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ONTOLOGY REPORT - ANNOTATIONS

Term:embryonic forelimb morphogenesis
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Accession:GO:0035115 term browser browse the term
Definition:The process, occurring in the embryo, by which the anatomical structures of the forelimb are generated and organized. The forelimbs are the front limbs of an animal, e.g. the arms of a human.
Synonyms:narrow_synonym: embryonic arm morphogenesis
 alt_id: GO:0035117

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embryonic forelimb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a2 aldehyde dehydrogenase 1 family member A2 acts_upstream_of_or_within ISO (MGI:3046038|PMID:15069081), (MGI:4422129|PMID:20034106) MGI PMID:15069081 PMID:20034106 MGI:3046038 MGI:4422129 NCBI chrNW_004955450:16,406,578...16,453,048
Ensembl chrNW_004955450:16,406,436...16,453,180 		JBrowse link
G Alx3 ALX homeobox 3 acts_upstream_of_or_within ISO (MGI:2151109|PMID:11641221) MGI PMID:11641221 MGI:2151109 NCBI chrNW_004955435:13,584,129...13,594,316
Ensembl chrNW_004955435:13,583,611...13,594,316 		JBrowse link
G Alx4 ALX homeobox 4 acts_upstream_of_or_within ISO (MGI:2151109|PMID:11641221) MGI PMID:11641221 MGI:2151109 NCBI chrNW_004955422:3,278,615...3,290,799
Ensembl chrNW_004955422:3,278,615...3,291,714 		JBrowse link
G Cacna1c calcium voltage-gated channel subunit alpha1 C involved_in ISO (PMID:15454078) BHF-UCL PMID:15454078 NCBI chrNW_004955454:4,573,647...5,199,046
Ensembl chrNW_004955454:4,490,923...5,198,506 		JBrowse link
G Crabp2 cellular retinoic acid binding protein 2 acts_upstream_of_or_within ISO (MGI:71462|PMID:7720575) MGI PMID:7720575 MGI:71462 NCBI chrNW_004955545:2,777,523...2,782,567
Ensembl chrNW_004955545:2,777,474...2,782,567 		JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within ISO (MGI:3055626|PMID:15371327) MGI PMID:15371327 MGI:3055626 NCBI chrNW_004955420:29,030,716...29,047,447
Ensembl chrNW_004955420:29,030,716...29,047,449 		JBrowse link
G En1 engrailed homeobox 1 acts_upstream_of_or_within ISO (MGI:1194987|PMID:9362463) MGI PMID:9362463 MGI:1194987 NCBI chrNW_004955459:10,839,581...10,844,198 JBrowse link
G Hoxa11 homeobox A11 acts_upstream_of_or_within ISO (MGI:5462316|PMID:22916278) MGI PMID:22916278 MGI:5462316 NCBI chrNW_004955410:28,875,780...28,879,643
Ensembl chrNW_004955410:28,877,055...28,879,465 		JBrowse link
G Hoxa13 homeobox A13 acts_upstream_of_or_within ISO (MGI:3530958|PMID:15733672) MGI PMID:15733672 MGI:3530958 NCBI chrNW_004955410:28,887,952...28,893,515
Ensembl chrNW_004955410:28,890,171...28,893,515 		JBrowse link
G Hoxa9 homeobox A9 acts_upstream_of_or_within ISO (MGI:78984|PMID:8625797) MGI PMID:8625797 MGI:78984 NCBI chrNW_004955410:28,856,661...28,861,803
Ensembl chrNW_004955410:28,856,661...28,861,803 		JBrowse link
G Hoxd11 homeobox D11 acts_upstream_of_or_within ISO (MGI:5462316|PMID:22916278) MGI PMID:22916278 MGI:5462316 NCBI chrNW_004955403:20,541,870...20,556,574 JBrowse link
G Hoxd9 homeobox D9 acts_upstream_of_or_within ISO (MGI:78984|PMID:8625797) MGI PMID:8625797 MGI:78984 NCBI chrNW_004955451:12,619,722...12,621,320 JBrowse link
G Ift122 intraflagellar transport 122 involved_in ISO (MGI:4888042|PMID:21209331) BHF-UCL PMID:21209331 MGI:4888042 NCBI chrNW_004955429:17,795,757...17,858,609
Ensembl chrNW_004955429:17,794,879...17,858,609 		JBrowse link
G Lnpk lunapark, ER junction formation factor acts_upstream_of_or_within ISO (MGI:1097490|PMID:9342042)
(MGI:5462316|PMID:22916278)		 MGI PMID:9342042 PMID:22916278 MGI:1097490 MGI:5462316 NCBI chrNW_004955403:20,654,961...20,728,173
Ensembl chrNW_004955403:20,654,961...20,729,954 		JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (MGI:4413396|PMID:19653321)
(MGI:3774879|PMID:18256198)
(MGI:1891551|PMID:11029008)
(MGI:3578068|PMID:15880584)		 MGI PMID:11029008 PMID:15880584 PMID:18256198 PMID:19653321 MGI:1891551 MGI:3578068 MGI:3774879 MGI:4413396 NCBI chrNW_004955413:9,080,901...9,237,644
Ensembl chrNW_004955413:9,080,914...9,237,650 		JBrowse link
G Mecom MDS1 and EVI1 complex locus acts_upstream_of_or_within ISO (MGI:3686680|PMID:17029558) MGI PMID:17029558 MGI:3686680 NCBI chrNW_004955448:18,259,847...18,542,085
Ensembl chrNW_004955448:18,259,083...18,439,646 		JBrowse link
G Msx1 msh homeobox 1 acts_upstream_of_or_within ISO (MGI:4948979|PMID:21465616) MGI PMID:21465616 MGI:4948979 NCBI chrNW_004955514:4,923,552...4,927,471
Ensembl chrNW_004955514:4,923,552...4,927,471 		JBrowse link
G Msx2 msh homeobox 2 acts_upstream_of_or_within ISO (MGI:4948979|PMID:21465616) MGI PMID:21465616 MGI:4948979 NCBI chrNW_004955408:27,323,405...27,329,484
Ensembl chrNW_004955408:27,323,360...27,329,755 		JBrowse link
G Nipbl NIPBL cohesin loading factor involved_in ISO (PMID:19242925), (PMID:8291537) BHF-UCL PMID:8291537 PMID:19242925 NCBI chrNW_004955426:21,666,958...21,841,515
Ensembl chrNW_004955426:21,666,857...21,841,515 		JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in ISO (MGI:4950000|PMID:21262216) BHF-UCL PMID:21262216 MGI:4950000 NCBI chrNW_004955469:1,954,470...1,961,344
Ensembl chrNW_004955469:1,953,370...1,961,390 		JBrowse link
G Osr2 odd-skipped related transciption factor 2 involved_in ISO (MGI:4950000|PMID:21262216)
(MGI:2149941|PMID:11520675)		 BHF-UCL
UniProt		 PMID:11520675 PMID:21262216 MGI:2149941 MGI:4950000 NCBI chrNW_004955417:14,502,450...14,510,015
Ensembl chrNW_004955417:14,502,451...14,510,160 		JBrowse link
G Rdh10 retinol dehydrogenase 10 acts_upstream_of_or_within ISO (MGI:3709664|PMID:17473173) MGI PMID:17473173 MGI:3709664 NCBI chrNW_004955444:6,878,722...6,909,421
Ensembl chrNW_004955444:6,878,722...6,909,421 		JBrowse link
G Reck reversion inducing cysteine rich protein with kazal motifs acts_upstream_of_or_within ISO (MGI:5424521|PMID:23213437) MGI PMID:23213437 MGI:5424521 NCBI chrNW_004955472:222,261...276,869
Ensembl chrNW_004955472:223,683...287,089 		JBrowse link
G Rpgrip1l RPGRIP1 like acts_upstream_of_or_within ISO (MGI:3715393|PMID:17553904) MGI PMID:17553904 MGI:3715393 NCBI chrNW_004955433:11,321,504...11,423,981
Ensembl chrNW_004955433:11,322,590...11,424,569 		JBrowse link
G Rspo2 R-spondin 2 acts_upstream_of_or_within ISO (MGI:3774879|PMID:18256198) MGI PMID:18256198 MGI:3774879 NCBI chrNW_004955417:30,643,554...30,704,497
Ensembl chrNW_004955417:30,643,554...30,704,497 		JBrowse link
G Runx2 RUNX family transcription factor 2 acts_upstream_of_or_within ISO (MGI:5462316|PMID:22916278) MGI PMID:22916278 MGI:5462316 NCBI chrNW_004955437:10,598,145...10,885,858
Ensembl chrNW_004955437:10,598,145...10,800,560 		JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO (MGI:1928592|PMID:11118883), (MGI:2149276|PMID:11476582) MGI PMID:11118883 PMID:11476582 MGI:1928592 MGI:2149276 NCBI chrNW_004955491:8,647,133...8,657,381 JBrowse link
G Shox2 short stature homeobox 2 acts_upstream_of_or_within ISO (MGI:5462316|PMID:22916278) MGI PMID:22916278 MGI:5462316 NCBI chrNW_004955448:8,937,656...8,947,890
Ensembl chrNW_004955448:8,937,610...8,947,890 		JBrowse link
G Tbx3 T-box transcription factor 3 involved_in ISO (PMID:12116211) UniProt PMID:12116211 NCBI chrNW_004955455:15,988,153...16,000,156
Ensembl chrNW_004955455:15,988,663...16,000,063 		JBrowse link
G Tbx5 T-box transcription factor 5 involved_in
acts_upstream_of_or_within		 ISO (PMID:16183809)
(MGI:2150876|PMID:11572777), (MGI:2448173|PMID:12490567)		 UniProt
MGI		 PMID:11572777 PMID:12490567 PMID:16183809 MGI:2150876 MGI:2448173 NCBI chrNW_004955455:16,133,130...16,217,894
Ensembl chrNW_004955455:16,132,975...16,217,953 		JBrowse link
G Tfap2a transcription factor AP-2 alpha involved_in ISO (MGI:1313057|PMID:9811866) UniProt PMID:9811866 MGI:1313057 NCBI chrNW_004955465:3,877,896...3,900,259
Ensembl chrNW_004955465:3,882,549...3,898,929 		JBrowse link
G Tp63 tumor protein p63 acts_upstream_of_or_within ISO (MGI:5824492|PMID:25503409) MGI PMID:25503409 MGI:5824492 NCBI chrNW_004955420:18,178,639...18,384,786
Ensembl chrNW_004955420:18,176,155...18,384,786 		JBrowse link
G Twist1 twist family bHLH transcription factor 1 acts_upstream_of_or_within ISO (MGI:2180404|PMID:12175489) MGI PMID:12175489 MGI:2180404 NCBI chrNW_004955410:22,003,981...22,005,483 JBrowse link
G Wnt7a Wnt family member 7A involved_in
acts_upstream_of_or_within		 ISO (PMID:16826533)
(MGI:3578068|PMID:15880584)
(MGI:1194987|PMID:9362463)		 BHF-UCL
MGI		 PMID:9362463 PMID:15880584 PMID:16826533 MGI:1194987 MGI:3578068 MGI:48652 NCBI chrNW_004955429:12,647,993...12,693,998
Ensembl chrNW_004955429:12,647,993...12,694,895 		JBrowse link
G Wnt9a Wnt family member 9A acts_upstream_of_or_within ISO (MGI:3055626|PMID:15371327) MGI PMID:15371327 MGI:3055626 NCBI chrNW_004955581:422,028...438,321
Ensembl chrNW_004955581:421,451...438,380 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12334
    developmental process 5766
      anatomical structure morphogenesis 2547
        embryonic morphogenesis 636
          embryonic appendage morphogenesis 141
            embryonic limb morphogenesis 141
              embryonic forelimb morphogenesis 35
Path 2
Term Annotations click to browse term
  biological_process 12334
    developmental process 5766
      anatomical structure development 5455
        multicellular organism development 4483
          appendage development 205
            appendage morphogenesis 173
              limb morphogenesis 173
                embryonic limb morphogenesis 141
                  embryonic forelimb morphogenesis 35
paths to the root