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ONTOLOGY REPORT - ANNOTATIONS

Term:forelimb morphogenesis
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Accession:GO:0035136 term browser browse the term
Definition:The process in which the anatomical structures of the forelimb are generated and organized. The forelimbs are the front limbs of an animal, e.g. the arms of a human.
Synonyms:narrow_synonym: arm morphogenesis
 alt_id: GO:0035140


show annotations for term's descendants           Sort by:
forelimb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ark2c arkadia C-terminal like ring finger ubiquitin ligase 2C acts_upstream_of_or_within ISO
IEA		 MGI:5516581 (PMID:23610558)
GO_REF:0000107		 RGD
Ensembl		 PMID:23610558 GO_REF:0000107 NCBI chr18:73,259,736...73,375,987
Ensembl chr18:70,989,731...71,100,836 		JBrowse link
G Fmn1 formin 1 acts_upstream_of_or_within ISO MGI:3718051 (PMID:17554679) RGD PMID:17554679 NCBI chr 3:100,101,103...100,485,652
Ensembl chr 3:100,134,549...100,479,220 		JBrowse link
G Gdf5 growth differentiation factor 5 acts_upstream_of_or_within ISO
IEA		 MGI:1855974 (PMID:8145850)
GO_REF:0000107		 RGD
Ensembl		 PMID:8145850 GO_REF:0000107 NCBI chr 3:144,454,316...144,458,508
Ensembl chr 3:144,454,338...144,458,612 		JBrowse link
G Hoxd10 homeo box D10 acts_upstream_of_or_within ISO
IEA		 MGI:96210 (PMID:10642795)
GO_REF:0000107		 RGD
Ensembl		 PMID:10642795 GO_REF:0000107 NCBI chr 3:59,594,516...59,597,725
Ensembl chr 3:59,594,516...59,597,725 		JBrowse link
G Hoxd9 homeo box D9 acts_upstream_of_or_within ISO
IEA		 MGI:96202 (PMID:10642795)
GO_REF:0000107		 RGD
Ensembl		 PMID:10642795 GO_REF:0000107 NCBI chr 3:59,600,575...59,602,755
Ensembl chr 3:59,600,575...59,602,754 		JBrowse link
G Nipbl NIPBL, cohesin loading factor involved_in ISO
IEA		 (PMID:15146186)
GO_REF:0000107		 RGD
Ensembl		 PMID:15146186 GO_REF:0000107 NCBI chr 2:57,399,443...57,586,770
Ensembl chr 2:57,399,445...57,565,899 		JBrowse link
G Sall1 spalt-like transcription factor 1 acts_upstream_of_or_within ISO MGI:109295 (PMID:19168674) RGD PMID:19168674 NCBI chr19:18,005,782...18,022,705
Ensembl chr19:18,007,503...18,022,705 		JBrowse link
G Sall3 spalt-like transcription factor 3 acts_upstream_of_or_within ISO MGI:1889585 (PMID:19168674) RGD PMID:19168674 NCBI chr18:74,406,066...74,425,974
Ensembl chr18:74,407,560...74,426,789 		JBrowse link
G Tbx3 T-box transcription factor 3 acts_upstream_of_or_within ISO
IEA		 (PMID:9207801)
GO_REF:0000107		 RGD
Ensembl		 PMID:9207801 GO_REF:0000107 NCBI chr12:36,879,924...36,894,849
Ensembl chr12:36,881,445...36,893,708 		JBrowse link
G Tbx5 T-box transcription factor 5 acts_upstream_of_or_within ISO
IEA		 (PMID:8988164), (PMID:8988165)
MGI:2387850 (PMID:15621531)
GO_REF:0000107		 RGD
Ensembl		 PMID:8988164 PMID:8988165 PMID:15621531 GO_REF:0000107 NCBI chr12:42,342,926...42,399,723
Ensembl chr12:36,688,014...36,734,885 		JBrowse link
G Tfap2a transcription factor AP-2 alpha acts_upstream_of_or_within ISO MGI:2176682 (PMID:9811866) RGD PMID:9811866 NCBI chr17:24,028,716...24,047,507
Ensembl chr17:24,024,432...24,047,507 		JBrowse link
G Tfap2b transcription factor AP-2 beta involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:21829553)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:21829553 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:21,786,251...21,816,054
Ensembl chr 9:21,786,258...21,814,520 		JBrowse link
G Wnt7a Wnt family member 7A acts_upstream_of_or_within ISO MGI:1857009 RGD MGI:48652 NCBI chr 4:123,863,108...123,908,981
Ensembl chr 4:123,863,108...123,908,981 		JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 acts_upstream_of_or_within ISO
IEA		 MGI:2182708 (PMID:10835630)
GO_REF:0000107		 RGD
Ensembl		 PMID:10835630 GO_REF:0000107 NCBI chr 8:48,989,376...49,177,011
Ensembl chr 8:48,994,566...49,177,011 		JBrowse link
embryonic forelimb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a2 aldehyde dehydrogenase 1 family, member A2 acts_upstream_of_or_within ISO
IEA		 MGI:2180721 (PMID:15069081), (PMID:20034106)
GO_REF:0000107		 RGD
Ensembl		 PMID:15069081 PMID:20034106 GO_REF:0000107 NCBI chr 8:71,877,850...71,957,107
Ensembl chr 8:71,877,850...71,957,107 		JBrowse link
G Alx3 ALX homeobox 3 acts_upstream_of_or_within ISO
IEA		 MGI:108359 (PMID:11641221)
GO_REF:0000107		 RGD
Ensembl		 PMID:11641221 GO_REF:0000107 NCBI chr 2:195,231,197...195,241,609
Ensembl chr 2:195,231,197...195,241,609 		JBrowse link
G Alx4 ALX homeobox 4 acts_upstream_of_or_within ISO
IEA		 MGI:1277097 (PMID:11641221)
GO_REF:0000107		 RGD
Ensembl		 PMID:11641221 GO_REF:0000107 NCBI chr 3:79,611,682...79,648,260
Ensembl chr 3:79,611,719...79,648,260 		JBrowse link
G Cacna1c calcium voltage-gated channel subunit alpha1 C involved_in ISO (PMID:15454078) RGD PMID:15454078 NCBI chr 4:153,431,169...154,051,932
Ensembl chr 4:151,764,138...152,379,648 		JBrowse link
G Crabp2 cellular retinoic acid binding protein 2 acts_upstream_of_or_within ISO MGI:1857508 (PMID:7720575) RGD PMID:7720575 NCBI chr 2:173,417,004...173,421,352
Ensembl chr 2:173,416,857...173,421,379 		JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within ISO
IEA		 (PMID:15371327)
GO_REF:0000107		 RGD
Ensembl		 PMID:15371327 GO_REF:0000107 NCBI chr 8:129,517,576...129,544,661
Ensembl chr 8:120,639,995...120,667,111 		JBrowse link
G En1 engrailed homeobox 1 acts_upstream_of_or_within ISO
IEA		 MGI:98961 (PMID:9362463)
GO_REF:0000107		 RGD
Ensembl		 PMID:9362463 GO_REF:0000107 NCBI chr13:31,750,892...31,756,477
Ensembl chr13:31,751,545...31,755,943 		JBrowse link
G Hoxa11 homeobox A11 acts_upstream_of_or_within ISO
IEA		 MGI:96203 (PMID:22916278)
GO_REF:0000107		 RGD
Ensembl		 PMID:22916278 GO_REF:0000107 NCBI chr 4:82,673,139...82,676,801
Ensembl chr 4:81,342,528...81,346,232 		JBrowse link
G Hoxa13 homeo box A13 acts_upstream_of_or_within ISO
IEA		 MGI:2150506 (PMID:15733672)
GO_REF:0000107		 RGD
Ensembl		 PMID:15733672 GO_REF:0000107 NCBI chr 4:81,358,956...81,361,091
Ensembl chr 4:81,358,956...81,361,091 		JBrowse link
G Hoxa9 homeobox A9 acts_upstream_of_or_within ISO MGI:96210 (PMID:8625797) RGD PMID:8625797 NCBI chr 4:81,323,235...81,329,344
Ensembl chr 4:81,323,382...81,326,358 		JBrowse link
G Hoxd11 homeobox D11 acts_upstream_of_or_within ISO MGI:96172 (PMID:22916278) RGD PMID:22916278 NCBI chr 3:59,584,840...59,587,257
Ensembl chr 3:59,585,039...59,586,783 		JBrowse link
G Hoxd9 homeo box D9 acts_upstream_of_or_within ISO
IEA		 MGI:2150414|MGI:96180 (PMID:8625797)
GO_REF:0000107		 RGD
Ensembl		 PMID:8625797 GO_REF:0000107 NCBI chr 3:59,600,575...59,602,755
Ensembl chr 3:59,600,575...59,602,754 		JBrowse link
G Ift122 intraflagellar transport 122 involved_in ISO (PMID:21209331) RGD PMID:21209331 NCBI chr 4:150,577,525...150,648,052
Ensembl chr 4:148,905,046...148,975,458 		JBrowse link
G Lnpk lunapark, ER junction formation factor acts_upstream_of_or_within ISO
IEA		 MGI:1857660 (PMID:22916278), (PMID:9342042)
GO_REF:0000107		 RGD
Ensembl		 PMID:9342042 PMID:22916278 GO_REF:0000107 NCBI chr 3:59,418,872...59,487,029
Ensembl chr 3:59,424,286...59,486,518 		JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:1922667|MGI:2156191|MGI:4415718|MGI:98961 (PMID:11029008), (PMID:15880584), (PMID:18256198), (PMID:19653321) RGD PMID:11029008 PMID:15880584 PMID:18256198 PMID:19653321 NCBI chr 4:168,997,937...169,131,716
Ensembl chr 4:167,270,353...167,400,497 		JBrowse link
G Mecom MDS1 and EVI1 complex locus acts_upstream_of_or_within ISO MGI:2158381 (PMID:17029558) RGD PMID:17029558 NCBI chr 2:114,837,815...115,393,052
Ensembl chr 2:112,909,321...113,464,590 		JBrowse link
G Msx1 msh homeobox 1 acts_upstream_of_or_within ISO MGI:97169 (PMID:21465616) RGD PMID:21465616 NCBI chr14:72,961,036...72,964,970
Ensembl chr14:72,961,148...72,964,966 		JBrowse link
G Msx2 msh homeobox 2 acts_upstream_of_or_within ISO
IEA		 MGI:97168 (PMID:21465616)
GO_REF:0000107		 RGD
Ensembl		 PMID:21465616 GO_REF:0000107 NCBI chr17:11,102,284...11,107,949
Ensembl chr17:11,097,103...11,102,879 		JBrowse link
G Nipbl NIPBL, cohesin loading factor involved_in ISO
IEA		 (PMID:19242925), (PMID:8291537)
GO_REF:0000107		 RGD
Ensembl		 PMID:8291537 PMID:19242925 GO_REF:0000107 NCBI chr 2:57,399,443...57,586,770
Ensembl chr 2:57,399,445...57,565,899 		JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in ISO
IEA		 UniProtKB:Q91ZD1 (PMID:21262216)
GO_REF:0000107		 RGD
Ensembl		 PMID:21262216 GO_REF:0000107 NCBI chr 6:32,369,561...32,380,822
Ensembl chr 6:32,373,816...32,380,817 		JBrowse link
G Osr2 odd-skipped related transcription factor 2 involved_in ISO
IEA		 UniProtKB:Q9WVG7 (PMID:11520675), (PMID:21262216)
GO_REF:0000107		 RGD
Ensembl		 PMID:11520675 PMID:21262216 GO_REF:0000107 NCBI chr 7:66,487,841...66,495,003
Ensembl chr 7:66,487,839...66,495,224 		JBrowse link
G Rdh10 retinol dehydrogenase 10 acts_upstream_of_or_within ISO
IEA		 (PMID:17473173)
GO_REF:0000107		 RGD
Ensembl		 PMID:17473173 GO_REF:0000107 NCBI chr 5:3,186,671...3,215,572
Ensembl chr 5:3,188,445...3,215,572 		JBrowse link
G Reck reversion-inducing-cysteine-rich protein with kazal motifs acts_upstream_of_or_within ISO
IEA		 MGI:4830337 (PMID:23213437)
GO_REF:0000107		 RGD
Ensembl		 PMID:23213437 GO_REF:0000107 NCBI chr 5:58,102,961...58,169,516
Ensembl chr 5:58,102,981...58,169,502 		JBrowse link
G Rpgrip1l Rpgrip1-like acts_upstream_of_or_within ISO MGI:3716208 (PMID:17553904) RGD PMID:17553904 NCBI chr19:31,865,050...31,957,930
Ensembl chr19:15,692,150...15,785,083 		JBrowse link
G Rspo2 R-spondin 2 acts_upstream_of_or_within ISO
IEA		 MGI:1298218|MGI:3045965 (PMID:18256198)
GO_REF:0000107		 RGD
Ensembl		 PMID:18256198 GO_REF:0000107 NCBI chr 7:74,096,378...74,239,398
Ensembl chr 7:74,103,090...74,238,933 		JBrowse link
G Runx2 RUNX family transcription factor 2 acts_upstream_of_or_within ISO MGI:2176466 (PMID:22916278) RGD PMID:22916278 NCBI chr 9:23,661,278...23,990,248
Ensembl chr 9:16,167,482...16,492,167 		JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO
IEA		 MGI:1857796 (PMID:11118883), (PMID:11476582)
GO_REF:0000107		 RGD
Ensembl		 PMID:11118883 PMID:11476582 GO_REF:0000107 NCBI chr 4:7,687,872...7,697,025
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Shox2 SHOX homeobox 2 acts_upstream_of_or_within ISO
IEA		 (PMID:22916278)
GO_REF:0000107		 RGD
Ensembl		 PMID:22916278 GO_REF:0000107 NCBI chr 2:151,217,049...151,227,180
Ensembl chr 2:151,217,552...151,227,143 		JBrowse link
G Tbx3 T-box transcription factor 3 involved_in ISO
IEA
ISS		 (PMID:12116211)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:12116211 GO_REF:0000024 GO_REF:0000107 NCBI chr12:36,879,924...36,894,849
Ensembl chr12:36,881,445...36,893,708 		JBrowse link
G Tbx5 T-box transcription factor 5 involved_in
acts_upstream_of_or_within		 ISO
IEA
ISS		 (PMID:16183809)
GO_REF:0000107
MGI:2387851 (PMID:11572777), (PMID:12490567)
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:11572777 PMID:12490567 PMID:16183809 GO_REF:0000024 GO_REF:0000107 NCBI chr12:42,342,926...42,399,723
Ensembl chr12:36,688,014...36,734,885 		JBrowse link
G Tfap2a transcription factor AP-2 alpha involved_in ISS
ISO		 GO_REF:0000024
(PMID:9811866)		 UniProt
RGD		 PMID:9811866 GO_REF:0000024 NCBI chr17:24,028,716...24,047,507
Ensembl chr17:24,024,432...24,047,507 		JBrowse link
G Tp63 tumor protein p63 acts_upstream_of_or_within ISO
IEA		 MGI:5882553|MGI:5882555 (PMID:25503409)
GO_REF:0000107		 RGD
Ensembl		 PMID:25503409 GO_REF:0000107 NCBI chr11:74,838,858...75,049,764
Ensembl chr11:74,838,859...75,049,398 		JBrowse link
G Twist1 twist family bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:1857265 (PMID:12175489) RGD PMID:12175489 NCBI chr 6:50,674,910...50,676,904
Ensembl chr 6:50,674,678...50,677,653 		JBrowse link
G Wnt3 Wnt family member 3 acts_upstream_of_or_within ISO MGI:2450902|MGI:2450903 (PMID:12569130) RGD PMID:12569130 NCBI chr10:89,180,224...89,224,195
Ensembl chr10:88,680,248...88,724,099 		JBrowse link
G Wnt7a Wnt family member 7A involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:16826533)
GO_REF:0000107
MGI:1298218|MGI:1857009|MGI:95389 (PMID:15880584), (PMID:9362463)		 RGD
Ensembl		 PMID:9362463 PMID:15880584 PMID:16826533 GO_REF:0000107 MGI:48652 NCBI chr 4:123,863,108...123,908,981
Ensembl chr 4:123,863,108...123,908,981 		JBrowse link
G Wnt9a Wnt family member 9A acts_upstream_of_or_within ISO (PMID:15371327) RGD PMID:15371327 NCBI chr10:44,094,140...44,121,134
Ensembl chr10:44,094,140...44,121,133 		JBrowse link
post-embryonic forelimb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atrx ATRX, chromatin remodeler acts_upstream_of_or_within ISO
IEA		 (PMID:24386478)
GO_REF:0000107		 RGD
Ensembl		 PMID:24386478 GO_REF:0000107 NCBI chr  X:74,916,548...75,062,880
Ensembl chr  X:70,850,981...70,997,330 		JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO MGI:6402836 (PMID:24770645) RGD PMID:24770645 NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715 		JBrowse link
G Vps54 VPS54 subunit of GARP complex involved_in IEA
ISO		 GO_REF:0000107
MGI:1857091 (PMID:11403940)		 Ensembl
RGD		 PMID:11403940 GO_REF:0000107 NCBI chr14:95,378,821...95,455,871
Ensembl chr14:95,378,012...95,455,857 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20558
    developmental process 7149
      anatomical structure morphogenesis 3017
        appendage morphogenesis 183
          limb morphogenesis 183
            forelimb morphogenesis 47
              embryonic forelimb morphogenesis 36
              post-embryonic forelimb morphogenesis 3
Path 2
Term Annotations click to browse term
  biological_process 20558
    developmental process 7149
      anatomical structure development 6646
        multicellular organism development 5353
          appendage development 222
            appendage morphogenesis 183
              limb morphogenesis 183
                forelimb morphogenesis 47
                  embryonic forelimb morphogenesis 36
                  post-embryonic forelimb morphogenesis 3
paths to the root