469,251...70,497,380
Ensembl chr  X:66,429,458...66,451,876 		JBrowse link
G Ophn1 oligophrenin 1 involved_in
acts_upstream_of_or_within 		IBA
IEA
ISO 		GO_REF:0000033
GO_REF:0000107
(PMID:19481455) 		GO_Central
Ensembl
RGD		 PMID:19481455 GO_REF:0000033 GO_REF:0000107 NCBI chr  X:63,599,746...63,976,678
Ensembl chr  X:63,603,042...63,976,633 		JBrowse link
G Plppr4 phospholipid phosphatase related 4 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:19766573)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:19766573 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:205,371,317...205,412,302
Ensembl chr 2:205,371,322...205,412,302 		JBrowse link
G Prkaca protein kinase cAMP-activated catalytic subunit alpha IDA RGD PMID:12562968 RGD:1580676 NCBI chr19:41,059,843...41,083,189
Ensembl chr19:24,155,090...24,178,430 		JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within ISO
IEA 		MGI:1930937 (PMID:10097174)
GO_REF:0000107 		RGD
Ensembl		 PMID:10097174 GO_REF:0000107 NCBI chr 6:109,054,160...109,106,191
Ensembl chr 6:103,323,120...103,371,650 		JBrowse link
G Rnf167 ring finger protein 167 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:23129617) 		UniProt
Ensembl
RGD		 PMID:23129617 GO_REF:0000024 GO_REF:0000107 NCBI chr10:55,360,603...55,364,927
Ensembl chr10:55,360,543...55,364,927 		JBrowse link
G Serpine2 serpin family E member 2 acts_upstream_of_or_within ISO
IEA 		MGI:2387774 (PMID:15509762)
GO_REF:0000107 		RGD
Ensembl		 PMID:15509762 GO_REF:0000107 NCBI chr 9:88,573,138...88,637,252
Ensembl chr 9:81,124,804...81,188,826 		JBrowse link
G Syt1 synaptotagmin 1 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:12526776) 		ParkinsonsUK-UCL
Ensembl
RGD		 PMID:12526776 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:43,813,204...44,358,020
Ensembl chr 7:43,815,785...44,357,803 		JBrowse link
G Tprg1l tumor protein p63 regulated 1-like involved_in IMP PMID:26212709 UniProt PMID:26212709 RGD:13792549 NCBI chr 5:164,722,151...164,725,358
Ensembl chr 5:164,710,285...164,725,425 		JBrowse link
G Ucn urocortin IDA RGD PMID:15102917 RGD:1642787 NCBI chr 6:25,238,120...25,238,950
Ensembl chr 6:25,238,120...25,238,950 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20543
    cellular process 19534
      cell communication 7907
        cell-cell signaling 1491
          synaptic signaling 1011
            trans-synaptic signaling 967
              anterograde trans-synaptic signaling 959
                chemical synaptic transmission 959
                  synaptic transmission, glutamatergic 128
                    glutamate secretion, neurotransmission + 9
                    negative regulation of synaptic transmission, glutamatergic + 13
                    positive regulation of synaptic transmission, glutamatergic + 43
                    regulation of synaptic transmission, glutamatergic + 88
Path 2
Term Annotations click to browse term
  biological_process 20543
    biological regulation 13835
      regulation of biological process 13398
        signaling 7874
          cell-cell signaling 1491
            synaptic signaling 1011
              trans-synaptic signaling 967
                anterograde trans-synaptic signaling 959
                  chemical synaptic transmission 959
                    synaptic transmission, glutamatergic 128
                      glutamate secretion, neurotransmission + 9
                      negative regulation of synaptic transmission, glutamatergic + 13
                      positive regulation of synaptic transmission, glutamatergic + 43
                      regulation of synaptic transmission, glutamatergic + 88
paths to the root