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ONTOLOGY REPORT - ANNOTATIONS


Term:tube morphogenesis
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Accession:GO:0035239 term browser browse the term
Definition:The process in which the anatomical structures of a tube are generated and organized. Epithelial and endothelial tubes transport gases, liquids and cells from one site to another and form the basic structure of many organs and tissues, with tube shape and organization varying from the single-celled excretory organ in Caenorhabditis elegans to the branching trees of the mammalian kidney and insect tracheal system.



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tube morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp7 bone morphogenetic protein 7 acts_upstream_of_or_within ISO (MGI:3575981|PMID:15831470) RGD PMID:15831470 MGI:3575981 NCBI chr 3:161,639,915...161,716,938
Ensembl chr 3:161,516,462...161,716,788
JBrowse link
G Foxa1 forkhead box A1 acts_upstream_of_or_within ISO MGI:2384404 (MGI:3603077|PMID:15987773) RGD PMID:15987773 MGI:3603077 NCBI chr 6:75,099,907...75,136,534
Ensembl chr 6:75,103,503...75,136,188
JBrowse link
G Gata4 GATA binding protein 4 acts_upstream_of_or_within ISO MGI:107516 (MGI:3790568|PMID:18400219) RGD PMID:18400219 MGI:3790568 NCBI chr15:37,459,601...37,531,291
Ensembl chr15:37,459,601...37,505,636
JBrowse link
G Gata6 GATA binding protein 6 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:95664 (MGI:3790568|PMID:18400219)
Ensembl
RGD
PMID:18400219 GO_REF:0000107 MGI:3790568 NCBI chr18:2,188,121...2,219,532
Ensembl chr18:2,188,121...2,219,532
JBrowse link
G Gbx2 gastrulation brain homeobox 2 acts_upstream_of_or_within ISO MGI:1857634 (MGI:3588904|PMID:15996652) RGD PMID:15996652 MGI:3588904 NCBI chr 9:90,509,633...90,512,212
Ensembl chr 9:90,509,633...90,512,212
JBrowse link
G Lgr4 leucine-rich repeat-containing G protein-coupled receptor 4 acts_upstream_of_or_within ISO MGI:3052121 (MGI:3617054|PMID:16406039) RGD PMID:16406039 MGI:3617054 NCBI chr 3:96,447,385...96,550,006
Ensembl chr 3:96,447,858...96,548,899
JBrowse link
G Pdpn podoplanin acts_upstream_of_or_within IDA PMID:12853470 MGI PMID:12853470 RGD:8553558 NCBI chr 5:155,601,691...155,635,656
Ensembl chr 5:155,601,691...155,635,656
JBrowse link
G Wnt4 Wnt family member 4 acts_upstream_of_or_within ISO MGI:1857453 (MGI:3624584|PMID:16546160) RGD PMID:16546160 MGI:3624584 NCBI chr 5:149,513,573...149,535,415
Ensembl chr 5:149,514,018...149,532,859
JBrowse link
angioblast cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccr3 C-C motif chemokine receptor 3 IMP RGD PMID:18954648 RGD:4890013 NCBI chr 8:123,586,100...123,634,178
Ensembl chr 8:123,616,236...123,634,990
JBrowse link
angiogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ackr3 atypical chemokine receptor 3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:90,799,682...90,811,246
Ensembl chr 9:90,799,686...90,811,237
JBrowse link
G Actg1 actin, gamma 1 acts_upstream_of_or_within_positive_effect ISO (PMID:25705373) RGD PMID:25705373 NCBI chr10:105,619,738...105,622,587
Ensembl chr10:105,619,737...105,624,232
JBrowse link
G Acvrl1 activin A receptor like type 1 involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:16752392)
PMID:21873635
MGI:2155980|MGI:2155981 (MGI:1354528|PMID:10716993), (MGI:1926692|PMID:11062473)
RGD PMID:10716993 PMID:11062473 PMID:16752392 PMID:21873635 MGI:1354528 MGI:1926692, RGD:13792537 NCBI chr 7:132,239,200...132,256,592
Ensembl chr 7:132,239,729...132,256,591
JBrowse link
G Adam15 ADAM metallopeptidase domain 15 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:174,754,631...174,765,136
Ensembl chr 2:174,754,633...174,765,113
JBrowse link
G Adam8 ADAM metallopeptidase domain 8 involved_in ISO (MGI:5009375|PMID:19003792) RGD PMID:19003792 MGI:5009375 NCBI chr 1:194,776,559...194,789,330
Ensembl chr 1:194,770,060...194,788,801
JBrowse link
G Adgra2 adhesion G protein-coupled receptor A2 acts_upstream_of_or_within ISO MGI:4949903 (MGI:4949015|PMID:21421844) RGD PMID:21421844 MGI:4949015 NCBI chr16:64,932,964...64,971,433
Ensembl chr16:64,933,315...64,971,483
JBrowse link
G Adgrg1 adhesion G protein-coupled receptor G1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:21724588)
UniProt
Ensembl
RGD
PMID:21724588 GO_REF:0000024 GO_REF:0000107 NCBI chr19:10,003,963...10,041,122
Ensembl chr19:10,003,975...10,041,108
JBrowse link
G Adm2 adrenomedullin 2 involved_in ISO (PMID:20596610) RGD PMID:20596610 NCBI chr 7:120,393,219...120,394,965
Ensembl chr 7:120,393,179...120,396,331
JBrowse link
G Adra2b adrenoceptor alpha 2B acts_upstream_of_or_within ISO MGI:1857118 (MGI:2181858|PMID:12068299) RGD PMID:12068299 MGI:2181858 NCBI chr 3:114,585,174...114,589,220
Ensembl chr 3:114,585,169...114,589,355
JBrowse link
G Amot angiomotin involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:108,982,399...109,041,265
Ensembl chr  X:108,984,022...109,041,272
JBrowse link
G Amotl1 angiomotin-like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:11,348,651...11,467,564
Ensembl chr 8:11,353,674...11,467,573
JBrowse link
G Amotl2 angiomotin like 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:103,303,368...103,319,161
Ensembl chr 8:103,302,992...103,318,910
JBrowse link
G Ang angiogenin involved_in
acts_upstream_of_or_within
ISO (PMID:17125737), (PMID:2479414)
(PMID:8448182)
RGD PMID:2479414 PMID:8448182 PMID:17125737 NCBI chr15:24,317,733...24,323,361 JBrowse link
G Ang2 angiogenin, ribonuclease A family, member 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:24,398,383...24,415,837
Ensembl chr15:24,398,419...24,398,922
JBrowse link
G Angpt1 angiopoietin 1 acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:1351100|PMID:10617467), (MGI:3805145|PMID:18505784)
PMID:21873635
RGD PMID:10617467 PMID:18505784 PMID:21873635 MGI:1351100 MGI:3805145, RGD:13792537 NCBI chr 7:73,528,345...73,783,953
Ensembl chr 7:73,531,486...73,784,067
JBrowse link
G Angpt2 angiopoietin 2 involved_in
acts_upstream_of_or_within
IEP
IBA
ISO
PMID:21873635
MGI:103178 (MGI:3629544|PMID:16778080)
RGD PMID:16778080 PMID:16439712 PMID:21873635 MGI:3629544, RGD:2314218, RGD:13792537 NCBI chr16:71,088,364...71,138,805
Ensembl chr16:71,088,364...71,138,804
JBrowse link
G Angpt4 angiopoietin 4 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:140,420,389...140,454,213
Ensembl chr 3:140,420,389...140,453,583
JBrowse link
G Angptl4 angiopoietin-like 4 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:14,550,288...14,557,797
Ensembl chr 7:14,550,311...14,556,519
JBrowse link
G Anpep alanyl aminopeptidase, membrane involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:133,767,332...133,810,137
Ensembl chr 1:133,767,332...133,785,789
JBrowse link
G Anxa2 annexin A2 involved_in
acts_upstream_of_or_within
ISO (PMID:11866539)
MGI:3028929 (MGI:3027337|PMID:14702107)
RGD PMID:11866539 PMID:14702107 MGI:3027337 NCBI chr 8:70,105,268...70,141,663
Ensembl chr 8:70,105,253...70,141,658
JBrowse link
G Apela apelin receptor early endogenous ligand involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr16:24,694,231...24,703,466
Ensembl chr16:24,694,324...24,703,465
JBrowse link
G Apln apelin involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:127,180,801...127,213,567
Ensembl chr  X:127,203,823...127,213,391
JBrowse link
G Aplnr apelin receptor involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:70,217,407...70,221,052
Ensembl chr 3:70,217,385...70,221,050
JBrowse link
G Apold1 apolipoprotein L domain containing 1 involved_in IEP
IBA
PMID:21873635 RGD
GO_Central
PMID:15102925 PMID:21873635 RGD:1303988, RGD:13792537 NCBI chr 4:167,768,437...167,825,706
Ensembl chr 4:167,818,271...167,825,706
JBrowse link
G Arhgap24 Rho GTPase activating protein 24 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr14:6,800,631...7,184,001
Ensembl chr14:6,800,631...7,183,823
JBrowse link
G Atp5f1b ATP synthase F1 subunit beta involved_in IEA
ISO
GO_REF:0000107
(PMID:17510399)
Ensembl
RGD
PMID:17510399 GO_REF:0000107 NCBI chr 7:515,454...521,858
Ensembl chr 7:515,460...567,273
JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within ISO MGI:3042751 (MGI:3039210|PMID:15070745) RGD PMID:15070745 MGI:3039210 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
JBrowse link
G C1galt1 core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1 involved_in
acts_upstream_of_or_within
ISO (PMID:17228361)
MGI:3531503 (MGI:3531500|PMID:14745002)
RGD PMID:14745002 PMID:17228361 MGI:3531500 NCBI chr 4:35,930,743...35,966,102
Ensembl chr 4:35,928,104...35,961,831
JBrowse link
G Calcrl calcitonin receptor like receptor involved_in ISO
IBA
(PMID:20596610)
PMID:21873635
RGD PMID:20596610 PMID:21873635 RGD:13792537 NCBI chr 3:69,428,348...69,525,910
Ensembl chr 3:69,430,120...69,525,910
JBrowse link
G Cald1 caldesmon 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:63,265,781...63,446,936
Ensembl chr 4:63,265,942...63,446,932
JBrowse link
G Casp8 caspase 8 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(MGI:6401035|PMID:31748744)
MGI:3609638 (MGI:3609631|PMID:12404118)
UniProt
RGD
PMID:12404118 PMID:31748744 GO_REF:0000024 MGI:3609631 MGI:6401035 NCBI chr 9:60,263,863...60,312,542
Ensembl chr 9:60,264,075...60,312,542
JBrowse link
G Cav1 caveolin 1 acts_upstream_of_or_within ISO MGI:95516 (MGI:3629009|PMID:12759260) RGD PMID:12759260 MGI:3629009 NCBI chr 4:45,640,624...45,673,708
Ensembl chr 4:45,634,918...45,673,705
JBrowse link
G Ccdc134 coiled-coil domain containing 134 acts_upstream_of_or_within ISO MGI:6117856 (MGI:6112839|PMID:29115376) RGD PMID:29115376 MGI:6112839 NCBI chr 7:113,644,557...113,659,050
Ensembl chr 7:113,644,639...113,659,050
JBrowse link
G Ccl12 C-C motif chemokine ligand 12 involved_in ISO (MGI:4943388|PMID:18334747) RGD PMID:18334747 MGI:4943388 NCBI chr10:67,070,230...67,071,780
Ensembl chr10:67,070,230...67,071,780
JBrowse link
G Ccn2 cellular communication network factor 2 acts_upstream_of_or_within TAS
ISO
MGI:2663631 (MGI:1333654|PMID:10082563), (MGI:1342849|PMID:10446209), (MGI:2660724|PMID:12736220) RGD PMID:10082563 PMID:10446209 PMID:12736220 PMID:12193543 MGI:1333654 MGI:1342849 MGI:2660724, RGD:628364 NCBI chr 1:20,802,199...20,805,315
Ensembl chr 1:20,802,199...20,805,734
JBrowse link
G Ccn3 cellular communication network factor 3 involved_in ISO
ISS
(PMID:12695522)
GO_REF:0000024
RGD
UniProt
PMID:12695522 GO_REF:0000024 NCBI chr 7:86,094,000...86,101,022
Ensembl chr 7:86,094,000...86,101,019
JBrowse link
G Cfh complement factor H acts_upstream_of_or_within ISO (MGI:5883383|PMID:28057640) RGD PMID:28057640 MGI:5883383 NCBI chr13:51,512,376...51,613,829
Ensembl chr13:51,511,828...51,613,838
JBrowse link
G Cib1 calcium and integrin binding 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:134,178,331...134,183,895
Ensembl chr 1:134,178,331...134,213,423
JBrowse link
G Clic4 chloride intracellular channel 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3838012 (MGI:3837628|PMID:19197003)
Ensembl
RGD
PMID:19197003 GO_REF:0000107 MGI:3837628 NCBI chr 5:147,456,819...147,513,278
Ensembl chr 5:147,453,712...147,513,452
JBrowse link
G Col15a1 collagen type XV alpha 1 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:61,501,963...61,607,591
Ensembl chr 5:61,501,963...61,607,591
JBrowse link
G Col18a1 collagen type XVIII alpha 1 chain involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:2179134 (MGI:2177972|PMID:11927538), (MGI:3046127|PMID:15188432)
RGD PMID:11927538 PMID:15188432 PMID:21873635 MGI:2177972 MGI:3046127, RGD:13792537 NCBI chr20:11,474,104...11,582,593
Ensembl chr20:11,474,104...11,582,593
JBrowse link
G Col22a1 collagen type XXII alpha 1 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:103,730,939...103,968,452
Ensembl chr 7:103,731,037...103,968,462
JBrowse link
G Col24a1 collagen type XXIV alpha 1 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:234,212,256...234,469,445
Ensembl chr 2:234,212,324...234,469,441
JBrowse link
G Cspg4 chondroitin sulfate proteoglycan 4 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 8:57,264,962...57,300,010
Ensembl chr 8:57,264,962...57,300,010
JBrowse link
G Cxcr3 C-X-C motif chemokine receptor 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:66,844,318...66,846,969
Ensembl chr  X:66,844,318...66,846,969
JBrowse link
G Cyp1b1 cytochrome P450, family 1, subfamily b, polypeptide 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2154690 (MGI:3829820|PMID:19005183)
Ensembl
RGD
PMID:19005183 GO_REF:0000107 MGI:3829820 NCBI chr 6:15,342,312...15,350,886
Ensembl chr 6:15,342,344...15,350,917
JBrowse link
G Dab2ip DAB2 interacting protein involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:18,915,290...19,086,282
Ensembl chr 3:18,915,290...19,086,280
JBrowse link
G Dicer1 dicer 1 ribonuclease III acts_upstream_of_or_within ISO MGI:3576927|MGI:3719397 (MGI:3576395|PMID:15613470), (MGI:3718936|PMID:17613256) RGD PMID:15613470 PMID:17613256 MGI:3576395 MGI:3718936 NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965
JBrowse link
G Dll4 delta like canonical Notch ligand 4 acts_upstream_of_or_within ISO MGI:3056460|MGI:5302387 (MGI:3056004|PMID:15466160), (MGI:5509072|PMID:23918385) RGD PMID:15466160 PMID:23918385 MGI:3056004 MGI:5509072 NCBI chr 3:106,317,114...106,327,004
Ensembl chr 3:106,316,986...106,326,931
JBrowse link
G Dysf dysferlin acts_upstream_of_or_within ISO MGI:3055139 (MGI:5433472|PMID:20724702) RGD PMID:20724702 MGI:5433472 NCBI chr 4:116,490,877...116,690,709
Ensembl chr 4:116,490,616...116,690,709
JBrowse link
G Ecm1 extracellular matrix protein 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:183,287,491...183,292,729
Ensembl chr 2:183,287,322...183,292,671
JBrowse link
G Edn2 endothelin 2 involved_in ISO
IEA
MGI:105923 (MGI:5511071|PMID:24043815)
GO_REF:0000107
RGD
Ensembl
PMID:24043815 GO_REF:0000107 MGI:5511071 NCBI chr 5:133,751,316...133,756,814
Ensembl chr 5:133,751,217...133,756,814
JBrowse link
G Ednra endothelin receptor type A involved_in ISO MGI:95284 (MGI:5511071|PMID:24043815) RGD PMID:24043815 MGI:5511071 NCBI chr19:30,233,540...30,303,727
Ensembl chr19:30,233,571...30,297,049
JBrowse link
G Efna1 ephrin A1 NAS RGD PMID:12615978 RGD:1299268 NCBI chr 2:174,681,676...174,690,306
Ensembl chr 2:174,681,682...174,690,866
JBrowse link
G Egf epidermal growth factor involved_in ISO
IEA
(PMID:15611079)
GO_REF:0000107
RGD
Ensembl
PMID:15611079 GO_REF:0000107 NCBI chr 2:218,219,408...218,302,370
Ensembl chr 2:218,219,415...218,302,064
JBrowse link
G Egfl7 EGF-like-domain, multiple 7 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:9,404,622...9,416,879
Ensembl chr 3:9,407,520...9,416,879
JBrowse link
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 involved_in ISO (PMID:22915762) RGD PMID:22915762 NCBI chr 4:102,805,495...102,866,914
Ensembl chr 4:102,805,510...102,866,911
JBrowse link
G Elk3 ETS transcription factor ELK3 acts_upstream_of_or_within ISO MGI:2182950 (MGI:2675762|PMID:12975317) RGD PMID:12975317 MGI:2675762 NCBI chr 7:27,768,582...27,831,088
Ensembl chr 7:27,768,599...27,804,084
JBrowse link
G Emc10 ER membrane protein complex subunit 10 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:94,980,260...94,988,847
Ensembl chr 1:94,943,587...94,988,847
JBrowse link
G Emcn endomucin involved_in ISS
ISO
GO_REF:0000024
(PMID:11594763)
HGNC-UCL
RGD
PMID:11594763 GO_REF:0000024 NCBI chr 2:225,891,100...225,970,932
Ensembl chr 2:225,891,100...225,970,929
JBrowse link
G Eng endoglin acts_upstream_of_or_within ISO MGI:2177822|MGI:2177823 (MGI:2155227|PMID:10625534), (MGI:2674189|PMID:12941632) RGD PMID:10625534 PMID:12941632 MGI:2155227 MGI:2674189 NCBI chr 3:15,934,566...15,972,618
Ensembl chr 3:15,934,518...15,973,230
JBrowse link
G Enpep glutamyl aminopeptidase involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2182774 (MGI:3032824|PMID:14998491)
Ensembl
RGD
PMID:14998491 GO_REF:0000107 MGI:3032824 NCBI chr 2:217,781,985...217,851,947
Ensembl chr 2:217,782,005...217,851,947
JBrowse link
G Epas1 endothelial PAS domain protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1861921|MGI:2386334|MGI:2663583 (MGI:2181852|PMID:12053176), (MGI:3530393|PMID:15728559), (MGI:3588546|PMID:15851592)
Ensembl
RGD
PMID:12053176 PMID:15728559 PMID:15851592 GO_REF:0000107 MGI:2181852 MGI:3530393 MGI:3588546 NCBI chr 6:7,790,236...7,871,246
Ensembl chr 6:7,790,647...7,871,228
JBrowse link
G Epgn epithelial mitogen involved_in ISO
ISS
(PMID:15611079)
GO_REF:0000024
RGD
HGNC-UCL
PMID:15611079 GO_REF:0000024 NCBI chr14:17,076,774...17,084,806
Ensembl chr14:17,076,774...17,084,806
JBrowse link
G Ephb1 Eph receptor B1 involved_in ISO
ISS
(PMID:9499402)
GO_REF:0000024
RGD
UniProt
PMID:9499402 GO_REF:0000024 NCBI chr 8:102,507,549...102,944,839
Ensembl chr 8:102,507,549...102,944,839
JBrowse link
G Ephb2 Eph receptor B2 involved_in ISO
IBA
(MGI:1331270|PMID:9990854)
PMID:21873635
RGD PMID:9990854 PMID:21873635 MGI:1331270, RGD:13792537 NCBI chr 5:148,889,574...149,077,027
Ensembl chr 5:148,897,246...149,077,059
JBrowse link
G Ephb3 Eph receptor B3 involved_in ISO (MGI:1331270|PMID:9990854) RGD PMID:9990854 MGI:1331270 NCBI chr11:79,840,668...79,859,467
Ensembl chr11:79,840,668...79,859,370
JBrowse link
G Ephb4 EPH receptor B4 involved_in ISO
IBA
(MGI:1345938|PMID:10518221)
PMID:21873635
RGD PMID:10518221 PMID:21873635 MGI:1345938, RGD:13792537 NCBI chr12:19,326,411...19,351,667
Ensembl chr12:19,326,427...19,351,314
JBrowse link
G Ereg epiregulin involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr14:17,027,287...17,041,062
Ensembl chr14:17,027,287...17,041,062
JBrowse link
G Esm1 endothelial cell-specific molecule 1 involved_in IBA
ISO
PMID:21873635
(PMID:11866539)
RGD PMID:11866539 PMID:21873635 RGD:13792537 NCBI chr 2:44,876,067...44,884,805
Ensembl chr 2:44,876,067...44,884,804
JBrowse link
G Fgf1 fibroblast growth factor 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr18:30,686,555...30,772,667
Ensembl chr18:30,686,581...30,772,357
JBrowse link
G Fgf10 fibroblast growth factor 10 IEP RGD PMID:12565793 RGD:727503 NCBI chr 2:50,801,897...50,875,428
Ensembl chr 2:50,800,992...50,876,866
JBrowse link
G Fgf18 fibroblast growth factor 18 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2178751 (MGI:3703411|PMID:17014841)
Ensembl
RGD
PMID:17014841 GO_REF:0000107 MGI:3703411 NCBI chr10:17,706,011...17,737,702
Ensembl chr10:17,706,174...17,736,818
JBrowse link
G Fgf2 fibroblast growth factor 2 acts_upstream_of ISO MGI:97306 (MGI:3629251|PMID:16648142) RGD PMID:16648142 MGI:3629251 NCBI chr 2:120,236,328...120,290,673
Ensembl chr 2:120,236,328...120,291,221
JBrowse link
G Fgf9 fibroblast growth factor 9 acts_upstream_of_or_within ISO MGI:2135961 (MGI:3629544|PMID:16778080), (MGI:3716021|PMID:17544391) RGD PMID:16778080 PMID:17544391 MGI:3629544 MGI:3716021 NCBI chr15:32,208,993...32,254,952
Ensembl chr15:32,210,074...32,253,309
JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 acts_upstream_of_or_within ISO MGI:95523 (MGI:3629544|PMID:16778080) RGD PMID:16778080 MGI:3629544 NCBI chr16:66,492,445...66,546,731
Ensembl chr16:66,494,042...66,547,350
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO MGI:95522 (MGI:3629544|PMID:16778080) RGD PMID:16778080 MGI:3629544 NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626
JBrowse link
G Flna filamin A involved_in ISO (MGI:3699024|PMID:17172441) RGD PMID:17172441 MGI:3699024 NCBI chr  X:152,007,758...152,034,266
Ensembl chr  X:152,007,758...152,031,052
JBrowse link
G Flt1 Fms related receptor tyrosine kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000043
MGI:1857717 (MGI:3045573|PMID:14982871)
UniProt
RGD
PMID:14982871 GO_REF:0000043 MGI:3045573 NCBI chr12:7,296,899...7,468,626
Ensembl chr12:7,297,292...7,468,626
JBrowse link
G Fn1 fibronectin 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:73,196,044...73,264,695
Ensembl chr 9:73,196,044...73,264,678
JBrowse link
G Fzd5 frizzled class receptor 5 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2177951 (MGI:1329850|PMID:11092808)
Ensembl
RGD
PMID:11092808 GO_REF:0000107 MGI:1329850 NCBI chr 9:66,117,370...66,119,127
Ensembl chr 9:66,113,112...66,121,457
JBrowse link
G Fzd8 frizzled class receptor 8 acts_upstream_of_or_within ISO (MGI:3829282|PMID:19129494) RGD PMID:19129494 MGI:3829282 NCBI chr17:57,312,924...57,320,551
Ensembl chr17:57,314,450...57,320,650
JBrowse link
G Gab1 GRB2-associated binding protein 1 involved_in ISO (PMID:17178724) RGD PMID:17178724 NCBI chr19:27,131,262...27,239,236
Ensembl chr19:27,131,262...27,239,236
JBrowse link
G Gata2 GATA binding protein 2 acts_upstream_of ISO MGI:1857743 (MGI:86206|PMID:9043071) RGD PMID:9043071 MGI:86206 NCBI chr 4:120,654,205...120,667,763
Ensembl chr 4:120,658,986...120,667,761
JBrowse link
G Gdf2 growth differentiation factor 2 involved_in ISO (PMID:23972370) RGD PMID:23972370 NCBI chr16:9,255,430...9,261,429
Ensembl chr16:9,255,430...9,261,429
JBrowse link
G Gja5 gap junction protein, alpha 5 involved_in ISO (PMID:11866539) RGD PMID:11866539 NCBI chr 2:184,602,407...184,621,952
Ensembl chr 2:184,564,475...184,621,952
JBrowse link
G Glul glutamate-ammonia ligase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr13:65,969,064...66,035,121
Ensembl chr13:66,025,630...66,035,108
JBrowse link
G Gna13 G protein subunit alpha 13 acts_upstream_of_or_within ISO MGI:2151775 (MGI:1331738|PMID:8999798) RGD PMID:8999798 MGI:1331738 NCBI chr10:94,337,939...94,370,774
Ensembl chr10:94,337,725...94,370,774
JBrowse link
G Gpr15 G protein-coupled receptor 15 involved_in ISO
IEA
(PMID:28386128)
GO_REF:0000107
RGD
Ensembl
PMID:28386128 GO_REF:0000107 NCBI chr11:41,898,356...41,900,441
Ensembl chr11:41,898,356...41,900,441
JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist acts_upstream_of_or_within ISO (MGI:3805145|PMID:18505784) RGD PMID:18505784 MGI:3805145 NCBI chr 3:100,512,317...100,524,001
Ensembl chr 3:100,512,313...100,524,082
JBrowse link
G Hand1 heart and neural crest derivatives expressed 1 acts_upstream_of_or_within ISO MGI:3042297 (MGI:3040527|PMID:15073150) RGD PMID:15073150 MGI:3040527 NCBI chr10:42,006,646...42,009,213
Ensembl chr10:42,006,651...42,009,213
JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr16:32,917,826...32,919,880
Ensembl chr16:32,917,823...32,919,891
JBrowse link
G Hey1 hes-related family bHLH transcription factor with YRPW motif 1 involved_in ISO (PMID:11866539) RGD PMID:11866539 NCBI chr 2:93,096,706...93,100,316
Ensembl chr 2:93,095,498...93,100,312
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2179429|MGI:2386679 (MGI:3039988|PMID:15073147), (MGI:3607736|PMID:14659802)
Ensembl
RGD
PMID:14659802 PMID:15073147 GO_REF:0000107 MGI:3039988 MGI:3607736 NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
JBrowse link
G Hif3a hypoxia inducible factor 3 subunit alpha involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:77,718,110...77,750,448
Ensembl chr 1:77,722,471...77,749,758
JBrowse link
G Hmox1 heme oxygenase 1 IDA RGD PMID:12593860 RGD:1598394 NCBI chr19:13,466,287...13,474,082
Ensembl chr19:13,467,244...13,474,079
JBrowse link
G Hoxa3 homeobox A3 involved_in ISO (PMID:17972163) RGD PMID:17972163 NCBI chr 4:81,269,243...81,313,218
Ensembl chr 4:81,269,243...81,313,218
JBrowse link
G Hoxa7 homeobox A7 involved_in ISO
IEA
(PMID:17972163)
GO_REF:0000107
RGD
Ensembl
PMID:17972163 GO_REF:0000107 NCBI chr 4:81,315,730...81,317,629
Ensembl chr 4:81,314,625...81,317,659
JBrowse link
G Hoxb13 homeo box B13 involved_in ISO (PMID:17972163) RGD PMID:17972163 NCBI chr10:81,160,498...81,162,777
Ensembl chr10:81,160,498...81,162,777
JBrowse link
G Hoxb3 homeo box B3 involved_in ISO (PMID:17972163) RGD PMID:17972163 NCBI chr10:81,258,739...81,314,134
Ensembl chr10:81,299,357...81,313,107
JBrowse link
G Hs6st1 heparan sulfate 6-O-sulfotransferase 1 acts_upstream_of_or_within ISO MGI:3715259 (MGI:3715036|PMID:17405882) RGD PMID:17405882 MGI:3715036 NCBI chr 9:38,283,502...38,322,684
Ensembl chr 9:38,282,395...38,322,683
JBrowse link
G Il15 interleukin 15 TAS RGD PMID:14581351 RGD:1304452 NCBI chr19:25,640,013...25,706,818
Ensembl chr19:25,640,251...25,706,820
JBrowse link
G Il18 interleukin 18 involved_in ISO
ISS
IEA
(PMID:11466388)
GO_REF:0000107
RGD
Ensembl
PMID:11466388 PMID:11466388 GO_REF:0000107, RGD:8553941 NCBI chr 8:50,904,630...50,932,887
Ensembl chr 8:50,906,960...50,932,887
JBrowse link
G Itga2b integrin subunit alpha 2b involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:87,408,532...87,426,055
Ensembl chr10:87,408,536...87,426,168
JBrowse link
G Itga5 integrin subunit alpha 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:134,478,963...134,502,837
Ensembl chr 7:134,478,968...134,502,837
JBrowse link
G Itgav integrin subunit alpha V involved_in IEP
IBA
ISO
PMID:21873635
(PMID:11866539)
RGD PMID:11866539 PMID:12926533 PMID:21873635 RGD:1582460, RGD:13792537 NCBI chr 3:68,838,524...68,926,653
Ensembl chr 3:68,838,189...68,926,639
JBrowse link
G Izumo1 izumo sperm-egg fusion 1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:96,090,817...96,096,893 JBrowse link
G Jam3 junctional adhesion molecule 3 involved_in ISO (PMID:20592283)
(MGI:5009412|PMID:15994945)
RGD PMID:15994945 PMID:20592283 MGI:5009412 NCBI chr 8:25,508,461...25,569,306
Ensembl chr 8:25,507,057...25,569,355
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit acts_upstream_of_or_within IMP
ISO
VEGF-induced corneal neovascularization
(MGI:3654789|PMID:16847049)
RGD PMID:16847049 PMID:15126605 MGI:3654789, RGD:2290550 NCBI chr 5:109,894,175...109,897,268
Ensembl chr 5:109,893,145...109,897,656
JBrowse link
G Kctd10 potassium channel tetramerization domain containing 10 acts_upstream_of_or_within ISO MGI:5751542 (MGI:5691617|PMID:25401743) RGD PMID:25401743 MGI:5691617 NCBI chr12:42,230,159...42,248,792
Ensembl chr12:42,230,269...42,248,783
JBrowse link
G Kdr kinase insert domain receptor involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:32,217,871...32,261,018
Ensembl chr14:32,217,871...32,261,018
JBrowse link
G Klf5 Kruppel-like factor 5 acts_upstream_of_or_within ISO MGI:3038696 (MGI:2183884|PMID:12101409) RGD PMID:12101409 MGI:2183884 NCBI chr15:76,060,320...76,079,445
Ensembl chr15:76,064,258...76,079,445
JBrowse link
G Lemd3 LEM domain containing 3 acts_upstream_of_or_within ISO MGI:3703328 (MGI:3702795|PMID:16943282) RGD PMID:16943282 MGI:3702795 NCBI chr 7:56,415,053...56,499,047
Ensembl chr 7:56,305,448...56,502,474
JBrowse link
G Lep leptin involved_in ISO (PMID:19910644), (PMID:21771332) RGD PMID:19910644 PMID:21771332 NCBI chr 4:57,661,127...57,675,262
Ensembl chr 4:57,661,131...57,675,262
JBrowse link
G Lepr leptin receptor involved_in IMP
ISS
ISO
GO_REF:0000024
(PMID:21771332)
UniProt
RGD
PMID:21771332 PMID:12393625 GO_REF:0000024, RGD:729241 NCBI chr 5:116,294,409...116,477,904
Ensembl chr 5:116,289,823...116,475,908
JBrowse link
G Map3k7 mitogen activated protein kinase kinase kinase 7 acts_upstream_of_or_within ISO MGI:3608889 (MGI:3621089|PMID:16556914) RGD PMID:16556914 MGI:3621089 NCBI chr 5:46,356,973...46,415,597
Ensembl chr 5:46,357,931...46,415,597
JBrowse link
G Mapk14 mitogen activated protein kinase 14 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2177832 (MGI:2155237|PMID:10973481)
Ensembl
RGD
PMID:10973481 GO_REF:0000107 MGI:2155237 NCBI chr20:6,749,646...6,810,590
Ensembl chr20:6,749,670...6,810,589
JBrowse link
G Mcam melanoma cell adhesion molecule acts_upstream_of_or_within
involved_in
ISO
IBA
(PMID:23878390)
PMID:21873635
RGD PMID:23878390 PMID:21873635 RGD:13792537 NCBI chr 8:44,479,391...44,487,575
Ensembl chr 8:44,479,376...44,487,571
JBrowse link
G Med1 mediator complex subunit 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:2158098|PMID:11724781)
UniProt
RGD
PMID:11724781 GO_REF:0000024 MGI:2158098 NCBI chr10:83,145,538...83,189,260
Ensembl chr10:83,145,568...83,189,299
JBrowse link
G Meis1 Meis homeobox 1 acts_upstream_of_or_within ISO MGI:3029063 (MGI:3028436|PMID:14713950) RGD PMID:14713950 MGI:3028436 NCBI chr14:93,155,426...93,294,373
Ensembl chr14:93,155,419...93,294,265
JBrowse link
G Meox2 mesenchyme homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2674242 (MGI:3604838|PMID:16116430)
Ensembl
RGD
PMID:16116430 GO_REF:0000107 MGI:3604838 NCBI chr 6:53,856,760...53,917,467
Ensembl chr 6:53,856,758...53,917,467
JBrowse link
G Mfge8 milk fat globule EGF and factor V/VIII domain containing involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:133,064,665...133,080,069
Ensembl chr 1:133,064,665...133,080,073
JBrowse link
G Mir126b microRNA 126b acts_upstream_of_or_within ISO MGI:109484 (MGI:6109167|PMID:29118970) RGD PMID:29118970 MGI:6109167 NCBI chr 3:9,415,087...9,415,159 JBrowse link
G Mmp14 matrix metallopeptidase 14 IEP RGD PMID:14766216 RGD:1582561 NCBI chr15:27,887,795...27,897,020
Ensembl chr15:27,887,727...27,899,864
JBrowse link
G Mmp2 matrix metallopeptidase 2 IEP RGD PMID:12234794 RGD:625663 NCBI chr19:14,154,657...14,182,870
Ensembl chr19:14,154,657...14,182,870
JBrowse link
G Myh9 myosin, heavy chain 9 involved_in ISO
IEA
ISS
(PMID:16403913)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:16403913 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:109,343,718...109,424,457
Ensembl chr 7:109,343,706...109,424,457
JBrowse link
G Ncl nucleolin involved_in ISO (PMID:16403913) RGD PMID:16403913 NCBI chr 9:86,999,588...87,008,112
Ensembl chr 9:86,998,019...87,008,136
JBrowse link
G Ndnf neuron-derived neurotrophic factor involved_in ISO (PMID:24706764) RGD PMID:24706764 NCBI chr 4:94,944,749...94,987,414
Ensembl chr 4:94,944,360...94,981,873
JBrowse link
G Nf1 neurofibromin 1 acts_upstream_of
involved_in
ISO
IEA
MGI:95516 (MGI:3629251|PMID:16648142)
GO_REF:0000107
RGD
Ensembl
PMID:16648142 GO_REF:0000107 MGI:3629251 NCBI chr10:64,306,027...64,539,112
Ensembl chr10:64,306,301...64,536,658
JBrowse link
G Ninj1 ninjurin 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:15,452,804...15,461,684
Ensembl chr17:15,452,813...15,461,704
JBrowse link
G Nos3 nitric oxide synthase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857229 (MGI:3580728|PMID:15016731)
Ensembl
RGD
PMID:15016731 GO_REF:0000107 MGI:3580728 NCBI chr 4:10,793,834...10,814,170
Ensembl chr 4:10,793,834...10,814,166
JBrowse link
G Nox1 NADPH oxidase 1 involved_in ISO
IEA
(PMID:11805326)
GO_REF:0000107
RGD
Ensembl
PMID:11805326 GO_REF:0000107 NCBI chr  X:97,279,058...97,332,291
Ensembl chr  X:97,279,056...97,302,236
JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 acts_upstream_of
involved_in
ISO
IEA
MGI:2176560 (MGI:3615102|PMID:16424942)
GO_REF:0000107
RGD
Ensembl
PMID:16424942 GO_REF:0000107 MGI:3615102 NCBI chr20:46,050,134...46,070,569
Ensembl chr20:46,050,414...46,073,949
JBrowse link
G Nrcam neuronal cell adhesion molecule involved_in ISO (PMID:11866539) RGD PMID:11866539 NCBI chr 6:61,402,813...61,698,536
Ensembl chr 6:61,329,863...61,702,992
JBrowse link
G Nrp1 neuropilin 1 involved_in
acts_upstream_of_or_within
ISO (PMID:23639442)
MGI:1857853|MGI:2450311|MGI:3512101 (MGI:3505728|PMID:12852851), (MGI:3505797|PMID:15376331)
UniProtKB:O14786 (MGI:5490930|PMID:23639442), (MGI:5562961|PMID:24401374)
RGD PMID:12852851 PMID:15376331 PMID:23639442 PMID:24401374 MGI:3505728 MGI:3505797 MGI:5490930 MGI:5562961 NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
JBrowse link
G Nrp2 neuropilin 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:64,122,815...64,238,007
Ensembl chr 9:64,123,132...64,237,958
JBrowse link
G Nrxn1 neurexin 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 6:3,177,788...4,323,848
Ensembl chr 6:3,177,897...4,322,710
JBrowse link
G Optc opticin acts_upstream_of ISO MGI:5462239 (MGI:5462009|PMID:22159013) RGD PMID:22159013 MGI:5462009 NCBI chr13:45,353,954...45,368,254
Ensembl chr13:45,355,148...45,365,237
JBrowse link
G Ovol2 ovo-like zinc finger 2 acts_upstream_of_or_within ISO MGI:3777011 (MGI:3776202|PMID:17573777) RGD PMID:17573777 MGI:3776202 NCBI chr 3:131,677,388...131,707,844
Ensembl chr 3:131,677,391...131,708,359
JBrowse link
G Pank2 pantothenate kinase 2 involved_in ISO (PMID:30221726) RGD PMID:30221726 NCBI chr 3:118,483,382...118,519,551
Ensembl chr 3:118,483,444...118,518,320
JBrowse link
G Pdcd10 programmed cell death 10 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:160,303,465...160,346,086
Ensembl chr 2:160,303,449...160,346,018
JBrowse link
G Pdcd6 programmed cell death 6 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:28,966,518...28,982,188
Ensembl chr 1:28,966,518...28,982,189
JBrowse link
G Pdcl3 phosducin-like 3 involved_in ISO
IBA
(PMID:26059764)
PMID:21873635
(MGI:6316442|PMID:26059764)
RGD PMID:26059764 PMID:21873635 MGI:6316442, RGD:13792537 NCBI chr 9:41,234,322...41,243,769
Ensembl chr 9:41,234,234...41,243,735
JBrowse link
G Pde3b phosphodiesterase 3B involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:168,606,762...168,770,078
Ensembl chr 1:168,607,022...168,769,334
JBrowse link
G Pdgfa platelet derived growth factor subunit A involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(MGI:2183884|PMID:12101409)
UniProt
RGD
PMID:12101409 GO_REF:0000024 MGI:2183884 NCBI chr12:15,645,549...15,667,056
Ensembl chr12:15,645,541...15,666,497
JBrowse link
G Pdgfrb platelet derived growth factor receptor beta involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:54,500,002...54,538,843
Ensembl chr18:54,499,964...54,538,843
JBrowse link
G Pecam1 platelet and endothelial cell adhesion molecule 1 acts_upstream_of_or_within ISO MGI:2677448 (MGI:3723364|PMID:17563397) RGD PMID:17563397 MGI:3723364 NCBI chr10:91,590,521...91,652,279
Ensembl chr10:91,590,521...91,652,116
JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:115,175,275...115,249,034
Ensembl chr 2:115,174,984...115,249,032
JBrowse link
G Pknox1 PBX/knotted 1 homeobox 1 acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:3530910 (MGI:3653971|PMID:16847320)
PMID:21873635
RGD PMID:16847320 PMID:21873635 MGI:3653971, RGD:13792537 NCBI chr20:9,662,866...9,705,030
Ensembl chr20:9,662,899...9,703,727
JBrowse link
G Plau plasminogen activator, urokinase IMP RGD PMID:15854129 RGD:1581926 NCBI chr15:3,456,230...3,462,732
Ensembl chr15:3,456,232...3,462,775
JBrowse link
G Plcd1 phospholipase C, delta 1 acts_upstream_of_or_within ISO MGI:107451 (MGI:3610693|PMID:16314520) RGD PMID:16314520 MGI:3610693 NCBI chr 8:118,795,196...118,818,186
Ensembl chr 8:118,795,201...118,818,186
JBrowse link
G Plcd3 phospholipase C, delta 3 acts_upstream_of_or_within ISO MGI:97614 (MGI:3610693|PMID:16314520) RGD PMID:16314520 MGI:3610693 NCBI chr10:88,026,707...88,048,080
Ensembl chr10:88,026,740...88,048,296
JBrowse link
G Plxdc1 plexin domain containing 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:82,922,499...82,982,124
Ensembl chr10:82,922,508...82,982,130
JBrowse link
G Plxnd1 plexin D1 involved_in ISO (MGI:3828912|PMID:18992737) RGD PMID:18992737 MGI:3828912 NCBI chr 4:149,002,784...149,043,097
Ensembl chr 4:149,002,784...149,043,244
JBrowse link
G Pnpla6 patatin-like phospholipase domain containing 6 acts_upstream_of_or_within ISO MGI:3028797 (MGI:3027410|PMID:14749382) RGD PMID:14749382 MGI:3027410 NCBI chr12:1,574,387...1,603,735
Ensembl chr12:1,560,363...1,603,734
JBrowse link
G Pofut1 protein O-fucosyltransferase 1 acts_upstream_of_or_within ISO MGI:2662305 (MGI:2660984|PMID:12697902) RGD PMID:12697902 MGI:2660984 NCBI chr 3:141,708,618...141,735,558
Ensembl chr 3:141,708,644...141,734,786
JBrowse link
G Prkca protein kinase C, alpha involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:92,889,390...93,288,013
Ensembl chr10:92,894,012...93,288,012
JBrowse link
G Prkd1 protein kinase D1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 6:67,725,193...68,039,002
Ensembl chr 6:67,725,905...68,039,042
JBrowse link
G Prkd2 protein kinase D2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:77,513,625...77,542,386
Ensembl chr 1:77,513,986...77,542,376
JBrowse link
G Prkx protein kinase, X-linked involved_in ISO (PMID:21684272)
(MGI:5294507|PMID:21684272)
RGD PMID:21684272 MGI:5294507 NCBI chr  X:41,823,349...41,866,844
Ensembl chr  X:41,823,355...41,866,669
JBrowse link
G Prok1 prokineticin 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:194,853,991...194,859,250
Ensembl chr 2:194,853,991...194,859,250
JBrowse link
G Prok2 prokineticin 2 involved_in ISO (PMID:12604792) RGD PMID:12604792 NCBI chr 4:132,346,681...132,361,754
Ensembl chr 4:132,347,103...132,361,385
JBrowse link
G Pten phosphatase and tensin homolog acts_upstream_of_or_within ISO MGI:2136412|MGI:2182005 (MGI:3588627|PMID:16107612) RGD PMID:16107612 MGI:3588627 NCBI chr 1:230,631,303...230,696,754
Ensembl chr 1:230,630,338...230,696,838
JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 IMP RGD PMID:21273371 RGD:5135049 NCBI chr13:62,164,080...62,169,770
Ensembl chr13:62,163,932...62,172,188
JBrowse link
G Ptk2 protein tyrosine kinase 2 involved_in
acts_upstream_of_or_within
IEA
IBA
ISO
GO_REF:0000043
PMID:21873635
MGI:2137691|MGI:3583806 (MGI:3583385|PMID:15967814)
UniProt
RGD
PMID:15967814 PMID:21873635 GO_REF:0000043 MGI:3583385, RGD:13792537 NCBI chr 7:105,126,725...105,331,848
Ensembl chr 7:105,126,728...105,331,783
JBrowse link
G Ptk2b protein tyrosine kinase 2 beta IMP RGD PMID:11739395 RGD:70597 NCBI chr15:40,360,722...40,481,235
Ensembl chr15:40,360,723...40,481,282
JBrowse link
G Ptprb protein tyrosine phosphatase, receptor type, B involved_in IBA
ISO
PMID:21873635
(MGI:3759922|PMID:16514057), (MGI:3760182|PMID:17360632), (MGI:4412431|PMID:19451274)
RGD PMID:16514057 PMID:17360632 PMID:19451274 PMID:21873635 MGI:3759922 MGI:3760182 MGI:4412431, RGD:13792537 NCBI chr 7:51,953,375...52,034,751
Ensembl chr 7:51,930,015...52,034,748
JBrowse link
G Pxdn peroxidasin acts_upstream_of ISO (PMID:29982533) RGD PMID:29982533 NCBI chr 6:46,580,749...46,658,345
Ensembl chr 6:46,580,761...46,658,345
JBrowse link
G Ramp1 receptor activity modifying protein 1 involved_in ISO (PMID:20596610) RGD PMID:20596610 NCBI chr 9:91,765,481...91,816,152
Ensembl chr 9:91,781,285...91,816,151
JBrowse link
G Ramp2 receptor activity modifying protein 2 involved_in ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:20596610)
UniProt
RGD
PMID:20596610 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr10:86,187,366...86,190,692
Ensembl chr10:86,188,812...86,231,829
JBrowse link
G Rapgef3 Rap guanine nucleotide exchange factor 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:128,875,772...128,898,203
Ensembl chr 7:128,875,773...128,898,521
JBrowse link
G Rasip1 Ras interacting protein 1 involved_in ISO (MGI:3844403|PMID:19272373) RGD PMID:19272373 MGI:3844403 NCBI chr 1:96,097,078...96,109,564
Ensembl chr 1:96,091,074...96,109,562
JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region acts_upstream_of_or_within ISO MGI:1857411 (MGI:3056004|PMID:15466160) RGD PMID:15466160 MGI:3056004 NCBI chr14:57,338,493...57,523,330
Ensembl chr14:57,338,507...57,523,353
JBrowse link
G Rhob ras homolog family member B involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 6:31,363,752...31,365,926
Ensembl chr 6:31,363,548...31,366,108
JBrowse link
G Rnf213 ring finger protein 213 involved_in ISO (PMID:26126547), (PMID:26278786)
(MGI:5751632|PMID:26126547)
RGD PMID:26126547 PMID:26278786 MGI:5751632 NCBI chr10:104,656,329...104,755,669
Ensembl chr10:104,656,883...104,757,918
JBrowse link
G Robo4 roundabout guidance receptor 4 involved_in ISO
IEA
UniProtKB:Q71B05 (PMID:15849270)
GO_REF:0000043
RGD
UniProt
PMID:15849270 GO_REF:0000043 NCBI chr 8:37,119,966...37,133,887
Ensembl chr 8:37,119,988...37,132,519
JBrowse link
G Rora RAR-related orphan receptor A involved_in ISO (PMID:18658046) RGD PMID:18658046 NCBI chr 8:69,301,635...70,034,741
Ensembl chr 8:69,301,733...70,025,931
JBrowse link
G Rspo3 R-spondin 3 acts_upstream_of_or_within ISO MGI:5609537 (MGI:5606157|PMID:18842812) RGD PMID:18842812 MGI:5606157 NCBI chr 1:28,283,914...28,368,661
Ensembl chr 1:28,283,914...28,367,061
JBrowse link
G Rtl1 retrotransposon-like 1 acts_upstream_of_or_within ISO MGI:3776873 (MGI:6709275|PMID:28111885) RGD PMID:28111885 MGI:6709275 NCBI chr 6:128,543,904...128,549,384
Ensembl chr 6:128,543,939...128,549,182
JBrowse link
G Rtn4 reticulon 4 acts_upstream_of_or_within ISO MGI:2661228 (MGI:3042512|PMID:15034570) RGD PMID:15034570 MGI:3042512 NCBI chr14:103,450,074...103,497,687
Ensembl chr14:103,449,930...103,497,686
JBrowse link
G S1pr1 sphingosine-1-phosphate receptor 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:3055628|PMID:15371328)
RGD PMID:15371328 PMID:21873635 MGI:3055628, RGD:13792537 NCBI chr 2:203,624,752...203,629,110
Ensembl chr 2:203,621,587...203,629,681
JBrowse link
G Sat1 spermidine/spermine N1-acetyl transferase 1 involved_in ISO (PMID:11866539) RGD PMID:11866539 NCBI chr  X:40,158,354...40,161,641
Ensembl chr  X:40,157,046...40,196,813
JBrowse link
G Scg2 secretogranin II involved_in ISO
IBA
ISS
(PMID:14970115)
(MGI:3688376|PMID:14970115)
PMID:21873635
GO_REF:0000024
RGD
HGNC-UCL
PMID:14970115 PMID:21873635 GO_REF:0000024 MGI:3688376, RGD:13792537 NCBI chr 9:80,803,074...80,808,646
Ensembl chr 9:80,803,075...80,821,097
JBrowse link
G Serpine1 serpin family E member 1 involved_in
acts_upstream_of
IEA
ISO
GO_REF:0000107
(MGI:5634654|PMID:21119013)
(PMID:11866539)
Ensembl
RGD
PMID:11866539 PMID:21119013 GO_REF:0000107 MGI:5634654 NCBI chr12:19,601,272...19,611,657
Ensembl chr12:19,601,272...19,611,657
JBrowse link
G Setd2 SET domain containing 2, histone lysine methyltransferase acts_upstream_of_or_within ISO MGI:4437211 (MGI:4431136|PMID:20133625) RGD PMID:20133625 MGI:4431136 NCBI chr 8:110,511,808...110,597,489
Ensembl chr 8:110,511,772...110,597,489
JBrowse link
G Shc1 SHC adaptor protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2384189 (MGI:1858547|PMID:10809671)
GO_REF:0000002
Ensembl
RGD
InterPro
PMID:10809671 GO_REF:0000002 GO_REF:0000107 MGI:1858547 NCBI chr 2:174,837,937...174,849,538
Ensembl chr 2:174,837,930...174,849,536
JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO MGI:1857796|MGI:95516 (MGI:3629544|PMID:16778080), (MGI:3701403|PMID:17187775) RGD PMID:16778080 PMID:17187775 MGI:3629544 MGI:3701403 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:20620956)
(MGI:5319292|PMID:22315447)
RGD PMID:20620956 PMID:22315447 MGI:5319292 NCBI chr20:25,307,143...25,329,260
Ensembl chr20:25,306,917...25,329,260
JBrowse link
G Sox17 SRY-box transcription factor 17 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:103559 (MGI:3664528|PMID:16895970)
RGD PMID:16895970 PMID:21873635 MGI:3664528, RGD:13792537 NCBI chr 5:15,016,660...15,022,228
Ensembl chr 5:15,016,731...15,022,228
JBrowse link
G Sox18 SRY-box transcription factor 18 involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:16882943)
MGI:107543 (MGI:3664528|PMID:16895970)
PMID:21873635
RGD PMID:16882943 PMID:16895970 PMID:21873635 MGI:3664528, RGD:13792537 NCBI chr 3:168,785,488...168,787,290
Ensembl chr 3:168,785,490...168,787,290
JBrowse link
G Srpk2 SRSF protein kinase 2 involved_in ISO (MGI:5009362|PMID:19906640) RGD PMID:19906640 MGI:5009362 NCBI chr 4:11,464,684...11,655,993
Ensembl chr 4:11,464,674...11,655,990
JBrowse link
G Srpx2 sushi-repeat-containing protein, X-linked 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:97,106,455...97,132,197
Ensembl chr  X:97,106,561...97,132,195
JBrowse link
G Syk spleen associated tyrosine kinase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:12,604,615...12,678,437
Ensembl chr17:12,604,619...12,661,410
JBrowse link
G Tal1 TAL bHLH transcription factor 1, erythroid differentiation factor acts_upstream_of_or_within ISO MGI:1857254|MGI:2450311|MGI:2661471 (MGI:1197163|PMID:9472016), (MGI:3580924|PMID:15677556) RGD PMID:9472016 PMID:15677556 MGI:1197163 MGI:3580924 NCBI chr 5:128,586,776...128,600,976
Ensembl chr 5:128,587,701...128,600,976
JBrowse link
G Tbx1 T-box transcription factor 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:2179136 (MGI:2178739|PMID:11971873)
UniProt
RGD
PMID:11971873 GO_REF:0000024 MGI:2178739 NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380
JBrowse link
G Tbx4 T-box transcription factor 4 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:2663716 (MGI:2660720|PMID:12736212)
RGD PMID:12736212 PMID:21873635 MGI:2660720, RGD:13792537 NCBI chr10:70,730,686...70,760,829
Ensembl chr10:70,731,163...70,760,825
JBrowse link
G Tek TEK receptor tyrosine kinase acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:2159357 (MGI:1315113|PMID:9846489)
PMID:21873635
(MGI:74274|PMID:7596437)
RGD PMID:7596437 PMID:9846489 PMID:21873635 MGI:1315113 MGI:74274, RGD:13792537 NCBI chr 5:109,607,077...109,733,805
Ensembl chr 5:109,607,077...109,733,804
JBrowse link
G Tgfa transforming growth factor alpha acts_upstream_of_or_within ISO (MGI:3032824|PMID:14998491) RGD PMID:14998491 MGI:3032824 NCBI chr 4:118,618,043...118,700,897
Ensembl chr 4:118,618,269...118,700,894
JBrowse link
G Tgfbi transforming growth factor, beta induced involved_in ISO (PMID:11866539) RGD PMID:11866539 NCBI chr17:7,955,603...7,984,903
Ensembl chr17:7,955,603...7,985,240
JBrowse link
G Tgfbr1 transforming growth factor, beta receptor 1 acts_upstream_of_or_within ISO MGI:2388050 (MGI:1933434|PMID:11285230) RGD PMID:11285230 MGI:1933434 NCBI chr 5:61,653,773...61,710,777
Ensembl chr 5:61,653,233...61,710,777
JBrowse link
G Thy1 Thy-1 cell surface antigen involved_in IBA
ISS
ISO
PMID:21873635
GO_REF:0000024
(MGI:3687715|PMID:9576104)
UniProt
RGD
PMID:9576104 PMID:21873635 GO_REF:0000024 MGI:3687715, RGD:13792537 NCBI chr 8:44,389,495...44,394,688
Ensembl chr 8:44,389,513...44,394,659
JBrowse link
G Tmem100 transmembrane protein 100 acts_upstream_of_or_within ISO MGI:5432904|MGI:5432905 (MGI:5432418|PMID:22783020) RGD PMID:22783020 MGI:5432418 NCBI chr10:74,854,779...74,861,147
Ensembl chr10:74,854,468...74,862,941
JBrowse link
G Tspan12 tetraspanin 12 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:50,313,768...50,389,246
Ensembl chr 4:50,313,772...50,389,246
JBrowse link
G Ubp1 upstream binding protein 1 acts_upstream_of_or_within ISO MGI:3052819 (MGI:3052280|PMID:15282311) RGD PMID:15282311 MGI:3052280 NCBI chr 8:113,869,771...113,915,625
Ensembl chr 8:113,869,979...113,915,625
JBrowse link
G Vash1 vasohibin 1 acts_upstream_of_or_within ISO (PMID:15467828) RGD PMID:15467828 NCBI chr 6:106,330,374...106,345,740
Ensembl chr 6:106,329,123...106,345,726
JBrowse link
G Vegfa vascular endothelial growth factor A acts_upstream_of_or_within
involved_in
TAS
ISO
IEA
IMP
(MGI:3758404|PMID:17626017)
MGI:1202890|MGI:1926815|MGI:1931048|MGI:2383985|MGI:2386592|MGI:2386595 (MGI:1351100|PMID:10617467), (MGI:2675762|PMID:12975317), (MGI:2681060|PMID:12890722), (MGI:3027334|PMID:14722611), (MGI:3032824|PMID:14998491), (MGI:3039988|PMID:15073147), (MGI:3629544|PMID:16778080), (MGI:3789854|PMID:17625068)
(PMID:11427521), (PMID:21771332)
GO_REF:0000043
RGD
UniProt
PMID:10617467 PMID:11427521 PMID:12890722 PMID:12975317 PMID:14722611 More... GO_REF:0000043 MGI:1351100 MGI:2675762 MGI:2681060 MGI:3027334 MGI:3032824 MGI:3039988 MGI:3629544 MGI:3758404 MGI:3789854, RGD:625593, RGD:1580552 NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
JBrowse link
G Vegfb vascular endothelial growth factor B IEP RGD PMID:12230324 RGD:1580574 NCBI chr 1:204,172,297...204,178,046
Ensembl chr 1:204,172,225...204,177,944
JBrowse link
G Vegfc vascular endothelial growth factor C IMP RGD PMID:12706123 RGD:1580593 NCBI chr16:37,712,408...37,827,657
Ensembl chr16:37,712,262...37,827,848
JBrowse link
G Vegfd vascular endothelial growth factor D involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:30,073,122...30,108,413
Ensembl chr  X:30,074,163...30,108,295
JBrowse link
G Vezf1 vascular endothelial zinc finger 1 acts_upstream_of_or_within ISO MGI:3583268 (MGI:3581991|PMID:15882861) RGD PMID:15882861 MGI:3581991 NCBI chr10:72,859,669...72,876,111
Ensembl chr10:72,859,877...72,876,111
JBrowse link
G Vhl von Hippel-Lindau tumor suppressor acts_upstream_of_or_within ISO MGI:2136645|MGI:2450311 (MGI:3619780|PMID:16537898) RGD PMID:16537898 MGI:3619780 NCBI chr 4:146,772,483...146,779,376
Ensembl chr 4:146,772,468...146,779,377
JBrowse link
G Wars1 tryptophanyl-tRNA synthetase 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 6:127,776,088...127,807,273
Ensembl chr 6:127,776,090...127,807,269
JBrowse link
G Wasf2 WASP family member 2 acts_upstream_of_or_within ISO MGI:2670134 (MGI:2668788|PMID:12879075) RGD PMID:12879075 MGI:2668788 NCBI chr 5:145,336,816...145,402,041
Ensembl chr 5:145,336,842...145,399,242
JBrowse link
G Wnt7a Wnt family member 7A acts_upstream_of_or_within ISO MGI:98962 (MGI:3829282|PMID:19129494) RGD PMID:19129494 MGI:3829282 NCBI chr 4:123,863,108...123,908,981
Ensembl chr 4:123,863,108...123,908,981
JBrowse link
G Wnt7b Wnt family member 7B acts_upstream_of_or_within ISO MGI:2387443|MGI:98961 (MGI:3829282|PMID:19129494) RGD PMID:19129494 MGI:3829282 NCBI chr 7:116,634,817...116,679,089
Ensembl chr 7:116,634,814...116,679,581
JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5575452|PMID:23529610)
UniProt
RGD
PMID:23529610 GO_REF:0000024 MGI:5575452 NCBI chr14:80,390,629...80,395,713
Ensembl chr14:80,390,643...80,395,693
JBrowse link
G Ywhaz tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:5562755 (MGI:6109167|PMID:29118970)
Ensembl
RGD
PMID:29118970 GO_REF:0000107 MGI:6109167 NCBI chr 7:67,941,353...67,963,651
Ensembl chr 7:67,940,017...67,963,668
JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:137,376,562...137,385,351
Ensembl chr 5:137,376,564...137,385,351
JBrowse link
angiogenesis involved in coronary vascular morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ace angiotensin I converting enzyme IMP RGD PMID:22123369 RGD:6893472 NCBI chr10:90,910,316...90,930,437
Ensembl chr10:90,910,316...90,931,131
JBrowse link
G Fgf2 fibroblast growth factor 2 IMP RGD PMID:11397779 RGD:8655634 NCBI chr 2:120,236,328...120,290,673
Ensembl chr 2:120,236,328...120,291,221
JBrowse link
G Nrp1 neuropilin 1 involved_in ISO (MGI:5562961|PMID:24401374) RGD PMID:24401374 MGI:5562961 NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
JBrowse link
G Tgfbr1 transforming growth factor, beta receptor 1 involved_in ISO (MGI:3820811|PMID:18718461) RGD PMID:18718461 MGI:3820811 NCBI chr 5:61,653,773...61,710,777
Ensembl chr 5:61,653,233...61,710,777
JBrowse link
G Vegfa vascular endothelial growth factor A IMP RGD PMID:11397779 RGD:8655634 NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
JBrowse link
angiogenesis involved in wound healing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4galt1 beta-1,4-galactosyltransferase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2450889 (MGI:3038538|PMID:15039218)
Ensembl
RGD
PMID:15039218 GO_REF:0000107 MGI:3038538 NCBI chr 5:55,935,614...55,982,461
Ensembl chr 5:55,935,615...55,982,461
JBrowse link
G Cx3cl1 C-X3-C motif chemokine ligand 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3608773 (MGI:3772530|PMID:18097059)
Ensembl
RGD
PMID:18097059 GO_REF:0000107 MGI:3772530 NCBI chr19:10,227,337...10,237,826
Ensembl chr19:10,227,340...10,236,833
JBrowse link
G Dag1 dystroglycan 1 IEP RGD PMID:21192954 RGD:11541061 NCBI chr 8:108,890,926...108,955,611
Ensembl chr 8:108,890,929...108,952,325
JBrowse link
G Ets1 ETS proto-oncogene 1, transcription factor IEP RGD PMID:9600079 RGD:2313680 NCBI chr 8:31,045,909...31,168,010
Ensembl chr 8:31,045,945...31,168,010
JBrowse link
G Gpr4 G protein-coupled receptor 4 acts_upstream_of_or_within ISO (MGI:3699048|PMID:17145776) RGD PMID:17145776 MGI:3699048 NCBI chr 1:78,865,376...78,877,126
Ensembl chr 1:78,865,409...78,876,599
JBrowse link
G Gpx1 glutathione peroxidase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2158814 (MGI:3698597|PMID:16373599)
Ensembl
RGD
PMID:16373599 GO_REF:0000107 MGI:3698597 NCBI chr 8:109,026,905...109,028,031
Ensembl chr 8:109,026,905...109,028,024
JBrowse link
G Hpse heparanase involved_in ISO
IBA
(MGI:3574236|PMID:15793281)
PMID:21873635
RGD PMID:15793281 PMID:21873635 MGI:3574236, RGD:13792537 NCBI chr14:8,896,593...8,937,011
Ensembl chr14:8,896,593...8,937,010
JBrowse link
G Mir222 microRNA 222 IMP RGD PMID:27545451 RGD:151893485 NCBI chr  X:3,428,904...3,429,006
Ensembl chr  X:3,428,904...3,429,006
JBrowse link
G Pik3cb phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3795849 (MGI:5604041|PMID:25139353)
Ensembl
RGD
PMID:25139353 GO_REF:0000107 MGI:5604041 NCBI chr 8:99,594,600...99,699,772
Ensembl chr 8:99,594,644...99,699,663
JBrowse link
G Prcp prolylcarboxypeptidase involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:4123993 (MGI:5515692|PMID:23744584)
RGD PMID:23744584 PMID:21873635 MGI:5515692, RGD:13792537 NCBI chr 1:146,931,487...146,983,891
Ensembl chr 1:146,930,561...146,984,530
JBrowse link
G Stard13 StAR-related lipid transfer domain containing 13 NOT|acts_upstream_of_or_within ISO MGI:4363733 (MGI:4887522|PMID:20208559) RGD PMID:20208559 MGI:4887522 NCBI chr12:566,282...959,372
Ensembl chr12:566,310...959,421
JBrowse link
anterior neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casp3 caspase 3 acts_upstream_of_or_within ISO MGI:5056374 (MGI:5050793|PMID:21515572) RGD PMID:21515572 MGI:5050793 NCBI chr16:45,662,910...45,681,171
Ensembl chr16:45,662,910...45,684,648
JBrowse link
G Folr1 folate receptor alpha involved_in ISO (MGI:3721767|PMID:17286298) RGD PMID:17286298 MGI:3721767 NCBI chr 1:156,219,460...156,238,436
Ensembl chr 1:156,219,460...156,230,667
JBrowse link
G Grhl2 grainyhead-like transcription factor 2 acts_upstream_of_or_within ISO MGI:5056365 (MGI:5050793|PMID:21515572) RGD PMID:21515572 MGI:5050793 NCBI chr 7:68,400,287...68,530,269
Ensembl chr 7:68,400,477...68,530,258
JBrowse link
G Specc1l sperm antigen with calponin homology and coiled-coil domains 1-like acts_upstream_of_or_within ISO MGI:4124253|MGI:4128888 (MGI:6101898|PMID:26787558) RGD PMID:26787558 MGI:6101898 NCBI chr20:13,337,983...13,443,665
Ensembl chr20:13,339,692...13,443,665
JBrowse link
anterior neuropore closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gatad2a GATA zinc finger domain containing 2A acts_upstream_of_or_within ISO (MGI:3762244|PMID:17565372) RGD PMID:17565372 MGI:3762244 NCBI chr16:19,429,578...19,520,320
Ensembl chr16:19,429,578...19,519,587
JBrowse link
G Tfap2a transcription factor AP-2 alpha acts_upstream_of_or_within ISO MGI:1888387 (MGI:80520|PMID:8622765) RGD PMID:8622765 MGI:80520 NCBI chr17:24,028,716...24,047,507
Ensembl chr17:24,024,432...24,047,507
JBrowse link
aorta morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts9 ADAM metallopeptidase with thrombospondin type 1 motif, 9 involved_in ISO (MGI:4452308|PMID:20096780) RGD PMID:20096780 MGI:4452308 NCBI chr 4:125,290,633...125,462,988
Ensembl chr 4:125,291,490...125,462,929
JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 acts_upstream_of_or_within ISO MGI:2176467|MGI:4433295 (MGI:5694290|PMID:26102480) RGD PMID:26102480 MGI:5694290 NCBI chr 5:21,812,007...21,995,358
Ensembl chr 5:21,812,070...21,995,358
JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within ISO MGI:102780|MGI:98493|MGI:99604 (MGI:5002778|PMID:21364285) RGD PMID:21364285 MGI:5002778 NCBI chr 5:4,863,501...5,101,483
Ensembl chr 5:4,955,543...5,101,483
JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO MGI:102780|MGI:109344|MGI:98493 (MGI:5002778|PMID:21364285) RGD PMID:21364285 MGI:5002778 NCBI chr 1:244,584,477...244,590,359
Ensembl chr 1:244,584,652...244,590,359
JBrowse link
G Fkbp10 FKBP prolyl isomerase 10 acts_upstream_of_or_within ISO MGI:5432211 (MGI:5585367|PMID:24777781) RGD PMID:24777781 MGI:5585367 NCBI chr10:85,345,434...85,357,998
Ensembl chr10:85,346,126...85,427,330
JBrowse link
G Foxh1 forkhead box H1 involved_in ISO (MGI:3055632|PMID:15363409) RGD PMID:15363409 MGI:3055632 NCBI chr 7:108,387,969...108,391,566
Ensembl chr 7:108,387,969...108,390,049
JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in ISO (MGI:4453944|PMID:20122914) RGD PMID:20122914 MGI:4453944 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
JBrowse link
G Jag1 jagged canonical Notch ligand 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:4359139|PMID:19509466)
Ensembl
RGD
PMID:19509466 GO_REF:0000107 MGI:4359139 NCBI chr 3:124,406,794...124,442,220
Ensembl chr 3:124,406,794...124,442,209
JBrowse link
G Kat6a lysine acetyltransferase 6A acts_upstream_of_or_within ISO MGI:4418468|MGI:98493 (MGI:5442217|PMID:22921202) RGD PMID:22921202 MGI:5442217 NCBI chr16:69,084,914...69,165,923
Ensembl chr16:69,084,914...69,163,606
JBrowse link
G Lrp1 LDL receptor related protein 1 involved_in ISO (MGI:4365879|PMID:19742316) RGD PMID:19742316 MGI:4365879 NCBI chr 7:63,380,325...63,461,029
Ensembl chr 7:63,380,356...63,460,910
JBrowse link
G Nprl3 NPR3-like, GATOR1 complex subunit acts_upstream_of_or_within ISO MGI:5426855 (MGI:5319707|PMID:22538705) RGD PMID:22538705 MGI:5319707 NCBI chr10:15,355,361...15,395,812
Ensembl chr10:15,355,355...15,395,810
JBrowse link
G Pdgfrb platelet derived growth factor receptor beta involved_in ISO UniProtKB:Q91ZX7 (MGI:4365879|PMID:19742316) RGD PMID:19742316 MGI:4365879 NCBI chr18:54,500,002...54,538,843
Ensembl chr18:54,499,964...54,538,843
JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component acts_upstream_of_or_within ISO MGI:4440621 (MGI:4439427|PMID:20215345) RGD PMID:20215345 MGI:4439427 NCBI chr 2:218,562,670...218,632,753
Ensembl chr 2:218,562,676...218,632,699
JBrowse link
G Six1 SIX homeobox 1 acts_upstream_of_or_within ISO MGI:109344|MGI:98493|MGI:99604 (MGI:5002778|PMID:21364285) RGD PMID:21364285 MGI:5002778 NCBI chr 6:91,746,739...91,751,975
Ensembl chr 6:91,746,739...91,751,975
JBrowse link
G Tbx1 T-box transcription factor 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:102780|MGI:109344|MGI:3664784|MGI:99604 (MGI:3770747|PMID:17916582), (MGI:5002778|PMID:21364285)
UniProt
RGD
PMID:17916582 PMID:21364285 GO_REF:0000024 MGI:3770747 MGI:5002778 NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380
JBrowse link
G Tbx2 T-box transcription factor 2 involved_in ISO (MGI:3487212|PMID:15459098) RGD PMID:15459098 MGI:3487212 NCBI chr10:70,679,670...70,688,868
Ensembl chr10:70,679,518...70,688,529
JBrowse link
G Tfap2b transcription factor AP-2 beta involved_in ISS
ISO
GO_REF:0000024
(MGI:5287515|PMID:21829553)
UniProt
RGD
PMID:21829553 GO_REF:0000024 MGI:5287515 NCBI chr 9:21,786,250...21,815,785
Ensembl chr 9:21,786,258...21,814,520
JBrowse link
aorta smooth muscle tissue morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col3a1 collagen type III alpha 1 chain involved_in ISO (MGI:5307011|PMID:21071432) RGD PMID:21071432 MGI:5307011 NCBI chr 9:47,374,611...47,410,547
Ensembl chr 9:47,374,593...47,410,547
JBrowse link
G Efemp2 EGF containing fibulin extracellular matrix protein 2 involved_in ISO (MGI:5660411|PMID:26178373), (MGI:6158865|PMID:26711913) RGD PMID:26178373 PMID:26711913 MGI:5660411 MGI:6158865 NCBI chr 1:202,781,692...202,789,784
Ensembl chr 1:202,781,665...202,789,414
JBrowse link
G Mir143 microRNA 143 acts_upstream_of_or_within ISO MGI:2676830 (MGI:4443305|PMID:19816508) RGD PMID:19816508 MGI:4443305 NCBI chr18:55,101,006...55,101,110
Ensembl chr18:55,101,006...55,101,110
JBrowse link
G Mir145 microRNA 145 acts_upstream_of_or_within ISO MGI:2676828 (MGI:4443305|PMID:19816508) RGD PMID:19816508 MGI:4443305 NCBI chr18:55,099,640...55,099,727
Ensembl chr18:55,099,640...55,099,727
JBrowse link
G Mylk myosin light chain kinase involved_in ISO (PMID:21055718) RGD PMID:21055718 NCBI chr11:65,783,008...66,030,239
Ensembl chr11:65,783,008...66,030,261
JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (MGI:3830437|PMID:19091769) RGD PMID:19091769 MGI:3830437 NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183
JBrowse link
apoptotic process involved in blood vessel morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bak1 BCL2-antagonist/killer 1 acts_upstream_of_or_within ISO MGI:99702 (MGI:3692135|PMID:15955981) RGD PMID:15955981 MGI:3692135 NCBI chr20:5,100,480...5,109,669
Ensembl chr20:5,100,480...5,109,264
JBrowse link
G Bax BCL2 associated X, apoptosis regulator acts_upstream_of_or_within ISO MGI:1097161 (MGI:3692135|PMID:15955981) RGD PMID:15955981 MGI:3692135 NCBI chr 1:95,940,001...95,945,407
Ensembl chr 1:95,938,808...95,945,368
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within ISO MGI:1926601 (MGI:3604165|PMID:16163358) RGD PMID:16163358 MGI:3604165 NCBI chr 2:219,666,549...219,779,815
Ensembl chr 2:219,666,592...219,779,794
JBrowse link
G Lrp5 LDL receptor related protein 5 acts_upstream_of_or_within ISO MGI:2183279 (MGI:3604165|PMID:16163358) RGD PMID:16163358 MGI:3604165 NCBI chr 1:200,814,247...200,917,581
Ensembl chr 1:200,814,250...200,917,581
JBrowse link
G Spi1 Spi-1 proto-oncogene acts_upstream_of_or_within ISO MGI:1927876 (MGI:3604165|PMID:16163358) RGD PMID:16163358 MGI:3604165 NCBI chr 3:77,059,744...77,093,730
Ensembl chr 3:77,073,012...77,092,393
JBrowse link
G Wnt7b Wnt family member 7B acts_upstream_of_or_within ISO MGI:3793960 (MGI:3604165|PMID:16163358) RGD PMID:16163358 MGI:3604165 NCBI chr 7:116,634,817...116,679,089
Ensembl chr 7:116,634,814...116,679,581
JBrowse link
artery morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Angptl3 angiopoietin-like 3 involved_in ISO (MGI:2664626|PMID:12671033) RGD PMID:12671033 MGI:2664626 NCBI chr 5:113,703,007...113,710,044
Ensembl chr 5:113,703,012...113,709,957
JBrowse link
G Apob apolipoprotein B acts_upstream_of_or_within ISO MGI:88057 (MGI:3695082|PMID:16230502) RGD PMID:16230502 MGI:3695082 NCBI chr 6:30,844,386...30,883,983
Ensembl chr 6:30,844,368...30,892,497
JBrowse link
G Apoe apolipoprotein E acts_upstream_of_or_within ISO MGI:88052 (MGI:3695082|PMID:16230502) RGD PMID:16230502 MGI:3695082 NCBI chr 1:79,353,924...79,357,852
Ensembl chr 1:79,353,916...79,357,932
JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 acts_upstream_of_or_within ISO MGI:98493 (MGI:4397600|PMID:19855134) RGD PMID:19855134 MGI:4397600 NCBI chr 5:21,812,007...21,995,358
Ensembl chr 5:21,812,070...21,995,358
JBrowse link
G Chrd chordin involved_in ISO MGI:2157350 (MGI:3721005|PMID:17685487) RGD PMID:17685487 MGI:3721005 NCBI chr11:80,171,994...80,181,166
Ensembl chr11:80,171,994...80,180,673
JBrowse link
G Comp cartilage oligomeric matrix protein involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:6100855|PMID:27151399)
Ensembl
RGD
PMID:27151399 GO_REF:0000107 MGI:6100855 NCBI chr16:19,047,206...19,055,584
Ensembl chr16:19,047,207...19,055,845
JBrowse link
G Eng endoglin involved_in ISO (MGI:1337912|PMID:10348742) RGD PMID:10348742 MGI:1337912 NCBI chr 3:15,934,566...15,972,618
Ensembl chr 3:15,934,518...15,973,230
JBrowse link
G Foxc1 forkhead box C1 acts_upstream_of_or_within ISO MGI:1857869 (MGI:1345536|PMID:10479458) RGD PMID:10479458 MGI:1345536 NCBI chr17:32,631,379...32,635,361
Ensembl chr17:32,633,142...32,634,803
JBrowse link
G Foxc2 forkhead box C2 acts_upstream_of_or_within ISO MGI:1857740|MGI:1857865 (MGI:1339313|PMID:9409679), (MGI:1345536|PMID:10479458) RGD PMID:9409679 PMID:10479458 MGI:1339313 MGI:1345536 NCBI chr19:49,186,034...49,188,736
Ensembl chr19:49,185,662...49,188,737
JBrowse link
G Gja5 gap junction protein, alpha 5 involved_in ISO (MGI:4462093|PMID:20530546) RGD PMID:20530546 MGI:4462093 NCBI chr 2:184,602,407...184,621,952
Ensembl chr 2:184,564,475...184,621,952
JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in ISO (MGI:4453944|PMID:20122914) RGD PMID:20122914 MGI:4453944 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
JBrowse link
G Hoxa1 homeobox A1 involved_in ISO (PMID:16155570) RGD PMID:16155570 NCBI chr 4:81,255,814...81,258,504
Ensembl chr 4:81,255,883...81,258,504
JBrowse link
G Hoxa13 homeo box A13 acts_upstream_of_or_within ISO MGI:2152356 (MGI:3797428|PMID:18483557) RGD PMID:18483557 MGI:3797428 NCBI chr 4:81,358,956...81,361,091
Ensembl chr 4:81,358,956...81,361,091
JBrowse link
G Ldlr low density lipoprotein receptor involved_in ISO (MGI:5581894|PMID:22927332) RGD PMID:22927332 MGI:5581894 NCBI chr 8:20,270,020...20,292,981
Ensembl chr 8:20,270,041...20,294,580
JBrowse link
G Nf1 neurofibromin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
ISS
GO_REF:0000107
MGI:1857444 (MGI:66069|PMID:7926784)
GO_REF:0000024
Ensembl
RGD
HGNC-UCL
PMID:7926784 GO_REF:0000024 GO_REF:0000107 MGI:66069 NCBI chr10:64,306,027...64,539,112
Ensembl chr10:64,306,301...64,536,658
JBrowse link
G Notch3 notch receptor 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2687010 (MGI:5609934|PMID:23117660)
Ensembl
RGD
PMID:23117660 GO_REF:0000107 MGI:5609934 NCBI chr 7:11,132,984...11,184,025
Ensembl chr 7:11,133,706...11,184,025
JBrowse link
G Nrp1 neuropilin 1 involved_in ISO (MGI:5490930|PMID:23639442), (MGI:5562961|PMID:24401374) RGD PMID:23639442 PMID:24401374 MGI:5490930 MGI:5562961 NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
JBrowse link
G Prdm1 PR/SET domain 1 acts_upstream_of_or_within ISO MGI:3605483|MGI:3605621|MGI:98493 (MGI:5585355|PMID:24821700) RGD PMID:24821700 MGI:5585355 NCBI chr20:47,959,858...47,981,488
Ensembl chr20:47,959,858...47,981,488
JBrowse link
G Prrx1 paired related homeobox 1 acts_upstream_of_or_within ISO MGI:1857640|MGI:98218 (MGI:1353388|PMID:10664157) RGD PMID:10664157 MGI:1353388 NCBI chr13:75,600,777...75,671,896
Ensembl chr13:75,601,706...75,670,866
JBrowse link
G Prrx2 paired related homeobox 2 acts_upstream_of_or_within ISO MGI:97712 (MGI:1353388|PMID:10664157) RGD PMID:10664157 MGI:1353388 NCBI chr 3:14,132,511...14,168,535
Ensembl chr 3:14,094,004...14,168,535
JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region acts_upstream_of_or_within ISO MGI:3583755 (MGI:5609934|PMID:23117660) RGD PMID:23117660 MGI:5609934 NCBI chr14:57,338,493...57,523,330
Ensembl chr14:57,338,507...57,523,353
JBrowse link
G Smad7 SMAD family member 7 involved_in IEA
ISO
GO_REF:0000107
(MGI:3836072|PMID:18952608)
Ensembl
RGD
PMID:18952608 GO_REF:0000107 MGI:3836072 NCBI chr18:68,988,429...69,016,774
Ensembl chr18:68,988,429...69,016,765
JBrowse link
G Stra6 signaling receptor and transporter of retinol STRA6 involved_in ISO (PMID:17273977) RGD PMID:17273977 NCBI chr 8:58,549,743...58,568,861
Ensembl chr 8:58,549,736...58,568,860
JBrowse link
G Tbx1 T-box transcription factor 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:2179190|MGI:2444748|MGI:95668|MGI:99655 (MGI:2138050|PMID:11242110), (MGI:4358009|PMID:19700621), (MGI:4397600|PMID:19855134), (MGI:5585355|PMID:24821700)
UniProt
RGD
PMID:11242110 PMID:19700621 PMID:19855134 PMID:24821700 GO_REF:0000024 MGI:2138050 MGI:4358009 MGI:4397600 MGI:5585355 NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380
JBrowse link
G Tgfbr1 transforming growth factor, beta receptor 1 acts_upstream_of_or_within ISO MGI:2386570|MGI:2388050 (MGI:3703113|PMID:17078885) RGD PMID:17078885 MGI:3703113 NCBI chr 5:61,653,773...61,710,777
Ensembl chr 5:61,653,233...61,710,777
JBrowse link
G Vegfa vascular endothelial growth factor A acts_upstream_of_or_within ISO MGI:1931047 (MGI:1339868|PMID:10229225) RGD PMID:10229225 MGI:1339868 NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
JBrowse link
G Wnt11 Wnt family member 11 acts_upstream_of_or_within ISO MGI:2665014 (MGI:3759355|PMID:17767158) RGD PMID:17767158 MGI:3759355 NCBI chr 1:153,134,503...153,154,294
Ensembl chr 1:153,138,197...153,154,294
JBrowse link
G Zmiz1 zinc finger, MIZ-type containing 1 acts_upstream_of_or_within ISO MGI:3769389 (MGI:3768282|PMID:17967885) RGD PMID:17967885 MGI:3768282 NCBI chr16:1,027,083...1,232,616
Ensembl chr16:1,027,325...1,232,597
JBrowse link
ascending aorta morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hes1 hes family bHLH transcription factor 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:4354447|PMID:19609448)
Ensembl
RGD
PMID:19609448 GO_REF:0000107 MGI:4354447 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
JBrowse link
G Hey2 hes-related family bHLH transcription factor with YRPW motif 2 involved_in ISO (MGI:2386835|PMID:12372254) RGD PMID:12372254 MGI:2386835 NCBI chr 1:26,822,131...26,832,218
Ensembl chr 1:26,822,131...26,832,218
JBrowse link
G Sox4 SRY-box transcription factor 4 involved_in ISO (MGI:3603061|PMID:16109771) RGD PMID:16109771 MGI:3603061 NCBI chr17:35,667,809...35,672,515
Ensembl chr17:35,667,537...35,673,665
JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in ISO (MGI:894212|PMID:9217007) RGD PMID:9217007 MGI:894212 NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405
JBrowse link
blood vessel endothelial cell migration involved in intussusceptive angiogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lemd3 LEM domain containing 3 acts_upstream_of_or_within ISO MGI:3703328 (MGI:3702795|PMID:16943282) RGD PMID:16943282 MGI:3702795 NCBI chr 7:56,415,053...56,499,047
Ensembl chr 7:56,305,448...56,502,474
JBrowse link
blood vessel endothelial cell proliferation involved in sprouting angiogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:18787191)
UniProt
Ensembl
RGD
PMID:18787191 GO_REF:0000024 GO_REF:0000107 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
JBrowse link
G Bmper BMP-binding endothelial regulator involved_in ISO (PMID:18787191) RGD PMID:18787191 NCBI chr 8:21,732,225...21,977,261
Ensembl chr 8:21,732,225...21,977,256
JBrowse link
G Epha2 Eph receptor A2 acts_upstream_of_or_within ISO MGI:3040415 (MGI:3847147|PMID:19443703) RGD PMID:19443703 MGI:3847147 NCBI chr 5:153,605,644...153,634,115
Ensembl chr 5:153,605,644...153,634,117
JBrowse link
G Itgb1bp1 integrin subunit beta 1 binding protein 1 involved_in ISO (PMID:20616313) RGD PMID:20616313 NCBI chr 6:40,820,693...40,836,074
Ensembl chr 6:40,821,339...40,836,037
JBrowse link
G Nrarp Notch-regulated ankyrin repeat protein involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:3833551 (MGI:3833040|PMID:19154719)
RGD PMID:19154719 PMID:21873635 MGI:3833040, RGD:13792537 NCBI chr 3:7,992,582...7,995,136
Ensembl chr 3:7,992,552...7,995,133
JBrowse link
G Sema5a semaphorin 5A involved_in ISS
ISO
GO_REF:0000024
(MGI:5526935|PMID:19850054)
UniProt
RGD
PMID:19850054 GO_REF:0000024 MGI:5526935 NCBI chr 2:83,309,843...83,741,084
Ensembl chr 2:83,309,843...83,741,084
JBrowse link
blood vessel lumenization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll4 delta like canonical Notch ligand 4 involved_in ISO (MGI:3056004|PMID:15466160) RGD PMID:15466160 MGI:3056004 NCBI chr 3:106,317,114...106,327,004
Ensembl chr 3:106,316,986...106,326,931
JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region involved_in ISO (MGI:3056004|PMID:15466160) RGD PMID:15466160 MGI:3056004 NCBI chr14:57,338,493...57,523,330
Ensembl chr14:57,338,507...57,523,353
JBrowse link
blood vessel morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvrl1 activin A receptor like type 1 acts_upstream_of_or_within ISO MGI:2680088 (MGI:3715670|PMID:17530030), (MGI:3770582|PMID:17911384) RGD PMID:17530030 PMID:17911384 MGI:3715670 MGI:3770582 NCBI chr 7:132,239,200...132,256,592
Ensembl chr 7:132,239,729...132,256,591
JBrowse link
G Ahr aryl hydrocarbon receptor involved_in ISO (MGI:1889403|PMID:10973493) RGD PMID:10973493 MGI:1889403 NCBI chr 6:52,234,089...52,271,568
Ensembl chr 6:52,234,089...52,271,568
JBrowse link
G Aimp1 aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 IEP RGD PMID:14732363 RGD:1580021 NCBI chr 2:221,151,907...221,175,458
Ensembl chr 2:221,151,904...221,175,728
JBrowse link
G Amot angiomotin acts_upstream_of_or_within ISO MGI:2656627 (MGI:3719955|PMID:17699752) RGD PMID:17699752 MGI:3719955 NCBI chr  X:108,982,399...109,041,265
Ensembl chr  X:108,984,022...109,041,272
JBrowse link
G Angpt2 angiopoietin 2 acts_upstream_of_or_within ISO MGI:3040929 (MGI:3522390|PMID:15579434) RGD PMID:15579434 MGI:3522390 NCBI chr16:71,088,364...71,138,805
Ensembl chr16:71,088,364...71,138,804
JBrowse link
G Cdh2 cadherin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
GO_REF:0000107
MGI:3522469 (MGI:3578460|PMID:15809310)
PMID:21873635
Ensembl
RGD
PMID:15809310 PMID:21873635 GO_REF:0000107 MGI:3578460, RGD:13792537 NCBI chr18:7,776,704...7,990,934
Ensembl chr18:7,776,704...7,990,167
JBrowse link
G Col4a1 collagen type IV alpha 1 chain involved_in ISO (PMID:20818663) RGD PMID:20818663 NCBI chr16:78,183,533...78,294,412
Ensembl chr16:78,183,533...78,294,412
JBrowse link
G Cyp1b1 cytochrome P450, family 1, subfamily b, polypeptide 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5492227|PMID:23568032)
UniProt
RGD
PMID:23568032 GO_REF:0000024 MGI:5492227 NCBI chr 6:15,342,312...15,350,886
Ensembl chr 6:15,342,344...15,350,917
JBrowse link
G Edn1 endothelin 1 acts_upstream_of_or_within ISO MGI:1857637 (MGI:74210|PMID:7615798) RGD PMID:7615798 MGI:74210 NCBI chr17:22,454,924...22,460,812
Ensembl chr17:22,454,420...22,460,885
JBrowse link
G Efnb2 ephrin B2 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:3051214|MGI:3051215 (MGI:4429786|PMID:19571816)
RGD PMID:19571816 PMID:21873635 MGI:4429786, RGD:13792537 NCBI chr16:80,783,389...80,827,420
Ensembl chr16:80,783,417...80,824,391
JBrowse link
G Epha2 Eph receptor A2 acts_upstream_of_or_within ISO MGI:3040415 (MGI:3847147|PMID:19443703) RGD PMID:19443703 MGI:3847147 NCBI chr 5:153,605,644...153,634,115
Ensembl chr 5:153,605,644...153,634,117
JBrowse link
G Etv2 ETS variant transcription factor 2 acts_upstream_of_or_within ISO MGI:4415819 (MGI:4415813|PMID:18462699) RGD PMID:18462699 MGI:4415813 NCBI chr 1:85,890,562...85,894,025
Ensembl chr 1:85,890,559...85,893,431
JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within ISO MGI:3629660 (MGI:3716020|PMID:17560563) RGD PMID:17560563 MGI:3716020 NCBI chr 2:50,801,897...50,875,428
Ensembl chr 2:50,800,992...50,876,866
JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 acts_upstream_of_or_within ISO MGI:1857123 (MGI:3608763|PMID:10373225) RGD PMID:10373225 MGI:3608763 NCBI chr16:66,492,445...66,546,731
Ensembl chr16:66,494,042...66,547,350
JBrowse link
G Flt1 Fms related receptor tyrosine kinase 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:74275|PMID:7596436)
UniProt
RGD
PMID:7596436 GO_REF:0000024 MGI:74275 NCBI chr12:7,296,899...7,468,626
Ensembl chr12:7,297,292...7,468,626
JBrowse link
G Flt4 Fms related receptor tyrosine kinase 4 involved_in ISS
ISO
GO_REF:0000024
(MGI:1309699|PMID:9794766)
UniProt
RGD
PMID:9794766 GO_REF:0000024 MGI:1309699 NCBI chr10:33,913,725...33,954,770
Ensembl chr10:33,913,608...33,954,770
JBrowse link
G Foxn1 forkhead box N1 involved_in ISO (MGI:4413531|PMID:19853842) RGD PMID:19853842 MGI:4413531 NCBI chr10:63,251,400...63,273,710
Ensembl chr10:63,251,400...63,273,710
JBrowse link
G Gdf2 growth differentiation factor 2 involved_in ISO (PMID:20406889) RGD PMID:20406889 NCBI chr16:9,255,430...9,261,429
Ensembl chr16:9,255,430...9,261,429
JBrowse link
G Gja1 gap junction protein, alpha 1 acts_upstream_of_or_within ISO MGI:2386570|MGI:3051881 (MGI:3624198|PMID:16624854) RGD PMID:16624854 MGI:3624198 NCBI chr20:35,756,007...35,768,481
Ensembl chr20:35,755,991...35,768,582
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha acts_upstream_of_or_within ISO MGI:2385358 (MGI:1261710|PMID:9606183) RGD PMID:9606183 MGI:1261710 NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
JBrowse link
G Itga7 integrin subunit alpha 7 acts_upstream_of_or_within ISO MGI:3512077 (MGI:3587516|PMID:16003770) RGD PMID:16003770 MGI:3587516 NCBI chr 7:1,360,125...1,388,886
Ensembl chr 7:1,359,940...1,388,450
JBrowse link
G Lama1 laminin subunit alpha 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:107,692,770...107,816,847
Ensembl chr 9:107,692,770...107,817,478
JBrowse link
G Lox lysyl oxidase involved_in ISS
ISO
GO_REF:0000024
(MGI:5816638|PMID:27432961)
UniProt
RGD
PMID:27432961 GO_REF:0000024 MGI:5816638 NCBI chr18:45,964,311...46,041,477
Ensembl chr18:45,967,343...46,041,477
JBrowse link
G Meis1 Meis homeobox 1 acts_upstream_of_or_within ISO MGI:3578637 (MGI:3577821|PMID:15882575) RGD PMID:15882575 MGI:3577821 NCBI chr14:93,155,426...93,294,373
Ensembl chr14:93,155,419...93,294,265
JBrowse link
G Mrtfb myocardin related transcription factor B acts_upstream_of_or_within ISO MGI:3608959 (MGI:3607644|PMID:16204380) RGD PMID:16204380 MGI:3607644 NCBI chr10:1,116,315...1,278,106
Ensembl chr10:1,116,310...1,277,897
JBrowse link
G Nedd4 NEDD4 E3 ubiquitin protein ligase acts_upstream_of_or_within ISO MGI:3799317|MGI:98737 (MGI:4452597|PMID:20026598) RGD PMID:20026598 MGI:4452597 NCBI chr 8:73,384,095...73,468,951
Ensembl chr 8:73,383,695...73,468,951
JBrowse link
G Nr2f2 nuclear receptor subfamily 2, group F, member 2 acts_upstream_of_or_within ISO MGI:3579116 (MGI:3577693|PMID:15875024) RGD PMID:15875024 MGI:3577693 NCBI chr 1:124,008,282...124,022,521
Ensembl chr 1:124,009,181...124,022,031
JBrowse link
G Pdgfb platelet derived growth factor subunit B acts_upstream_of_or_within ISO MGI:98294 (MGI:3590010|PMID:15919073) RGD PMID:15919073 MGI:3590010 NCBI chr 7:111,539,444...111,557,984
Ensembl chr 7:111,540,345...111,557,984
JBrowse link
G Rasa1 RAS p21 protein activator 1 involved_in ISO
IEA
(PMID:23687085)
GO_REF:0000107
RGD
Ensembl
PMID:23687085 GO_REF:0000107 NCBI chr 2:15,857,704...15,940,757
Ensembl chr 2:15,857,980...15,940,854
JBrowse link
G Serpinf2 serpin family F member 2 involved_in ISO (MGI:4453296|PMID:18436805) RGD PMID:18436805 MGI:4453296 NCBI chr10:60,272,400...60,280,506
Ensembl chr10:60,272,400...60,281,243
JBrowse link
G Shb SH2 domain containing adaptor protein B acts_upstream_of_or_within ISO MGI:103178|MGI:97528 (MGI:3590010|PMID:15919073) RGD PMID:15919073 MGI:3590010 NCBI chr 5:59,678,066...59,785,443
Ensembl chr 5:59,678,216...59,785,538
JBrowse link
G Slc1a1 solute carrier family 1 member 1 acts_upstream_of_or_within ISO (MGI:6393184|PMID:25350110) RGD PMID:25350110 MGI:6393184 NCBI chr 1:226,549,932...226,631,925
Ensembl chr 1:226,549,842...226,630,402
JBrowse link
G Sos1 SOS Ras/Rac guanine nucleotide exchange factor 1 acts_upstream_of_or_within ISO MGI:2155441 (MGI:85697|PMID:9030684) RGD PMID:9030684 MGI:85697 NCBI chr 6:14,533,870...14,613,348
Ensembl chr 6:14,533,360...14,611,107
JBrowse link
G Syk spleen associated tyrosine kinase involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:3653293|PMID:12522250)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:12522250 GO_REF:0000024 GO_REF:0000107 MGI:3653293 NCBI chr17:12,604,615...12,678,437
Ensembl chr17:12,604,619...12,661,410
JBrowse link
G Tbx1 T-box transcription factor 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:2179191 (MGI:1931408|PMID:11239417)
UniProt
RGD
PMID:11239417 GO_REF:0000024 MGI:1931408 NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380
JBrowse link
G Thbs1 thrombospondin 1 acts_upstream_of_or_within ISO MGI:97297 (MGI:4452597|PMID:20026598) RGD PMID:20026598 MGI:4452597 NCBI chr 3:105,056,286...105,071,445
Ensembl chr 3:105,056,292...105,071,440
JBrowse link
G Vegfa vascular endothelial growth factor A acts_upstream_of_or_within ISO MGI:98294 (MGI:3588019|PMID:16027358), (MGI:3590010|PMID:15919073) RGD PMID:15919073 PMID:16027358 MGI:3588019 MGI:3590010 NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
JBrowse link
BMP signaling pathway involved in nephric duct formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in ISO
IEA
ISS
(PMID:10021330)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:10021330 GO_REF:0000024 GO_REF:0000107 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
JBrowse link
BMP signaling pathway involved in ureter morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:3710018|PMID:17442697)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:17442697 GO_REF:0000024 GO_REF:0000107 MGI:3710018 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
JBrowse link
branch elongation involved in mammary gland duct branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tgfb1 transforming growth factor, beta 1 acts_upstream_of_or_within ISO MGI:1857258 (MGI:3814777|PMID:18614704) RGD PMID:18614704 MGI:3814777 NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
JBrowse link
branch elongation involved in ureteric bud branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf1 fibroblast growth factor 1 involved_in ISO
ISS
(PMID:11731227)
GO_REF:0000024
RGD
UniProt
PMID:11731227 GO_REF:0000024 NCBI chr18:30,686,555...30,772,667
Ensembl chr18:30,686,581...30,772,357
JBrowse link
branching involved in blood vessel morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 acts_upstream_of_or_within ISO MGI:2386570|MGI:2651395 (MGI:3703113|PMID:17078885) RGD PMID:17078885 MGI:3703113 NCBI chr 3:42,978,558...43,097,892
Ensembl chr 3:42,978,561...43,098,241
JBrowse link
G Ahr aryl hydrocarbon receptor involved_in ISO (MGI:1889403|PMID:10973493) RGD PMID:10973493 MGI:1889403 NCBI chr 6:52,234,089...52,271,568
Ensembl chr 6:52,234,089...52,271,568
JBrowse link
G Col4a1 collagen type IV alpha 1 chain involved_in ISO (PMID:20818663) RGD PMID:20818663 NCBI chr16:78,183,533...78,294,412
Ensembl chr16:78,183,533...78,294,412
JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within
involved_in
ISO MGI:1858008|MGI:2148567 (MGI:2675534|PMID:12975353), (MGI:3833040|PMID:19154719)
(PMID:20123964)
RGD PMID:12975353 PMID:19154719 PMID:20123964 MGI:2675534 MGI:3833040 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
JBrowse link
G Cxcl12 C-X-C motif chemokine ligand 12 acts_upstream_of_or_within ISO MGI:1934384 (MGI:3578491|PMID:15626744) RGD PMID:15626744 MGI:3578491 NCBI chr 4:150,388,326...150,401,173
Ensembl chr 4:150,388,325...150,401,168
JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 acts_upstream_of_or_within ISO MGI:1934442 (MGI:3578491|PMID:15626744) RGD PMID:15626744 MGI:3578491 NCBI chr13:40,077,976...40,081,883
Ensembl chr13:40,077,976...40,081,883
JBrowse link
G Dll4 delta like canonical Notch ligand 4 involved_in ISO (MGI:3056036|PMID:15466159) RGD PMID:15466159 MGI:3056036 NCBI chr 3:106,317,114...106,327,004
Ensembl chr 3:106,316,986...106,326,931
JBrowse link
G Edn1 endothelin 1 acts_upstream_of_or_within
involved_in
ISO MGI:1857637 (MGI:74210|PMID:7615798)
MGI:1857637 (MGI:5532613|PMID:23933587)
RGD PMID:7615798 PMID:23933587 MGI:5532613 MGI:74210 NCBI chr17:22,454,924...22,460,812
Ensembl chr17:22,454,420...22,460,885
JBrowse link
G Ednra endothelin receptor type A acts_upstream_of_or_within
involved_in
ISO MGI:1347481 (MGI:3606840|PMID:15664398)
MGI:3773698|MGI:4867385 (MGI:5532613|PMID:23933587)
RGD PMID:15664398 PMID:23933587 MGI:3606840 MGI:5532613 NCBI chr19:30,233,540...30,303,727
Ensembl chr19:30,233,571...30,297,049
JBrowse link
G Eng endoglin involved_in ISO (MGI:1337912|PMID:10348742) RGD PMID:10348742 MGI:1337912 NCBI chr 3:15,934,566...15,972,618
Ensembl chr 3:15,934,518...15,973,230
JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO MGI:95668 (MGI:3588904|PMID:15996652) RGD PMID:15996652 MGI:3588904 NCBI chr 1:244,584,477...244,590,359
Ensembl chr 1:244,584,652...244,590,359
JBrowse link
G Flt1 Fms related receptor tyrosine kinase 1 acts_upstream_of_or_within ISO MGI:1857717 (MGI:3045573|PMID:14982871) RGD PMID:14982871 MGI:3045573 NCBI chr12:7,296,899...7,468,626
Ensembl chr12:7,297,292...7,468,626
JBrowse link
G Foxc2 forkhead box C2 acts_upstream_of_or_within ISO MGI:105923 (MGI:3606840|PMID:15664398) RGD PMID:15664398 MGI:3606840 NCBI chr19:49,186,034...49,188,736
Ensembl chr19:49,185,662...49,188,737
JBrowse link
G Gbx2 gastrulation brain homeobox 2 acts_upstream_of_or_within ISO MGI:1857634|MGI:99604 (MGI:3588904|PMID:15996652) RGD PMID:15996652 MGI:3588904 NCBI chr 9:90,509,633...90,512,212
Ensembl chr 9:90,509,633...90,512,212
JBrowse link
G Gdf2 growth differentiation factor 2 involved_in ISO (PMID:20406889)
(MGI:4830635|PMID:20406889)
RGD PMID:20406889 MGI:4830635 NCBI chr16:9,255,430...9,261,429
Ensembl chr16:9,255,430...9,261,429
JBrowse link
G Gna13 G protein subunit alpha 13 acts_upstream_of_or_within ISO MGI:2450311|MGI:3583876 (MGI:3583513|PMID:15919816) RGD PMID:15919816 MGI:3583513 NCBI chr10:94,337,939...94,370,774
Ensembl chr10:94,337,725...94,370,774
JBrowse link
G Ihh Indian hedgehog signaling molecule acts_upstream_of_or_within ISO MGI:1934258 (MGI:3574706|PMID:15689378) RGD PMID:15689378 MGI:3574706 NCBI chr 9:76,504,315...76,510,532
Ensembl chr 9:76,504,315...76,510,532
JBrowse link
G Kdr kinase insert domain receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:23688497)
Ensembl
RGD
PMID:23688497 GO_REF:0000107 NCBI chr14:32,217,871...32,261,018
Ensembl chr14:32,217,871...32,261,018
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within ISO MGI:1926601 (MGI:3833040|PMID:19154719) RGD PMID:19154719 MGI:3833040 NCBI chr 2:219,666,549...219,779,815
Ensembl chr 2:219,666,592...219,779,794
JBrowse link
G Mir15b microRNA 15b acts_upstream_of ISO (PMID:23688497) RGD PMID:23688497 NCBI chr 2:153,245,200...153,245,297
Ensembl chr 2:153,245,200...153,245,297
JBrowse link
G Mir16 microRNA 16 acts_upstream_of ISO (PMID:23083510) RGD PMID:23083510 NCBI chr 2:153,245,349...153,245,443
Ensembl chr 2:153,245,349...153,245,443
JBrowse link
G Nfatc3 nuclear factor of activated T-cells 3 acts_upstream_of_or_within ISO MGI:1920431 (MGI:2136698|PMID:11439183) RGD PMID:11439183 MGI:2136698 NCBI chr19:33,960,643...34,035,150
Ensembl chr19:33,960,852...34,035,150
JBrowse link
G Nfatc4 nuclear factor of activated T-cells 4 acts_upstream_of_or_within ISO MGI:103296 (MGI:2136698|PMID:11439183) RGD PMID:11439183 MGI:2136698 NCBI chr15:29,286,998...29,314,610
Ensembl chr15:29,305,535...29,314,610
JBrowse link
G Notch4 notch receptor 4 involved_in ISO (MGI:1934537|PMID:11344305) RGD PMID:11344305 MGI:1934537 NCBI chr20:4,160,362...4,184,466
Ensembl chr20:4,160,445...4,184,465
JBrowse link
G Nrarp Notch-regulated ankyrin repeat protein involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:3833551 (MGI:3833040|PMID:19154719)
RGD PMID:19154719 PMID:21873635 MGI:3833040, RGD:13792537 NCBI chr 3:7,992,582...7,995,136
Ensembl chr 3:7,992,552...7,995,133
JBrowse link
G Nrp1 neuropilin 1 acts_upstream_of_or_within
involved_in
ISO MGI:3512099 (MGI:3710026|PMID:17428830)
(MGI:5288256|PMID:21852397), (MGI:5484470|PMID:23315162), (MGI:5562961|PMID:24401374)
RGD PMID:17428830 PMID:21852397 PMID:23315162 PMID:24401374 MGI:3710026 MGI:5288256 MGI:5484470 MGI:5562961 NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
JBrowse link
G Pitx2 paired-like homeodomain 2 acts_upstream_of_or_within ISO MGI:2445428 (MGI:2389284|PMID:12397115) RGD PMID:12397115 MGI:2389284 NCBI chr 2:217,717,738...217,737,293
Ensembl chr 2:217,717,693...217,737,293
JBrowse link
G Plxnd1 plexin D1 acts_upstream_of_or_within ISO MGI:3050678|MGI:5544786 (MGI:3050159|PMID:15239958), (MGI:5509072|PMID:23918385) RGD PMID:15239958 PMID:23918385 MGI:3050159 MGI:5509072 NCBI chr 4:149,002,784...149,043,097
Ensembl chr 4:149,002,784...149,043,244
JBrowse link
G Ppp3r1 protein phosphatase 3, regulatory subunit B, alpha acts_upstream_of_or_within ISO MGI:3043986 (MGI:2136698|PMID:11439183) RGD PMID:11439183 MGI:2136698 NCBI chr14:91,556,743...91,606,230
Ensembl chr14:91,604,121...91,606,907
JBrowse link
G Rbm15 RNA binding motif protein 15 acts_upstream_of_or_within ISO MGI:3706995 (MGI:3833189|PMID:18981216) RGD PMID:18981216 MGI:3833189 NCBI chr 2:194,945,717...194,954,523
Ensembl chr 2:194,945,974...194,954,703
JBrowse link
G Sema3e semaphorin 3E involved_in ISO (MGI:3526793|PMID:15550623) RGD PMID:15550623 MGI:3526793 NCBI chr 4:20,297,534...20,555,287
Ensembl chr 4:20,299,718...20,555,229
JBrowse link
G Sema5a semaphorin 5A acts_upstream_of_or_within ISO MGI:3577050 (MGI:3575993|PMID:15743826) RGD PMID:15743826 MGI:3575993 NCBI chr 2:83,309,843...83,741,084
Ensembl chr 2:83,309,843...83,741,084
JBrowse link
G Sfrp2 secreted frizzled-related protein 2 involved_in ISO (MGI:4835126|PMID:19458075) RGD PMID:19458075 MGI:4835126 NCBI chr 2:169,089,517...169,097,064
Ensembl chr 2:169,089,517...169,097,063
JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
GO_REF:0000024
MGI:1857796 (MGI:3583396|PMID:15936751)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:15936751 GO_REF:0000024 GO_REF:0000107 MGI:3583396 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
JBrowse link
G Srf serum response factor acts_upstream_of_or_within ISO (MGI:3811944|PMID:18804439) RGD PMID:18804439 MGI:3811944 NCBI chr 9:14,426,453...14,435,734
Ensembl chr 9:14,426,472...14,435,733
JBrowse link
G Stk4 serine/threonine kinase 4 acts_upstream_of_or_within ISO MGI:1928487 (MGI:4412133|PMID:19786569) RGD PMID:19786569 MGI:4412133 NCBI chr 3:152,745,958...152,827,747
Ensembl chr 3:152,745,681...152,827,744
JBrowse link
G Tbx20 T-box transcription factor 20 acts_upstream_of_or_within ISO MGI:3579836 (MGI:3578574|PMID:15843414) RGD PMID:15843414 MGI:3578574 NCBI chr 8:23,200,104...23,258,218
Ensembl chr 8:23,204,507...23,258,175
JBrowse link
G Tgfbr2 transforming growth factor, beta receptor 2 acts_upstream_of_or_within ISO MGI:2384513|MGI:2386570 (MGI:3703113|PMID:17078885) RGD PMID:17078885 MGI:3703113 NCBI chr 8:115,794,537...115,883,615
Ensembl chr 8:115,794,537...115,883,228
JBrowse link
G Vegfa vascular endothelial growth factor A involved_in
acts_upstream_of_or_within
ISO (PMID:23083510)
MGI:1931047 (MGI:3710026|PMID:17428830)
(PMID:23688497)
RGD PMID:17428830 PMID:23083510 PMID:23688497 MGI:3710026 NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
JBrowse link
branching involved in lymph vessel morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nfatc1 nuclear factor of activated T-cells 1 acts_upstream_of_or_within ISO MGI:2181762 (MGI:3848105|PMID:19233265) RGD PMID:19233265 MGI:3848105 NCBI chr18:74,046,421...74,156,041
Ensembl chr18:74,046,904...74,156,028
JBrowse link
G Tie1 tyrosine kinase with immunoglobulin-like and EGF-like domains 1 involved_in ISO (MGI:4439415|PMID:20223757) RGD PMID:20223757 MGI:4439415 NCBI chr 5:132,000,013...132,019,658
Ensembl chr 5:132,000,015...132,019,592
JBrowse link
branching involved in mammary gland duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btrc beta-transducin repeat containing E3 ubiquitin protein ligase acts_upstream_of_or_within ISO MGI:3055737 (MGI:3054694|PMID:15340078) RGD PMID:15340078 MGI:3054694 NCBI chr 1:244,210,299...244,380,126
Ensembl chr 1:244,210,314...244,376,721
JBrowse link
G Ccl11 C-C motif chemokine ligand 11 acts_upstream_of_or_within ISO MGI:2384435 (MGI:3640884|PMID:10804170) RGD PMID:10804170 MGI:3640884 NCBI chr10:67,028,328...67,032,929
Ensembl chr10:67,028,328...67,032,926
JBrowse link
G Csf1 colony stimulating factor 1 acts_upstream_of_or_within ISO MGI:1856333 (MGI:3640884|PMID:10804170) RGD PMID:10804170 MGI:3640884 NCBI chr 2:195,377,215...195,396,608
Ensembl chr 2:195,377,215...195,411,704
JBrowse link
G Ddr1 discoidin domain receptor tyrosine kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2388024 (MGI:1932625|PMID:11283268)
Ensembl
RGD
PMID:11283268 GO_REF:0000107 MGI:1932625 NCBI chr20:3,042,494...3,064,442
Ensembl chr20:3,044,320...3,064,468
JBrowse link
G Epha2 Eph receptor A2 involved_in ISO (MGI:5284750|PMID:19321667) RGD PMID:19321667 MGI:5284750 NCBI chr 5:153,605,644...153,634,115
Ensembl chr 5:153,605,644...153,634,117
JBrowse link
G Etv4 ETS variant transcription factor 4 acts_upstream_of_or_within ISO MGI:2445834 (MGI:2667785|PMID:12871699), (MGI:3828920|PMID:18977342) RGD PMID:12871699 PMID:18977342 MGI:2667785 MGI:3828920 NCBI chr10:86,706,749...86,721,974
Ensembl chr10:86,706,749...86,721,974
JBrowse link
G Kdm5b lysine demethylase 5B acts_upstream_of_or_within ISO MGI:4329395 (MGI:5619178|PMID:24802759) RGD PMID:24802759 MGI:5619178 NCBI chr13:46,001,589...46,073,868
Ensembl chr13:46,002,542...46,073,872
JBrowse link
G Lrp5 LDL receptor related protein 5 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:3663738 (MGI:3692480|PMID:16973609)
RGD PMID:16973609 PMID:21873635 MGI:3692480, RGD:13792537 NCBI chr 1:200,814,247...200,917,581
Ensembl chr 1:200,814,250...200,917,581
JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:2156191 (MGI:3849913|PMID:19503830) RGD PMID:19503830 MGI:3849913 NCBI chr 4:167,266,581...167,400,155
Ensembl chr 4:167,270,353...167,400,497
JBrowse link
G Msx2 msh homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1926381 (MGI:1355063|PMID:10742104)
Ensembl
RGD
PMID:10742104 GO_REF:0000107 MGI:1355063 NCBI chr17:11,097,214...11,102,879
Ensembl chr17:11,097,103...11,102,879
JBrowse link
G Pml PML nuclear body scaffold acts_upstream_of_or_within ISO MGI:2429949 (MGI:3839212|PMID:19261859) RGD PMID:19261859 MGI:3839212 NCBI chr 8:58,627,347...58,661,927
Ensembl chr 8:58,628,837...58,658,971
JBrowse link
G Slc12a2 solute carrier family 12 member 2 acts_upstream_of_or_within ISO MGI:1935144 (MGI:2180693|PMID:8864124) RGD PMID:8864124 MGI:2180693 NCBI chr18:51,348,282...51,416,448
Ensembl chr18:51,348,302...51,416,440
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:1857247 (MGI:3589531|PMID:16007215) RGD PMID:16007215 MGI:3589531 NCBI chr 3:146,091,969...146,139,492
Ensembl chr 3:146,091,841...146,139,476
JBrowse link
G Tbx3 T-box transcription factor 3 acts_upstream_of_or_within ISO MGI:2655214 (MGI:3608166|PMID:16222716) RGD PMID:16222716 MGI:3608166 NCBI chr12:36,879,924...36,894,849
Ensembl chr12:36,881,445...36,893,708
JBrowse link
branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts16 ADAM metallopeptidase with thrombospondin type 1 motif, 16 acts_upstream_of_or_within ISO (MGI:5504318|PMID:23661704) RGD PMID:23661704 MGI:5504318 NCBI chr 1:32,430,436...32,562,481
Ensembl chr 1:32,430,436...32,560,494
JBrowse link
G Agt angiotensinogen NOT|acts_upstream_of_or_within ISO MGI:2183545 (MGI:77583|PMID:8675666)
(MGI:2655949|PMID:12657564)
RGD PMID:8675666 PMID:12657564 MGI:2655949 MGI:77583 NCBI chr19:52,529,139...52,549,618
Ensembl chr19:52,529,185...52,540,977
JBrowse link
G Bcl2 BCL2, apoptosis regulator acts_upstream_of_or_within ISO MGI:97486 (MGI:3036971|PMID:14699151), (MGI:3768986|PMID:16672320) RGD PMID:14699151 PMID:16672320 MGI:3036971 MGI:3768986 NCBI chr13:22,689,783...22,853,920 JBrowse link
G Bmp2 bone morphogenetic protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:104903 (MGI:3583399|PMID:15925496)
Ensembl
RGD
PMID:15925496 GO_REF:0000107 MGI:3583399 NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within
ISO
IEA
ISS
(PMID:12631064)
GO_REF:0000107
MGI:1344337 (MGI:3714585|PMID:17522159)
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:12631064 PMID:17522159 GO_REF:0000024 GO_REF:0000107 MGI:3714585 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
JBrowse link
G Cd44 CD44 molecule (Indian blood group) acts_upstream_of_or_within ISO (MGI:2449954|PMID:10926769) RGD PMID:10926769 MGI:2449954 NCBI chr 3:89,155,850...89,244,615
Ensembl chr 3:89,157,058...89,244,620
JBrowse link
G Cited1 Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1 involved_in
NOT|involved_in
IMP
ISO
PMID:15843474
(MGI:3717986|PMID:17615577)
RGD PMID:17615577 PMID:15843474 MGI:3717986, RGD:8554075 NCBI chr  X:67,350,376...67,355,072
Ensembl chr  X:67,350,373...67,355,162
JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 NOT|involved_in ISO (MGI:3717986|PMID:17615577) RGD PMID:17615577 MGI:3717986 NCBI chr 1:12,312,426...12,314,869
Ensembl chr 1:12,312,160...12,314,897
JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within ISO MGI:1858008 (MGI:3714576|PMID:17537789) RGD PMID:17537789 MGI:3714576 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
JBrowse link
G Ctnnbip1 catenin, beta-interacting protein 1 acts_upstream_of_or_within ISO MGI:3045424 (MGI:3757813|PMID:17803964) RGD PMID:17803964 MGI:3757813 NCBI chr 5:159,961,961...160,010,942
Ensembl chr 5:159,961,928...160,010,939
JBrowse link
G Dchs1 dachsous cadherin-related 1 acts_upstream_of_or_within ISO MGI:4867020 (MGI:4939936|PMID:21303848) RGD PMID:21303848 MGI:4939936 NCBI chr 1:160,104,931...160,138,958
Ensembl chr 1:160,104,931...160,124,808
JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2680670|MGI:3699270|MGI:3710242 (MGI:3688770|PMID:16105026), (MGI:3699022|PMID:17172448), (MGI:3709697|PMID:17435047)
Ensembl
RGD
PMID:16105026 PMID:17172448 PMID:17435047 GO_REF:0000107 MGI:3688770 MGI:3699022 MGI:3709697 NCBI chr11:68,911,883...69,103,230
Ensembl chr11:68,911,883...69,102,689
JBrowse link
G Dspp dentin sialophosphoprotein acts_upstream_of_or_within ISO MGI:2653208 (MGI:3686561|PMID:16937369) RGD PMID:16937369 MGI:3686561 NCBI chr14:5,565,562...5,571,669
Ensembl chr14:5,565,629...5,571,672
JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within ISO MGI:102780 (MGI:2662002|PMID:12783782) RGD PMID:12783782 MGI:2662002 NCBI chr 5:4,863,501...5,101,483
Ensembl chr 5:4,955,543...5,101,483
JBrowse link
G Fat4 FAT atypical cadherin 4 acts_upstream_of_or_within ISO MGI:3846573 (MGI:4939936|PMID:21303848) RGD PMID:21303848 MGI:4939936 NCBI chr 2:121,928,188...122,056,711
Ensembl chr 2:121,927,942...122,056,707
JBrowse link
G Fgf2 fibroblast growth factor 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:12631064)
UniProt
RGD
PMID:12631064 GO_REF:0000024 NCBI chr 2:120,236,328...120,290,673
Ensembl chr 2:120,236,328...120,291,221
JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO MGI:2150348 (MGI:3603080|PMID:16049111) RGD PMID:16049111 MGI:3603080 NCBI chr 1:244,584,477...244,590,359
Ensembl chr 1:244,584,652...244,590,359
JBrowse link
G Foxd1 forkhead box D1 acts_upstream_of_or_within ISO (MGI:2675756|PMID:13678594) RGD PMID:13678594 MGI:2675756 NCBI chr 2:29,702,558...29,704,978
Ensembl chr 2:29,702,558...29,704,978
JBrowse link
G Gdnf glial cell derived neurotrophic factor involved_in
acts_upstream_of_or_within
IEA
ISO
ISS
GO_REF:0000107
(MGI:2675756|PMID:13678594), (MGI:4949995|PMID:21281623)
(MGI:81287|PMID:8657307)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:8657307 PMID:13678594 PMID:21281623 GO_REF:0000024 GO_REF:0000107 MGI:2675756 MGI:4949995 MGI:81287 NCBI chr 2:56,893,992...56,919,935
Ensembl chr 2:56,895,010...56,917,209
JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:98297 (MGI:3611729|PMID:16396903) RGD PMID:16396903 MGI:3611729 NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712
JBrowse link
G Gpc3 glypican 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:88177|MGI:894293 (MGI:3583399|PMID:15925496)
Ensembl
RGD
PMID:15925496 GO_REF:0000107 MGI:3583399 NCBI chr  X:131,868,983...132,236,837
Ensembl chr  X:131,868,990...132,236,798
JBrowse link
G Greb1l GREB1 like retinoic acid receptor coactivator acts_upstream_of_or_within ISO (MGI:6094060|PMID:29100091) RGD PMID:29100091 MGI:6094060 NCBI chr18:1,392,330...1,629,483
Ensembl chr18:1,392,725...1,628,067
JBrowse link
G Gzf1 GDNF-inducible zinc finger protein 1 acts_upstream_of_or_within ISO (MGI:2683817|PMID:14522971) RGD PMID:14522971 MGI:2683817 NCBI chr 3:136,119,004...136,131,223
Ensembl chr 3:136,119,113...136,131,223
JBrowse link
G Hoxa11 homeobox A11 acts_upstream_of_or_within ISO MGI:96203 (MGI:2135652|PMID:11493536) RGD PMID:11493536 MGI:2135652 NCBI chr 4:81,342,527...81,346,189
Ensembl chr 4:81,342,528...81,346,232
JBrowse link
G Hoxd11 homeobox D11 acts_upstream_of_or_within ISO MGI:96172 (MGI:2135652|PMID:11493536) RGD PMID:11493536 MGI:2135652 NCBI chr 3:59,584,840...59,587,257
Ensembl chr 3:59,585,039...59,586,783
JBrowse link
G Hs3st3a1 heparan sulfate-glucosamine 3-sulfotransferase 3A1 involved_in ISO MGI:1333853 (MGI:6432531|PMID:32017326) RGD PMID:32017326 MGI:6432531 NCBI chr10:49,092,850...49,180,676
Ensembl chr10:49,094,026...49,180,676
JBrowse link
G Hs3st3b1 heparan sulfate-glucosamine 3-sulfotransferase 3B1 involved_in ISO MGI:1333861 (MGI:6432531|PMID:32017326) RGD PMID:32017326 MGI:6432531 NCBI chr10:48,561,473...48,593,970
Ensembl chr10:48,561,473...48,593,970
JBrowse link
G Ilk integrin-linked kinase acts_upstream_of_or_within ISO (MGI:3575981|PMID:15831470) RGD PMID:15831470 MGI:3575981 NCBI chr 1:160,088,839...160,095,140
Ensembl chr 1:160,088,897...160,095,140
JBrowse link
G Lama5 laminin subunit alpha 5 acts_upstream_of_or_within ISO (MGI:2678847|PMID:14568553) RGD PMID:14568553 MGI:2678847 NCBI chr 3:167,270,296...167,318,370
Ensembl chr 3:167,270,296...167,318,451
JBrowse link
G Lhx1 LIM homeobox 1 acts_upstream_of_or_within ISO (PMID:7909549) RGD PMID:7909549 NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor involved_in ISS
ISO
GO_REF:0000024
(MGI:3830398|PMID:19161241)
UniProt
RGD
PMID:19161241 GO_REF:0000024 MGI:3830398 NCBI chr 7:93,593,705...93,598,633
Ensembl chr 7:93,593,705...93,598,630
JBrowse link
G Npnt nephronectin acts_upstream_of_or_within ISO MGI:3715213 (MGI:3714574|PMID:17537792) RGD PMID:17537792 MGI:3714574 NCBI chr 2:221,391,151...221,459,527
Ensembl chr 2:221,391,153...221,459,401
JBrowse link
G Pax2 paired box 2 involved_in
acts_upstream_of_or_within
ISO
ISS
(PMID:1337742)
MGI:1857114|MGI:88138 (MGI:3768986|PMID:16672320)
GO_REF:0000024
RGD
UniProt
PMID:1337742 PMID:16672320 GO_REF:0000024 MGI:3768986 NCBI chr 1:243,616,509...243,697,454
Ensembl chr 1:243,616,606...243,695,321
JBrowse link
G Pax8 paired box 8 involved_in ISO (PMID:1337742) RGD PMID:1337742 NCBI chr 3:7,185,721...7,242,363
Ensembl chr 3:7,185,723...7,242,363
JBrowse link
G Pbx1 PBX homeobox 1 acts_upstream_of_or_within ISO (MGI:2451200|PMID:12591246) RGD PMID:12591246 MGI:2451200 NCBI chr13:80,278,766...80,588,563
Ensembl chr13:80,278,770...80,588,594
JBrowse link
G Pgf placental growth factor acts_upstream_of_or_within ISO (MGI:2675756|PMID:13678594) RGD PMID:13678594 MGI:2675756 NCBI chr 6:104,816,102...104,826,685
Ensembl chr 6:104,816,104...104,826,685
JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in ISO (PMID:11891195) RGD PMID:11891195 NCBI chr14:5,237,135...5,280,455
Ensembl chr14:5,237,135...5,280,825
JBrowse link
G Pspn persephin acts_upstream_of_or_within ISO (MGI:1196665|PMID:9491986) RGD PMID:9491986 MGI:1196665 NCBI chr 9:1,841,105...1,841,663
Ensembl chr 9:1,840,896...1,854,327
JBrowse link
G Ptch1 patched 1 acts_upstream_of_or_within ISO MGI:1857447 (MGI:4367286|PMID:19809516) RGD PMID:19809516 MGI:4367286 NCBI chr17:1,542,705...1,607,730
Ensembl chr17:1,542,877...1,607,333
JBrowse link
G Sall1 spalt-like transcription factor 1 involved_in
acts_upstream_of
ISO (MGI:2447943|PMID:12482961)
MGI:3603818 (MGI:5563280|PMID:24550112)
RGD PMID:12482961 PMID:24550112 MGI:2447943 MGI:5563280 NCBI chr19:18,005,782...18,022,705
Ensembl chr19:18,007,503...18,022,705
JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
GO_REF:0000024
MGI:1857796 (MGI:3611729|PMID:16396903)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:16396903 GO_REF:0000024 GO_REF:0000107 MGI:3611729 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
JBrowse link
G Six1 SIX homeobox 1 acts_upstream_of_or_within ISO MGI:109344 (MGI:2662002|PMID:12783782) RGD PMID:12783782 MGI:2662002 NCBI chr 6:91,746,739...91,751,975
Ensembl chr 6:91,746,739...91,751,975
JBrowse link
G Smad4 SMAD family member 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:104903|MGI:88177 (MGI:3583399|PMID:15925496)
Ensembl
RGD
PMID:15925496 GO_REF:0000107 MGI:3583399 NCBI chr18:67,243,742...67,274,438
Ensembl chr18:67,243,742...67,274,438
JBrowse link
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO (PMID:8787755) RGD PMID:8787755 NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
JBrowse link
G Tcf21 transcription factor 21 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:2148207 (MGI:1202620|PMID:9507058), (MGI:1347485|PMID:10572052)
UniProt
RGD
PMID:9507058 PMID:10572052 GO_REF:0000024 MGI:1202620 MGI:1347485 NCBI chr 1:22,701,353...22,704,212
Ensembl chr 1:22,701,353...22,704,202
JBrowse link
G Timeless timeless circadian regulator acts_upstream_of_or_within IMP PMID:10963667 RGD
MGI
PMID:10963667 PMID:10963667 RGD:2308864, RGD:2308864 NCBI chr 7:654,804...678,769
Ensembl chr 7:654,822...678,738
JBrowse link
G Tmem59l transmembrane protein 59-like involved_in ISO
IEA
MGI:6441470 (MGI:6432531|PMID:32017326)
GO_REF:0000107
RGD
Ensembl
PMID:32017326 GO_REF:0000107 MGI:6432531 NCBI chr16:18,941,370...18,945,381
Ensembl chr16:18,941,567...18,945,381
JBrowse link
G Wnt1 Wnt family member 1 acts_upstream_of_or_within ISO MGI:1197020 (MGI:3588895|PMID:16054034) RGD PMID:16054034 MGI:3588895 NCBI chr 7:129,938,604...129,942,651
Ensembl chr 7:129,938,604...129,942,651
JBrowse link
G Wnt4 Wnt family member 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3588895|PMID:16054034)
Ensembl
RGD
PMID:16054034 GO_REF:0000107 MGI:3588895 NCBI chr 5:149,513,573...149,535,415
Ensembl chr 5:149,514,018...149,532,859
JBrowse link
G Wnt6 Wnt family member 6 acts_upstream_of_or_within ISO MGI:98957 (MGI:2178881|PMID:11948913) RGD PMID:11948913 MGI:2178881 NCBI chr 9:76,329,882...76,343,523
Ensembl chr 9:76,329,882...76,343,523
JBrowse link
G Wnt9b Wnt family member 9B acts_upstream_of_or_within ISO MGI:3526437|MGI:98953 (MGI:3588895|PMID:16054034) RGD PMID:16054034 MGI:3588895 NCBI chr10:88,635,330...88,657,035
Ensembl chr10:88,635,331...88,657,035
JBrowse link
G Wt1 WT1 transcription factor involved_in ISS
ISO
GO_REF:0000024
(MGI:1333093|PMID:10101119)
UniProtKB:P22561 (PMID:10101119)
UniProt
RGD
PMID:10101119 GO_REF:0000024 MGI:1333093 NCBI chr 3:91,566,540...91,613,653
Ensembl chr 3:91,567,001...91,613,643
JBrowse link
branching morphogenesis of an epithelial tube term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4galt1 beta-1,4-galactosyltransferase 1 acts_upstream_of_or_within ISO MGI:2178779|MGI:2450889 (MGI:2178150|PMID:11900463), (MGI:3052392|PMID:15282149) RGD PMID:11900463 PMID:15282149 MGI:2178150 MGI:3052392 NCBI chr 5:55,935,614...55,982,461
Ensembl chr 5:55,935,615...55,982,461
JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in ISS
ISO
GO_REF:0000024
(PMID:10706139)
UniProt
RGD
PMID:10706139 GO_REF:0000024 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
JBrowse link
G Bmp7 bone morphogenetic protein 7 acts_upstream_of_or_within ISO (MGI:3575981|PMID:15831470) RGD PMID:15831470 MGI:3575981 NCBI chr 3:161,639,915...161,716,938
Ensembl chr 3:161,516,462...161,716,788
JBrowse link
G Casr calcium-sensing receptor IMP positive regulation RGD PMID:20117086 RGD:7206840 NCBI chr11:64,235,251...64,304,811
Ensembl chr11:64,235,251...64,304,811
JBrowse link
G Clic4 chloride intracellular channel 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3838012 (MGI:3837628|PMID:19197003)
Ensembl
RGD
PMID:19197003 GO_REF:0000107 MGI:3837628 NCBI chr 5:147,456,819...147,513,278
Ensembl chr 5:147,453,712...147,513,452
JBrowse link
G Dicer1 dicer 1 ribonuclease III acts_upstream_of_or_within ISO MGI:3053959|MGI:3589209 (MGI:3617296|PMID:16452165) RGD PMID:16452165 MGI:3617296 NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965
JBrowse link
G Egf epidermal growth factor acts_upstream_of_or_within ISO (MGI:3575981|PMID:15831470) RGD PMID:15831470 MGI:3575981 NCBI chr 2:218,219,408...218,302,370
Ensembl chr 2:218,219,415...218,302,064
JBrowse link
G Fgf10 fibroblast growth factor 10 involved_in ISO (PMID:17959718) RGD PMID:17959718 NCBI chr 2:50,801,897...50,875,428
Ensembl chr 2:50,800,992...50,876,866
JBrowse link
G Gdf7 growth differentiation factor 7 acts_upstream_of_or_within ISO MGI:2387817 (MGI:1934988|PMID:11356025) RGD PMID:11356025 MGI:1934988 NCBI chr 6:31,171,495...31,182,447
Ensembl chr 6:31,178,119...31,182,447
JBrowse link
G Gli2 GLI family zinc finger 2 acts_upstream_of_or_within ISO MGI:1857509 (MGI:1277743|PMID:9731531) RGD PMID:9731531 MGI:1277743 NCBI chr13:29,946,809...30,163,901
Ensembl chr13:29,946,809...30,163,574
JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:1856276 (MGI:3608164|PMID:16247775) RGD PMID:16247775 MGI:3608164 NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712
JBrowse link
G Hnf1b HNF1 homeobox B acts_upstream_of_or_within ISO MGI:1857856 (MGI:4430439|PMID:20040500) RGD PMID:20040500 MGI:4430439 NCBI chr10:68,735,894...68,789,888
Ensembl chr10:68,735,894...68,789,888
JBrowse link
G Igf1 insulin-like growth factor 1 acts_upstream_of_or_within ISO MGI:1861704 (MGI:3616136|PMID:15059953) RGD PMID:15059953 MGI:3616136 NCBI chr 7:22,282,895...22,361,972
Ensembl chr 7:22,282,930...22,359,296
JBrowse link
G Izumo1 izumo sperm-egg fusion 1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:96,090,817...96,096,893 JBrowse link
G Kdr kinase insert domain receptor acts_upstream_of_or_within ISO (MGI:3613102|PMID:16375885) RGD PMID:16375885 MGI:3613102 NCBI chr14:32,217,871...32,261,018
Ensembl chr14:32,217,871...32,261,018
JBrowse link
G Lama5 laminin subunit alpha 5 acts_upstream_of_or_within ISO (MGI:2678847|PMID:14568553) RGD PMID:14568553 MGI:2678847 NCBI chr 3:167,270,296...167,318,370
Ensembl chr 3:167,270,296...167,318,451
JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase involved_in ISO
IEA
(PMID:16153003)
GO_REF:0000107
RGD
Ensembl
PMID:16153003 GO_REF:0000107 NCBI chr 4:45,790,456...45,898,139
Ensembl chr 4:45,790,791...45,897,876
JBrowse link
G Mgp matrix Gla protein IMP fetal lung RGD PMID:15136295 RGD:1582506 NCBI chr 4:169,766,290...169,769,612
Ensembl chr 4:169,766,279...169,769,667
JBrowse link
G Mks1 MKS transition zone complex subunit 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:4441259|PMID:17185389)
Ensembl
RGD
PMID:17185389 GO_REF:0000107 MGI:4441259 NCBI chr10:72,655,921...72,667,007
Ensembl chr10:72,655,921...72,666,655
JBrowse link
G Mmp14 matrix metallopeptidase 14 acts_upstream_of_or_within ISO MGI:2386246 (MGI:3527919|PMID:15572153) RGD PMID:15572153 MGI:3527919 NCBI chr15:27,887,795...27,897,020
Ensembl chr15:27,887,727...27,899,864
JBrowse link
G Mycn MYCN proto-oncogene, bHLH transcription factor acts_upstream_of_or_within ISO MGI:2388717|MGI:3574949 (MGI:3574742|PMID:15716345) RGD PMID:15716345 MGI:3574742 NCBI chr 6:35,717,764...35,723,590
Ensembl chr 6:35,717,764...35,723,590
JBrowse link
G Nkx3-1 NK3 homeobox 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:1928655 (MGI:1891543|PMID:11002344)
UniProt
RGD
PMID:11002344 GO_REF:0000024 MGI:1891543 NCBI chr15:44,473,851...44,476,443
Ensembl chr15:44,473,851...44,476,441
JBrowse link
G Notch1 notch receptor 1 acts_upstream_of_or_within ISO (MGI:3529381|PMID:15064243) RGD PMID:15064243 MGI:3529381 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
JBrowse link
G Pak1 p21 (RAC1) activated kinase 1 involved_in ISO
ISS
(PMID:20457839)
GO_REF:0000024
RGD
UniProt
PMID:20457839 GO_REF:0000024 NCBI chr 1:152,111,172...152,226,390
Ensembl chr 1:152,111,188...152,226,383
JBrowse link
G Pkd1 polycystin 1, transient receptor potential channel interacting involved_in ISO (PMID:12482949)
(MGI:5603942|PMID:24939912)
RGD PMID:12482949 PMID:24939912 MGI:5603942 NCBI chr10:13,573,779...13,621,138
Ensembl chr10:13,573,021...13,621,128
JBrowse link
G Pkhd1 PKHD1 ciliary IPT domain containing fibrocystin/polyductin acts_upstream_of_or_within ISO (MGI:4880601|PMID:20875407) RGD PMID:20875407 MGI:4880601 NCBI chr 9:22,547,396...23,037,443
Ensembl chr 9:22,549,513...23,037,381
JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha acts_upstream_of_or_within ISO (MGI:3039057|PMID:15042703) RGD PMID:15042703 MGI:3039057 NCBI chr 1:201,485,117...201,488,734
Ensembl chr 1:201,485,085...201,497,327
JBrowse link
G Pxn paxillin acts_upstream_of_or_within ISO (MGI:2680875|PMID:14636584) RGD PMID:14636584 MGI:2680875 NCBI chr12:41,060,791...41,107,962
Ensembl chr12:41,060,791...41,107,931
JBrowse link
G Rasip1 Ras interacting protein 1 involved_in ISO (MGI:5052000|PMID:21396893) RGD PMID:21396893 MGI:5052000 NCBI chr 1:96,097,078...96,109,564
Ensembl chr 1:96,091,074...96,109,562
JBrowse link
G Sema5a semaphorin 5A acts_upstream_of_or_within ISO MGI:3577050 (MGI:3575993|PMID:15743826) RGD PMID:15743826 MGI:3575993 NCBI chr 2:83,309,843...83,741,084
Ensembl chr 2:83,309,843...83,741,084
JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:1857796|MGI:1934261|MGI:1934268|MGI:2679524 (MGI:1289788|PMID:9768363), (MGI:3039063|PMID:15042696), (MGI:3050270|PMID:15305287)
UniProt
RGD
PMID:9768363 PMID:15042696 PMID:15305287 GO_REF:0000024 MGI:1289788 MGI:3039063 MGI:3050270 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
JBrowse link
G Slit2 slit guidance ligand 2 involved_in ISO (PMID:18345009), (PMID:19005219) RGD PMID:18345009 PMID:19005219 NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948
JBrowse link
G Spry2 sprouty RTK signaling antagonist 2 acts_upstream_of_or_within ISO (MGI:1331548|PMID:10074434) RGD PMID:10074434 MGI:1331548 NCBI chr15:82,692,312...82,697,408
Ensembl chr15:82,692,143...82,698,009
JBrowse link
G Timeless timeless circadian regulator involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:2675515|PMID:12950082)
Ensembl
RGD
PMID:12950082 GO_REF:0000107 MGI:2675515 NCBI chr 7:654,804...678,769
Ensembl chr 7:654,822...678,738
JBrowse link
G Tmem67 transmembrane protein 67 involved_in ISO (MGI:4441259|PMID:17185389) RGD PMID:17185389 MGI:4441259 NCBI chr 5:25,536,458...25,589,378
Ensembl chr 5:25,536,458...25,589,334
JBrowse link
G Vegfa vascular endothelial growth factor A acts_upstream_of_or_within ISO (MGI:3613102|PMID:16375885) RGD PMID:16375885 MGI:3613102 NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
JBrowse link
G Wnt4 Wnt family member 4 acts_upstream_of_or_within ISO MGI:98960 (MGI:2178881|PMID:11948913) RGD PMID:11948913 MGI:2178881 NCBI chr 5:149,513,573...149,535,415
Ensembl chr 5:149,514,018...149,532,859
JBrowse link
G Wnt9b Wnt family member 9B acts_upstream_of_or_within ISO MGI:3526437 (MGI:3588895|PMID:16054034) RGD PMID:16054034 MGI:3588895 NCBI chr10:88,635,330...88,657,035
Ensembl chr10:88,635,331...88,657,035
JBrowse link
bronchiole morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within ISO MGI:1859647|MGI:3629660 (MGI:3578606|PMID:15800000) RGD PMID:15800000 MGI:3578606 NCBI chr 2:50,801,897...50,875,428
Ensembl chr 2:50,800,992...50,876,866
JBrowse link
bronchus morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tgfbr2 transforming growth factor, beta receptor 2 acts_upstream_of_or_within ISO MGI:2384513 (MGI:3829327|PMID:18990706) RGD PMID:18990706 MGI:3829327 NCBI chr 8:115,794,537...115,883,615
Ensembl chr 8:115,794,537...115,883,228
JBrowse link
G Tulp3 TUB like protein 3 acts_upstream_of_or_within ISO MGI:2388066 (MGI:3841503|PMID:19286674) RGD PMID:19286674 MGI:3841503 NCBI chr 4:161,590,478...161,632,514
Ensembl chr 4:161,590,479...161,632,149
JBrowse link
bud dilation involved in lung branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:8674409)
GO_REF:0000107
RGD
Ensembl
PMID:8674409 GO_REF:0000107 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
JBrowse link
bud elongation involved in lung branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3788965|PMID:18367557)
Ensembl
RGD
PMID:18367557 GO_REF:0000107 MGI:3788965 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within ISO MGI:1345138|MGI:1345139 (MGI:5052190|PMID:21764747) RGD PMID:21764747 MGI:5052190 NCBI chr 2:50,801,897...50,875,428
Ensembl chr 2:50,800,992...50,876,866
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO MGI:3629660 (MGI:3688953|PMID:16989802) RGD PMID:16989802 MGI:3688953 NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626
JBrowse link
G Rdh10 retinol dehydrogenase 10 acts_upstream_of_or_within ISO (MGI:3709664|PMID:17473173) RGD PMID:17473173 MGI:3709664 NCBI chr 5:3,186,671...3,215,572
Ensembl chr 5:3,188,445...3,215,572
JBrowse link
G Spry1 sprouty RTK signaling antagonist 1 acts_upstream_of_or_within ISO MGI:1099809|MGI:1345138 (MGI:5052190|PMID:21764747) RGD PMID:21764747 MGI:5052190 NCBI chr 2:120,557,276...120,561,918
Ensembl chr 2:120,556,706...120,566,189
JBrowse link
G Spry2 sprouty RTK signaling antagonist 2 acts_upstream_of_or_within ISO MGI:1099809|MGI:1345139 (MGI:5052190|PMID:21764747) RGD PMID:21764747 MGI:5052190 NCBI chr15:82,692,312...82,697,408
Ensembl chr15:82,692,143...82,698,009
JBrowse link
G Yap1 Yes1 associated transcriptional regulator acts_upstream_of_or_within ISO MGI:3053959|MGI:5316446 (MGI:5586932|PMID:25043473) RGD PMID:25043473 MGI:5586932 NCBI chr 8:5,095,705...5,166,808
Ensembl chr 8:5,095,722...5,167,010
JBrowse link
bud outgrowth involved in lung branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within ISO (PMID:9740653) RGD PMID:9740653 NCBI chr 2:50,801,897...50,875,428
Ensembl chr 2:50,800,992...50,876,866
JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857796 (MGI:1277744|PMID:9731532)
Ensembl
RGD
PMID:9731532 GO_REF:0000107 MGI:1277744 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
JBrowse link
G Tmtc3 transmembrane O-mannosyltransferase targeting cadherins 3 acts_upstream_of_or_within ISO MGI:4124060 (MGI:5300435|PMID:21956870) RGD PMID:21956870 MGI:5300435 NCBI chr 7:35,264,886...35,310,010
Ensembl chr 7:35,264,892...35,310,385
JBrowse link
G Tnc tenascin C IMP RGD PMID:16928692 RGD:4889612 NCBI chr 5:77,375,851...77,460,712
Ensembl chr 5:77,375,851...77,460,624
JBrowse link
cell adhesion involved in sprouting angiogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rtn4 reticulon 4 involved_in ISS
ISO
GO_REF:0000024
(PMID:15034570)
UniProt
RGD
PMID:15034570 GO_REF:0000024 NCBI chr14:103,450,074...103,497,687
Ensembl chr14:103,449,930...103,497,686
JBrowse link
cell migration involved in coronary angiogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdgfrb platelet derived growth factor receptor beta involved_in ISS
ISO
GO_REF:0000024
(MGI:2680741|PMID:14624252)
UniProt
RGD
PMID:14624252 GO_REF:0000024 MGI:2680741 NCBI chr18:54,500,002...54,538,843
Ensembl chr18:54,499,964...54,538,843
JBrowse link
cell migration involved in coronary vasculogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mir1 microRNA 1 involved_in ISO (PMID:23625462) RGD PMID:23625462 NCBI chr18:1,887,537...1,887,623 JBrowse link
G Mir1b microRNA 1b involved_in ISO (PMID:23625462) RGD PMID:23625462 NCBI chr 3:167,487,117...167,487,201
Ensembl chr 3:167,487,117...167,487,201
JBrowse link
cell migration involved in sprouting angiogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adtrp androgen-dependent TFPI-regulating protein involved_in ISO (PMID:28341552) RGD PMID:28341552 NCBI chr17:22,930,012...22,993,834
Ensembl chr17:22,930,740...22,993,826
JBrowse link
G Akt1 AKT serine/threonine kinase 1 involved_in ISO (PMID:28341552) RGD PMID:28341552 NCBI chr 6:131,713,716...131,735,319
Ensembl chr 6:131,713,720...131,733,921
JBrowse link
G Clec14a C-type lectin domain containing 14A involved_in ISO MGI:5292853 (MGI:5780028|PMID:25745997) RGD PMID:25745997 MGI:5780028 NCBI chr 6:75,881,470...75,884,612
Ensembl chr 6:75,881,473...75,884,612
JBrowse link
G Efnb2 ephrin B2 involved_in ISO (PMID:12734395) RGD PMID:12734395 NCBI chr16:80,783,389...80,827,420
Ensembl chr16:80,783,417...80,824,391
JBrowse link
G Egr3 early growth response 3 involved_in ISO (PMID:18059339) RGD PMID:18059339 NCBI chr15:45,150,335...45,156,052
Ensembl chr15:45,150,567...45,154,627
JBrowse link
G Ephb4 EPH receptor B4 involved_in ISO (PMID:12734395) RGD PMID:12734395 NCBI chr12:19,326,411...19,351,667
Ensembl chr12:19,326,427...19,351,314
JBrowse link
G Fgf2 fibroblast growth factor 2 involved_in ISO UniProtKB:Q9UQL6 (PMID:18059339), (PMID:19351956) RGD PMID:18059339 PMID:19351956 NCBI chr 2:120,236,328...120,290,673
Ensembl chr 2:120,236,328...120,291,221
JBrowse link
G Gpld1 glycosylphosphatidylinositol specific phospholipase D1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:17720976)
UniProt
Ensembl
RGD
PMID:17720976 GO_REF:0000024 GO_REF:0000107 NCBI chr17:40,084,427...40,132,035
Ensembl chr17:40,084,617...40,126,939
JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist involved_in ISO (MGI:3834346|PMID:17077323), (MGI:4845816|PMID:20660291) RGD PMID:17077323 PMID:20660291 MGI:3834346 MGI:4845816 NCBI chr 3:100,512,317...100,524,001
Ensembl chr 3:100,512,313...100,524,082
JBrowse link
G Itgb1 integrin subunit beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3615102|PMID:16424942)
Ensembl
RGD
PMID:16424942 GO_REF:0000107 MGI:3615102 NCBI chr19:56,705,123...56,753,199
Ensembl chr19:56,705,171...56,753,195
JBrowse link
G Kdr kinase insert domain receptor involved_in ISO
IEA
(MGI:4845816|PMID:20660291)
GO_REF:0000107
RGD
Ensembl
PMID:20660291 GO_REF:0000107 MGI:4845816 NCBI chr14:32,217,871...32,261,018
Ensembl chr14:32,217,871...32,261,018
JBrowse link
G Mia3 MIA SH3 domain ER export factor 3 involved_in ISO (PMID:28341552) RGD PMID:28341552 NCBI chr13:94,970,421...95,012,071
Ensembl chr13:94,970,424...95,011,972
JBrowse link
G Mmrn2 multimerin 2 involved_in ISO (MGI:5780028|PMID:25745997) RGD PMID:25745997 MGI:5780028 NCBI chr16:9,705,925...9,727,405
Ensembl chr16:9,705,892...9,727,405
JBrowse link
G Nr4a1 nuclear receptor subfamily 4, group A, member 1 involved_in ISO (PMID:18059339) RGD PMID:18059339 NCBI chr 7:132,368,399...132,389,300
Ensembl chr 7:132,374,840...132,389,297
JBrowse link
G Nrp1 neuropilin 1 involved_in ISO (MGI:5484470|PMID:23315162) RGD PMID:23315162 MGI:5484470 NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
JBrowse link
G Pik3r3 phosphoinositide-3-kinase regulatory subunit 3 involved_in ISO
IEA
UniProtKB:P31749|UniProtKB:Q96IZ2 (PMID:28341552)
GO_REF:0000107
RGD
Ensembl
PMID:28341552 GO_REF:0000107 NCBI chr 5:129,700,925...129,772,591
Ensembl chr 5:129,701,229...129,772,583
JBrowse link
G Robo1 roundabout guidance receptor 1 involved_in IEA
ISO
GO_REF:0000107
UniProtKB:Q9UQL6 (PMID:19351956)
Ensembl
RGD
PMID:19351956 GO_REF:0000107 NCBI chr11:10,580,863...11,621,672
Ensembl chr11:10,580,908...11,620,203
JBrowse link
G Slit2 slit guidance ligand 2 involved_in ISO (PMID:19351956) RGD PMID:19351956 NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948
JBrowse link
G Srf serum response factor involved_in
acts_upstream_of_or_within
ISO (PMID:15180964)
(MGI:3811944|PMID:18804439)
RGD PMID:15180964 PMID:18804439 MGI:3811944 NCBI chr 9:14,426,453...14,435,734
Ensembl chr 9:14,426,472...14,435,733
JBrowse link
G Tdgf1 teratocarcinoma-derived growth factor 1 involved_in ISO (PMID:17720976) RGD PMID:17720976 NCBI chr 8:110,924,774...110,938,545
Ensembl chr 8:110,925,024...110,930,308
JBrowse link
G Vegfa vascular endothelial growth factor A involved_in ISO (PMID:18059339), (PMID:20660291) RGD PMID:18059339 PMID:20660291 NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
JBrowse link
cell migration involved in vasculogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdgfrb platelet derived growth factor receptor beta involved_in ISO
ISS
(MGI:2680741|PMID:14624252)
GO_REF:0000024
RGD
UniProt
PMID:14624252 GO_REF:0000024 MGI:2680741 NCBI chr18:54,500,002...54,538,843
Ensembl chr18:54,499,964...54,538,843
JBrowse link
G Rtn4 reticulon 4 involved_in ISS
ISO
GO_REF:0000024
(MGI:5492189|PMID:23625008)
UniProt
RGD
PMID:23625008 GO_REF:0000024 MGI:5492189 NCBI chr14:103,450,074...103,497,687
Ensembl chr14:103,449,930...103,497,686
JBrowse link
G Setd2 SET domain containing 2, histone lysine methyltransferase acts_upstream_of_or_within ISO MGI:4437211 (MGI:4431136|PMID:20133625) RGD PMID:20133625 MGI:4431136 NCBI chr 8:110,511,808...110,597,489
Ensembl chr 8:110,511,772...110,597,489
JBrowse link
central nervous system vasculogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within ISO MGI:2148569 (MGI:3821408|PMID:19023080) RGD PMID:19023080 MGI:3821408 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
JBrowse link
G Eng endoglin involved_in ISO (PMID:7894484) RGD PMID:7894484 NCBI chr 3:15,934,566...15,972,618
Ensembl chr 3:15,934,518...15,973,230
JBrowse link
G Rtn4 reticulon 4 involved_in ISS
ISO
GO_REF:0000024
(MGI:5492189|PMID:23625008)
UniProt
RGD
PMID:23625008 GO_REF:0000024 MGI:5492189 NCBI chr14:103,450,074...103,497,687
Ensembl chr14:103,449,930...103,497,686
JBrowse link
G Wnt7a Wnt family member 7A acts_upstream_of_or_within ISO MGI:98962 (MGI:3821408|PMID:19023080) RGD PMID:19023080 MGI:3821408 NCBI chr 4:123,863,108...123,908,981
Ensembl chr 4:123,863,108...123,908,981
JBrowse link
G Wnt7b Wnt family member 7B acts_upstream_of_or_within ISO MGI:98961 (MGI:3821408|PMID:19023080) RGD PMID:19023080 MGI:3821408 NCBI chr 7:116,634,817...116,679,089
Ensembl chr 7:116,634,814...116,679,581
JBrowse link
cloaca development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahi1 Abelson helper integration site 1 involved_in ISS
ISO
GO_REF:0000024
UniProtKB:F8W3V6 (MGI:5306539|PMID:21959375)
UniProt
RGD
PMID:21959375 GO_REF:0000024 MGI:5306539 NCBI chr 1:15,768,047...15,886,744
Ensembl chr 1:15,762,462...15,891,041
JBrowse link
cloacal septation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:17442697)
Ensembl
RGD
PMID:17442697 GO_REF:0000107 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
JBrowse link
G Tp63 tumor protein p63 acts_upstream_of_or_within ISO MGI:1934269 (MGI:2387879|PMID:12368184) RGD PMID:12368184 MGI:2387879 NCBI chr11:74,838,858...75,049,764
Ensembl chr11:74,838,859...75,049,398
JBrowse link
G Wnt11 Wnt family member 11 involved_in ISO (PMID:9757009) RGD PMID:9757009 NCBI chr 1:153,134,503...153,154,294
Ensembl chr 1:153,138,197...153,154,294
JBrowse link
coronary artery morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arid2 AT-rich interaction domain 2 acts_upstream_of_or_within ISO MGI:4433303 (MGI:5649178|PMID:25299188) RGD PMID:25299188 MGI:5649178 NCBI chr 7:127,447,192...127,565,987
Ensembl chr 7:127,447,278...127,563,512
JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3715149|MGI:4838016 (MGI:4948416|PMID:21350214)
Ensembl
RGD
PMID:21350214 GO_REF:0000107 MGI:4948416 NCBI chr16:32,917,826...32,919,880
Ensembl chr16:32,917,823...32,919,891
JBrowse link
G Lrp2 LDL receptor related protein 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:5770180|PMID:26822476)
UniProt
RGD
PMID:26822476 GO_REF:0000024 MGI:5770180 NCBI chr 3:54,189,305...54,346,769
Ensembl chr 3:54,189,308...54,346,708
JBrowse link
G Notch1 notch receptor 1 involved_in ISO (MGI:5298073|PMID:21311046) RGD PMID:21311046 MGI:5298073 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
JBrowse link
G Nrp1 neuropilin 1 involved_in ISO (MGI:5490930|PMID:23639442) RGD PMID:23639442 MGI:5490930 NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component acts_upstream_of_or_within ISO MGI:4440621 (MGI:4439427|PMID:20215345) RGD PMID:20215345 MGI:4439427 NCBI chr 2:218,562,670...218,632,753
Ensembl chr 2:218,562,676...218,632,699
JBrowse link
G Tbx1 T-box transcription factor 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:2179190 (MGI:4353596|PMID:18583714)
UniProt
RGD
PMID:18583714 GO_REF:0000024 MGI:4353596 NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380
JBrowse link
G Tgfbr1 transforming growth factor, beta receptor 1 involved_in ISO (MGI:3820811|PMID:18718461) RGD PMID:18718461 MGI:3820811 NCBI chr 5:61,653,773...61,710,777
Ensembl chr 5:61,653,233...61,710,777
JBrowse link
G Vegfa vascular endothelial growth factor A involved_in ISO (MGI:4461879|PMID:18093989) RGD PMID:18093989 MGI:4461879 NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
JBrowse link
coronary vasculature morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hey2 hes-related family bHLH transcription factor with YRPW motif 2 acts_upstream_of_or_within ISO MGI:2447620 (MGI:4838384|PMID:20619341) RGD PMID:20619341 MGI:4838384 NCBI chr 1:26,822,131...26,832,218
Ensembl chr 1:26,822,131...26,832,218
JBrowse link
G Setd2 SET domain containing 2, histone lysine methyltransferase acts_upstream_of_or_within ISO MGI:4437211 (MGI:4431136|PMID:20133625) RGD PMID:20133625 MGI:4431136 NCBI chr 8:110,511,808...110,597,489
Ensembl chr 8:110,511,772...110,597,489
JBrowse link
G Sgcd sarcoglycan, delta acts_upstream_of_or_within ISO MGI:2154694 (MGI:1343715|PMID:10481911) RGD PMID:10481911 MGI:1343715 NCBI chr10:31,346,480...32,328,364
Ensembl chr10:31,280,511...31,724,840
JBrowse link
coronary vein morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Notch1 notch receptor 1 involved_in ISO (MGI:5298073|PMID:21311046) RGD PMID:21311046 MGI:5298073 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
JBrowse link
G Vegfa vascular endothelial growth factor A involved_in ISO (MGI:4461879|PMID:18093989) RGD PMID:18093989 MGI:4461879 NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
JBrowse link
dichotomous subdivision of terminal units involved in lung branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctsh cathepsin H involved_in ISS
ISO
GO_REF:0000024
(MGI:3722010|PMID:17500053)
UniProt
RGD
PMID:17500053 GO_REF:0000024 MGI:3722010 NCBI chr 8:90,608,941...90,627,824
Ensembl chr 8:90,608,941...90,627,824
JBrowse link
dichotomous subdivision of terminal units involved in mammary gland duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Areg amphiregulin acts_upstream_of_or_within ISO MGI:2176531 (MGI:3703920|PMID:17369357) RGD PMID:17369357 MGI:3703920 NCBI chr14:16,972,185...16,981,443
Ensembl chr14:16,972,187...16,981,535
JBrowse link
G Tfap2c transcription factor AP-2 gamma acts_upstream_of_or_within ISO MGI:3040993 (MGI:4422106|PMID:20131354) RGD PMID:20131354 MGI:4422106 NCBI chr 3:161,315,114...161,322,998
Ensembl chr 3:161,315,031...161,322,995
JBrowse link
dichotomous subdivision of terminal units involved in ureteric bud branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxd1 forkhead box D1 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:3525902|PMID:15634693)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:15634693 GO_REF:0000024 GO_REF:0000107 MGI:3525902 NCBI chr 2:29,702,558...29,704,978
Ensembl chr 2:29,702,558...29,704,978
JBrowse link
digestive tract morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agr2 anterior gradient 2, protein disulphide isomerase family member involved_in ISO (MGI:5634869|PMID:25666625) RGD PMID:25666625 MGI:5634869 NCBI chr 6:52,708,602...52,729,378
Ensembl chr 6:52,708,602...52,729,371
JBrowse link
G Bcl2 BCL2, apoptosis regulator acts_upstream_of_or_within ISO MGI:2158305 (MGI:70264|PMID:7812968) RGD PMID:7812968 MGI:70264 NCBI chr13:22,689,783...22,853,920 JBrowse link
G Cfc1 cripto, FRL-1, cryptic family 1 acts_upstream_of_or_within ISO MGI:2179530 (MGI:1346729|PMID:10521397) RGD PMID:10521397 MGI:1346729 NCBI chr 9:36,742,106...36,751,931
Ensembl chr 9:36,739,071...36,751,930
JBrowse link
G Egfr epidermal growth factor receptor acts_upstream_of_or_within ISO MGI:1856402 (MGI:74263|PMID:7618084) RGD PMID:7618084 MGI:74263 NCBI chr14:91,176,931...91,349,722
Ensembl chr14:91,177,067...91,344,382
JBrowse link
G Ephb3 Eph receptor B3 involved_in ISO (MGI:2388849|PMID:12408869) RGD PMID:12408869 MGI:2388849 NCBI chr11:79,840,668...79,859,467
Ensembl chr11:79,840,668...79,859,370
JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO MGI:1931521 (MGI:4352984|PMID:19407216) RGD PMID:19407216 MGI:4352984 NCBI chr14:76,987,242...77,002,671
Ensembl chr14:76,987,993...77,003,341
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2384429 (MGI:4830408|PMID:20808783)
Ensembl
RGD
PMID:20808783 GO_REF:0000107 MGI:4830408 NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
JBrowse link
G Il18 interleukin 18 IEP RGD PMID:21088234 RGD:4889157 NCBI chr 8:50,904,630...50,932,887
Ensembl chr 8:50,906,960...50,932,887
JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO MGI:2158732 (MGI:2155575|PMID:11311163) RGD PMID:11311163 MGI:2155575 NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837
JBrowse link
G Percc1 proline and glutamate rich with coiled coil 1 involved_in ISO (MGI:6368375|PMID:31217582) RGD PMID:31217582 MGI:6368375 NCBI chr10:14,186,513...14,191,213 JBrowse link
G Sfrp1 secreted frizzled-related protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:108078|MGI:1860298|MGI:2135272 (MGI:3839161|PMID:19300477)
Ensembl
RGD
PMID:19300477 GO_REF:0000107 MGI:3839161 NCBI chr16:68,575,763...68,613,905
Ensembl chr16:68,575,763...68,614,286
JBrowse link
G Sfrp2 secreted frizzled-related protein 2 acts_upstream_of_or_within ISO MGI:1860298|MGI:2135272|MGI:892014 (MGI:3839161|PMID:19300477) RGD PMID:19300477 MGI:3839161 NCBI chr 2:169,089,517...169,097,064
Ensembl chr 2:169,089,517...169,097,063
JBrowse link
G Sfrp5 secreted frizzled-related protein 5 acts_upstream_of_or_within ISO MGI:108078|MGI:2135272|MGI:892014 (MGI:3839161|PMID:19300477) RGD PMID:19300477 MGI:3839161 NCBI chr 1:241,006,762...241,011,224
Ensembl chr 1:241,006,762...241,011,224
JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO MGI:1857796 (MGI:1277744|PMID:9731532) RGD PMID:9731532 MGI:1277744 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
JBrowse link
G Sox10 SRY-box transcription factor 10 acts_upstream_of_or_within ISO MGI:1857401 (MGI:3699432|PMID:15843399), (MGI:56157|PMID:6512238) RGD PMID:6512238 PMID:15843399 MGI:3699432 MGI:56157 NCBI chr 7:110,725,274...110,735,544
Ensembl chr 7:110,725,274...110,735,544
JBrowse link
G Stra6 signaling receptor and transporter of retinol STRA6 involved_in ISO (PMID:17273977) RGD PMID:17273977 NCBI chr 8:58,549,743...58,568,861
Ensembl chr 8:58,549,736...58,568,860
JBrowse link
G Stx2 syntaxin 2 IMP RGD PMID:12464668 RGD:1298909 NCBI chr12:27,678,744...27,714,751
Ensembl chr12:27,689,819...27,714,751
JBrowse link
G Tp73 tumor protein p73 acts_upstream_of_or_within ISO MGI:1859911 (MGI:1354064|PMID:10716451) RGD PMID:10716451 MGI:1354064 NCBI chr 5:164,621,377...164,703,958
Ensembl chr 5:164,621,377...164,681,128
JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO MGI:108078|MGI:1860298|MGI:892014 (MGI:3839161|PMID:19300477) RGD PMID:19300477 MGI:3839161 NCBI chr13:84,462,731...84,489,404
Ensembl chr13:84,465,527...84,489,378
JBrowse link
G Wnt5a Wnt family member 5A acts_upstream_of_or_within ISO MGI:1857617 (MGI:3839161|PMID:19300477) RGD PMID:19300477 MGI:3839161 NCBI chr16:3,695,667...3,718,234
Ensembl chr16:3,697,032...3,718,234
JBrowse link
distal tubule morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Klhl3 kelch-like family member 3 involved_in ISO
ISS
(PMID:22406640), (PMID:23453970), (PMID:23576762)
GO_REF:0000024
RGD
UniProt
PMID:22406640 PMID:23453970 PMID:23576762 GO_REF:0000024 NCBI chr17:6,523,089...6,645,971
Ensembl chr17:6,521,912...6,642,154
JBrowse link
G Wnk4 WNK lysine deficient protein kinase 4 involved_in ISO
ISS
(PMID:23453970), (PMID:23576762)
GO_REF:0000024
RGD
UniProt
PMID:23453970 PMID:23576762 GO_REF:0000024 NCBI chr10:86,202,552...86,219,655
Ensembl chr10:86,188,812...86,231,829
JBrowse link
dorsal aorta morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvrl1 activin A receptor like type 1 involved_in ISO (MGI:2674189|PMID:12941632) RGD PMID:12941632 MGI:2674189 NCBI chr 7:132,239,200...132,256,592
Ensembl chr 7:132,239,729...132,256,591
JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A involved_in ISO (MGI:3810850|PMID:18667463) RGD PMID:18667463 MGI:3810850 NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616
JBrowse link
G Dll4 delta like canonical Notch ligand 4 involved_in ISO (MGI:3056004|PMID:15466160), (MGI:3056036|PMID:15466159) RGD PMID:15466159 PMID:15466160 MGI:3056004 MGI:3056036 NCBI chr 3:106,317,114...106,327,004
Ensembl chr 3:106,316,986...106,326,931
JBrowse link
G Eng endoglin involved_in ISO (MGI:2674189|PMID:12941632) RGD PMID:12941632 MGI:2674189 NCBI chr 3:15,934,566...15,972,618
Ensembl chr 3:15,934,518...15,973,230
JBrowse link
G Hey1 hes-related family bHLH transcription factor with YRPW motif 1 involved_in ISO UniProtKB:Q9QUS4 (