Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:gene silencing by miRNA
go back to main search page
Accession:GO:0035195 term browser browse the term
Definition:Downregulation of gene expression through the action of microRNAs (miRNAs), endogenous 21-24 nucleotide small RNAs processed from stem-loop RNA precursors (pre-miRNAs). Once incorporated into a RNA-induced silencing complex (RISC), miRNAs can downregulate gene expression by either of two posttranscriptional mechanisms: endolytic cleavage of the RNA (often mRNA) or mRNA translational repression, usually accompanied by poly-A tail shortening and subsequent degradation of the mRNA.
Synonyms:exact_synonym: gene silencing by microRNA;   miRNA-mediated gene silencing;   microRNA-mediated gene silencing


show annotations for term's descendants           Sort by:
 
gene silencing by miRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AJUBA ajuba LIM protein IMP (PMID:20616046) MGI PMID:20616046 NCBI chr14:22,971,177...22,982,551
Ensembl chr14:22,971,177...22,982,551
JBrowse link
G CNOT1 CCR4-NOT transcription complex subunit 1 IDA (PMID:23172285), (PMID:24768540) BHF-UCL PMID:23172285, PMID:24768540 NCBI chr16:58,519,951...58,629,826
Ensembl chr16:58,519,951...58,629,885
JBrowse link
G CNOT6 CCR4-NOT transcription complex subunit 6 TAS (PMID:20065043) UniProtKB PMID:20065043 NCBI chr 5:180,494,373...180,578,358
Ensembl chr 5:180,494,379...180,578,358
JBrowse link
G CNOT7 CCR4-NOT transcription complex subunit 7 TAS (PMID:20065043) UniProtKB PMID:20065043 NCBI chr 8:17,221,981...17,246,857
Ensembl chr 8:17,224,966...17,246,878
JBrowse link
G CNOT8 CCR4-NOT transcription complex subunit 8 TAS (PMID:20065043) UniProtKB PMID:20065043 NCBI chr 5:154,857,952...154,876,792
Ensembl chr 5:154,857,553...154,876,793
JBrowse link
G EIF6 eukaryotic translation initiation factor 6 IMP (PMID:17507929) UniProtKB PMID:17507929 NCBI chr20:35,278,906...35,284,772
Ensembl chr20:35,278,907...35,284,985
Ensembl chr20:35,278,907...35,284,985
JBrowse link
G LIMD1 LIM domains containing 1 IMP (PMID:20616046) MGI PMID:20616046 NCBI chr 3:45,594,105...45,686,341
Ensembl chr 3:45,555,394...45,686,341
JBrowse link
G MIR1-1 microRNA 1-1 ISO (MGI:MGI:3510301|PMID:15361871) MGI PMID:15361871 MGI:MGI:3510301 NCBI chr20:62,554,306...62,554,376
Ensembl chr20:62,554,306...62,554,376
JBrowse link
G MIR1-2 microRNA 1-2 ISO (MGI:MGI:5575655|PMID:17397913)
(MGI:MGI:3510301|PMID:15361871)
MGI PMID:15361871, PMID:17397913 MGI:MGI:3510301, MGI:MGI:5575655 NCBI chr18:21,829,004...21,829,088
Ensembl chr18:21,829,004...21,829,088
JBrowse link
G MIR100 microRNA 100 ISO (MGI:MGI:4822296|PMID:20439489) MGI PMID:20439489 MGI:MGI:4822296 NCBI chr11:122,152,229...122,152,308
Ensembl chr11:122,152,229...122,152,308
JBrowse link
G MIR107 microRNA 107 ISO (MGI:MGI:5013695|PMID:21415270) MGI PMID:21415270 MGI:MGI:5013695 NCBI chr10:89,592,747...89,592,827
Ensembl chr10:89,592,747...89,592,827
JBrowse link
G MIR10A microRNA 10a ISO (MGI:MGI:3510301|PMID:15361871) MGI PMID:15361871 MGI:MGI:3510301 NCBI chr17:48,579,838...48,579,947
Ensembl chr17:48,579,838...48,579,947
JBrowse link
G MIR124-1 microRNA 124-1 ISO (MGI:MGI:3706460|PMID:17403776), (MGI:MGI:4438512|PMID:19898466), (MGI:MGI:5303045|PMID:21857657) MGI PMID:17403776, PMID:19898466, PMID:21857657 MGI:MGI:3706460, MGI:MGI:4438512, MGI:MGI:5303045 NCBI chr 8:9,903,388...9,903,472
Ensembl chr 8:9,903,388...9,903,472
JBrowse link
G MIR124-1HG MIR124-1 host gene ISO (MGI:MGI:5528923|PMID:23946534) MGI PMID:23946534 MGI:MGI:5528923 NCBI chr 8:9,900,064...9,903,329
Ensembl chr 8:9,899,871...9,906,678
JBrowse link
G MIR124-2 microRNA 124-2 ISO (MGI:MGI:3706460|PMID:17403776)
(MGI:MGI:3706460|PMID:17403776), (MGI:MGI:4438512|PMID:19898466), (MGI:MGI:5303045|PMID:21857657)
MGI PMID:17403776, PMID:19898466, PMID:21857657 MGI:MGI:3706460, MGI:MGI:4438512, MGI:MGI:5303045 NCBI chr 8:64,379,149...64,379,257
Ensembl chr 8:64,379,149...64,379,257
JBrowse link
G MIR124-3 microRNA 124-3 ISO (MGI:MGI:3706460|PMID:17403776), (MGI:MGI:4438512|PMID:19898466), (MGI:MGI:5303045|PMID:21857657) MGI PMID:17403776, PMID:19898466, PMID:21857657 MGI:MGI:3706460, MGI:MGI:4438512, MGI:MGI:5303045 NCBI chr20:63,178,500...63,178,586
Ensembl chr20:63,178,500...63,178,586
JBrowse link
G MIR125A microRNA 125a ISO (MGI:MGI:4438512|PMID:19898466) MGI PMID:19898466 MGI:MGI:4438512 NCBI chr19:51,693,254...51,693,339
Ensembl chr19:51,693,254...51,693,339
JBrowse link
G MIR125B1 microRNA 125b-1 ISO (MGI:MGI:5882697|PMID:28281528) MGI PMID:28281528 MGI:MGI:5882697 NCBI chr11:122,099,757...122,099,844
Ensembl chr11:122,099,757...122,099,844
JBrowse link
G MIR125B2 microRNA 125b-2 ISO (MGI:MGI:5882697|PMID:28281528) MGI PMID:28281528 MGI:MGI:5882697 NCBI chr21:16,590,237...16,590,325
Ensembl chr21:16,590,237...16,590,325
JBrowse link
G MIR133A1 microRNA 133a-1 ISO (MGI:MGI:3820745|PMID:19015276) MGI PMID:19015276 MGI:MGI:3820745 NCBI chr18:21,825,698...21,825,785
Ensembl chr18:21,825,698...21,825,785
JBrowse link
G MIR133A2 microRNA 133a-2 ISO (MGI:MGI:3820745|PMID:19015276) MGI PMID:19015276 MGI:MGI:3820745 NCBI chr20:62,564,912...62,565,013
Ensembl chr20:62,564,912...62,565,013
JBrowse link
G MIR137 microRNA 137 ISO (MGI:MGI:4822296|PMID:20439489) MGI PMID:20439489 MGI:MGI:4822296 NCBI chr 1:98,046,070...98,046,171
Ensembl chr 1:98,046,070...98,046,171
JBrowse link
G MIR155 microRNA 155 ISO (MGI:MGI:4833768|PMID:20548288) MGI PMID:20548288 MGI:MGI:4833768 NCBI chr21:25,573,980...25,574,044
Ensembl chr21:25,573,980...25,574,044
JBrowse link
G MIR17 microRNA 17 ISO (MGI:MGI:5140688|PMID:21338882) MGI PMID:21338882 MGI:MGI:5140688 NCBI chr13:91,350,605...91,350,688
Ensembl chr13:91,350,605...91,350,688
JBrowse link
G MIR182 microRNA 182 ISO (MGI:MGI:6108693|PMID:28819115) MGI PMID:28819115 MGI:MGI:6108693 NCBI chr 7:129,770,383...129,770,492
Ensembl chr 7:129,770,383...129,770,492
JBrowse link
G MIR183 microRNA 183 ISO (MGI:MGI:6108693|PMID:28819115) MGI PMID:28819115 MGI:MGI:6108693 NCBI chr 7:129,774,905...129,775,014
Ensembl chr 7:129,774,905...129,775,014
JBrowse link
G MIR196A1 microRNA 196a-1 ISO (MGI:MGI:3510301|PMID:15361871) MGI PMID:15361871 MGI:MGI:3510301 NCBI chr17:48,632,490...48,632,559
Ensembl chr17:48,632,490...48,632,559
JBrowse link
G MIR196A2 microRNA 196a-2 ISO (MGI:MGI:3510301|PMID:15361871) MGI PMID:15361871 MGI:MGI:3510301 NCBI chr12:53,991,738...53,991,847
Ensembl chr12:53,991,738...53,991,847
JBrowse link
G MIR200B microRNA 200b ISO (MGI:MGI:5013695|PMID:21415270) MGI PMID:21415270 MGI:MGI:5013695 NCBI chr 1:1,167,104...1,167,198
Ensembl chr 1:1,167,104...1,167,198
JBrowse link
G MIR203B microRNA 203b ISO (MGI:MGI:4946569|PMID:21307095) MGI PMID:21307095 MGI:MGI:4946569 NCBI chr14:104,117,418...104,117,503
Ensembl chr14:104,117,418...104,117,503
JBrowse link
G MIR205 microRNA 205 ISO (MGI:MGI:5514438|PMID:23974039) MGI PMID:23974039 MGI:MGI:5514438 NCBI chr 1:209,432,133...209,432,242
Ensembl chr 1:209,432,133...209,432,242
JBrowse link
G MIR21 microRNA 21 ISO (MGI:MGI:5693365|PMID:19147652)
(MGI:MGI:6208917|PMID:29925839)
MGI PMID:19147652, PMID:29925839 MGI:MGI:5693365, MGI:MGI:6208917 NCBI chr17:59,841,266...59,841,337
Ensembl chr17:59,841,266...59,841,337
JBrowse link
G MIR214 microRNA 214 ISO (MGI:MGI:4839883|PMID:20534588) MGI PMID:20534588 MGI:MGI:4839883 NCBI chr 1:172,138,798...172,138,907
Ensembl chr 1:172,138,798...172,138,907
JBrowse link
G MIR223 microRNA 223 ISO (MGI:MGI:3811177|PMID:18278031) MGI PMID:18278031 MGI:MGI:3811177 NCBI chr  X:66,018,870...66,018,979
Ensembl chr  X:66,018,870...66,018,979
JBrowse link
G MIR23A microRNA 23a ISO (MGI:MGI:5516374|PMID:24101522) MGI PMID:24101522 MGI:MGI:5516374 NCBI chr19:13,836,587...13,836,659
Ensembl chr19:13,836,587...13,836,659
JBrowse link
G MIR26A1 microRNA 26a-1 ISO (MGI:MGI:5494382|PMID:22210897) MGI PMID:22210897 MGI:MGI:5494382 NCBI chr 3:37,969,404...37,969,480
Ensembl chr 3:37,969,404...37,969,480
JBrowse link
G MIR26A2 microRNA 26a-2 ISO (MGI:MGI:5494382|PMID:22210897) MGI PMID:22210897 MGI:MGI:5494382 NCBI chr12:57,824,609...57,824,692
Ensembl chr12:57,824,609...57,824,692
JBrowse link
G MIR26B microRNA 26b ISO (MGI:MGI:5494382|PMID:22210897) MGI PMID:22210897 MGI:MGI:5494382 NCBI chr 2:218,402,646...218,402,722
Ensembl chr 2:218,402,646...218,402,722
JBrowse link
G MIR301A microRNA 301a ISO (MGI:MGI:5426073|PMID:22517757) MGI PMID:22517757 MGI:MGI:5426073 NCBI chr17:59,151,136...59,151,221
Ensembl chr17:59,151,136...59,151,221
JBrowse link
G MIR30A microRNA 30a ISO (MGI:MGI:3838679|PMID:19185580) MGI PMID:19185580 MGI:MGI:3838679 NCBI chr 6:71,403,551...71,403,621
Ensembl chr 6:71,403,551...71,403,621
JBrowse link
G MIR324 microRNA 324 ISO (MGI:MGI:5576401|PMID:24882011) MGI PMID:24882011 MGI:MGI:5576401 NCBI chr17:7,223,297...7,223,379
Ensembl chr17:7,223,297...7,223,379
JBrowse link
G MIR34A microRNA 34a ISO (MGI:MGI:5613071|PMID:25043055)
(MGI:MGI:4822296|PMID:20439489), (MGI:MGI:5613071|PMID:25043055)
MGI PMID:20439489, PMID:25043055 MGI:MGI:4822296, MGI:MGI:5613071 NCBI chr 1:9,151,668...9,151,777
Ensembl chr 1:9,151,668...9,151,777
JBrowse link
G MIR423 microRNA 423 ISO (MGI:MGI:5922106|PMID:28411267) MGI PMID:28411267 MGI:MGI:5922106 NCBI chr17:30,117,079...30,117,172
Ensembl chr17:30,117,079...30,117,172
JBrowse link
G MIR489 microRNA 489 ISO (MGI:MGI:5312165|PMID:22358842) MGI PMID:22358842 MGI:MGI:5312165 NCBI chr 7:93,483,936...93,484,019
Ensembl chr 7:93,483,936...93,484,019
JBrowse link
G MIR494 microRNA 494 ISO (MGI:MGI:5302482|PMID:20837890) MGI PMID:20837890 MGI:MGI:5302482 NCBI chr14:101,029,634...101,029,714
Ensembl chr14:101,029,634...101,029,714
JBrowse link
G MIR495 microRNA 495 ISO (MGI:MGI:5013695|PMID:21415270) MGI PMID:21415270 MGI:MGI:5013695 NCBI chr14:101,033,755...101,033,836
Ensembl chr14:101,033,755...101,033,836
JBrowse link
G MIR504 microRNA 504 ISO (MGI:MGI:5921469|PMID:26941017) MGI PMID:26941017 MGI:MGI:5921469 NCBI chr  X:138,667,711...138,667,793
Ensembl chr  X:138,667,711...138,667,793
JBrowse link
G MIR511 microRNA 511 ISO (MGI:MGI:5486412|PMID:22832163) MGI PMID:22832163 MGI:MGI:5486412 NCBI chr10:17,845,107...17,845,193
Ensembl chr10:17,845,107...17,845,193
JBrowse link
G MIR668 microRNA 668 ISO (MGI:MGI:6276530|PMID:30325740) MGI PMID:30325740 MGI:MGI:6276530 NCBI chr14:101,055,258...101,055,323
Ensembl chr14:101,055,258...101,055,323
JBrowse link
G MIR7-1 microRNA 7-1 ISO (MGI:MGI:4946569|PMID:21307095) MGI PMID:21307095 MGI:MGI:4946569 NCBI chr 9:83,969,748...83,969,857
Ensembl chr 9:83,969,748...83,969,857
JBrowse link
G MIR873 microRNA 873 ISO (MGI:MGI:6103206|PMID:28837808) MGI PMID:28837808 MGI:MGI:6103206 NCBI chr 9:28,888,879...28,888,955
Ensembl chr 9:28,888,879...28,888,955
JBrowse link
G MIR874 microRNA 874 ISO (MGI:MGI:5551666|PMID:24462679) MGI PMID:24462679 MGI:MGI:5551666 NCBI chr 5:137,647,572...137,647,649
Ensembl chr 5:137,647,572...137,647,649
JBrowse link
G MIR96 microRNA 96 ISO (MGI:MGI:6108693|PMID:28819115) MGI PMID:28819115 MGI:MGI:6108693 NCBI chr 7:129,774,692...129,774,769
Ensembl chr 7:129,774,692...129,774,769
JBrowse link
G MIRLET7A1 microRNA let-7a-1 ISO (MGI:MGI:4438512|PMID:19898466)
(MGI:MGI:5461254|PMID:23152446)
MGI PMID:19898466, PMID:23152446 MGI:MGI:4438512, MGI:MGI:5461254 NCBI chr 9:94,175,957...94,176,036
Ensembl chr 9:94,175,957...94,176,036
JBrowse link
G MIRLET7A2 microRNA let-7a-2 ISO (MGI:MGI:5461254|PMID:23152446) MGI PMID:23152446 MGI:MGI:5461254 NCBI chr11:122,146,522...122,146,593
Ensembl chr11:122,146,522...122,146,593
JBrowse link
G MIRLET7A3 microRNA let-7a-3 ISO (MGI:MGI:3510301|PMID:15361871) MGI PMID:15361871 MGI:MGI:3510301 NCBI chr22:46,112,749...46,112,822
Ensembl chr22:46,112,749...46,112,822
JBrowse link
G MIRLET7B microRNA let-7b ISO (MGI:MGI:5461254|PMID:23152446) MGI PMID:23152446 MGI:MGI:5461254 NCBI chr22:46,113,686...46,113,768
Ensembl chr22:46,113,686...46,113,768
JBrowse link
G MIRLET7C microRNA let-7c ISO (MGI:MGI:3510301|PMID:15361871) MGI PMID:15361871 MGI:MGI:3510301 NCBI chr21:16,539,828...16,539,911
Ensembl chr21:16,539,828...16,539,911
JBrowse link
G MIRLET7E microRNA let-7e ISO (MGI:MGI:3510301|PMID:15361871), (MGI:MGI:4438512|PMID:19898466) MGI PMID:15361871, PMID:19898466 MGI:MGI:3510301, MGI:MGI:4438512 NCBI chr19:51,692,786...51,692,864
Ensembl chr19:51,692,786...51,692,864
JBrowse link
G MOV10 Mov10 RISC complex RNA helicase IMP (PMID:17507929) UniProtKB PMID:17507929 NCBI chr 1:112,674,312...112,702,377
Ensembl chr 1:112,673,141...112,700,746
JBrowse link
G TNRC6A trinucleotide repeat containing adaptor 6A IMP
IBA
(PMID:23172285)
(PMID:21873635)
BHF-UCL
GO_Central
PMID:21873635, PMID:23172285 NCBI chr16:24,610,205...24,826,223
Ensembl chr16:24,610,209...24,827,632
JBrowse link
G TNRC6B trinucleotide repeat containing adaptor 6B IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr22:40,044,834...40,335,808
Ensembl chr22:40,044,817...40,335,808
JBrowse link
G TNRC6C trinucleotide repeat containing adaptor 6C IGI
IBA
(PMID:23172285)
(PMID:21873635)
BHF-UCL
GO_Central
PMID:21873635, PMID:23172285 NCBI chr17:77,958,853...78,108,835
Ensembl chr17:77,959,240...78,108,835
JBrowse link
G WTIP WT1 interacting protein IMP (PMID:20616046) MGI PMID:20616046 NCBI chr19:34,481,758...34,512,304
Ensembl chr19:34,481,758...34,512,304
JBrowse link
miRNA loading onto RISC involved in gene silencing by miRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAR adenosine deaminase RNA specific IDA (PMID:23622242) MGI PMID:23622242 NCBI chr 1:154,582,057...154,627,997
Ensembl chr 1:154,582,057...154,628,013
JBrowse link
G AGO1 argonaute RISC component 1 IDA (PMID:19966796) BHF-UCL PMID:19966796 NCBI chr 1:35,869,761...35,930,532
Ensembl chr 1:35,869,808...35,930,532
JBrowse link
G AGO2 argonaute RISC catalytic component 2 IDA (PMID:18178619), (PMID:19966796) BHF-UCL PMID:18178619, PMID:19966796 NCBI chr 8:140,520,156...140,642,406
Ensembl chr 8:140,520,156...140,635,633
JBrowse link
G AGO3 argonaute RISC catalytic component 3 IDA (PMID:19966796) BHF-UCL PMID:19966796 NCBI chr 1:35,925,683...36,072,500
Ensembl chr 1:35,930,718...36,072,500
JBrowse link
G AGO4 argonaute RISC component 4 IDA (PMID:19966796) BHF-UCL PMID:19966796 NCBI chr 1:35,807,630...35,857,890
Ensembl chr 1:35,808,016...35,857,890
JBrowse link
G DICER1 dicer 1, ribonuclease III IDA (PMID:18178619) BHF-UCL PMID:18178619 NCBI chr14:95,086,228...95,158,263
Ensembl chr14:95,086,228...95,158,010
JBrowse link
G TARBP2 TARBP2 subunit of RISC loading complex IDA (PMID:18178619) BHF-UCL PMID:18178619 NCBI chr12:53,500,923...53,506,431
Ensembl chr12:53,500,921...53,506,431
JBrowse link
miRNA mediated inhibition of translation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGO1 argonaute RISC component 1 IDA (PMID:18771919) UniProtKB PMID:18771919 NCBI chr 1:35,869,761...35,930,532
Ensembl chr 1:35,869,808...35,930,532
JBrowse link
G AGO2 argonaute RISC catalytic component 2 IMP
IDA
(PMID:18771919)
(PMID:17671087), (PMID:19801630)
UniProtKB PMID:17671087, PMID:18771919, PMID:19801630 NCBI chr 8:140,520,156...140,642,406
Ensembl chr 8:140,520,156...140,635,633
JBrowse link
G AGO3 argonaute RISC catalytic component 3 IDA (PMID:18771919) UniProtKB PMID:18771919 NCBI chr 1:35,925,683...36,072,500
Ensembl chr 1:35,930,718...36,072,500
JBrowse link
G AGO4 argonaute RISC component 4 IDA (PMID:18771919) UniProtKB PMID:18771919 NCBI chr 1:35,807,630...35,857,890
Ensembl chr 1:35,808,016...35,857,890
JBrowse link
G EIF6 eukaryotic translation initiation factor 6 IMP (PMID:17507929) UniProtKB PMID:17507929 NCBI chr20:35,278,906...35,284,772
Ensembl chr20:35,278,907...35,284,985
Ensembl chr20:35,278,907...35,284,985
JBrowse link
G MIR125A microRNA 125a ISO (MGI:MGI:5465045|PMID:22751012) MGI PMID:22751012 MGI:MGI:5465045 NCBI chr19:51,693,254...51,693,339
Ensembl chr19:51,693,254...51,693,339
JBrowse link
G MIR135A1 microRNA 135a-1 ISO (MGI:MGI:6402838|PMID:32109384) MGI PMID:32109384 MGI:MGI:6402838 NCBI chr 3:52,294,219...52,294,308
Ensembl chr 3:52,294,219...52,294,308
JBrowse link
G MIR143 microRNA 143 ISO (MGI:MGI:5289772|PMID:21441927) MGI PMID:21441927 MGI:MGI:5289772 NCBI chr 5:149,428,918...149,429,023
Ensembl chr 5:149,428,918...149,429,023
JBrowse link
G MIR186 microRNA 186 ISO (MGI:MGI:6402838|PMID:32109384) MGI PMID:32109384 MGI:MGI:6402838 NCBI chr 1:71,067,631...71,067,716
Ensembl chr 1:71,067,631...71,067,716
JBrowse link
G MIR9-1 microRNA 9-1 ISO (MGI:MGI:6402838|PMID:32109384) MGI PMID:32109384 MGI:MGI:6402838 NCBI chr 1:156,420,341...156,420,429
Ensembl chr 1:156,420,341...156,420,429
JBrowse link
G MIRLET7B microRNA let-7b ISO (MGI:MGI:6402838|PMID:32109384) MGI PMID:32109384 MGI:MGI:6402838 NCBI chr22:46,113,686...46,113,768
Ensembl chr22:46,113,686...46,113,768
JBrowse link
G MIRLET7G microRNA let-7g ISO (MGI:MGI:6402838|PMID:32109384) MGI PMID:32109384 MGI:MGI:6402838 NCBI chr 3:52,268,278...52,268,361
Ensembl chr 3:52,268,278...52,268,361
JBrowse link
G NOTCH4 notch receptor 4 TAS Reactome Reactome:R-HSA-1912410 NCBI chr 6:32,194,843...32,224,067
Ensembl chr 6:32,194,843...32,224,067
JBrowse link
G RBM4 RNA binding motif protein 4 IDA (PMID:19801630) UniProtKB PMID:19801630 NCBI chr11:66,638,703...66,668,380
Ensembl chr11:66,638,617...66,668,374
Ensembl chr11:66,638,617...66,668,374
JBrowse link
G TNRC6A trinucleotide repeat containing adaptor 6A IEA
IDA
(PMID:17671087) InterPro
UniProtKB
PMID:17671087 GO_REF:0000002 NCBI chr16:24,610,205...24,826,223
Ensembl chr16:24,610,209...24,827,632
JBrowse link
G TNRC6B trinucleotide repeat containing adaptor 6B IEA InterPro GO_REF:0000002 NCBI chr22:40,044,834...40,335,808
Ensembl chr22:40,044,817...40,335,808
JBrowse link
G TNRC6C trinucleotide repeat containing adaptor 6C IEA
TAS
(PMID:21984184) InterPro
UniProtKB
PMID:21984184 GO_REF:0000002 NCBI chr17:77,958,853...78,108,835
Ensembl chr17:77,959,240...78,108,835
JBrowse link
G TRIM71 tripartite motif containing 71 ISS UniProtKB GO_REF:0000024 NCBI chr 3:32,817,997...32,897,824
Ensembl chr 3:32,817,997...32,897,824
JBrowse link
G ZFP36 ZFP36 ring finger protein ISS
IEA
UniProtKB
Ensembl
GO_REF:0000024, GO_REF:0000107 NCBI chr19:39,406,847...39,409,407
Ensembl chr19:39,406,847...39,409,412
JBrowse link
mRNA cleavage involved in gene silencing by miRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGO1 argonaute RISC component 1 NOT IDA (PMID:15260970) BHF-UCL PMID:15260970 NCBI chr 1:35,869,761...35,930,532
Ensembl chr 1:35,869,808...35,930,532
JBrowse link
G AGO2 argonaute RISC catalytic component 2 IMP
IDA
(PMID:18771919)
(PMID:15260970), (PMID:17524464)
UniProtKB
BHF-UCL
PMID:15260970, PMID:17524464, PMID:18771919 NCBI chr 8:140,520,156...140,642,406
Ensembl chr 8:140,520,156...140,635,633
JBrowse link
G AGO3 argonaute RISC catalytic component 3 NOT IDA (PMID:15260970) BHF-UCL PMID:15260970 NCBI chr 1:35,925,683...36,072,500
Ensembl chr 1:35,930,718...36,072,500
JBrowse link
G AGO4 argonaute RISC component 4 NOT IDA (PMID:15260970) BHF-UCL PMID:15260970 NCBI chr 1:35,807,630...35,857,890
Ensembl chr 1:35,808,016...35,857,890
JBrowse link
G MIR196A1 microRNA 196a-1 ISO (MGI:MGI:3042528|PMID:15105502), (MGI:MGI:3510301|PMID:15361871) MGI PMID:15105502, PMID:15361871 MGI:MGI:3042528, MGI:MGI:3510301 NCBI chr17:48,632,490...48,632,559
Ensembl chr17:48,632,490...48,632,559
JBrowse link
G MIR196A2 microRNA 196a-2 ISO (MGI:MGI:3042528|PMID:15105502), (MGI:MGI:3510301|PMID:15361871) MGI PMID:15105502, PMID:15361871 MGI:MGI:3042528, MGI:MGI:3510301 NCBI chr12:53,991,738...53,991,847
Ensembl chr12:53,991,738...53,991,847
JBrowse link
G MIR196B microRNA 196b ISO (MGI:MGI:3042528|PMID:15105502) MGI PMID:15105502 MGI:MGI:3042528 NCBI chr 7:27,169,480...27,169,563
Ensembl chr 7:27,169,480...27,169,563
JBrowse link
G MOV10 Mov10 RISC complex RNA helicase IDA (PMID:16289642) UniProtKB PMID:16289642 NCBI chr 1:112,674,312...112,702,377
Ensembl chr 1:112,673,141...112,700,746
JBrowse link
negative regulation of gene silencing by miRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DND1 DND microRNA-mediated repression inhibitor 1 IDA
IBA
(PMID:18155131)
(PMID:21873635)
UniProtKB
GO_Central
PMID:18155131, PMID:21873635 NCBI chr 5:140,670,794...140,673,576
Ensembl chr 5:140,670,794...140,673,576
JBrowse link
G ELAVL1 ELAV like RNA binding protein 1 IGI
IMP
(PMID:27089893)
(PMID:26595526)
BHF-UCL
UniProtKB
PMID:26595526, PMID:27089893 NCBI chr19:7,958,573...8,005,641
Ensembl chr19:7,958,573...8,005,659
JBrowse link
G POU5F1 POU class 5 homeobox 1 IMP (PMID:19409607) UniProtKB PMID:19409607 NCBI chr 6:31,164,337...31,170,682
Ensembl chr 6:31,164,337...31,180,731
JBrowse link
G PPARG peroxisome proliferator activated receptor gamma IMP (PMID:28522568) BHF-UCL PMID:28522568 NCBI chr 3:12,287,368...12,434,344
Ensembl chr 3:12,287,368...12,434,356
JBrowse link
G TGFB1 transforming growth factor beta 1 IGI (PMID:22269326) BHF-UCL PMID:22269326 NCBI chr19:41,330,323...41,353,922
Ensembl chr19:41,301,587...41,353,922
JBrowse link
negative regulation of pre-miRNA processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCDIN3D BCDIN3 domain containing RNA methyltransferase IDA
IBA
(PMID:23063121)
(PMID:21873635)
UniProtKB
GO_Central
PMID:21873635, PMID:23063121 NCBI chr12:49,836,043...49,843,106
Ensembl chr12:49,836,043...49,843,106
JBrowse link
G LIN28B lin-28 homolog B IDA (PMID:18951094) CACAO PMID:18951094 NCBI chr 6:104,936,999...105,083,332
Ensembl chr 6:104,936,616...105,083,332
JBrowse link
negative regulation of primary miRNA processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IL6 interleukin 6 IGI (PMID:31507089) ARUK-UCL PMID:31507089 NCBI chr 7:22,725,889...22,732,002
Ensembl chr 7:22,725,884...22,732,002
JBrowse link
G LIN28B lin-28 homolog B IDA (PMID:18951094) CACAO PMID:18951094 NCBI chr 6:104,936,999...105,083,332
Ensembl chr 6:104,936,616...105,083,332
JBrowse link
G MECP2 methyl-CpG binding protein 2 ISO RGD PMID:24636259 RGD:12789709 NCBI chr  X:154,021,573...154,097,717
Ensembl chr  X:154,021,573...154,137,103
JBrowse link
G STAT3 signal transducer and activator of transcription 3 IMP (PMID:31507089) ARUK-UCL PMID:31507089 NCBI chr17:42,313,324...42,388,502
Ensembl chr17:42,313,324...42,388,482
Ensembl chr17:42,313,324...42,388,482
JBrowse link
negative regulation of production of miRNAs involved in gene silencing by miRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ESR1 estrogen receptor 1 IMP (PMID:20388878) BHF-UCL PMID:20388878 NCBI chr 6:151,654,148...152,129,619
Ensembl chr 6:151,656,691...152,129,619
JBrowse link
G NCOR1 nuclear receptor corepressor 1 IMP (PMID:20388878) BHF-UCL PMID:20388878 NCBI chr17:16,029,157...16,216,475
Ensembl chr17:16,029,157...16,218,185
JBrowse link
G NCOR2 nuclear receptor corepressor 2 IMP (PMID:20388878) BHF-UCL PMID:20388878 NCBI chr12:124,324,415...124,567,612
Ensembl chr12:124,324,415...124,567,589
JBrowse link
G PPP3CA protein phosphatase 3 catalytic subunit alpha IEA Ensembl GO_REF:0000107 NCBI chr 4:101,023,418...101,348,295
Ensembl chr 4:101,023,409...101,348,278
JBrowse link
G TERT telomerase reverse transcriptase TAS (PMID:26903137) ARUK-UCL PMID:26903137 NCBI chr 5:1,253,167...1,295,068
Ensembl chr 5:1,253,147...1,295,068
Ensembl chr 5:1,253,147...1,295,068
JBrowse link
G TGFB1 transforming growth factor beta 1 IGI (PMID:22269326) BHF-UCL PMID:22269326 NCBI chr19:41,330,323...41,353,922
Ensembl chr19:41,301,587...41,353,922
JBrowse link
G TNF tumor necrosis factor IDA (PMID:31124343), (PMID:31824476) ARUK-UCL PMID:31124343, PMID:31824476 NCBI chr 6:31,575,565...31,578,336
Ensembl chr 6:31,575,565...31,578,336
JBrowse link
G TP53 tumor protein p53 IEA Ensembl GO_REF:0000107 NCBI chr17:7,668,402...7,687,550
Ensembl chr17:7,661,779...7,687,538
Ensembl chr17:7,661,779...7,687,538
JBrowse link
G ZC3H10 zinc finger CCCH-type containing 10 IDA (PMID:28431233) UniProtKB PMID:28431233 NCBI chr12:56,118,266...56,127,514
Ensembl chr12:56,118,260...56,127,514
JBrowse link
G ZC3H12A zinc finger CCCH-type containing 12A IDA (PMID:22055188) UniProtKB PMID:22055188 NCBI chr 1:37,474,518...37,484,377
Ensembl chr 1:37,474,580...37,484,377
JBrowse link
G ZMPSTE24 zinc metallopeptidase STE24 IEA Ensembl GO_REF:0000107 NCBI chr 1:40,258,078...40,294,180
Ensembl chr 1:40,258,041...40,294,180
Ensembl chr 1:40,258,041...40,294,180
JBrowse link
positive regulation of gene silencing by miRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AJUBA ajuba LIM protein IMP
IBA
(PMID:20616046)
(PMID:21873635)
UniProtKB
GO_Central
PMID:20616046, PMID:21873635 NCBI chr14:22,971,177...22,982,551
Ensembl chr14:22,971,177...22,982,551
JBrowse link
G DHX9 DExH-box helicase 9 IMP (PMID:17531811) UniProtKB PMID:17531811 NCBI chr 1:182,839,347...182,887,982
Ensembl chr 1:182,839,347...182,887,982
JBrowse link
G FMR1 FMRP translational regulator 1 IDA (PMID:17057366) UniProtKB PMID:17057366 NCBI chr  X:147,911,919...147,951,125
Ensembl chr  X:147,911,951...147,951,125
Ensembl chr  X:147,911,951...147,951,125
JBrowse link
G FXR1 FMR1 autosomal homolog 1 IDA (PMID:17057366) UniProtKB PMID:17057366 NCBI chr 3:180,912,670...180,982,753
Ensembl chr 3:180,868,141...180,982,753
JBrowse link
G LIMD1 LIM domains containing 1 IMP
IBA
(PMID:20616046)
(PMID:21873635)
UniProtKB
GO_Central
PMID:20616046, PMID:21873635 NCBI chr 3:45,594,105...45,686,341
Ensembl chr 3:45,555,394...45,686,341
JBrowse link
G NFKB1 nuclear factor kappa B subunit 1 ISO PMID:24676391 BHF-UCL PMID:24676391 RGD:10400879 NCBI chr 4:102,501,266...102,617,302
Ensembl chr 4:102,501,331...102,617,302
JBrowse link
G PUM1 pumilio RNA binding family member 1 IDA (PMID:20818387), (PMID:22345517) UniProtKB PMID:20818387, PMID:22345517 NCBI chr 1:30,931,506...31,065,717
Ensembl chr 1:30,931,506...31,065,991
JBrowse link
G PUM2 pumilio RNA binding family member 2 IMP (PMID:22345517) UniProtKB PMID:22345517 NCBI chr 2:20,248,691...20,352,253
Ensembl chr 2:20,248,691...20,352,234
JBrowse link
G STAT3 signal transducer and activator of transcription 3 IDA (PMID:23820254) BHF-UCL PMID:23820254 NCBI chr17:42,313,324...42,388,502
Ensembl chr17:42,313,324...42,388,482
Ensembl chr17:42,313,324...42,388,482
JBrowse link
G TRIM71 tripartite motif containing 71 IEA Ensembl GO_REF:0000107 NCBI chr 3:32,817,997...32,897,824
Ensembl chr 3:32,817,997...32,897,824
JBrowse link
G WTIP WT1 interacting protein IMP
IBA
(PMID:20616046)
(PMID:21873635)
UniProtKB
GO_Central
PMID:20616046, PMID:21873635 NCBI chr19:34,481,758...34,512,304
Ensembl chr19:34,481,758...34,512,304
JBrowse link
G ZFP36 ZFP36 ring finger protein IMP (PMID:15766526) UniProtKB PMID:15766526 NCBI chr19:39,406,847...39,409,407
Ensembl chr19:39,406,847...39,409,412
JBrowse link
positive regulation of miRNA mediated inhibition of translation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGO2 argonaute RISC catalytic component 2 IDA (PMID:23409027) ParkinsonsUK-UCL PMID:23409027 NCBI chr 8:140,520,156...140,642,406
Ensembl chr 8:140,520,156...140,635,633
JBrowse link
G DDX6 DEAD-box helicase 6 IDA (PMID:27342281) UniProt PMID:27342281 NCBI chr11:118,747,763...118,791,696
Ensembl chr11:118,747,763...118,791,164
JBrowse link
G EIF4E2 eukaryotic translation initiation factor 4E family member 2 IDA (PMID:28487484) UniProt PMID:28487484 NCBI chr 2:232,550,689...232,583,644
Ensembl chr 2:232,550,674...232,583,644
JBrowse link
G EIF4ENIF1 eukaryotic translation initiation factor 4E nuclear import factor 1 IDA (PMID:24335285), (PMID:27342281), (PMID:28487484), (PMID:32354837) UniProt PMID:24335285, PMID:27342281, PMID:28487484, PMID:32354837 NCBI chr22:31,434,648...31,489,950
Ensembl chr22:31,436,977...31,496,108
JBrowse link
G EIF4G1 eukaryotic translation initiation factor 4 gamma 1 IDA (PMID:23409027) ParkinsonsUK-UCL PMID:23409027 NCBI chr 3:184,314,606...184,335,358
Ensembl chr 3:184,314,495...184,335,358
JBrowse link
G STAT3 signal transducer and activator of transcription 3 IDA (PMID:23820254) BHF-UCL PMID:23820254 NCBI chr17:42,313,324...42,388,502
Ensembl chr17:42,313,324...42,388,482
Ensembl chr17:42,313,324...42,388,482
JBrowse link
G TNRC6B trinucleotide repeat containing adaptor 6B IDA (PMID:32354837) UniProt PMID:32354837 NCBI chr22:40,044,834...40,335,808
Ensembl chr22:40,044,817...40,335,808
JBrowse link
positive regulation of production of miRNAs involved in gene silencing by miRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 IDA (PMID:18548003) BHF-UCL PMID:18548003 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761
JBrowse link
G DDX5 DEAD-box helicase 5 IMP (PMID:18548003) BHF-UCL PMID:18548003 NCBI chr17:64,498,254...64,506,866
Ensembl chr17:64,498,254...64,508,199
JBrowse link
G EGFR epidermal growth factor receptor IMP (PMID:21673316) BHF-UCL PMID:21673316 NCBI chr 7:55,019,017...55,211,628
Ensembl chr 7:55,019,017...55,211,628
JBrowse link
G IL6 interleukin 6 IDA (PMID:27252421) ARUK-UCL PMID:27252421 NCBI chr 7:22,725,889...22,732,002
Ensembl chr 7:22,725,884...22,732,002
JBrowse link
G LIN28A lin-28 homolog A ISS BHF-UCL GO_REF:0000024 NCBI chr 1:26,410,778...26,429,728
Ensembl chr 1:26,410,817...26,429,728
JBrowse link
G MAP2K1 mitogen-activated protein kinase kinase 1 IMP (PMID:24375836) BHF-UCL PMID:24375836 NCBI chr15:66,386,912...66,491,544
Ensembl chr15:66,386,817...66,492,312
Ensembl chr15:66,386,817...66,492,312
JBrowse link
G MAP2K2 mitogen-activated protein kinase kinase 2 IMP (PMID:24375836) BHF-UCL PMID:24375836 NCBI chr19:4,090,321...4,124,184
Ensembl chr19:4,090,321...4,124,129
Ensembl chr19:4,090,321...4,124,129
JBrowse link
G MYCN MYCN proto-oncogene, bHLH transcription factor IC (PMID:21796614) BHF-UCL PMID:21796614 NCBI chr 2:15,940,550...15,947,004
Ensembl chr 2:15,940,550...15,947,007
JBrowse link
G MYOCD myocardin IEA Ensembl GO_REF:0000107 NCBI chr17:12,665,890...12,768,949
Ensembl chr17:12,665,890...12,768,949
JBrowse link
G NR2F1 nuclear receptor subfamily 2 group F member 1 ISO (MGI:MGI:5574156|PMID:24349493) MGI PMID:24349493 MGI:MGI:5574156 NCBI chr 5:93,583,222...93,594,613
Ensembl chr 5:93,583,222...93,594,611
JBrowse link
G RIPK1 receptor interacting serine/threonine kinase 1 IDA (PMID:26020802) ARUK-UCL PMID:26020802 NCBI chr 6:3,063,967...3,115,187
Ensembl chr 6:3,063,991...3,115,187
JBrowse link
G TGFB1 transforming growth factor beta 1 IDA (PMID:18548003) BHF-UCL PMID:18548003 NCBI chr19:41,330,323...41,353,922
Ensembl chr19:41,301,587...41,353,922
JBrowse link
G TP53 tumor protein p53 IDA
IMP
(PMID:26100857)
(PMID:22578566)
BHF-UCL
ARUK-UCL
PMID:22578566, PMID:26100857 NCBI chr17:7,668,402...7,687,550
Ensembl chr17:7,661,779...7,687,538
Ensembl chr17:7,661,779...7,687,538
JBrowse link
pre-miRNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RAN RAN, member RAS oncogene family IC (PMID:14681208) BHF-UCL PMID:14681208 NCBI chr12:130,871,879...130,877,678
Ensembl chr12:130,872,037...130,877,678
JBrowse link
G XPO5 exportin 5 IMP
NAS
IDA
(PMID:14681208)
(PMID:19965479)
(PMID:15613540)
BHF-UCL
UniProtKB
PMID:14681208, PMID:15613540, PMID:19965479 NCBI chr 6:43,522,334...43,576,038
Ensembl chr 6:43,522,334...43,576,038
JBrowse link
pre-miRNA processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAR adenosine deaminase RNA specific IDA (PMID:23622242) MGI PMID:23622242 NCBI chr 1:154,582,057...154,627,997
Ensembl chr 1:154,582,057...154,628,013
JBrowse link
G AGO1 argonaute RISC component 1 IDA (PMID:19966796) BHF-UCL PMID:19966796 NCBI chr 1:35,869,761...35,930,532
Ensembl chr 1:35,869,808...35,930,532
JBrowse link
G AGO2 argonaute RISC catalytic component 2 IDA (PMID:16424907), (PMID:17671087), (PMID:18178619), (PMID:19966796) BHF-UCL PMID:16424907, PMID:17671087, PMID:18178619, PMID:19966796 NCBI chr 8:140,520,156...140,642,406
Ensembl chr 8:140,520,156...140,635,633
JBrowse link
G AGO3 argonaute RISC catalytic component 3 IDA (PMID:19966796) BHF-UCL PMID:19966796 NCBI chr 1:35,925,683...36,072,500
Ensembl chr 1:35,930,718...36,072,500
JBrowse link
G AGO4 argonaute RISC component 4 IDA (PMID:19966796) BHF-UCL PMID:19966796 NCBI chr 1:35,807,630...35,857,890
Ensembl chr 1:35,808,016...35,857,890
JBrowse link
G DICER1 dicer 1, ribonuclease III IDA
IBA
(PMID:15973356), (PMID:16357216), (PMID:18178619), (PMID:23661684), (PMID:25549615)
(PMID:21873635)
UniProtKB
GO_Central
PMID:15973356, PMID:16357216, PMID:18178619, PMID:21873635, PMID:23661684, PMID:25549615 NCBI chr14:95,086,228...95,158,263
Ensembl chr14:95,086,228...95,158,010
JBrowse link
G DROSHA drosha ribonuclease III IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:31,400,494...31,532,142
Ensembl chr 5:31,400,497...31,532,196
JBrowse link
G LIN28A lin-28 homolog A IMP (PMID:18951094), (PMID:19703396) UniProtKB PMID:18951094, PMID:19703396 NCBI chr 1:26,410,778...26,429,728
Ensembl chr 1:26,410,817...26,429,728
JBrowse link
G LIN28B lin-28 homolog B IMP (PMID:19703396) UniProtKB PMID:19703396 NCBI chr 6:104,936,999...105,083,332
Ensembl chr 6:104,936,616...105,083,332
JBrowse link
G MRPL44 mitochondrial ribosomal protein L44 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:223,950,846...223,967,714
Ensembl chr 2:223,957,463...223,967,714
JBrowse link
G PRKRA protein activator of interferon induced protein kinase EIF2AK2 IDA (PMID:16424907), (PMID:23661684) BHF-UCL PMID:16424907, PMID:23661684 NCBI chr 2:178,431,414...178,451,175
Ensembl chr 2:178,431,414...178,451,512
JBrowse link
G TARBP2 TARBP2 subunit of RISC loading complex IDA (PMID:15973356), (PMID:16357216), (PMID:16424907), (PMID:18178619), (PMID:23661684) UniProtKB PMID:15973356, PMID:16357216, PMID:16424907, PMID:18178619, PMID:23661684 NCBI chr12:53,500,923...53,506,431
Ensembl chr12:53,500,921...53,506,431
JBrowse link
G TUT4 terminal uridylyl transferase 4 IMP
IBA
IDA
(PMID:19703396)
(PMID:21873635)
(PMID:25979828)
UniProtKB
GO_Central
PMID:19703396, PMID:21873635, PMID:25979828 NCBI chr 1:52,423,275...52,553,463
Ensembl chr 1:52,408,282...52,553,487
JBrowse link
G TUT7 terminal uridylyl transferase 7 IDA
IBA
(PMID:25979828)
(PMID:21873635)
UniProtKB
GO_Central
PMID:21873635, PMID:25979828 NCBI chr 9:86,287,733...86,354,497
Ensembl chr 9:86,287,733...86,354,454
JBrowse link
primary miRNA methylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G METTL3 methyltransferase like 3 IDA
IBA
(PMID:25799998)
(PMID:21873635)
UniProtKB
GO_Central
PMID:21873635, PMID:25799998 NCBI chr14:21,498,138...21,511,340
Ensembl chr14:21,498,133...21,511,342
JBrowse link
primary miRNA processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DDX3X DEAD-box helicase 3 X-linked ISO (MGI:MGI:6108693|PMID:28819115) MGI PMID:28819115 MGI:MGI:6108693 NCBI chr  X:41,333,308...41,364,472
Ensembl chr  X:41,333,348...41,364,472
Ensembl chr  X:41,333,348...41,364,472
JBrowse link
G DGCR8 DGCR8 microprocessor complex subunit IDA
IBA
(PMID:15531877), (PMID:15574589), (PMID:24449907), (PMID:24910438)
(PMID:21873635)
MGI
GO_Central
PMID:15531877, PMID:15574589, PMID:21873635, PMID:24449907, PMID:24910438 NCBI chr22:20,080,241...20,111,872
Ensembl chr22:20,080,232...20,111,877
JBrowse link
G DROSHA drosha ribonuclease III IMP
IBA
IDA
(PMID:14508493)
(PMID:21873635)
(PMID:14508493), (PMID:15574589)
WormBase
GO_Central
PMID:14508493, PMID:15574589, PMID:21873635 NCBI chr 5:31,400,494...31,532,142
Ensembl chr 5:31,400,497...31,532,196
JBrowse link
G HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 IDA (PMID:26321680) UniProtKB PMID:26321680 NCBI chr 7:26,189,920...26,200,775
Ensembl chr 7:26,173,057...26,201,529
JBrowse link
G METTL3 methyltransferase like 3 IDA (PMID:25799998) UniProtKB PMID:25799998 NCBI chr14:21,498,138...21,511,340
Ensembl chr14:21,498,133...21,511,342
JBrowse link
G MRPL44 mitochondrial ribosomal protein L44 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:223,950,846...223,967,714
Ensembl chr 2:223,957,463...223,967,714
JBrowse link
G PUS10 pseudouridine synthase 10 IDA (PMID:31819270) UniProt PMID:31819270 NCBI chr 2:60,940,218...61,019,693
Ensembl chr 2:60,940,222...61,018,259
JBrowse link
G SMAD1 SMAD family member 1 TAS (PMID:19018011) BHF-UCL PMID:19018011 NCBI chr 4:145,481,306...145,559,176
Ensembl chr 4:145,481,194...145,559,176
JBrowse link
G SMAD2 SMAD family member 2 TAS (PMID:19018011) BHF-UCL PMID:19018011 NCBI chr18:47,808,957...47,931,188
Ensembl chr18:47,808,957...47,931,146
JBrowse link
G SMAD3 SMAD family member 3 TAS (PMID:19018011) BHF-UCL PMID:19018011 NCBI chr15:67,065,602...67,195,195
Ensembl chr15:67,063,763...67,195,169
JBrowse link
G SRRT serrate, RNA effector molecule IMP
IBA
(PMID:19632182)
(PMID:21873635)
UniProtKB
GO_Central
PMID:19632182, PMID:21873635 NCBI chr 7:100,874,971...100,888,664
Ensembl chr 7:100,875,103...100,888,664
JBrowse link
production of miRNAs involved in gene silencing by miRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAR adenosine deaminase RNA specific ISO (MGI:MGI:5495061|PMID:23622242) MGI PMID:23622242 MGI:MGI:5495061 NCBI chr 1:154,582,057...154,627,997
Ensembl chr 1:154,582,057...154,628,013
JBrowse link
G AGO1 argonaute RISC component 1 IMP (PMID:22795694) BHF-UCL PMID:22795694 NCBI chr 1:35,869,761...35,930,532
Ensembl chr 1:35,869,808...35,930,532
JBrowse link
G AGO2 argonaute RISC catalytic component 2 IDA (PMID:19966796), (PMID:23661684) BHF-UCL PMID:19966796, PMID:23661684 NCBI chr 8:140,520,156...140,642,406
Ensembl chr 8:140,520,156...140,635,633
JBrowse link
G AGO3 argonaute RISC catalytic component 3 IMP (PMID:22795694) BHF-UCL PMID:22795694 NCBI chr 1:35,925,683...36,072,500
Ensembl chr 1:35,930,718...36,072,500
JBrowse link
G AGO4 argonaute RISC component 4 IMP (PMID:22795694) BHF-UCL PMID:22795694 NCBI chr 1:35,807,630...35,857,890
Ensembl chr 1:35,808,016...35,857,890
JBrowse link
G DICER1 dicer 1, ribonuclease III ISS
IMP
IDA
(PMID:23322395), (PMID:26435691)
(PMID:15973356), (PMID:23661684)
BHF-UCL
ARUK-UCL
UniProtKB
PMID:15973356, PMID:23322395, PMID:23661684, PMID:26435691 GO_REF:0000024 NCBI chr14:95,086,228...95,158,263
Ensembl chr14:95,086,228...95,158,010
JBrowse link
G PRKRA protein activator of interferon induced protein kinase EIF2AK2 IDA (PMID:23661684) BHF-UCL PMID:23661684 NCBI chr 2:178,431,414...178,451,175
Ensembl chr 2:178,431,414...178,451,512
JBrowse link
G PUM1 pumilio RNA binding family member 1 IMP
IBA
(PMID:28431233)
(PMID:21873635)
UniProtKB
GO_Central
PMID:21873635, PMID:28431233 NCBI chr 1:30,931,506...31,065,717
Ensembl chr 1:30,931,506...31,065,991
JBrowse link
G PUM2 pumilio RNA binding family member 2 IMP
IBA
(PMID:28431233)
(PMID:21873635)
UniProtKB
GO_Central
PMID:21873635, PMID:28431233 NCBI chr 2:20,248,691...20,352,253
Ensembl chr 2:20,248,691...20,352,234
JBrowse link
G RBM3 RNA binding motif protein 3 ISO (MGI:MGI:3530692|PMID:15684048) MGI PMID:15684048 MGI:MGI:3530692 NCBI chr  X:48,574,479...48,581,162
Ensembl chr  X:48,574,449...48,581,162
JBrowse link
G SNIP1 Smad nuclear interacting protein 1 IMP
IBA
(PMID:18632581)
(PMID:21873635)
UniProtKB
GO_Central
PMID:18632581, PMID:21873635 NCBI chr 1:37,534,449...37,554,293
Ensembl chr 1:37,534,449...37,554,293
JBrowse link
G SPOUT1 SPOUT domain containing methyltransferase 1 IMP
IBA
(PMID:28431233)
(PMID:21873635)
UniProtKB
GO_Central
PMID:21873635, PMID:28431233 NCBI chr 9:128,819,651...128,833,309
Ensembl chr 9:128,819,651...128,829,794
JBrowse link
G TARBP2 TARBP2 subunit of RISC loading complex IDA (PMID:15973356), (PMID:23661684) UniProtKB PMID:15973356, PMID:23661684 NCBI chr12:53,500,923...53,506,431
Ensembl chr12:53,500,921...53,506,431
JBrowse link
G TRIM71 tripartite motif containing 71 IMP (PMID:28431233) UniProtKB PMID:28431233 NCBI chr 3:32,817,997...32,897,824
Ensembl chr 3:32,817,997...32,897,824
JBrowse link
G ZC3H7A zinc finger CCCH-type containing 7A IMP
IBA
(PMID:28431233)
(PMID:21873635)
UniProtKB
GO_Central
PMID:21873635, PMID:28431233 NCBI chr16:11,750,588...11,797,258
Ensembl chr16:11,750,586...11,797,258
JBrowse link
G ZC3H7B zinc finger CCCH-type containing 7B IMP
IBA
(PMID:28431233)
(PMID:21873635)
UniProtKB
GO_Central
PMID:21873635, PMID:28431233 NCBI chr22:41,301,525...41,360,147
Ensembl chr22:41,301,525...41,360,147
JBrowse link
regulation of gene silencing by miRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AAAS aladin WD repeat nucleoporin TAS Reactome Reactome:R-HSA-5578749 NCBI chr12:53,307,456...53,321,610
Ensembl chr12:53,307,456...53,324,864
JBrowse link
G AGO1 argonaute RISC component 1 TAS Reactome Reactome:R-HSA-5578749 NCBI chr 1:35,869,761...35,930,532
Ensembl chr 1:35,869,808...35,930,532
JBrowse link
G AGO2 argonaute RISC catalytic component 2 TAS Reactome Reactome:R-HSA-5578749 NCBI chr 8:140,520,156...140,642,406
Ensembl chr 8:140,520,156...140,635,633
JBrowse link
G EIF4G1 eukaryotic translation initiation factor 4 gamma 1 TAS (PMID:25765080) ParkinsonsUK-UCL PMID:25765080 NCBI chr 3:184,314,606...184,335,358
Ensembl chr 3:184,314,495...184,335,358
JBrowse link
G FMR1 FMRP translational regulator 1 IMP (PMID:25464849) UniProtKB PMID:25464849 NCBI chr  X:147,911,919...147,951,125
Ensembl chr  X:147,911,951...147,951,125
Ensembl chr  X:147,911,951...147,951,125
JBrowse link
G H3-3A H3.3 histone A TAS Reactome Reactome:R-HSA-5578749 NCBI chr 1:226,061,831...226,072,019
Ensembl chr 1:226,061,851...226,073,212
Ensembl chr 1:226,061,851...226,073,212
JBrowse link
G H3-3B H3.3 histone B TAS Reactome Reactome:R-HSA-5578749 NCBI chr17:75,776,434...75,779,779
Ensembl chr17:75,776,434...75,785,893
JBrowse link
G H3C1 H3 clustered histone 1 TAS Reactome Reactome:R-HSA-5578749 NCBI chr 6:26,020,451...26,020,958
Ensembl chr 6:26,020,490...26,020,900
Ensembl chr 6:26,020,490...26,020,900
JBrowse link
G H3C10 H3 clustered histone 10 TAS Reactome Reactome:R-HSA-5578749 NCBI chr 6:27,810,051...27,810,536
Ensembl chr 6:27,810,064...27,811,300
JBrowse link
G H3C11 H3 clustered histone 11 TAS Reactome Reactome:R-HSA-5578749 NCBI chr 6:27,871,845...27,872,346
Ensembl chr 6:27,871,905...27,872,315
Ensembl chr 6:27,871,905...27,872,315
JBrowse link
G H3C12 H3 clustered histone 12 TAS Reactome Reactome:R-HSA-5578749 NCBI chr 6:27,890,315...27,890,826
Ensembl chr 6:27,890,382...27,893,106
Ensembl chr 6:27,890,382...27,893,106
JBrowse link
G H3C13 H3 clustered histone 13 TAS Reactome Reactome:R-HSA-5578749 NCBI chr 1:149,813,225...149,813,693
Ensembl chr 1:149,813,271...149,813,681
Ensembl chr 1:149,813,271...149,813,681
JBrowse link
G H3C14 H3 clustered histone 14 TAS Reactome Reactome:R-HSA-5578749 NCBI chr 1:149,840,687...149,841,208
Ensembl chr 1:149,839,538...149,841,193
JBrowse link
G H3C15 H3 clustered histone 15 TAS Reactome Reactome:R-HSA-5578749 NCBI chr 1:149,852,608...149,853,125
Ensembl chr 1:149,852,619...149,854,274
JBrowse link
G H3C2 H3 clustered histone 2 TAS Reactome Reactome:R-HSA-5578749 NCBI chr 6:26,031,589...26,032,099
Ensembl chr 6:26,031,594...26,032,099
Ensembl chr 6:26,031,594...26,032,099
JBrowse link
G H3C3 H3 clustered histone 3 TAS Reactome Reactome:R-HSA-5578749 NCBI chr 6:26,045,384...26,045,869
Ensembl chr 6:26,045,411...26,045,869
Ensembl chr 6:26,045,411...26,045,869
JBrowse link
G H3C4 H3 clustered histone 4 TAS Reactome Reactome:R-HSA-5578749 NCBI chr 6:26,196,784...26,199,293
Ensembl chr 6:26,196,840...26,197,250
Ensembl chr 6:26,196,840...26,197,250
JBrowse link
G H3C6 H3 clustered histone 6 TAS Reactome Reactome:R-HSA-5578749 NCBI chr 6:26,224,178...26,227,473
Ensembl chr 6:26,224,199...26,227,473
JBrowse link
G H3C7 H3 clustered histone 7 TAS Reactome Reactome:R-HSA-5578749 NCBI chr 6:26,250,142...26,250,635
Ensembl chr 6:26,250,195...26,250,605
Ensembl chr 6:26,250,195...26,250,605
JBrowse link
G H3C8 H3 clustered histone 8 TAS Reactome Reactome:R-HSA-5578749 NCBI chr 6:26,270,918...26,271,413
Ensembl chr 6:26,269,405...26,271,815
JBrowse link
G H4-16 H4 histone 16 TAS Reactome Reactome:R-HSA-5578749 NCBI chr12:14,770,720...14,771,131
Ensembl chr12:14,767,999...14,771,131
JBrowse link
G H4C1 H4 clustered histone 1 TAS Reactome Reactome:R-HSA-5578749 NCBI chr 6:26,021,649...26,022,050
Ensembl chr 6:26,021,679...26,021,990
Ensembl chr 6:26,021,679...26,021,990
JBrowse link
G H4C11 H4 clustered histone 11 TAS Reactome Reactome:R-HSA-5578749 NCBI chr 6:27,824,092...27,824,480
Ensembl chr 6:27,824,108...27,824,480
Ensembl chr 6:27,824,108...27,824,480
JBrowse link
G H4C12 H4 clustered histone 12 TAS Reactome Reactome:R-HSA-5578749 NCBI chr 6:27,831,174...27,831,560
Ensembl chr 6:27,831,216...27,831,527
Ensembl chr 6:27,831,216...27,831,527
JBrowse link
G H4C13 H4 clustered histone 13 TAS Reactome Reactome:R-HSA-5578749 NCBI chr 6:27,873,148...27,873,534
Ensembl chr 6:27,873,199...27,873,510
Ensembl chr 6:27,873,199...27,873,510
JBrowse link
G H4C14 H4 clustered histone 14 TAS Reactome Reactome:R-HSA-5578749 NCBI chr 1:149,832,657...149,833,052
Ensembl chr 1:149,832,659...149,839,767
JBrowse link
G H4C15 H4 clustered histone 15 TAS Reactome Reactome:R-HSA-5578749 NCBI chr 1:149,853,262...149,861,159
Ensembl chr 1:149,854,045...149,861,210
JBrowse link
G H4C2 H4 clustered histone 2 TAS Reactome Reactome:R-HSA-5578749 NCBI chr 6:26,026,896...26,027,283
Ensembl chr 6:26,026,815...26,027,252
JBrowse link
G H4C3 H4 clustered histone 3 TAS Reactome Reactome:R-HSA-5578749 NCBI chr 6:26,103,933...26,104,337
Ensembl chr 6:26,103,876...26,104,310
Ensembl chr 6:26,103,876...26,104,310
JBrowse link
G H4C4 H4 clustered histone 4 TAS Reactome Reactome:R-HSA-5578749 NCBI chr 6:26,188,710...26,189,112
Ensembl chr 6:26,188,765...26,189,076
Ensembl chr 6:26,188,765...26,189,076
JBrowse link
G H4C5 H4 clustered histone 5 TAS Reactome Reactome:R-HSA-5578749 NCBI chr 6:26,204,610...26,205,021
Ensembl chr 6:26,204,552...26,206,038
JBrowse link
G H4C6 H4 clustered histone 6 TAS Reactome Reactome:R-HSA-5578749 NCBI chr 6:26,240,393...26,240,793
Ensembl chr 6:26,240,426...26,240,737
Ensembl chr 6:26,240,426...26,240,737
JBrowse link
G H4C8 H4 clustered histone 8 TAS Reactome Reactome:R-HSA-5578749 NCBI chr 6:26,285,126...26,285,534
Ensembl chr 6:26,277,609...26,285,638
JBrowse link
G H4C9 H4 clustered histone 9 TAS Reactome Reactome:R-HSA-5578749 NCBI chr 6:27,139,282...27,139,678
Ensembl chr 6:27,138,588...27,139,881
JBrowse link
G IPO8 importin 8 TAS Reactome Reactome:R-HSA-5578749 NCBI chr12:30,628,981...30,695,986
Ensembl chr12:30,628,988...30,695,869
JBrowse link
G LIN28A lin-28 homolog A ISO (MGI:MGI:4438512|PMID:19898466) MGI PMID:19898466 MGI:MGI:4438512 NCBI chr 1:26,410,778...26,429,728
Ensembl chr 1:26,410,817...26,429,728
JBrowse link
G MAEL maelstrom spermatogenic transposon silencer IEA InterPro GO_REF:0000002 NCBI chr 1:166,921,121...167,022,214
Ensembl chr 1:166,975,582...167,022,214
JBrowse link
G MIR154 microRNA 154 ISO (MGI:MGI:5705446|PMID:25959411) MGI PMID:25959411 MGI:MGI:5705446 NCBI chr14:101,059,755...101,059,838
Ensembl chr14:101,059,755...101,059,838
JBrowse link
G MIRLET7A2 microRNA let-7a-2 ISO (MGI:MGI:4438512|PMID:19898466) MGI PMID:19898466 MGI:MGI:4438512 NCBI chr11:122,146,522...122,146,593
Ensembl chr11:122,146,522...122,146,593
JBrowse link
G NDC1 NDC1 transmembrane nucleoporin TAS Reactome Reactome:R-HSA-5578749 NCBI chr 1:53,765,478...53,838,296
Ensembl chr 1:53,765,478...53,838,463
JBrowse link
G NUP107 nucleoporin 107 TAS Reactome Reactome:R-HSA-5578749 NCBI chr12:68,686,971...68,745,809
Ensembl chr12:68,686,951...68,745,809
JBrowse link
G NUP133 nucleoporin 133 TAS Reactome Reactome:R-HSA-5578749 NCBI chr 1:229,440,259...229,508,342
Ensembl chr 1:229,440,259...229,508,341
JBrowse link
G NUP153 nucleoporin 153 TAS Reactome Reactome:R-HSA-5578749 NCBI chr 6:17,615,036...17,706,925
Ensembl chr 6:17,615,035...17,706,834
Ensembl chr 6:17,615,035...17,706,834
JBrowse link
G NUP155 nucleoporin 155 TAS Reactome Reactome:R-HSA-5578749 NCBI chr 5:37,288,137...37,371,106
Ensembl chr 5:37,288,137...37,371,106
JBrowse link
G NUP160 nucleoporin 160 TAS Reactome Reactome:R-HSA-5578749 NCBI chr11:47,778,083...47,848,544
Ensembl chr11:47,778,087...47,848,555
JBrowse link
G NUP188 nucleoporin 188 TAS Reactome Reactome:R-HSA-5578749 NCBI chr 9:128,947,699...129,007,096
Ensembl chr 9:128,947,699...129,007,096
JBrowse link
G NUP205 nucleoporin 205 TAS Reactome Reactome:R-HSA-5578749 NCBI chr 7:135,557,917...135,648,753
Ensembl chr 7:135,557,917...135,648,757
JBrowse link
G NUP210 nucleoporin 210 TAS Reactome Reactome:R-HSA-5578749 NCBI chr 3:13,316,235...13,420,322
Ensembl chr 3:13,316,235...13,420,322
JBrowse link
G NUP214 nucleoporin 214 TAS Reactome Reactome:R-HSA-5578749 NCBI chr 9:131,125,586...131,234,663
Ensembl chr 9:131,125,586...131,234,663
JBrowse link
G NUP35 nucleoporin 35 TAS Reactome Reactome:R-HSA-5578749 NCBI chr 2:183,117,480...183,161,680
Ensembl chr 2:183,117,513...183,161,680
JBrowse link
G NUP37 nucleoporin 37 TAS Reactome Reactome:R-HSA-5578749 NCBI chr12:102,073,103...102,120,131
Ensembl chr12:102,073,103...102,120,120
JBrowse link
G NUP42 nucleoporin 42 TAS Reactome Reactome:R-HSA-5578749 NCBI chr 7:23,181,298...23,201,011
Ensembl chr 7:23,181,841...23,201,011
JBrowse link
G NUP43 nucleoporin 43 TAS Reactome Reactome:R-HSA-5578749 NCBI chr 6:149,724,315...149,746,529
Ensembl chr 6:149,724,315...149,749,665
JBrowse link
G NUP50 nucleoporin 50 TAS Reactome Reactome:R-HSA-5578749 NCBI chr22:45,163,925...45,188,017
Ensembl chr22:45,163,925...45,188,017
JBrowse link
G NUP54 nucleoporin 54 TAS Reactome Reactome:R-HSA-5578749 NCBI chr 4:76,114,664...76,148,434
Ensembl chr 4:76,114,659...76,148,444
JBrowse link
G NUP58 nucleoporin 58 TAS Reactome Reactome:R-HSA-5578749 NCBI chr13:25,301,084...25,349,795
Ensembl chr13:25,301,556...25,349,800
JBrowse link
G NUP62 nucleoporin 62 TAS Reactome Reactome:R-HSA-5578749 NCBI chr19:49,906,825...49,929,504
Ensembl chr19:49,906,825...49,929,763
JBrowse link
G NUP85 nucleoporin 85 TAS Reactome Reactome:R-HSA-5578749 NCBI chr17:75,205,557...75,235,758
Ensembl chr17:75,205,659...75,235,758
JBrowse link
G NUP88 nucleoporin 88 TAS Reactome Reactome:R-HSA-5578749 NCBI chr17:5,384,833...5,419,662
Ensembl chr17:5,360,963...5,419,676
JBrowse link
G NUP93 nucleoporin 93 TAS Reactome Reactome:R-HSA-5578749 NCBI chr16:56,730,129...56,850,286
Ensembl chr16:56,730,118...56,850,286
JBrowse link
G NUP98 nucleoporin 98 and 96 precursor TAS Reactome Reactome:R-HSA-5578749 NCBI chr11:3,675,010...3,797,554
Ensembl chr11:3,671,083...3,797,792
JBrowse link
G POLR2A RNA polymerase II subunit A TAS Reactome Reactome:R-HSA-5578749 NCBI chr17:7,484,366...7,514,616
Ensembl chr17:7,484,366...7,514,616
Ensembl chr17:7,484,366...7,514,616
JBrowse link
G POLR2B RNA polymerase II subunit B TAS Reactome Reactome:R-HSA-5578749 NCBI chr 4:56,978,896...57,031,158
Ensembl chr 4:56,977,722...57,031,158
JBrowse link
G POLR2C RNA polymerase II subunit C TAS Reactome Reactome:R-HSA-5578749 NCBI chr16:57,462,679...57,472,009
Ensembl chr16:57,462,660...57,472,009
JBrowse link
G POLR2D RNA polymerase II subunit D TAS Reactome Reactome:R-HSA-5578749 NCBI chr 2:127,843,553...127,858,155
Ensembl chr 2:127,843,553...127,858,155
JBrowse link
G POLR2E RNA polymerase II, I and III subunit E TAS Reactome Reactome:R-HSA-5578749 NCBI chr19:1,086,574...1,095,387
Ensembl chr19:1,086,574...1,095,380
JBrowse link
G POLR2F RNA polymerase II, I and III subunit F TAS Reactome Reactome:R-HSA-5578749 NCBI chr22:37,953,663...38,041,915
Ensembl chr22:37,952,607...38,041,915
JBrowse link
G POLR2G RNA polymerase II subunit G TAS Reactome Reactome:R-HSA-5578749 NCBI chr11:62,761,580...62,766,710
Ensembl chr11:62,761,565...62,766,710
JBrowse link
G POLR2H RNA polymerase II, I and III subunit H TAS Reactome Reactome:R-HSA-5578749 NCBI chr 3:184,361,710...184,368,594
Ensembl chr 3:184,361,718...184,368,596
JBrowse link
G POLR2I RNA polymerase II subunit I TAS Reactome Reactome:R-HSA-5578749 NCBI chr19:36,113,709...36,114,875
Ensembl chr19:36,113,709...36,115,213
JBrowse link
G POLR2J RNA polymerase II subunit J TAS Reactome Reactome:R-HSA-5578749 NCBI chr 7:102,473,128...102,478,934
Ensembl chr 7:102,473,118...102,478,907
JBrowse link
G POLR2K RNA polymerase II, I and III subunit K TAS Reactome Reactome:R-HSA-5578749 NCBI chr 8:100,150,636...100,154,003
Ensembl chr 8:100,150,623...100,154,003
JBrowse link
G POLR2L RNA polymerase II, I and III subunit L TAS Reactome Reactome:R-HSA-5578749 NCBI chr11:839,721...842,529
Ensembl chr11:837,356...842,529
JBrowse link
G POM121 POM121 transmembrane nucleoporin TAS Reactome Reactome:R-HSA-5578749 NCBI chr 7:72,879,335...72,951,459
Ensembl chr 7:72,879,365...72,951,440
JBrowse link
G POM121C POM121 transmembrane nucleoporin C TAS Reactome Reactome:R-HSA-5578749 NCBI chr 7:75,416,786...75,486,299
Ensembl chr 7:75,416,786...75,486,299
JBrowse link
G PUM1 pumilio RNA binding family member 1 TAS (PMID:18776931) UniProtKB PMID:18776931 NCBI chr 1:30,931,506...31,065,717
Ensembl chr 1:30,931,506...31,065,991
JBrowse link
G PUM2 pumilio RNA binding family member 2 TAS (PMID:18776931) UniProtKB PMID:18776931 NCBI chr 2:20,248,691...20,352,253
Ensembl chr 2:20,248,691...20,352,234
JBrowse link
G RAE1 ribonucleic acid export 1 TAS Reactome Reactome:R-HSA-5578749 NCBI chr20:57,351,239...57,379,202
Ensembl chr20:57,351,223...57,379,211
JBrowse link
G RANBP2 RAN binding protein 2 TAS Reactome Reactome:R-HSA-5578749 NCBI chr 2:108,719,446...108,785,809
Ensembl chr 2:108,719,482...108,785,809
JBrowse link
G SEC13 SEC13 homolog, nuclear pore and COPII coat complex component TAS Reactome Reactome:R-HSA-5578749 NCBI chr 3:10,300,931...10,321,112
Ensembl chr 3:10,293,131...10,321,112
JBrowse link
G SEH1L SEH1 like nucleoporin TAS Reactome Reactome:R-HSA-5578749 NCBI chr18:12,947,988...12,987,665
Ensembl chr18:12,947,133...12,987,536
JBrowse link
G TNRC6A trinucleotide repeat containing adaptor 6A TAS Reactome Reactome:R-HSA-5578749 NCBI chr16:24,610,205...24,826,223
Ensembl chr16:24,610,209...24,827,632
JBrowse link
G TNRC6C trinucleotide repeat containing adaptor 6C ISO (MGI:MGI:5315650|PMID:22187428) MGI PMID:22187428 MGI:MGI:5315650 NCBI chr17:77,958,853...78,108,835
Ensembl chr17:77,959,240...78,108,835
JBrowse link
G TPR translocated promoter region, nuclear basket protein TAS Reactome Reactome:R-HSA-5578749 NCBI chr 1:186,311,652...186,375,253
Ensembl chr 1:186,311,652...186,375,693
JBrowse link
G TRIM71 tripartite motif containing 71 ISS UniProtKB GO_REF:0000024 NCBI chr 3:32,817,997...32,897,824
Ensembl chr 3:32,817,997...32,897,824
JBrowse link
regulation of production of miRNAs involved in gene silencing by miRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TARBP2 TARBP2 subunit of RISC loading complex IEA InterPro
Ensembl
GO_REF:0000002, GO_REF:0000107 NCBI chr12:53,500,923...53,506,431
Ensembl chr12:53,500,921...53,506,431
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18670
    cellular process 17686
      gene silencing 351
        gene silencing by RNA 251
          post-transcriptional gene silencing by RNA 224
            gene silencing by miRNA 216
              deadenylation involved in gene silencing by miRNA 0
              mRNA cleavage involved in gene silencing by miRNA 8
              miRNA loading onto RISC involved in gene silencing by miRNA 7
              miRNA mediated inhibition of translation + 24
              negative regulation of gene silencing by miRNA + 20
              positive regulation of gene silencing by miRNA + 31
              pre-miRNA export from nucleus 2
              production of miRNAs involved in gene silencing by miRNA + 55
              regulation of gene silencing by miRNA + 125
Path 2
Term Annotations click to browse term
  biological_process 18670
    metabolic process 12302
      organic substance metabolic process 11737
        macromolecule metabolic process 10194
          regulation of macromolecule metabolic process 6977
            regulation of gene expression 5307
              negative regulation of gene expression 2510
                gene silencing 351
                  posttranscriptional gene silencing 231
                    post-transcriptional gene silencing by RNA 224
                      gene silencing by miRNA 216
                        deadenylation involved in gene silencing by miRNA 0
                        mRNA cleavage involved in gene silencing by miRNA 8
                        miRNA loading onto RISC involved in gene silencing by miRNA 7
                        miRNA mediated inhibition of translation + 24
                        negative regulation of gene silencing by miRNA + 20
                        positive regulation of gene silencing by miRNA + 31
                        pre-miRNA export from nucleus 2
                        production of miRNAs involved in gene silencing by miRNA + 55
                        regulation of gene silencing by miRNA + 125
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.