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Pathways

ONTOLOGY REPORT - ANNOTATIONS


Term:hatching
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Accession:GO:0035188 term browser browse the term
Definition:The emergence of an immature organism from a protective structure.



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blastocyst hatching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap3 A-kinase anchoring protein 3 acts_upstream_of_or_within ISO (MGI:5913376|PMID:27869233) RGD PMID:27869233 MGI:5913376 NCBI chr 4:159,688,049...159,714,067
Ensembl chr 4:159,699,289...159,713,903
JBrowse link
G Ankrd7 ankyrin repeat domain 7 acts_upstream_of_or_within ISO (MGI:5913376|PMID:27869233) RGD PMID:27869233 MGI:5913376 NCBI chr 4:47,312,270...47,336,754
Ensembl chr 4:47,318,420...47,336,753
JBrowse link
G Arhgdig Rho GDP dissociation inhibitor gamma acts_upstream_of_or_within ISO (MGI:5913376|PMID:27869233) RGD PMID:27869233 MGI:5913376 NCBI chr10:15,219,049...15,221,257
Ensembl chr10:15,219,049...15,221,213
JBrowse link
G Asf1b anti-silencing function 1B histone chaperone acts_upstream_of_or_within ISO (MGI:5913376|PMID:27869233) RGD PMID:27869233 MGI:5913376 NCBI chr19:24,181,024...24,195,604
Ensembl chr19:24,181,028...24,195,549
JBrowse link
G Bcor BCL6 co-repressor acts_upstream_of_or_within ISO (MGI:5913376|PMID:27869233) RGD PMID:27869233 MGI:5913376 NCBI chr  X:10,609,756...10,729,613
Ensembl chr  X:10,687,732...10,729,613
JBrowse link
G C9h6orf141 similar to human chromosome 6 open reading frame 141 acts_upstream_of_or_within ISO (MGI:5913376|PMID:27869233) RGD PMID:27869233 MGI:5913376 NCBI chr 9:20,024,916...20,029,094
Ensembl chr 9:20,024,916...20,029,094
JBrowse link
G Ccdc24 coiled-coil domain containing 24 acts_upstream_of_or_within ISO (MGI:5913376|PMID:27869233) RGD PMID:27869233 MGI:5913376 NCBI chr 5:131,398,766...131,412,395
Ensembl chr 5:131,408,143...131,412,029
JBrowse link
G Ccdc62 coiled-coil domain containing 62 acts_upstream_of_or_within ISO (MGI:5913376|PMID:27869233) RGD PMID:27869233 MGI:5913376 NCBI chr12:32,623,170...32,659,912
Ensembl chr12:32,623,170...32,660,017
JBrowse link
G Cmtm3 CKLF-like MARVEL transmembrane domain containing 3 acts_upstream_of_or_within ISO (MGI:5913376|PMID:27869233) RGD PMID:27869233 MGI:5913376 NCBI chr19:622,563...630,721
Ensembl chr19:604,458...629,790
JBrowse link
G Coprs coordinator of PRMT5 and differentiation stimulator acts_upstream_of_or_within ISO (MGI:5913376|PMID:27869233) RGD PMID:27869233 MGI:5913376 NCBI chr16:75,721,264...75,726,375
Ensembl chr16:75,720,061...75,726,375
JBrowse link
G Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component acts_upstream_of_or_within ISO (MGI:5913376|PMID:27869233) RGD PMID:27869233 MGI:5913376 NCBI chr 1:165,137,277...165,167,303
Ensembl chr 1:165,137,215...165,167,303
JBrowse link
G Fbll1 fibrillarin-like 1 acts_upstream_of_or_within ISO (MGI:5913376|PMID:27869233) RGD PMID:27869233 MGI:5913376 NCBI chr10:20,258,656...20,260,299
Ensembl chr10:20,258,656...20,260,299
JBrowse link
G Grn granulin precursor acts_upstream_of_or_within ISO (MGI:3589098|PMID:15901638) RGD PMID:15901638 MGI:3589098 NCBI chr10:87,387,672...87,393,777
Ensembl chr10:87,387,638...87,393,775
JBrowse link
G Hcfc1 host cell factor C1 acts_upstream_of_or_within ISO (MGI:5913376|PMID:27869233) RGD PMID:27869233 MGI:5913376 NCBI chr  X:151,687,779...151,712,688
Ensembl chr  X:151,687,779...151,712,638
JBrowse link
G Hs3st6 heparan sulfate-glucosamine 3-sulfotransferase 6 acts_upstream_of_or_within ISO (MGI:5913376|PMID:27869233) RGD PMID:27869233 MGI:5913376 NCBI chr10:13,781,999...13,788,133
Ensembl chr10:13,781,993...13,788,133
JBrowse link
G Lpar6 lysophosphatidic acid receptor 6 acts_upstream_of_or_within ISO (MGI:5913376|PMID:27869233) RGD PMID:27869233 MGI:5913376 NCBI chr15:48,416,548...48,418,357
Ensembl chr15:48,416,544...48,422,331
JBrowse link
G Ndufa2 NADH:ubiquinone oxidoreductase subunit A2 acts_upstream_of_or_within ISO (MGI:5913376|PMID:27869233) RGD PMID:27869233 MGI:5913376 NCBI chr18:28,355,774...28,357,863
Ensembl chr18:28,355,774...28,358,076
JBrowse link
G Necab1 N-terminal EF-hand calcium binding protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5913376|PMID:27869233)
GO_REF:0000107
RGD
Ensembl
PMID:27869233 GO_REF:0000107 MGI:5913376 NCBI chr 5:28,357,859...28,578,642
Ensembl chr 5:28,357,859...28,578,642
Ensembl chr 5:28,357,859...28,578,642
JBrowse link
G Pemt phosphatidylethanolamine N-methyltransferase acts_upstream_of_or_within ISO (MGI:5913376|PMID:27869233) RGD PMID:27869233 MGI:5913376 NCBI chr10:44,775,910...44,849,990
Ensembl chr10:44,775,911...44,850,013
JBrowse link
G Phf6 PHD finger protein 6 acts_upstream_of_or_within ISO (MGI:5913376|PMID:27869233) RGD PMID:27869233 MGI:5913376 NCBI chr  X:132,656,658...132,699,720
Ensembl chr  X:132,656,672...132,699,127
JBrowse link
G Plpp4 phospholipid phosphatase 4 acts_upstream_of_or_within ISO (MGI:5913376|PMID:27869233) RGD PMID:27869233 MGI:5913376 NCBI chr 1:183,829,794...183,959,319
Ensembl chr 1:183,830,409...183,959,319
JBrowse link
G Ppp4r4 protein phosphatase 4, regulatory subunit 4 acts_upstream_of_or_within ISO (MGI:5913376|PMID:27869233) RGD PMID:27869233 MGI:5913376 NCBI chr 6:122,663,172...122,753,988
Ensembl chr 6:122,663,344...122,753,384
JBrowse link
G Prss29 serine protease 29 acts_upstream_of_or_within ISO MGI:2149951 (MGI:3703092|PMID:17156484) RGD PMID:17156484 MGI:3703092 NCBI chr10:14,337,315...14,341,038
Ensembl chr10:14,339,036...14,341,038
JBrowse link
G Rbbp8 RB binding protein 8, endonuclease acts_upstream_of_or_within ISO MGI:3577029 (MGI:3575978|PMID:15831459) RGD PMID:15831459 MGI:3575978 NCBI chr18:2,922,985...2,988,851
Ensembl chr18:2,921,286...2,988,846
JBrowse link
G Slc25a34 solute carrier family 25, member 34 acts_upstream_of_or_within ISO (MGI:5913376|PMID:27869233) RGD PMID:27869233 MGI:5913376 NCBI chr 5:153,932,081...153,936,854 JBrowse link
G Slc35e2b solute carrier family 35, member E2B acts_upstream_of_or_within ISO (MGI:5913376|PMID:27869233) RGD PMID:27869233 MGI:5913376 NCBI chr 5:166,185,166...166,211,055
Ensembl chr 5:166,185,166...166,207,021
JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within ISO MGI:2386105 (MGI:1929360|PMID:11163203) RGD PMID:11163203 MGI:1929360 NCBI chr 8:20,167,717...20,258,975
Ensembl chr 8:20,167,717...20,258,975
JBrowse link
G Smarcb1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 acts_upstream_of_or_within ISO MGI:2387974|MGI:2388033 (MGI:1932782|PMID:11263494), (MGI:1933896|PMID:11313485) RGD PMID:11263494 PMID:11313485 MGI:1932782 MGI:1933896 NCBI chr20:12,741,164...12,763,616
Ensembl chr20:12,741,477...12,763,620
JBrowse link
G Smim14 small integral membrane protein 14 acts_upstream_of_or_within ISO (MGI:5913376|PMID:27869233) RGD PMID:27869233 MGI:5913376 NCBI chr14:42,783,361...42,829,762
Ensembl chr14:42,783,332...42,829,760
JBrowse link
G St8sia6 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 acts_upstream_of_or_within ISO (MGI:5913376|PMID:27869233) RGD PMID:27869233 MGI:5913376 NCBI chr17:76,740,755...76,884,178
Ensembl chr17:76,745,224...76,884,299
JBrowse link
G Stmn3 stathmin 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5913376|PMID:27869233)
GO_REF:0000107
RGD
Ensembl
PMID:27869233 GO_REF:0000107 MGI:5913376 NCBI chr 3:168,416,810...168,424,946
Ensembl chr 3:168,416,810...168,425,056
JBrowse link
G Suds3 SDS3 homolog, SIN3A corepressor complex component acts_upstream_of_or_within ISO (MGI:5913376|PMID:27869233) RGD PMID:27869233 MGI:5913376 NCBI chr12:39,477,181...39,499,633
Ensembl chr12:39,477,568...39,499,628
JBrowse link
G Suv39h1 SUV39H1 histone lysine methyltransferase acts_upstream_of_or_within ISO (MGI:5913376|PMID:27869233) RGD PMID:27869233 MGI:5913376 NCBI chr  X:14,421,028...14,433,993
Ensembl chr  X:14,421,109...14,433,982
JBrowse link
G Suv39h1-ps1 SUV39H1 histone lysine methyltransferase, pseudogene 1 acts_upstream_of_or_within ISO (MGI:5913376|PMID:27869233) RGD PMID:27869233 MGI:5913376 NCBI chr  X:141,792,589...141,795,257 JBrowse link
G Tbl1xr1 TBL1X/Y related 1 acts_upstream_of_or_within ISO (MGI:5913376|PMID:27869233) RGD PMID:27869233 MGI:5913376 NCBI chr 2:104,788,950...104,929,055
Ensembl chr 2:104,801,721...104,929,055
JBrowse link
G Ube2a ubiquitin-conjugating enzyme E2A acts_upstream_of_or_within ISO (MGI:5913376|PMID:27869233) RGD PMID:27869233 MGI:5913376 NCBI chr  X:116,114,339...116,125,076
Ensembl chr  X:116,113,875...116,125,070
JBrowse link
G Zbed6 zinc finger, BED-type containing 6 acts_upstream_of_or_within ISO (MGI:5913376|PMID:27869233) RGD PMID:27869233 MGI:5913376 NCBI chr13:45,107,253...45,113,524
Ensembl chr13:45,071,718...45,114,009
JBrowse link
G Zfp14 ZFP14 zinc finger protein acts_upstream_of_or_within ISO (MGI:5913376|PMID:27869233) RGD PMID:27869233 MGI:5913376 NCBI chr 1:85,268,649...85,286,125
Ensembl chr 1:85,268,643...85,285,759
JBrowse link
G Zfp420 zinc finger protein 420 acts_upstream_of_or_within ISO (MGI:5913376|PMID:27869233) RGD PMID:27869233 MGI:5913376 NCBI chr 1:85,092,810...85,143,682
Ensembl chr 1:85,093,085...85,106,693
Ensembl chr 1:85,093,085...85,106,693
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19553
    multicellular organismal process 9177
      multicellular organism development 5184
        hatching 39
          blastocyst hatching 39
          hatching behavior 0
Path 2
Term Annotations click to browse term
  biological_process 19553
    developmental process 6909
      anatomical structure development 6435
        multicellular organism development 5184
          hatching 39
            blastocyst hatching 39
            hatching behavior 0
paths to the root