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ONTOLOGY REPORT - ANNOTATIONS


Term:embryonic forelimb morphogenesis
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Accession:GO:0035115 term browser browse the term
Definition:The process, occurring in the embryo, by which the anatomical structures of the forelimb are generated and organized. The forelimbs are the front limbs of an animal, e.g. the arms of a human.
Synonyms:narrow_synonym: embryonic arm morphogenesis
 alt_id: GO:0035117



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embryonic forelimb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a2 aldehyde dehydrogenase 1 family, member A2 acts_upstream_of_or_within ISO MGI:2180721 (MGI:3046038|PMID:15069081), (MGI:4422129|PMID:20034106) RGD PMID:15069081 PMID:20034106 MGI:3046038 MGI:4422129 NCBI chr 8:71,877,850...71,957,107
Ensembl chr 8:71,877,850...71,957,107
JBrowse link
G Alx3 ALX homeobox 3 acts_upstream_of_or_within ISO MGI:108359 (MGI:2151109|PMID:11641221) RGD PMID:11641221 MGI:2151109 NCBI chr 2:195,231,197...195,241,609
Ensembl chr 2:195,231,197...195,241,609
JBrowse link
G Alx4 ALX homeobox 4 acts_upstream_of_or_within ISO MGI:1277097 (MGI:2151109|PMID:11641221) RGD PMID:11641221 MGI:2151109 NCBI chr 3:79,611,682...79,648,260
Ensembl chr 3:79,611,719...79,648,260
JBrowse link
G Cacna1c calcium voltage-gated channel subunit alpha1 C involved_in ISO (PMID:15454078) RGD PMID:15454078 NCBI chr 4:151,764,138...152,379,454
Ensembl chr 4:151,764,138...152,379,648
JBrowse link
G Crabp2 cellular retinoic acid binding protein 2 acts_upstream_of_or_within ISO MGI:1857508 (MGI:71462|PMID:7720575) RGD PMID:7720575 MGI:71462 NCBI chr 2:173,417,004...173,421,352
Ensembl chr 2:173,416,857...173,421,379
JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3055626|PMID:15371327)
GO_REF:0000107
RGD
Ensembl
PMID:15371327 GO_REF:0000107 MGI:3055626 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
JBrowse link
G En1 engrailed homeobox 1 acts_upstream_of_or_within ISO MGI:98961 (MGI:1194987|PMID:9362463) RGD PMID:9362463 MGI:1194987 NCBI chr13:31,750,892...31,756,477
Ensembl chr13:31,751,545...31,755,943
JBrowse link
G Hoxa11 homeobox A11 acts_upstream_of_or_within ISO MGI:96203 (MGI:5462316|PMID:22916278) RGD PMID:22916278 MGI:5462316 NCBI chr 4:81,342,527...81,346,189
Ensembl chr 4:81,342,528...81,346,232
JBrowse link
G Hoxa13 homeo box A13 acts_upstream_of_or_within ISO MGI:2150506 (MGI:3530958|PMID:15733672) RGD PMID:15733672 MGI:3530958 NCBI chr 4:81,358,956...81,361,091
Ensembl chr 4:81,358,956...81,361,091
JBrowse link
G Hoxa9 homeobox A9 acts_upstream_of_or_within ISO MGI:96210 (MGI:78984|PMID:8625797) RGD PMID:8625797 MGI:78984 NCBI chr 4:81,323,235...81,329,344
Ensembl chr 4:81,323,382...81,326,358
JBrowse link
G Hoxd11 homeobox D11 acts_upstream_of_or_within ISO MGI:96172 (MGI:5462316|PMID:22916278) RGD PMID:22916278 MGI:5462316 NCBI chr 3:59,584,840...59,587,257
Ensembl chr 3:59,585,039...59,586,783
JBrowse link
G Hoxd9 homeo box D9 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2150414|MGI:96180 (MGI:78984|PMID:8625797)
Ensembl
RGD
PMID:8625797 GO_REF:0000107 MGI:78984 NCBI chr 3:59,600,575...59,602,755
Ensembl chr 3:59,600,575...59,602,754
JBrowse link
G Ift122 intraflagellar transport 122 involved_in ISO (MGI:4888042|PMID:21209331) RGD PMID:21209331 MGI:4888042 NCBI chr 4:148,905,031...148,975,458
Ensembl chr 4:148,905,046...148,975,458
JBrowse link
G Lnpk lunapark, ER junction formation factor acts_upstream_of_or_within ISO MGI:1857660 (MGI:1097490|PMID:9342042), (MGI:5462316|PMID:22916278) RGD PMID:9342042 PMID:22916278 MGI:1097490 MGI:5462316 NCBI chr 3:59,418,872...59,487,029
Ensembl chr 3:59,424,286...59,486,518
JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:1922667|MGI:2156191|MGI:4415718|MGI:98961 (MGI:1891551|PMID:11029008), (MGI:3578068|PMID:15880584), (MGI:3774879|PMID:18256198), (MGI:4413396|PMID:19653321) RGD PMID:11029008 PMID:15880584 PMID:18256198 PMID:19653321 MGI:1891551 MGI:3578068 MGI:3774879 MGI:4413396 NCBI chr 4:167,266,581...167,400,155
Ensembl chr 4:167,270,353...167,400,497
JBrowse link
G Mecom MDS1 and EVI1 complex locus acts_upstream_of_or_within ISO MGI:2158381 (MGI:3686680|PMID:17029558) RGD PMID:17029558 MGI:3686680 NCBI chr 2:112,909,353...113,464,583
Ensembl chr 2:112,909,321...113,464,590
JBrowse link
G Msx1 msh homeobox 1 acts_upstream_of_or_within ISO MGI:97169 (MGI:4948979|PMID:21465616) RGD PMID:21465616 MGI:4948979 NCBI chr14:72,961,170...72,964,970
Ensembl chr14:72,961,148...72,964,966
JBrowse link
G Msx2 msh homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:97168 (MGI:4948979|PMID:21465616)
Ensembl
RGD
PMID:21465616 GO_REF:0000107 MGI:4948979 NCBI chr17:11,097,214...11,102,879
Ensembl chr17:11,097,103...11,102,879
JBrowse link
G Nipbl NIPBL, cohesin loading factor involved_in ISO (PMID:19242925), (PMID:8291537) RGD PMID:8291537 PMID:19242925 NCBI chr 2:57,399,443...57,586,770
Ensembl chr 2:57,399,445...57,565,899
JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in ISO UniProtKB:Q91ZD1 (MGI:4950000|PMID:21262216) RGD PMID:21262216 MGI:4950000 NCBI chr 6:32,369,561...32,380,822
Ensembl chr 6:32,373,816...32,380,817
JBrowse link
G Osr2 odd-skipped related transciption factor 2 involved_in
acts_upstream_of_or_within
ISO UniProtKB:Q9WVG7 (MGI:4950000|PMID:21262216)
(PMID:11520675)
UniProtKB:Q9WVG7 (MGI:2149941|PMID:11520675), (MGI:4950000|PMID:21262216)
RGD PMID:11520675 PMID:21262216 MGI:2149941 MGI:4950000 NCBI chr 7:66,487,841...66,495,003
Ensembl chr 7:66,487,839...66,495,224
JBrowse link
G Rdh10 retinol dehydrogenase 10 acts_upstream_of_or_within ISO (MGI:3709664|PMID:17473173) RGD PMID:17473173 MGI:3709664 NCBI chr 5:3,186,671...3,215,572
Ensembl chr 5:3,188,445...3,215,572
JBrowse link
G Reck reversion-inducing-cysteine-rich protein with kazal motifs acts_upstream_of_or_within ISO MGI:4830337 (MGI:5424521|PMID:23213437) RGD PMID:23213437 MGI:5424521 NCBI chr 5:58,102,915...58,169,513
Ensembl chr 5:58,102,981...58,169,502
JBrowse link
G Rpgrip1l Rpgrip1-like acts_upstream_of_or_within ISO MGI:3716208 (MGI:3715393|PMID:17553904) RGD PMID:17553904 MGI:3715393 NCBI chr19:15,692,189...15,785,083
Ensembl chr19:15,692,150...15,785,083
JBrowse link
G Rspo2 R-spondin 2 acts_upstream_of_or_within ISO MGI:1298218|MGI:3045965 (MGI:3774879|PMID:18256198) RGD PMID:18256198 MGI:3774879 NCBI chr 7:74,096,378...74,239,398
Ensembl chr 7:74,103,090...74,238,933
JBrowse link
G Runx2 RUNX family transcription factor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2176466 (MGI:5462316|PMID:22916278)
Ensembl
RGD
PMID:22916278 GO_REF:0000107 MGI:5462316 NCBI chr 9:16,167,504...16,492,826
Ensembl chr 9:16,167,482...16,492,167
JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857796 (MGI:1928592|PMID:11118883), (MGI:2149276|PMID:11476582)
Ensembl
RGD
PMID:11118883 PMID:11476582 GO_REF:0000107 MGI:1928592 MGI:2149276 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
JBrowse link
G Shox2 short stature homeobox 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5462316|PMID:22916278)
GO_REF:0000107
RGD
Ensembl
PMID:22916278 GO_REF:0000107 MGI:5462316 NCBI chr 2:151,217,049...151,227,180
Ensembl chr 2:151,217,552...151,227,143
JBrowse link
G Tbx3 T-box transcription factor 3 involved_in ISO
ISS
(PMID:12116211)
GO_REF:0000024
RGD
UniProt
PMID:12116211 GO_REF:0000024 NCBI chr12:36,879,924...36,894,849
Ensembl chr12:36,881,445...36,893,708
JBrowse link
G Tbx5 T-box transcription factor 5 involved_in
acts_upstream_of_or_within
ISO
IEA
ISS
(PMID:16183809)
GO_REF:0000107
GO_REF:0000024
MGI:2387851 (MGI:2150876|PMID:11572777), (MGI:2448173|PMID:12490567)
RGD
Ensembl
UniProt
PMID:11572777 PMID:12490567 PMID:16183809 GO_REF:0000024 GO_REF:0000107 MGI:2150876 MGI:2448173 NCBI chr12:36,686,344...36,739,253
Ensembl chr12:36,688,014...36,734,885
JBrowse link
G Tfap2a transcription factor AP-2 alpha involved_in ISS
ISO
GO_REF:0000024
(MGI:1313057|PMID:9811866)
UniProt
RGD
PMID:9811866 GO_REF:0000024 MGI:1313057 NCBI chr17:24,028,716...24,047,507
Ensembl chr17:24,024,432...24,047,507
JBrowse link
G Tp63 tumor protein p63 acts_upstream_of_or_within ISO MGI:5882553|MGI:5882555 (MGI:5824492|PMID:25503409) RGD PMID:25503409 MGI:5824492 NCBI chr11:74,838,858...75,049,764
Ensembl chr11:74,838,859...75,049,398
JBrowse link
G Twist1 twist family bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:1857265 (MGI:2180404|PMID:12175489) RGD PMID:12175489 MGI:2180404 NCBI chr 6:50,674,910...50,676,904
Ensembl chr 6:50,674,678...50,677,653
JBrowse link
G Wnt3 Wnt family member 3 acts_upstream_of_or_within ISO MGI:2450902|MGI:2450903 (MGI:2450015|PMID:12569130) RGD PMID:12569130 MGI:2450015 NCBI chr10:88,680,248...88,724,170
Ensembl chr10:88,680,248...88,724,099
JBrowse link
G Wnt7a Wnt family member 7A involved_in
acts_upstream_of_or_within
ISO (PMID:16826533)
MGI:1298218|MGI:1857009|MGI:95389 (MGI:1194987|PMID:9362463), (MGI:3578068|PMID:15880584)
RGD PMID:9362463 PMID:15880584 PMID:16826533 MGI:1194987 MGI:3578068 MGI:48652 NCBI chr 4:123,863,108...123,908,981
Ensembl chr 4:123,863,108...123,908,981
JBrowse link
G Wnt9a Wnt family member 9A acts_upstream_of_or_within ISO (MGI:3055626|PMID:15371327) RGD PMID:15371327 MGI:3055626 NCBI chr10:44,094,140...44,121,134
Ensembl chr10:44,094,140...44,121,133
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19898
    developmental process 7021
      anatomical structure morphogenesis 2971
        embryonic morphogenesis 702
          embryonic appendage morphogenesis 147
            embryonic limb morphogenesis 147
              embryonic forelimb morphogenesis 36
Path 2
Term Annotations click to browse term
  biological_process 19898
    developmental process 7021
      anatomical structure development 6456
        multicellular organism development 5242
          appendage development 217
            appendage morphogenesis 182
              limb morphogenesis 182
                embryonic limb morphogenesis 147
                  embryonic forelimb morphogenesis 36
paths to the root