Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:ionotropic glutamate receptor signaling pathway
go back to main search page
Accession:GO:0035235 term browser browse the term
Definition:A series of molecular signals initiated by glutamate binding to a glutamate receptor on the surface of the target cell, followed by the movement of ions through a channel in the receptor complex. Ends with regulation of a downstream cellular process, e.g. transcription.
Synonyms:exact_synonym: ionotropic glutamate receptor signalling pathway


show annotations for term's descendants           Sort by:
 
ionotropic glutamate receptor signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G App amyloid beta precursor protein ISO
ISS
MGI:MGI:2652346 (MGI:MGI:3604036|PMID:16025111)
GO_REF:0000024
RGD
UniProt
PMID:16025111 GO_REF:0000024, MGI:MGI:3604036 NCBI chr11:24,425,013...24,641,872
Ensembl chr11:24,425,005...24,641,858
JBrowse link
G Atp1a3 ATPase Na+/K+ transporting subunit alpha 3 ISO MGI:MGI:3696954 (MGI:MGI:3696486|PMID:17234593) RGD PMID:17234593 MGI:MGI:3696486 NCBI chr 1:81,852,423...81,881,565
Ensembl chr 1:81,852,429...81,881,549
JBrowse link
G Camk2a calcium/calmodulin-dependent protein kinase II alpha IDA PMID:12223541 UniProt PMID:12223541 RGD:8554161 NCBI chr18:56,193,978...56,295,869
Ensembl chr18:56,193,978...56,295,869
JBrowse link
G Cdk5r1 cyclin-dependent kinase 5 regulatory subunit 1 IDA PMID:12223541 UniProt PMID:12223541 RGD:8554161 NCBI chr10:67,862,054...67,863,255
Ensembl chr10:67,862,054...67,863,255
JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin ISO MGI:MGI:1933976 (MGI:MGI:3653554|PMID:16483786) RGD PMID:16483786 MGI:MGI:3653554 NCBI chr 1:197,986,384...197,999,726
Ensembl chr 1:197,986,385...197,997,664
JBrowse link
G Cpeb4 cytoplasmic polyadenylation element binding protein 4 IDA PMID:20937770 UniProt PMID:20937770 RGD:8553637 NCBI chr10:15,984,520...16,047,209
Ensembl chr10:15,987,921...16,046,033
JBrowse link
G Fyn FYN proto-oncogene, Src family tyrosine kinase TAS RGD PMID:12736333 RGD:1358550 NCBI chr20:44,436,354...44,630,316
Ensembl chr20:44,436,403...44,630,317
JBrowse link
G Gria1 glutamate ionotropic receptor AMPA type subunit 1 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:42,441,723...42,760,200
Ensembl chr10:42,614,713...42,760,200
JBrowse link
G Gria2 glutamate ionotropic receptor AMPA type subunit 2 IEA
ISS
ISO
GO_REF:0000108
GO_REF:0000024
(PMID:20614889)
GO_REF:0000107
GOC
UniProt
RGD
Ensembl
PMID:20614889 GO_REF:0000024, GO_REF:0000107, GO_REF:0000108 NCBI chr 2:179,584,302...179,704,629
Ensembl chr 2:179,584,308...179,704,629
JBrowse link
G Gria3 glutamate ionotropic receptor AMPA type subunit 3 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr  X:127,561,843...127,829,763
Ensembl chr  X:127,562,660...127,829,753
JBrowse link
G Gria4 glutamate ionotropic receptor AMPA type subunit 4 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 8:1,548,145...2,045,874
Ensembl chr 8:1,548,146...2,045,817
JBrowse link
G Grid1 glutamate ionotropic receptor delta type subunit 1 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr16:11,170,831...11,932,197
Ensembl chr16:11,599,753...11,932,324
JBrowse link
G Grid2 glutamate ionotropic receptor delta type subunit 2 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:94,068,112...95,476,864
Ensembl chr 4:94,696,965...95,442,778
JBrowse link
G Grik1 glutamate ionotropic receptor kainate type subunit 1 IDA
IEA
GO_REF:0000108 GOC PMID:17395219 GO_REF:0000108, RGD:1642466 NCBI chr11:27,811,954...28,213,940
Ensembl chr11:27,811,957...27,971,359
JBrowse link
G Grik2 glutamate ionotropic receptor kainate type subunit 2 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr20:53,791,428...54,517,691
Ensembl chr20:53,789,760...54,517,709
JBrowse link
G Grik3 glutamate ionotropic receptor kainate type subunit 3 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 5:143,500,441...143,715,546
Ensembl chr 5:143,500,441...143,715,546
JBrowse link
G Grik4 glutamate ionotropic receptor kainate type subunit 4 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 8:46,804,134...47,237,546
Ensembl chr 8:46,806,147...47,094,352
JBrowse link
G Grik5 glutamate ionotropic receptor kainate type subunit 5 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:81,885,516...81,946,731
Ensembl chr 1:81,885,521...81,946,714
JBrowse link
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 IDA
IBA
ISO
IEA
PMID:21873635
(PMID:28228639)
GO_REF:0000107
(MGI:MGI:3604036|PMID:16025111)
RGD
Ensembl
PMID:16025111, PMID:28228639, PMID:16477151, PMID:21873635 GO_REF:0000107, MGI:MGI:3604036, RGD:1642190, RGD:13792537 NCBI chr 3:2,507,745...2,534,664
Ensembl chr 3:2,506,896...2,534,663
JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A IDA
IEA
GO_REF:0000108 GOC PMID:16477151 GO_REF:0000108, RGD:1642190 NCBI chr10:5,707,806...6,123,568
Ensembl chr10:5,930,298...6,119,990
JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B IDA
IEA
GO_REF:0000108 GOC PMID:16477151 GO_REF:0000108, RGD:1642190 NCBI chr 4:169,541,620...170,000,216
Ensembl chr 4:169,560,387...169,999,873
JBrowse link
G Grin2c glutamate ionotropic receptor NMDA type subunit 2C IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:103,798,290...103,816,923
Ensembl chr10:103,798,291...103,816,287
JBrowse link
G Grin2d glutamate ionotropic receptor NMDA type subunit 2D IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:101,819,068...101,859,146
Ensembl chr 1:101,820,461...101,856,881
JBrowse link
G Grin3a glutamate ionotropic receptor NMDA type subunit 3A IDA
IBA
IEA
PMID:21873635
GO_REF:0000108
GOC PMID:16477151, PMID:21873635 GO_REF:0000108, RGD:1642190, RGD:13792537 NCBI chr 5:64,928,620...65,073,012
Ensembl chr 5:64,928,620...65,073,012
JBrowse link
G Grin3b glutamate ionotropic receptor NMDA type subunit 3B IDA
IBA
IEA
PMID:21873635
GO_REF:0000108
GOC PMID:11823786, PMID:21873635 GO_REF:0000108, RGD:632842, RGD:13792537 NCBI chr 7:12,764,993...12,771,310
Ensembl chr 7:12,764,993...12,771,310
JBrowse link
G Ptk2b protein tyrosine kinase 2 beta IMP PMID:15814199 Alzheimers_University_of_Toronto PMID:15814199 RGD:8655534 NCBI chr15:42,827,306...42,947,796
Ensembl chr15:42,827,310...42,947,656
JBrowse link
AMPA selective glutamate receptor signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plp1 proteolipid protein 1 IMP RGD PMID:16510724 RGD:30296668 NCBI chr  X:107,494,326...107,511,355
Ensembl chr  X:107,496,072...107,511,348
JBrowse link
NMDA selective glutamate receptor signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Camk2a calcium/calmodulin-dependent protein kinase II alpha IMP PMID:20670832 SynGO PMID:20670832 RGD:12050125 NCBI chr18:56,193,978...56,295,869
Ensembl chr18:56,193,978...56,295,869
JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B IMP PMID:15987933 SynGO PMID:15987933 RGD:12050132 NCBI chr 4:169,541,620...170,000,216
Ensembl chr 4:169,560,387...169,999,873
JBrowse link
G Kalrn kalirin, RhoGEF kinase IMP PMID:18031682 SynGO PMID:18031682 RGD:12050112 NCBI chr11:69,484,293...70,025,682
Ensembl chr11:69,484,293...70,025,633
JBrowse link
G Tiam1 TIAM Rac1 associated GEF 1 IMP PMID:15721239 SynGO PMID:15721239 RGD:12050147 NCBI chr11:29,931,083...30,061,173
Ensembl chr11:29,933,163...30,051,103
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20017
    signaling 7588
      signal transduction 7015
        cell surface receptor signaling pathway 2782
          glutamate receptor signaling pathway 111
            ionotropic glutamate receptor signaling pathway 29
              AMPA selective glutamate receptor signaling pathway 1
              NMDA selective glutamate receptor signaling pathway 4
              kainate selective glutamate receptor signaling pathway 0
Path 2
Term Annotations click to browse term
  biological_process 20017
    biological regulation 13767
      regulation of biological process 13081
        regulation of cellular process 12570
          signal transduction 7015
            cell surface receptor signaling pathway 2782
              glutamate receptor signaling pathway 111
                ionotropic glutamate receptor signaling pathway 29
                  AMPA selective glutamate receptor signaling pathway 1
                  NMDA selective glutamate receptor signaling pathway 4
                  kainate selective glutamate receptor signaling pathway 0
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.