Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:limb morphogenesis
go back to main search page
Accession:GO:0035108 term browser browse the term
Definition:The process in which the anatomical structures of a limb are generated and organized. A limb is a paired appendage of a tetrapod used for locomotion or grasping.
Synonyms:narrow_synonym: limb bud morphogenesis


show annotations for term's descendants           Sort by:
limb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alx4 ALX homeobox 4 acts_upstream_of_or_within ISO
IEA		 MGI:104621|MGI:1857484 (PMID:9374397), (PMID:9847249)
GO_REF:0000107		 RGD
Ensembl		 PMID:9374397 PMID:9847249 GO_REF:0000107 NCBI chr 3:100,067,052...100,103,624
Ensembl chr 3:79,611,719...79,648,260 		JBrowse link
G Asph aspartate-beta-hydroxylase acts_upstream_of_or_within ISO MGI:2179287 (PMID:11773073) RGD PMID:11773073 NCBI chr 5:27,398,933...27,611,519
Ensembl chr 5:22,603,486...22,813,876 		JBrowse link
G Bak1 BCL2-antagonist/killer 1 acts_upstream_of_or_within ISO
IEA		 MGI:99702 (PMID:11163212)
GO_REF:0000107		 RGD
Ensembl		 PMID:11163212 GO_REF:0000107 NCBI chr20:5,102,334...5,111,615
Ensembl chr20:5,100,480...5,109,264 		JBrowse link
G Bax BCL2 associated X, apoptosis regulator acts_upstream_of_or_within ISO
IEA		 MGI:1097161 (PMID:11163212)
GO_REF:0000107		 RGD
Ensembl		 PMID:11163212 GO_REF:0000107 NCBI chr 1:105,076,472...105,081,906
Ensembl chr 1:95,938,808...95,945,368 		JBrowse link
G Cibar1 CBY1 interacting BAR domain containing 1 involved_in ISO
IEA		 (PMID:30395363)
GO_REF:0000107		 RGD
Ensembl		 PMID:30395363 GO_REF:0000107 NCBI chr 5:25,613,993...25,632,440
Ensembl chr 5:25,614,033...25,632,489 		JBrowse link
G Col2a1 collagen type II alpha 1 chain acts_upstream_of_or_within ISO
IEA		 (PMID:10100048)
GO_REF:0000107		 RGD
Ensembl		 PMID:10100048 GO_REF:0000107 NCBI chr 7:130,977,561...131,006,627
Ensembl chr 7:129,098,786...129,127,546 		JBrowse link
G Evx2 even-skipped homeobox 2 acts_upstream_of_or_within ISO
IEA		 MGI:96205 (PMID:8978698)
GO_REF:0000107		 RGD
Ensembl		 PMID:8978698 GO_REF:0000107 NCBI chr 3:79,965,630...79,969,700
Ensembl chr 3:59,558,197...59,561,872 		JBrowse link
G Fbn2 fibrillin 2 acts_upstream_of_or_within ISO
IEA		 MGI:2157491 (PMID:10700192)
GO_REF:0000107		 RGD
Ensembl		 PMID:10700192 GO_REF:0000107 NCBI chr18:53,696,197...53,901,992
Ensembl chr18:51,499,737...51,703,976 		JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within ISO
IEA		 MGI:1859647 (PMID:9916808)
GO_REF:0000107		 RGD
Ensembl		 PMID:9916808 GO_REF:0000107 NCBI chr 2:52,533,939...52,610,980
Ensembl chr 2:50,800,992...50,876,866 		JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO
IEA		 MGI:95518 (PMID:15328019)
GO_REF:0000107		 RGD
Ensembl		 PMID:15328019 GO_REF:0000107 NCBI chr 1:254,533,504...254,539,605
Ensembl chr 1:244,584,652...244,590,359 		JBrowse link
G Flvcr1 FLVCR choline and heme transporter 1 acts_upstream_of_or_within ISO
IEA		 MGI:3776021|MGI:3776022 (PMID:18258918)
GO_REF:0000107		 RGD
Ensembl		 PMID:18258918 GO_REF:0000107 NCBI chr13:105,117,402...105,139,780
Ensembl chr13:102,586,257...102,608,661 		JBrowse link
G Gli3 GLI family zinc finger 3 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:18478223), (PMID:9354785)
GO_REF:0000107
MGI:1856276 (PMID:9268572)		 RGD
Ensembl		 PMID:9268572 PMID:9354785 PMID:18478223 GO_REF:0000107 NCBI chr17:54,134,064...54,405,198
Ensembl chr17:49,438,567...49,709,712 		JBrowse link
G Hoxd13 homeo box D13 acts_upstream_of_or_within ISO
IEA		 MGI:1857397|MGI:95462 (PMID:11543619), (PMID:8978698)
GO_REF:0000107		 RGD
Ensembl		 PMID:8978698 PMID:11543619 GO_REF:0000107 NCBI chr 3:79,978,077...79,981,393
Ensembl chr 3:59,570,646...59,573,963 		JBrowse link
G Idua alpha-L-iduronidase acts_upstream_of_or_within ISO MGI:2176236 (PMID:9097952) RGD PMID:9097952 NCBI chr14:1,175,994...1,203,913
Ensembl chr14:1,032,171...1,046,522 		JBrowse link
G Ift140 intraflagellar transport 140 acts_upstream_of_or_within ISO
IEA		 MGI:4458412 (PMID:24009529)
GO_REF:0000107		 RGD
Ensembl		 PMID:24009529 GO_REF:0000107 NCBI chr10:14,537,134...14,624,926
Ensembl chr10:14,032,648...14,120,433 		JBrowse link
G Iqce IQ motif containing E involved_in ISO (PMID:28488682) RGD PMID:28488682 NCBI chr12:13,943,290...13,982,708
Ensembl chr12:13,943,487...13,982,693 		JBrowse link
G Lmx1b LIM homeobox transcription factor 1 beta acts_upstream_of_or_within ISO MGI:2158463 (PMID:20589901) RGD PMID:20589901 NCBI chr 3:37,257,025...37,338,675
Ensembl chr 3:16,862,195...16,940,899 		JBrowse link
G Lrp5 LDL receptor related protein 5 acts_upstream_of_or_within ISO
IEA		 MGI:1298218 (PMID:15537447)
GO_REF:0000107		 RGD
Ensembl		 PMID:15537447 GO_REF:0000107 NCBI chr 1:210,243,499...210,346,886
Ensembl chr 1:200,814,250...200,917,581 		JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:1278315|MGI:2673982 (PMID:15469977), (PMID:15537447) RGD PMID:15469977 PMID:15537447 NCBI chr 4:168,997,937...169,131,716
Ensembl chr 4:167,270,353...167,400,497 		JBrowse link
G Megf8 multiple EGF-like-domains 8 involved_in ISO
IEA		 (PMID:23063620)
GO_REF:0000107		 RGD
Ensembl		 PMID:23063620 GO_REF:0000107 NCBI chr 1:90,030,057...90,079,423
Ensembl chr 1:80,902,574...80,951,613 		JBrowse link
G Nfia nuclear factor I/A involved_in IEA
ISO		 GO_REF:0000107
MGI:2449024 (PMID:29247144)		 Ensembl
RGD		 PMID:29247144 GO_REF:0000107 NCBI chr 5:117,359,006...117,897,391
Ensembl chr 5:112,436,644...112,775,885 		JBrowse link
G Npr2 natriuretic peptide receptor 2 involved_in IEA
ISO		 GO_REF:0000107
MGI:3774275 (PMID:17728275)		 Ensembl
RGD		 PMID:17728275 GO_REF:0000107 NCBI chr 5:62,678,197...62,697,360
Ensembl chr 5:57,883,171...57,901,580 		JBrowse link
G Pcnt pericentrin acts_upstream_of_or_within ISO MGI:3799303 (PMID:20096683) RGD PMID:20096683 NCBI chr20:12,189,767...12,278,179
Ensembl chr20:12,191,648...12,278,710 		JBrowse link
G Pcsk5 proprotein convertase subtilisin/kexin type 5 involved_in IEA
ISO		 GO_REF:0000107
(PMID:18519639)		 Ensembl
RGD		 PMID:18519639 GO_REF:0000107 NCBI chr 1:224,263,823...224,694,350
Ensembl chr 1:214,837,927...215,267,600 		JBrowse link
G Pkdcc protein kinase domain containing, cytoplasmic acts_upstream_of_or_within ISO
IEA		 GO:0035108 (PMID:21553379)
GO_REF:0000107		 RGD
Ensembl		 PMID:21553379 GO_REF:0000107 NCBI chr 6:17,208,171...17,217,488
Ensembl chr 6:11,455,686...11,465,556 		JBrowse link
G Prickle1 prickle planar cell polarity protein 1 involved_in ISO
IEA		 MGI:5645931 (PMID:25190059)
GO_REF:0000107		 RGD
Ensembl		 PMID:25190059 GO_REF:0000107 NCBI chr 7:126,518,587...126,614,581
Ensembl chr 7:124,639,142...124,658,113 		JBrowse link
G Ptch1 patched 1 involved_in ISO
IEA		 (PMID:8681379)
GO_REF:0000107		 RGD
Ensembl		 PMID:8681379 GO_REF:0000107 NCBI chr17:1,548,449...1,613,461
Ensembl chr17:1,542,877...1,607,333 		JBrowse link
G Rpgrip1l Rpgrip1-like acts_upstream_of_or_within ISO MGI:3716208 (PMID:17558409) RGD PMID:17558409 NCBI chr19:31,865,050...31,957,930
Ensembl chr19:15,692,150...15,785,083 		JBrowse link
G Sik3 SIK family kinase 3 acts_upstream_of_or_within ISO
IEA		 MGI:5317918 (PMID:22318228)
GO_REF:0000107		 RGD
Ensembl		 PMID:22318228 GO_REF:0000107 NCBI chr 8:55,208,969...55,419,138
Ensembl chr 8:46,311,989...46,522,444 		JBrowse link
G Tbx3 T-box transcription factor 3 involved_in
acts_upstream_of_or_within		 ISO
IEA		 MGI:5538564 (PMID:27046536)
GO_REF:0000107
MGI:2655214 (PMID:12668638)		 RGD
Ensembl		 PMID:12668638 PMID:27046536 GO_REF:0000107 NCBI chr12:42,540,378...42,555,490
Ensembl chr12:36,881,445...36,893,708 		JBrowse link
G Tbx4 T-box transcription factor 4 involved_in
acts_upstream_of_or_within		 ISO (PMID:15106123)
(PMID:15621531)		 RGD PMID:15106123 PMID:15621531 NCBI chr10:71,228,145...71,258,222
Ensembl chr10:70,731,163...70,760,825 		JBrowse link
G Vps54 VPS54 subunit of GARP complex involved_in ISO
IEA		 MGI:1857091 (PMID:24141020)
GO_REF:0000107		 RGD
Ensembl		 PMID:24141020 GO_REF:0000107 NCBI chr14:99,580,120...99,657,178
Ensembl chr14:95,378,012...95,455,857 		JBrowse link
G Wnt5a Wnt family member 5A acts_upstream_of_or_within ISO
IEA		 MGI:1857617 (PMID:19795512)
GO_REF:0000107		 RGD
Ensembl		 PMID:19795512 GO_REF:0000107 NCBI chr16:3,702,300...3,724,860
Ensembl chr16:3,697,032...3,718,234 		JBrowse link
G Zic3 Zic family member 3 involved_in ISO MGI:95729 (PMID:22234993) RGD PMID:22234993 NCBI chr  X:141,159,623...141,165,587
Ensembl chr  X:136,124,026...136,134,746 		JBrowse link
apoptotic process involved in embryonic digit morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bax BCL2 associated X, apoptosis regulator acts_upstream_of_or_within ISO
IEA		 MGI:1197519 (PMID:15967824)
GO_REF:0000107		 RGD
Ensembl		 PMID:15967824 GO_REF:0000107 NCBI chr 1:105,076,472...105,081,906
Ensembl chr 1:95,938,808...95,945,368 		JBrowse link
G Bcl2l11 Bcl2-like 11 acts_upstream_of_or_within ISO MGI:99702 (PMID:15967824) RGD PMID:15967824 NCBI chr 3:135,820,042...135,857,330
Ensembl chr 3:115,366,646...115,404,068 		JBrowse link
G Notch1 notch receptor 1 acts_upstream_of_or_within ISO
IEA		 MGI:1933835|MGI:2158470 (PMID:16245338)
GO_REF:0000107		 RGD
Ensembl		 PMID:16245338 GO_REF:0000107 NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531 		JBrowse link
embryonic digit morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alx4 ALX homeobox 4 acts_upstream_of_or_within ISO
IEA		 MGI:1857484|MGI:88180 (PMID:9268572), (PMID:9272948)
GO_REF:0000107		 RGD
Ensembl		 PMID:9268572 PMID:9272948 GO_REF:0000107 NCBI chr 3:100,067,052...100,103,624
Ensembl chr 3:79,611,719...79,648,260 		JBrowse link
G B9d1 B9 domain containing 1 acts_upstream_of_or_within ISO MGI:5301332 (PMID:22179047) RGD PMID:22179047 NCBI chr10:46,186,222...46,196,309
Ensembl chr10:46,186,691...46,196,008 		JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within ISO
IEA		 MGI:108359|MGI:95729 (PMID:9268572)
GO_REF:0000107		 RGD
Ensembl		 PMID:9268572 GO_REF:0000107 NCBI chr15:22,098,191...22,113,145
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A acts_upstream_of_or_within ISO
IEA		 MGI:88276 (PMID:20043884)
GO_REF:0000107		 RGD
Ensembl		 PMID:20043884 GO_REF:0000107 NCBI chr16:9,740,751...9,786,861
Ensembl chr16:9,736,630...9,780,616 		JBrowse link
G Bpnt2 3'(2'), 5'-bisphosphate nucleotidase 2 acts_upstream_of_or_within ISO MGI:3806990 (PMID:18539921) RGD PMID:18539921 NCBI chr 5:22,573,241...22,600,126
Ensembl chr 5:17,772,608...17,802,570 		JBrowse link
G C2cd3 C2 domain containing 3 centriole elongation regulator acts_upstream_of_or_within ISO (PMID:19004860) RGD PMID:19004860 NCBI chr 1:164,127,304...164,225,088
Ensembl chr 1:154,715,310...154,812,520 		JBrowse link
G Chst11 carbohydrate sulfotransferase 11 acts_upstream_of_or_within ISO MGI:3768254 (PMID:16079159) RGD PMID:16079159 NCBI chr 7:22,412,121...22,630,577
Ensembl chr 7:20,528,100...20,743,111 		JBrowse link
G Cplane1 ciliogenesis and planar polarity effector complex subunit 1 acts_upstream_of_or_within ISO MGI:5297398 (PMID:25877302) RGD PMID:25877302 NCBI chr 2:58,996,119...59,096,817
Ensembl chr 2:57,268,884...57,369,500 		JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within ISO
IEA		 MGI:1338938|MGI:1858008|MGI:2148594|MGI:2158470 (PMID:12923052), (PMID:20043884)
GO_REF:0000107		 RGD
Ensembl		 PMID:12923052 PMID:20043884 GO_REF:0000107 NCBI chr 8:129,517,576...129,544,661
Ensembl chr 8:120,639,995...120,667,111 		JBrowse link
G Ece1 endothelin converting enzyme 1 involved_in ISO
IEA		 (PMID:9915973)
GO_REF:0000107		 RGD
Ensembl		 PMID:9915973 GO_REF:0000107 NCBI chr 5:155,361,031...155,462,723
Ensembl chr 5:150,077,644...150,179,371 		JBrowse link
G Fbxw4 F-box and WD repeat domain containing 4 acts_upstream_of_or_within ISO MGI:1857833|MGI:1857834 (PMID:10471509), (PMID:9733575) RGD PMID:9733575 PMID:10471509 NCBI chr 1:254,375,921...254,465,173
Ensembl chr 1:244,426,896...244,514,163 		JBrowse link
G Flvcr1 FLVCR choline and heme transporter 1 acts_upstream_of_or_within ISO
IEA		 MGI:3776021 (PMID:18258918)
GO_REF:0000107		 RGD
Ensembl		 PMID:18258918 GO_REF:0000107 NCBI chr13:105,117,402...105,139,780
Ensembl chr13:102,586,257...102,608,661 		JBrowse link
G Frem2 FRAS1 related extracellular matrix 2 acts_upstream_of_or_within ISO
IEA		 MGI:3794302 (PMID:26234751)
GO_REF:0000107		 RGD
Ensembl		 PMID:26234751 GO_REF:0000107 NCBI chr 2:137,602,784...137,740,785
Ensembl chr 2:137,602,784...137,740,785 		JBrowse link
G Fuz fuzzy planar cell polarity protein acts_upstream_of_or_within ISO MGI:3531090|MGI:4346364 (PMID:19877275), (PMID:27158779) RGD PMID:19877275 PMID:27158779 NCBI chr 1:104,515,782...104,524,591
Ensembl chr 1:95,379,587...95,384,530 		JBrowse link
G Gas1 growth arrest-specific 1 acts_upstream_of_or_within ISO MGI:3711070|MGI:98297 (PMID:17504940), (PMID:17504941) RGD PMID:17504940 PMID:17504941 NCBI chr17:4,487,716...4,490,701 JBrowse link
G Gja1 gap junction protein, alpha 1 acts_upstream_of_or_within ISO MGI:2445472 (PMID:19439426) RGD PMID:19439426 NCBI chr20:36,302,490...36,315,010
Ensembl chr20:35,755,991...35,768,582 		JBrowse link
G Gli2 GLI family zinc finger 2 acts_upstream_of_or_within ISO MGI:3834146 (PMID:19056373) RGD PMID:19056373 NCBI chr13:32,499,678...32,716,418
Ensembl chr13:29,946,809...30,163,574 		JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO
IEA		 MGI:1856276|MGI:3798847|MGI:88180|MGI:96203|MGI:96204|MGI:96205 (PMID:16254602), (PMID:17714700), (PMID:19036983), (PMID:22841643), (PMID:9268572)
GO_REF:0000107		 RGD
Ensembl		 PMID:9268572 PMID:16254602 PMID:17714700 PMID:19036983 PMID:22841643 GO_REF:0000107 NCBI chr17:54,134,064...54,405,198
Ensembl chr17:49,438,567...49,709,712 		JBrowse link
G Gna12 G protein subunit alpha 12 acts_upstream_of_or_within ISO
IEA		 MGI:95776 (PMID:12077299)
GO_REF:0000107		 RGD
Ensembl		 PMID:12077299 GO_REF:0000107 NCBI chr12:18,919,629...19,000,185
Ensembl chr12:13,805,698...13,886,255 		JBrowse link
G Gnaq G protein subunit alpha q acts_upstream_of_or_within ISO MGI:95767 (PMID:12077299) RGD PMID:12077299 NCBI chr 1:222,852,453...223,098,754
Ensembl chr 1:213,424,465...213,667,672 		JBrowse link
G Grhl2 grainyhead-like transcription factor 2 acts_upstream_of_or_within ISO
IEA		 MGI:4942413 (PMID:21377456)
GO_REF:0000107		 RGD
Ensembl		 PMID:21377456 GO_REF:0000107 NCBI chr 7:70,280,360...70,415,277
Ensembl chr 7:68,400,477...68,530,258 		JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 acts_upstream_of_or_within ISO
IEA		 (PMID:12070084)
GO_REF:0000107		 RGD
Ensembl		 PMID:12070084 GO_REF:0000107 NCBI chr16:37,928,145...37,931,488
Ensembl chr16:32,917,823...32,919,891 		JBrowse link
G Hdac1 histone deacetylase 1 involved_in ISO UniProtKB:P70288 (PMID:21093383) RGD PMID:21093383 NCBI chr 5:147,138,328...147,165,387
Ensembl chr 5:141,853,989...141,881,111 		JBrowse link
G Hdac2 histone deacetylase 2 involved_in ISO UniProtKB:O09106 (PMID:21093383) RGD PMID:21093383 NCBI chr20:42,101,815...42,126,486
Ensembl chr20:40,548,250...40,571,609 		JBrowse link
G Hoxa11 homeobox A11 acts_upstream_of_or_within ISO
IEA		 MGI:96193|MGI:96203 (PMID:12869760)
GO_REF:0000107		 RGD
Ensembl		 PMID:12869760 GO_REF:0000107 NCBI chr 4:82,673,139...82,676,801
Ensembl chr 4:81,342,528...81,346,232 		JBrowse link
G Hoxc11 homeobox C11 acts_upstream_of_or_within ISO
IEA		 MGI:96172|MGI:96203 (PMID:12869760)
GO_REF:0000107		 RGD
Ensembl		 PMID:12869760 GO_REF:0000107 NCBI chr 7:135,969,707...135,973,222
Ensembl chr 7:134,091,552...134,094,738 		JBrowse link
G Hoxd11 homeobox D11 acts_upstream_of_or_within ISO MGI:95729|MGI:96172|MGI:96193|MGI:96204|MGI:96205 (PMID:12869760), (PMID:17714700), (PMID:8900279) RGD PMID:8900279 PMID:12869760 PMID:17714700 NCBI chr 3:79,992,394...79,994,688
Ensembl chr 3:59,585,039...59,586,783 		JBrowse link
G Hoxd12 homeo box D12 acts_upstream_of_or_within ISO
IEA		 MGI:95729|MGI:96203|MGI:96205 (PMID:17714700), (PMID:8900279)
GO_REF:0000107		 RGD
Ensembl		 PMID:8900279 PMID:17714700 GO_REF:0000107 NCBI chr 3:79,985,106...79,986,227
Ensembl chr 3:59,577,677...59,578,798 		JBrowse link
G Hoxd13 homeo box D13 acts_upstream_of_or_within ISO
IEA		 MGI:1918115|MGI:95729|MGI:96203|MGI:96204 (PMID:17714700), (PMID:8900279), (PMID:9342042)
GO_REF:0000107		 RGD
Ensembl		 PMID:8900279 PMID:9342042 PMID:17714700 GO_REF:0000107 NCBI chr 3:79,978,077...79,981,393
Ensembl chr 3:59,570,646...59,573,963 		JBrowse link
G Ift122 intraflagellar transport 122 acts_upstream_of_or_within ISO MGI:3578529 (PMID:15755804) RGD PMID:15755804 NCBI chr 4:150,577,525...150,648,052
Ensembl chr 4:148,905,046...148,975,458 		JBrowse link
G Ift140 intraflagellar transport 140 acts_upstream_of_or_within ISO
IEA		 MGI:4458412 (PMID:23469164)
GO_REF:0000107		 RGD
Ensembl		 PMID:23469164 GO_REF:0000107 NCBI chr10:14,537,134...14,624,926
Ensembl chr10:14,032,648...14,120,433 		JBrowse link
G Ift52 intraflagellar transport 52 acts_upstream_of_or_within ISO
IEA		 (PMID:15930098)
GO_REF:0000107		 RGD
Ensembl		 PMID:15930098 GO_REF:0000107 NCBI chr 3:172,091,591...172,116,497
Ensembl chr 3:151,672,493...151,696,980 		JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within ISO MGI:2157527|MGI:3027342|MGI:3823090|MGI:98297 (PMID:12701101), (PMID:15755804), (PMID:15930098), (PMID:16254602), (PMID:19036983) RGD PMID:12701101 PMID:15755804 PMID:15930098 PMID:16254602 PMID:19036983 NCBI chr15:35,685,678...35,786,875
Ensembl chr15:31,573,376...31,672,147 		JBrowse link
G Ihh Indian hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:17889828)
GO_REF:0000107
MGI:1347521|MGI:3842979 (PMID:20660756)		 RGD
Ensembl		 PMID:17889828 PMID:20660756 GO_REF:0000107 NCBI chr 9:83,952,986...83,959,203
Ensembl chr 9:76,504,315...76,510,532 		JBrowse link
G Intu inturned planar cell polarity protein involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:27158779)
GO_REF:0000107
(PMID:25774014)		 RGD
Ensembl		 PMID:25774014 PMID:27158779 GO_REF:0000107 NCBI chr 2:125,528,965...125,613,295
Ensembl chr 2:123,609,807...123,682,676 		JBrowse link
G Lmbr1 limb development membrane protein 1 acts_upstream_of_or_within ISO
IEA		 MGI:3579991 (PMID:11606546)
GO_REF:0000107		 RGD
Ensembl		 PMID:11606546 GO_REF:0000107 NCBI chr 4:6,649,824...6,820,525
Ensembl chr 4:5,974,750...6,146,368 		JBrowse link
G Lnpk lunapark, ER junction formation factor acts_upstream_of_or_within ISO
IEA		 MGI:96205 (PMID:9342042)
GO_REF:0000107		 RGD
Ensembl		 PMID:9342042 GO_REF:0000107 NCBI chr 3:79,826,318...79,894,514
Ensembl chr 3:59,424,286...59,486,518 		JBrowse link
G Lrp4 LDL receptor related protein 4 acts_upstream_of_or_within ISO
IEA		 MGI:2661383|MGI:3580702 (PMID:16517118)
GO_REF:0000107		 RGD
Ensembl		 PMID:16517118 GO_REF:0000107 NCBI chr 3:97,885,373...97,939,366
Ensembl chr 3:77,429,798...77,483,593 		JBrowse link
G Lrp5 LDL receptor related protein 5 acts_upstream_of_or_within ISO
IEA		 MGI:1298218 (PMID:15142971)
GO_REF:0000107		 RGD
Ensembl		 PMID:15142971 GO_REF:0000107 NCBI chr 1:210,243,499...210,346,886
Ensembl chr 1:200,814,250...200,917,581 		JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:1278315|MGI:2156191 (PMID:15142971), (PMID:19795512) RGD PMID:15142971 PMID:19795512 NCBI chr 4:168,997,937...169,131,716
Ensembl chr 4:167,270,353...167,400,497 		JBrowse link
G Map3k20 mitogen-activated protein kinase kinase kinase 20 involved_in ISO
IEA		 (PMID:26755636)
GO_REF:0000107		 RGD
Ensembl		 PMID:26755636 GO_REF:0000107 NCBI chr 3:77,538,146...77,697,540
Ensembl chr 3:57,130,551...57,289,626 		JBrowse link
G Megf8 multiple EGF-like-domains 8 acts_upstream_of_or_within ISO
IEA		 (PMID:32203821)
GO_REF:0000107		 RGD
Ensembl		 PMID:32203821 GO_REF:0000107 NCBI chr 1:90,030,057...90,079,423
Ensembl chr 1:80,902,574...80,951,613 		JBrowse link
G Mks1 MKS transition zone complex subunit 1 acts_upstream_of_or_within ISO
IEA		 MGI:4410614|MGI:4433029|MGI:4887578 (PMID:19776033), (PMID:21045211), (PMID:23454480)
GO_REF:0000107		 RGD
Ensembl		 PMID:19776033 PMID:21045211 PMID:23454480 GO_REF:0000107 NCBI chr10:73,152,599...73,167,451
Ensembl chr10:72,655,921...72,666,655 		JBrowse link
G Msx1 msh homeobox 1 acts_upstream_of_or_within ISO MGI:97169 (PMID:21465616) RGD PMID:21465616 NCBI chr14:77,185,802...77,189,735
Ensembl chr14:72,961,148...72,964,966 		JBrowse link
G Msx2 msh homeobox 2 acts_upstream_of_or_within ISO
IEA		 MGI:97168 (PMID:21465616)
GO_REF:0000107		 RGD
Ensembl		 PMID:21465616 GO_REF:0000107 NCBI chr17:11,102,284...11,107,949
Ensembl chr17:11,097,103...11,102,879 		JBrowse link
G Mycn MYCN proto-oncogene, bHLH transcription factor acts_upstream_of_or_within ISO
IEA		 (PMID:17360777)
GO_REF:0000107		 RGD
Ensembl		 PMID:17360777 GO_REF:0000107 NCBI chr 6:41,446,683...41,452,584
Ensembl chr 6:35,717,764...35,723,590 		JBrowse link
G Nog noggin involved_in IEA
ISO		 GO_REF:0000107
(PMID:10080184)		 Ensembl
RGD		 PMID:10080184 GO_REF:0000107 NCBI chr10:74,625,874...74,627,501
Ensembl chr10:74,128,712...74,130,339 		JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in ISO
IEA		 UniProtKB:Q91ZD1 (PMID:21262216)
GO_REF:0000107		 RGD
Ensembl		 PMID:21262216 GO_REF:0000107 NCBI chr 6:38,088,688...38,100,010
Ensembl chr 6:32,373,816...32,380,817 		JBrowse link
G Osr2 odd-skipped related transcription factor 2 involved_in ISO
IEA		 UniProtKB:Q9WVG7 (PMID:21262216)
GO_REF:0000107		 RGD
Ensembl		 PMID:21262216 GO_REF:0000107 NCBI chr 7:68,372,500...68,380,195
Ensembl chr 7:66,487,839...66,495,224 		JBrowse link
G Prickle1 prickle planar cell polarity protein 1 involved_in ISO
IEA		 MGI:4941929 (PMID:23913870)
GO_REF:0000107		 RGD
Ensembl		 PMID:23913870 GO_REF:0000107 NCBI chr 7:126,518,587...126,614,581
Ensembl chr 7:124,639,142...124,658,113 		JBrowse link
G Rab23 RAB23, member RAS oncogene family acts_upstream_of_or_within ISO MGI:2137533 (PMID:15755804), (PMID:9636176) RGD PMID:9636176 PMID:15755804 NCBI chr 9:43,440,047...43,463,327
Ensembl chr 9:35,944,085...35,966,927 		JBrowse link
G Ror2 receptor tyrosine kinase-like orphan receptor 2 acts_upstream_of_or_within ISO MGI:2386954|MGI:3793279|MGI:96533 (PMID:20660756) RGD PMID:20660756 NCBI chr17:12,124,749...12,300,044
Ensembl chr17:11,972,830...12,148,152 		JBrowse link
G Sall1 spalt-like transcription factor 1 involved_in ISO
IEA		 (PMID:18280297)
GO_REF:0000107
(PMID:18470945)		 RGD
Ensembl		 PMID:18280297 PMID:18470945 GO_REF:0000107 NCBI chr19:34,179,316...34,196,278
Ensembl chr19:18,007,503...18,022,705 		JBrowse link
G Sfrp2 secreted frizzled-related protein 2 acts_upstream_of_or_within ISO
IEA		 MGI:3810257 (PMID:18729207)
GO_REF:0000107		 RGD
Ensembl		 PMID:18729207 GO_REF:0000107 NCBI chr 2:171,387,536...171,395,081
Ensembl chr 2:169,089,517...169,097,063 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:11044396)
MGI:95655|MGI:98715 (PMID:15930098), (PMID:17504940), (PMID:17504941), (PMID:20660756)		 UniProt
Ensembl
RGD		 PMID:11044396 PMID:15930098 PMID:17504940 PMID:17504941 PMID:20660756 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:7,687,872...7,697,025
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Smad4 SMAD family member 4 involved_in IEA
ISO		 GO_REF:0000107
(PMID:23034633)		 Ensembl
RGD		 PMID:23034633 GO_REF:0000107 NCBI chr18:69,518,988...69,549,684
Ensembl chr18:67,243,742...67,274,438 		JBrowse link
G Tbc1d32 TBC1 domain family, member 32 acts_upstream_of_or_within ISO
IEA		 MGI:4440463 (PMID:20159594)
GO_REF:0000107		 RGD
Ensembl		 PMID:20159594 GO_REF:0000107 NCBI chr20:35,902,281...36,133,161
Ensembl chr20:35,359,863...35,590,415 		JBrowse link
G Tbx2 T-box transcription factor 2 involved_in ISO
IEA		 (PMID:15459098)
GO_REF:0000107		 RGD
Ensembl		 PMID:15459098 GO_REF:0000107 NCBI chr10:71,177,082...71,186,275
Ensembl chr10:70,679,518...70,688,529 		JBrowse link
G Tbx3 T-box transcription factor 3 involved_in
acts_upstream_of_or_within		 ISO
IEA
ISS		 (PMID:12116211), (PMID:9207801)
GO_REF:0000107
MGI:5538564 (PMID:27046536)
MGI:5538565 (PMID:23844108)
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:9207801 PMID:12116211 PMID:23844108 PMID:27046536 GO_REF:0000024 GO_REF:0000107 NCBI chr12:42,540,378...42,555,490
Ensembl chr12:36,881,445...36,893,708 		JBrowse link
G Tmem107 transmembrane protein 107 involved_in ISO (PMID:22698544) RGD PMID:22698544 NCBI chr10:54,268,218...54,273,520
Ensembl chr10:53,771,784...53,774,676 		JBrowse link
G Tmem231 transmembrane protein 231 acts_upstream_of_or_within ISO MGI:4284576 (PMID:22179047) RGD PMID:22179047 NCBI chr19:39,883,077...39,904,296
Ensembl chr19:39,883,077...39,904,269 		JBrowse link
G Traf3ip1 TRAF3 interacting protein 1 acts_upstream_of_or_within ISO
IEA		 MGI:4129326 (PMID:21945076)
GO_REF:0000107		 RGD
Ensembl		 PMID:21945076 GO_REF:0000107 NCBI chr 9:99,521,176...99,557,966
Ensembl chr 9:92,073,640...92,108,977 		JBrowse link
G Ttbk2 tau tubulin kinase 2 acts_upstream_of_or_within ISO
IEA		 MGI:5496675 (PMID:23141541)
GO_REF:0000107		 RGD
Ensembl		 PMID:23141541 GO_REF:0000107 NCBI chr 3:128,144,851...128,256,630
Ensembl chr 3:107,697,340...107,803,223 		JBrowse link
G Tulp3 TUB like protein 3 acts_upstream_of_or_within ISO
IEA		 MGI:2388066 (PMID:19286674), (PMID:19334287)
GO_REF:0000107		 RGD
Ensembl		 PMID:19286674 PMID:19334287 GO_REF:0000107 NCBI chr 4:163,276,583...163,318,297
Ensembl chr 4:161,590,479...161,632,149 		JBrowse link
G Twist1 twist family bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:3038818 (PMID:15030764) RGD PMID:15030764 NCBI chr 6:56,402,309...56,404,303
Ensembl chr 6:50,674,678...50,677,653 		JBrowse link
G Wdpcp WD repeat containing planar cell polarity effector involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:27158779)
GO_REF:0000107
MGI:5558098|MGI:5558100 (PMID:24302887)		 RGD
Ensembl		 PMID:24302887 PMID:27158779 GO_REF:0000107 NCBI chr14:99,847,463...100,178,392
Ensembl chr14:95,646,038...95,977,113 		JBrowse link
G Wnt5a Wnt family member 5A acts_upstream_of_or_within ISO
IEA		 MGI:1857617 (PMID:19795512)
GO_REF:0000107		 RGD
Ensembl		 PMID:19795512 GO_REF:0000107 NCBI chr16:3,702,300...3,724,860
Ensembl chr16:3,697,032...3,718,234 		JBrowse link
G Wnt7a Wnt family member 7A involved_in ISO
IEA		 (PMID:16826533)
GO_REF:0000107		 RGD
Ensembl		 PMID:16826533 GO_REF:0000107 NCBI chr 4:125,420,276...125,466,149
Ensembl chr 4:123,863,108...123,908,981 		JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 IMP RGD PMID:19191224 RGD:2312786 NCBI chr 8:57,885,886...58,073,507
Ensembl chr 8:48,994,566...49,177,011 		JBrowse link
embryonic forelimb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a2 aldehyde dehydrogenase 1 family, member A2 acts_upstream_of_or_within ISO
IEA		 MGI:2180721 (PMID:15069081), (PMID:20034106)
GO_REF:0000107		 RGD
Ensembl		 PMID:15069081 PMID:20034106 GO_REF:0000107 NCBI chr 8:80,758,641...80,837,891
Ensembl chr 8:71,877,850...71,957,107 		JBrowse link
G Alx3 ALX homeobox 3 acts_upstream_of_or_within ISO
IEA		 MGI:108359 (PMID:11641221)
GO_REF:0000107		 RGD
Ensembl		 PMID:11641221 GO_REF:0000107 NCBI chr 2:197,919,381...197,929,795
Ensembl chr 2:195,231,197...195,241,609 		JBrowse link
G Alx4 ALX homeobox 4 acts_upstream_of_or_within ISO
IEA		 MGI:1277097 (PMID:11641221)
GO_REF:0000107		 RGD
Ensembl		 PMID:11641221 GO_REF:0000107 NCBI chr 3:100,067,052...100,103,624
Ensembl chr 3:79,611,719...79,648,260 		JBrowse link
G Cacna1c calcium voltage-gated channel subunit alpha1 C involved_in ISO (PMID:15454078) RGD PMID:15454078 NCBI chr 4:153,431,169...154,051,932
Ensembl chr 4:151,764,138...152,379,648 		JBrowse link
G Crabp2 cellular retinoic acid binding protein 2 acts_upstream_of_or_within ISO MGI:1857508 (PMID:7720575) RGD PMID:7720575 NCBI chr 2:175,714,862...175,719,208
Ensembl chr 2:173,416,857...173,421,379 		JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within ISO
IEA		 (PMID:15371327)
GO_REF:0000107		 RGD
Ensembl		 PMID:15371327 GO_REF:0000107 NCBI chr 8:129,517,576...129,544,661
Ensembl chr 8:120,639,995...120,667,111 		JBrowse link
G En1 engrailed homeobox 1 acts_upstream_of_or_within ISO
IEA		 MGI:98961 (PMID:9362463)
GO_REF:0000107		 RGD
Ensembl		 PMID:9362463 GO_REF:0000107 NCBI chr13:34,303,684...34,309,269
Ensembl chr13:31,751,545...31,755,943 		JBrowse link
G Hoxa11 homeobox A11 acts_upstream_of_or_within ISO
IEA		 MGI:96203 (PMID:22916278)
GO_REF:0000107		 RGD
Ensembl		 PMID:22916278 GO_REF:0000107 NCBI chr 4:82,673,139...82,676,801
Ensembl chr 4:81,342,528...81,346,232 		JBrowse link
G Hoxa13 homeo box A13 acts_upstream_of_or_within ISO
IEA		 MGI:2150506 (PMID:15733672)
GO_REF:0000107		 RGD
Ensembl		 PMID:15733672 GO_REF:0000107 NCBI chr 4:82,689,566...82,691,701
Ensembl chr 4:81,358,956...81,361,091 		JBrowse link
G Hoxa9 homeobox A9 acts_upstream_of_or_within ISO MGI:96210 (PMID:8625797) RGD PMID:8625797 NCBI chr 4:82,653,847...82,659,958
Ensembl chr 4:81,323,382...81,326,358 		JBrowse link
G Hoxd11 homeobox D11 acts_upstream_of_or_within ISO MGI:96172 (PMID:22916278) RGD PMID:22916278 NCBI chr 3:79,992,394...79,994,688
Ensembl chr 3:59,585,039...59,586,783 		JBrowse link
G Hoxd9 homeo box D9 acts_upstream_of_or_within ISO
IEA		 MGI:2150414|MGI:96180 (PMID:8625797)
GO_REF:0000107		 RGD
Ensembl		 PMID:8625797 GO_REF:0000107 NCBI chr 3:80,008,006...80,010,186
Ensembl chr 3:59,600,575...59,602,754 		JBrowse link
G Ift122 intraflagellar transport 122 involved_in ISO (PMID:21209331) RGD PMID:21209331 NCBI chr 4:150,577,525...150,648,052
Ensembl chr 4:148,905,046...148,975,458 		JBrowse link
G Lnpk lunapark, ER junction formation factor acts_upstream_of_or_within ISO
IEA		 MGI:1857660 (PMID:22916278), (PMID:9342042)
GO_REF:0000107		 RGD
Ensembl		 PMID:9342042 PMID:22916278 GO_REF:0000107 NCBI chr 3:79,826,318...79,894,514
Ensembl chr 3:59,424,286...59,486,518 		JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:1922667|MGI:2156191|MGI:4415718|MGI:98961 (PMID:11029008), (PMID:15880584), (PMID:18256198), (PMID:19653321) RGD PMID:11029008 PMID:15880584 PMID:18256198 PMID:19653321 NCBI chr 4:168,997,937...169,131,716
Ensembl chr 4:167,270,353...167,400,497 		JBrowse link
G Mecom MDS1 and EVI1 complex locus acts_upstream_of_or_within ISO MGI:2158381 (PMID:17029558) RGD PMID:17029558 NCBI chr 2:114,837,815...115,393,052
Ensembl chr 2:112,909,321...113,464,590 		JBrowse link
G Msx1 msh homeobox 1 acts_upstream_of_or_within ISO MGI:97169 (PMID:21465616) RGD PMID:21465616 NCBI chr14:77,185,802...77,189,735
Ensembl chr14:72,961,148...72,964,966 		JBrowse link
G Msx2 msh homeobox 2 acts_upstream_of_or_within ISO
IEA		 MGI:97168 (PMID:21465616)
GO_REF:0000107		 RGD
Ensembl		 PMID:21465616 GO_REF:0000107 NCBI chr17:11,102,284...11,107,949
Ensembl chr17:11,097,103...11,102,879 		JBrowse link
G Nipbl NIPBL, cohesin loading factor involved_in ISO
IEA		 (PMID:19242925), (PMID:8291537)
GO_REF:0000107		 RGD
Ensembl		 PMID:8291537 PMID:19242925 GO_REF:0000107 NCBI chr 2:59,126,676...59,314,841
Ensembl chr 2:57,399,445...57,565,899 		JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in ISO
IEA		 UniProtKB:Q91ZD1 (PMID:21262216)
GO_REF:0000107		 RGD
Ensembl		 PMID:21262216 GO_REF:0000107 NCBI chr 6:38,088,688...38,100,010
Ensembl chr 6:32,373,816...32,380,817 		JBrowse link
G Osr2 odd-skipped related transcription factor 2 involved_in ISO
IEA		 UniProtKB:Q9WVG7 (PMID:11520675), (PMID:21262216)
GO_REF:0000107		 RGD
Ensembl		 PMID:11520675 PMID:21262216 GO_REF:0000107 NCBI chr 7:68,372,500...68,380,195
Ensembl chr 7:66,487,839...66,495,224 		JBrowse link
G Rdh10 retinol dehydrogenase 10 acts_upstream_of_or_within ISO
IEA		 (PMID:17473173)
GO_REF:0000107		 RGD
Ensembl		 PMID:17473173 GO_REF:0000107 NCBI chr 5:7,969,931...7,998,834
Ensembl chr 5:3,188,445...3,215,572 		JBrowse link
G Reck reversion-inducing-cysteine-rich protein with kazal motifs acts_upstream_of_or_within ISO
IEA		 MGI:4830337 (PMID:23213437)
GO_REF:0000107		 RGD
Ensembl		 PMID:23213437 GO_REF:0000107 NCBI chr 5:62,898,717...62,965,274
Ensembl chr 5:58,102,981...58,169,502 		JBrowse link
G Rpgrip1l Rpgrip1-like acts_upstream_of_or_within ISO MGI:3716208 (PMID:17553904) RGD PMID:17553904 NCBI chr19:31,865,050...31,957,930
Ensembl chr19:15,692,150...15,785,083 		JBrowse link
G Rspo2 R-spondin 2 acts_upstream_of_or_within ISO
IEA		 MGI:1298218|MGI:3045965 (PMID:18256198)
GO_REF:0000107		 RGD
Ensembl		 PMID:18256198 GO_REF:0000107 NCBI chr 7:75,987,217...76,123,984
Ensembl chr 7:74,103,090...74,238,933 		JBrowse link
G Runx2 RUNX family transcription factor 2 acts_upstream_of_or_within ISO MGI:2176466 (PMID:22916278) RGD PMID:22916278 NCBI chr 9:23,661,278...23,990,248
Ensembl chr 9:16,167,482...16,492,167 		JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO
IEA		 MGI:1857796 (PMID:11118883), (PMID:11476582)
GO_REF:0000107		 RGD
Ensembl		 PMID:11118883 PMID:11476582 GO_REF:0000107 NCBI chr 4:7,687,872...7,697,025
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Shox2 SHOX homeobox 2 acts_upstream_of_or_within ISO
IEA		 (PMID:22916278)
GO_REF:0000107		 RGD
Ensembl		 PMID:22916278 GO_REF:0000107 NCBI chr 2:153,524,324...153,537,571
Ensembl chr 2:151,217,552...151,227,143 		JBrowse link
G Tbx3 T-box transcription factor 3 involved_in ISO
IEA
ISS		 (PMID:12116211)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:12116211 GO_REF:0000024 GO_REF:0000107 NCBI chr12:42,540,378...42,555,490
Ensembl chr12:36,881,445...36,893,708 		JBrowse link
G Tbx5 T-box transcription factor 5 involved_in
acts_upstream_of_or_within		 ISO
IEA
ISS		 (PMID:16183809)
GO_REF:0000107
MGI:2387851 (PMID:11572777), (PMID:12490567)
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:11572777 PMID:12490567 PMID:16183809 GO_REF:0000024 GO_REF:0000107 NCBI chr12:42,342,926...42,399,723
Ensembl chr12:36,688,014...36,734,885 		JBrowse link
G Tfap2a transcription factor AP-2 alpha involved_in ISS
ISO		 GO_REF:0000024
(PMID:9811866)		 UniProt
RGD		 PMID:9811866 GO_REF:0000024 NCBI chr17:24,230,064...24,253,219
Ensembl chr17:24,024,432...24,047,507 		JBrowse link
G Tp63 tumor protein p63 acts_upstream_of_or_within ISO
IEA		 MGI:5882553|MGI:5882555 (PMID:25503409)
GO_REF:0000107		 RGD
Ensembl		 PMID:25503409 GO_REF:0000107 NCBI chr11:88,343,647...88,554,543
Ensembl chr11:74,838,859...75,049,398 		JBrowse link
G Twist1 twist family bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:1857265 (PMID:12175489) RGD PMID:12175489 NCBI chr 6:56,402,309...56,404,303
Ensembl chr 6:50,674,678...50,677,653 		JBrowse link
G Wnt3 Wnt family member 3 acts_upstream_of_or_within ISO MGI:2450902|MGI:2450903 (PMID:12569130) RGD PMID:12569130 NCBI chr10:89,180,224...89,224,195
Ensembl chr10:88,680,248...88,724,099 		JBrowse link
G Wnt7a Wnt family member 7A involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:16826533)
GO_REF:0000107
MGI:1298218|MGI:1857009|MGI:95389 (PMID:15880584), (PMID:9362463)		 RGD
Ensembl		 PMID:9362463 PMID:15880584 PMID:16826533 GO_REF:0000107 MGI:48652 NCBI chr 4:125,420,276...125,466,149
Ensembl chr 4:123,863,108...123,908,981 		JBrowse link
G Wnt9a Wnt family member 9A acts_upstream_of_or_within ISO (PMID:15371327) RGD PMID:15371327 NCBI chr10:44,593,691...44,620,682
Ensembl chr10:44,094,140...44,121,133 		JBrowse link
embryonic hindlimb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aff3 ALF transcription elongation factor 3 involved_in ISO
IEA		 (PMID:18616733)
GO_REF:0000107		 RGD
Ensembl		 PMID:18616733 GO_REF:0000107 NCBI chr 9:47,894,903...48,352,380
Ensembl chr 9:40,404,375...40,857,247 		JBrowse link
G Alx3 ALX homeobox 3 acts_upstream_of_or_within ISO
IEA		 MGI:108359 (PMID:11641221)
GO_REF:0000107		 RGD
Ensembl		 PMID:11641221 GO_REF:0000107 NCBI chr 2:197,919,381...197,929,795
Ensembl chr 2:195,231,197...195,241,609 		JBrowse link
G Alx4 ALX homeobox 4 acts_upstream_of_or_within ISO
IEA		 MGI:1277097 (PMID:11641221)
GO_REF:0000107		 RGD
Ensembl		 PMID:11641221 GO_REF:0000107 NCBI chr 3:100,067,052...100,103,624
Ensembl chr 3:79,611,719...79,648,260 		JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within ISO
IEA		 MGI:104903 (PMID:10964473)
GO_REF:0000107		 RGD
Ensembl		 PMID:10964473 GO_REF:0000107 NCBI chr15:22,098,191...22,113,145
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 acts_upstream_of_or_within ISO
IEA		 MGI:3588650 (PMID:16207732)
GO_REF:0000107		 RGD
Ensembl		 PMID:16207732 GO_REF:0000107 NCBI chr 5:26,609,245...26,792,736
Ensembl chr 5:21,812,070...21,995,358 		JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within ISO
IEA		 MGI:2148567|MGI:2148594|MGI:2158470 (PMID:12923052), (PMID:18231602)
GO_REF:0000107		 RGD
Ensembl		 PMID:12923052 PMID:18231602 GO_REF:0000107 NCBI chr 8:129,517,576...129,544,661
Ensembl chr 8:120,639,995...120,667,111 		JBrowse link
G Dicer1 dicer 1 ribonuclease III acts_upstream_of_or_within ISO MGI:2450929|MGI:3589208 (PMID:16319892) RGD PMID:16319892 NCBI chr 6:129,392,298...129,457,252
Ensembl chr 6:123,631,250...123,693,965 		JBrowse link
G Fgf4 fibroblast growth factor 4 acts_upstream_of_or_within ISO
IEA		 MGI:99604 (PMID:16245339)
GO_REF:0000107		 RGD
Ensembl		 PMID:16245339 GO_REF:0000107 NCBI chr 1:209,453,229...209,457,085
Ensembl chr 1:200,024,056...200,025,466 		JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO
IEA		 MGI:95518 (PMID:16245339)
GO_REF:0000107		 RGD
Ensembl		 PMID:16245339 GO_REF:0000107 NCBI chr 1:254,533,504...254,539,605
Ensembl chr 1:244,584,652...244,590,359 		JBrowse link
G Gnas GNAS complex locus acts_upstream_of_or_within ISO
IEA		 MGI:3043361 (PMID:15797856)
GO_REF:0000107		 RGD
Ensembl		 PMID:15797856 GO_REF:0000107 NCBI chr 3:183,489,648...183,554,570
Ensembl chr 3:163,071,417...163,127,262
Ensembl chr 3:163,071,417...163,127,262 		JBrowse link
G Gpc3 glypican 3 acts_upstream_of_or_within ISO
IEA		 MGI:88180 (PMID:10964473)
GO_REF:0000107		 RGD
Ensembl		 PMID:10964473 GO_REF:0000107 NCBI chr  X:136,789,770...137,157,598
Ensembl chr  X:131,868,990...132,236,798 		JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:1922667|MGI:4415718|MGI:98961 (PMID:15880584), (PMID:18256198), (PMID:19653321) RGD PMID:15880584 PMID:18256198 PMID:19653321 NCBI chr 4:168,997,937...169,131,716
Ensembl chr 4:167,270,353...167,400,497 		JBrowse link
G Mecom MDS1 and EVI1 complex locus acts_upstream_of_or_within ISO MGI:2158381 (PMID:17029558) RGD PMID:17029558 NCBI chr 2:114,837,815...115,393,052
Ensembl chr 2:112,909,321...113,464,590 		JBrowse link
G Med1 mediator complex subunit 1 acts_upstream_of_or_within ISO
IEA		 MGI:2684189 (PMID:14500757)
GO_REF:0000107		 RGD
Ensembl		 PMID:14500757 GO_REF:0000107 NCBI chr10:83,641,851...83,685,560
Ensembl chr10:83,145,568...83,189,299 		JBrowse link
G Mmp13 matrix metallopeptidase 13 IEP RGD PMID:11850435 RGD:1582550 NCBI chr 8:12,782,829...12,793,108
Ensembl chr 8:4,497,960...4,508,239 		JBrowse link
G Msx1 msh homeobox 1 acts_upstream_of_or_within ISO MGI:97169 (PMID:21465616) RGD PMID:21465616 NCBI chr14:77,185,802...77,189,735
Ensembl chr14:72,961,148...72,964,966 		JBrowse link
G Msx2 msh homeobox 2 acts_upstream_of_or_within ISO
IEA		 MGI:97168 (PMID:21465616)
GO_REF:0000107		 RGD
Ensembl		 PMID:21465616 GO_REF:0000107 NCBI chr17:11,102,284...11,107,949
Ensembl chr17:11,097,103...11,102,879 		JBrowse link
G Notch1 notch receptor 1 acts_upstream_of_or_within ISO
IEA		 MGI:1933835|MGI:2158470 (PMID:16245338)
GO_REF:0000107		 RGD
Ensembl		 PMID:16245338 GO_REF:0000107 NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531 		JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in ISO
IEA		 UniProtKB:Q91ZD1 (PMID:21262216)
GO_REF:0000107		 RGD
Ensembl		 PMID:21262216 GO_REF:0000107 NCBI chr 6:38,088,688...38,100,010
Ensembl chr 6:32,373,816...32,380,817 		JBrowse link
G Osr2 odd-skipped related transcription factor 2 involved_in ISO
IEA		 UniProtKB:Q9WVG7 (PMID:11520675), (PMID:21262216)
GO_REF:0000107		 RGD
Ensembl		 PMID:11520675 PMID:21262216 GO_REF:0000107 NCBI chr 7:68,372,500...68,380,195
Ensembl chr 7:66,487,839...66,495,224 		JBrowse link
G Pitx1 paired-like homeodomain 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:109340 (PMID:18231602)
GO_REF:0000107
(PMID:22071103)		 RGD
Ensembl		 PMID:18231602 PMID:22071103 GO_REF:0000107 NCBI chr17:8,794,051...8,805,477
Ensembl chr17:8,794,134...8,800,291 		JBrowse link
G Pitx2 paired-like homeodomain 2 acts_upstream_of_or_within ISO MGI:107374 (PMID:18231602) RGD PMID:18231602 NCBI chr 2:220,391,417...220,411,588
Ensembl chr 2:217,717,693...217,737,293 		JBrowse link
G Rarb retinoic acid receptor, beta acts_upstream_of_or_within ISO
IEA		 MGI:97858 (PMID:10075839)
GO_REF:0000107		 RGD
Ensembl		 PMID:10075839 GO_REF:0000107 NCBI chr15:10,837,252...11,482,037
Ensembl chr15:8,406,492...9,051,288 		JBrowse link
G Rarg retinoic acid receptor, gamma acts_upstream_of_or_within ISO
IEA		 MGI:97857 (PMID:10075839)
GO_REF:0000107		 RGD
Ensembl		 PMID:10075839 GO_REF:0000107 NCBI chr 7:135,246,427...135,268,889
Ensembl chr 7:133,367,833...133,390,177 		JBrowse link
G Rpgrip1l Rpgrip1-like acts_upstream_of_or_within ISO MGI:3716208 (PMID:17553904) RGD PMID:17553904 NCBI chr19:31,865,050...31,957,930
Ensembl chr19:15,692,150...15,785,083 		JBrowse link
G Rspo2 R-spondin 2 acts_upstream_of_or_within ISO
IEA		 MGI:1298218|MGI:3045965 (PMID:18256198)
GO_REF:0000107		 RGD
Ensembl		 PMID:18256198 GO_REF:0000107 NCBI chr 7:75,987,217...76,123,984
Ensembl chr 7:74,103,090...74,238,933 		JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO
IEA		 MGI:1857796 (PMID:11118883)
GO_REF:0000107		 RGD
Ensembl		 PMID:11118883 GO_REF:0000107 NCBI chr 4:7,687,872...7,697,025
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Smarca4 SWI/SNF related BAF chromatin remodeling complex subunit ATPase 4 acts_upstream_of_or_within ISO MGI:2177413|MGI:3605892 (PMID:16192310) RGD PMID:16192310 NCBI chr 8:28,438,370...28,535,071
Ensembl chr 8:20,167,717...20,258,975 		JBrowse link
G Tbx3 T-box transcription factor 3 acts_upstream_of_or_within ISO
IEA		 MGI:5538565 (PMID:23844108)
GO_REF:0000107		 RGD
Ensembl		 PMID:23844108 GO_REF:0000107 NCBI chr12:42,540,378...42,555,490
Ensembl chr12:36,881,445...36,893,708 		JBrowse link
G Tbx4 T-box transcription factor 4 involved_in ISO (PMID:31761294) RGD PMID:31761294 NCBI chr10:71,228,145...71,258,222
Ensembl chr10:70,731,163...70,760,825 		JBrowse link
G Tp63 tumor protein p63 acts_upstream_of_or_within ISO
IEA		 MGI:5882553|MGI:5882555 (PMID:25503409)
GO_REF:0000107		 RGD
Ensembl		 PMID:25503409 GO_REF:0000107 NCBI chr11:88,343,647...88,554,543
Ensembl chr11:74,838,859...75,049,398 		JBrowse link
G Twist1 twist family bHLH transcription factor 1 involved_in ISO (PMID:8988167) RGD PMID:8988167 NCBI chr 6:56,402,309...56,404,303
Ensembl chr 6:50,674,678...50,677,653 		JBrowse link
G Wnt3 Wnt family member 3 acts_upstream_of_or_within ISO MGI:2450902|MGI:2450903 (PMID:12569130) RGD PMID:12569130 NCBI chr10:89,180,224...89,224,195
Ensembl chr10:88,680,248...88,724,099 		JBrowse link
G Wnt7a Wnt family member 7A involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:16826533)
GO_REF:0000107
MGI:1298218 (PMID:15880584)		 RGD
Ensembl		 PMID:15880584 PMID:16826533 GO_REF:0000107 NCBI chr 4:125,420,276...125,466,149
Ensembl chr 4:123,863,108...123,908,981 		JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 acts_upstream_of_or_within IMP
IEA
ISO		 GO_REF:0000107
MGI:2182708 (PMID:10835630)		 Ensembl
RGD		 PMID:10835630 PMID:19191224 GO_REF:0000107, RGD:2312786 NCBI chr 8:57,885,886...58,073,507
Ensembl chr 8:48,994,566...49,177,011 		JBrowse link
embryonic limb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acd ACD, shelterin complex subunit and telomerase recruitment factor acts_upstream_of_or_within ISO
IEA		 MGI:1856658 (PMID:15537664)
GO_REF:0000107		 RGD
Ensembl		 PMID:15537664 GO_REF:0000107 NCBI chr19:50,496,634...50,499,397
Ensembl chr19:33,586,745...33,589,461 		JBrowse link
G Aldh1a2 aldehyde dehydrogenase 1 family, member A2 acts_upstream_of_or_within ISO
IEA		 MGI:2180721 (PMID:14623241)
GO_REF:0000107		 RGD
Ensembl		 PMID:14623241 GO_REF:0000107 NCBI chr 8:80,758,641...80,837,891
Ensembl chr 8:71,877,850...71,957,107 		JBrowse link
G Alx1 ALX homeobox 1 acts_upstream_of_or_within ISO
IEA		 MGI:108359 (PMID:9847249)
GO_REF:0000107		 RGD
Ensembl		 PMID:9847249 GO_REF:0000107 NCBI chr 7:40,044,185...40,063,778
Ensembl chr 7:38,147,117...38,177,220 		JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within ISO
IEA		 MGI:103302|MGI:1857137 (PMID:9664686)
GO_REF:0000107		 RGD
Ensembl		 PMID:9664686 GO_REF:0000107 NCBI chr15:22,098,191...22,113,145
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
G Bmp7 bone morphogenetic protein 7 acts_upstream_of_or_within ISO
IEA		 MGI:1934010|MGI:88180 (PMID:9664686)
GO_REF:0000107		 RGD
Ensembl		 PMID:9664686 GO_REF:0000107 NCBI chr 3:182,059,318...182,135,273
Ensembl chr 3:161,516,462...161,716,788 		JBrowse link
G C2cd3 C2 domain containing 3 centriole elongation regulator acts_upstream_of_or_within ISO (PMID:19004860) RGD PMID:19004860 NCBI chr 1:164,127,304...164,225,088
Ensembl chr 1:154,715,310...154,812,520 		JBrowse link
G Chst11 carbohydrate sulfotransferase 11 acts_upstream_of_or_within ISO MGI:3768254 (PMID:16079159) RGD PMID:16079159 NCBI chr 7:22,412,121...22,630,577
Ensembl chr 7:20,528,100...20,743,111 		JBrowse link
G Cyp26b1 cytochrome P450, family 26, subfamily b, polypeptide 1 acts_upstream_of_or_within ISO
IEA		 MGI:3039046 (PMID:15030763)
GO_REF:0000107		 RGD
Ensembl		 PMID:15030763 GO_REF:0000107 NCBI chr 4:118,599,356...118,616,176
Ensembl chr 4:117,041,808...117,058,628 		JBrowse link
G Dicer1 dicer 1 ribonuclease III acts_upstream_of_or_within ISO MGI:2450929|MGI:3589208 (PMID:16040801) RGD PMID:16040801 NCBI chr 6:129,392,298...129,457,252
Ensembl chr 6:123,631,250...123,693,965 		JBrowse link
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 acts_upstream_of_or_within ISO
IEA		 MGI:95389|MGI:98961 (PMID:15242796)
GO_REF:0000107		 RGD
Ensembl		 PMID:15242796 GO_REF:0000107 NCBI chr 1:237,794,969...237,798,650
Ensembl chr 1:228,381,521...228,385,202 		JBrowse link
G Dlx5 distal-less homeobox 5 acts_upstream_of_or_within ISO
IEA		 MGI:101927|MGI:1330810 (PMID:12112878), (PMID:18326838)
GO_REF:0000107		 RGD
Ensembl		 PMID:12112878 PMID:18326838 GO_REF:0000107 NCBI chr 4:35,965,579...35,969,973
Ensembl chr 4:34,999,139...35,003,407 		JBrowse link
G Dlx6 distal-less homeobox 6 acts_upstream_of_or_within ISO
IEA		 MGI:101926|MGI:1330810 (PMID:12112878), (PMID:18326838)
GO_REF:0000107		 RGD
Ensembl		 PMID:12112878 PMID:18326838 GO_REF:0000107 NCBI chr 4:35,951,005...35,956,354
Ensembl chr 4:34,984,232...34,991,343 		JBrowse link
G Dync2h1 dynein cytoplasmic 2 heavy chain 1 acts_upstream_of_or_within ISO
IEA		 (PMID:16229832)
GO_REF:0000107		 RGD
Ensembl		 PMID:16229832 GO_REF:0000107 NCBI chr 8:12,473,955...12,697,075
Ensembl chr 8:4,189,257...4,412,183 		JBrowse link
G En1 engrailed homeobox 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:1329040|MGI:1857163|MGI:98961 (PMID:15242796), (PMID:8684466)
GO_REF:0000107
(PMID:7624797)		 RGD
Ensembl		 PMID:7624797 PMID:8684466 PMID:15242796 GO_REF:0000107 NCBI chr13:34,303,684...34,309,269
Ensembl chr13:31,751,545...31,755,943 		JBrowse link
G Fbn2 fibrillin 2 acts_upstream_of_or_within ISO
IEA		 MGI:1935122|MGI:1935123|MGI:2157491 (PMID:11285249), (PMID:11350121)
GO_REF:0000107		 RGD
Ensembl		 PMID:11285249 PMID:11350121 GO_REF:0000107 NCBI chr18:53,696,197...53,901,992
Ensembl chr18:51,499,737...51,703,976 		JBrowse link
G Fgf4 fibroblast growth factor 4 acts_upstream_of_or_within ISO
IEA		 MGI:99604 (PMID:15328019)
GO_REF:0000107		 RGD
Ensembl		 PMID:15328019 GO_REF:0000107 NCBI chr 1:209,453,229...209,457,085
Ensembl chr 1:200,024,056...200,025,466 		JBrowse link
G Fgf9 fibroblast growth factor 9 acts_upstream_of_or_within ISO MGI:2135961 (PMID:17576930) RGD PMID:17576930 NCBI chr15:36,325,552...36,369,995
Ensembl chr15:32,210,074...32,253,309 		JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 acts_upstream_of_or_within ISO
IEA		 MGI:2176216|MGI:2181474 (PMID:16207751)
GO_REF:0000107		 RGD
Ensembl		 PMID:16207751 GO_REF:0000107 NCBI chr16:73,194,631...73,249,855
Ensembl chr16:66,494,042...66,547,350 		JBrowse link
G Fras1 Fraser extracellular matrix complex subunit 1 acts_upstream_of_or_within ISO
IEA		 MGI:5463442 (PMID:23469164)
GO_REF:0000107		 RGD
Ensembl		 PMID:23469164 GO_REF:0000107 NCBI chr14:12,791,407...13,200,862
Ensembl chr14:12,793,599...13,200,726 		JBrowse link
G Gdf5 growth differentiation factor 5 acts_upstream_of_or_within ISO
IEA		 MGI:1855974 (PMID:15542031)
GO_REF:0000107		 RGD
Ensembl		 PMID:15542031 GO_REF:0000107 NCBI chr 3:164,914,401...164,918,593
Ensembl chr 3:144,454,338...144,458,612 		JBrowse link
G Gja5 gap junction protein, alpha 5 acts_upstream_of_or_within ISO
IEA		 MGI:2445466 (PMID:15923624)
GO_REF:0000107		 RGD
Ensembl		 PMID:15923624 GO_REF:0000107 NCBI chr 2:187,291,227...187,310,770
Ensembl chr 2:184,564,475...184,621,952 		JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO
IEA		 MGI:1856276|MGI:96533|MGI:98297 (PMID:12142027), (PMID:12435361), (PMID:12435627), (PMID:16284117), (PMID:19422820), (PMID:19809516), (PMID:8387379)
GO_REF:0000107		 RGD
Ensembl		 PMID:8387379 PMID:12142027 PMID:12435361 PMID:12435627 PMID:16284117 More... GO_REF:0000107 NCBI chr17:54,134,064...54,405,198
Ensembl chr17:49,438,567...49,709,712 		JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist acts_upstream_of_or_within ISO MGI:3054923 (PMID:12808456) RGD PMID:12808456 NCBI chr 3:120,966,639...120,978,319
Ensembl chr 3:100,512,313...100,524,082 		JBrowse link
G Hnf1a HNF1 homeobox A acts_upstream_of_or_within ISO
IEA		 MGI:96770 (PMID:10090727)
GO_REF:0000107		 RGD
Ensembl		 PMID:10090727 GO_REF:0000107 NCBI chr12:47,299,171...47,333,457
Ensembl chr12:41,645,587...41,672,104 		JBrowse link
G Hoxa10 homeobox A10 acts_upstream_of_or_within ISO
IEA		 MGI:96192|MGI:96202 (PMID:12869760)
GO_REF:0000107		 RGD
Ensembl		 PMID:12869760 GO_REF:0000107 NCBI chr 4:82,662,204...82,671,490
Ensembl chr 4:81,331,591...81,340,919 		JBrowse link
G Hoxa11 homeobox A11 acts_upstream_of_or_within ISO
IEA		 MGI:96203 (PMID:14668414)
GO_REF:0000107		 RGD
Ensembl		 PMID:14668414 GO_REF:0000107 NCBI chr 4:82,673,139...82,676,801
Ensembl chr 4:81,342,528...81,346,232 		JBrowse link
G Hoxc10 homeo box C10 acts_upstream_of_or_within ISO
IEA		 MGI:96171|MGI:96202 (PMID:12869760)
GO_REF:0000107		 RGD
Ensembl		 PMID:12869760 GO_REF:0000107 NCBI chr 7:135,982,222...135,987,442
Ensembl chr 7:134,103,643...134,108,966 		JBrowse link
G Hoxd10 homeo box D10 acts_upstream_of_or_within ISO
IEA		 MGI:96171|MGI:96192 (PMID:12869760)
GO_REF:0000107		 RGD
Ensembl		 PMID:12869760 GO_REF:0000107 NCBI chr 3:80,001,947...80,005,156
Ensembl chr 3:59,594,516...59,597,725 		JBrowse link
G Hoxd11 homeobox D11 acts_upstream_of_or_within ISO MGI:96172 (PMID:14668414) RGD PMID:14668414 NCBI chr 3:79,992,394...79,994,688
Ensembl chr 3:59,585,039...59,586,783 		JBrowse link
G Hoxd13 homeo box D13 acts_upstream_of_or_within ISO
IEA		 MGI:1857397 (PMID:11850178)
GO_REF:0000107		 RGD
Ensembl		 PMID:11850178 GO_REF:0000107 NCBI chr 3:79,978,077...79,981,393
Ensembl chr 3:59,570,646...59,573,963 		JBrowse link
G Jag2 jagged canonical Notch ligand 2 involved_in NAS PMID:8948600 UniProt PMID:8948600 RGD:69864 NCBI chr 6:137,804,133...137,826,738
Ensembl chr 6:131,983,056...132,005,818 		JBrowse link
G Lef1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within ISO
IEA		 MGI:98504 (PMID:10090727)
GO_REF:0000107		 RGD
Ensembl		 PMID:10090727 GO_REF:0000107 NCBI chr 2:222,340,541...222,453,931
Ensembl chr 2:219,666,592...219,779,794 		JBrowse link
G Lrp4 LDL receptor related protein 4 acts_upstream_of_or_within ISO
IEA		 MGI:3621893|MGI:3707726|MGI:3707955 (PMID:16207730), (PMID:17119023)
GO_REF:0000107		 RGD
Ensembl		 PMID:16207730 PMID:17119023 GO_REF:0000107 NCBI chr 3:97,885,373...97,939,366
Ensembl chr 3:77,429,798...77,483,593 		JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:1921749 (PMID:20359476) RGD PMID:20359476 NCBI chr 4:168,997,937...169,131,716
Ensembl chr 4:167,270,353...167,400,497 		JBrowse link
G Mbnl1 muscleblind-like splicing regulator 1 involved_in ISO (PMID:12915312) RGD PMID:12915312 NCBI chr 2:146,789,570...146,964,136
Ensembl chr 2:144,670,285...144,814,368 		JBrowse link
G Megf8 multiple EGF-like-domains 8 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:24052814)		 CAFA
Ensembl
RGD		 PMID:24052814 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:90,030,057...90,079,423
Ensembl chr 1:80,902,574...80,951,613 		JBrowse link
G Mosmo modulator of smoothened acts_upstream_of_or_within ISO
IEA		 (PMID:34486668)
GO_REF:0000107		 RGD
Ensembl		 PMID:34486668 GO_REF:0000107 NCBI chr 1:175,217,680...175,288,521
Ensembl chr 1:175,217,545...175,288,334 		JBrowse link
G Msx1 msh homeobox 1 acts_upstream_of_or_within ISO MGI:97169|MGI:98297 (PMID:15930102), (PMID:19422820) RGD PMID:15930102 PMID:19422820 NCBI chr14:77,185,802...77,189,735
Ensembl chr14:72,961,148...72,964,966 		JBrowse link
G Msx2 msh homeobox 2 acts_upstream_of_or_within ISO
IEA		 MGI:97168|MGI:98297 (PMID:15930102), (PMID:19422820)
GO_REF:0000107		 RGD
Ensembl		 PMID:15930102 PMID:19422820 GO_REF:0000107 NCBI chr17:11,102,284...11,107,949
Ensembl chr17:11,097,103...11,102,879 		JBrowse link
G Mustn1 musculoskeletal, embryonic nuclear protein 1 IEP RGD PMID:14718386 RGD:1302424 NCBI chr16:6,079,355...6,081,608
Ensembl chr16:6,072,833...6,075,161 		JBrowse link
G Notch1 notch receptor 1 acts_upstream_of_or_within ISO
IEA		 MGI:97364 (PMID:16169548)
GO_REF:0000107		 RGD
Ensembl		 PMID:16169548 GO_REF:0000107 NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531 		JBrowse link
G Notch2 notch receptor 2 acts_upstream_of_or_within ISO
IEA		 MGI:97363 (PMID:16169548)
GO_REF:0000107		 RGD
Ensembl		 PMID:16169548 GO_REF:0000107 NCBI chr 2:188,299,336...188,432,823
Ensembl chr 2:185,610,589...185,744,088 		JBrowse link
G Pbx1 PBX homeobox 1 acts_upstream_of_or_within ISO
IEA		 MGI:1341793 (PMID:16672333)
GO_REF:0000107		 RGD
Ensembl		 PMID:16672333 GO_REF:0000107 NCBI chr13:82,811,664...83,121,447
Ensembl chr13:80,278,770...80,588,594 		JBrowse link
G Pbx2 PBX homeobox 2 acts_upstream_of_or_within ISO MGI:97495 (PMID:16672333) RGD PMID:16672333 NCBI chr20:4,156,107...4,161,503
Ensembl chr20:4,151,500...4,156,425 		JBrowse link
G Prickle1 prickle planar cell polarity protein 1 involved_in ISO
IEA		 MGI:4941929 (PMID:23913870)
GO_REF:0000107		 RGD
Ensembl		 PMID:23913870 GO_REF:0000107 NCBI chr 7:126,518,587...126,614,581
Ensembl chr 7:124,639,142...124,658,113 		JBrowse link
G Prrx1 paired related homeobox 1 acts_upstream_of_or_within ISO
IEA		 MGI:98218 (PMID:9729491), (PMID:9882503)
GO_REF:0000107		 RGD
Ensembl		 PMID:9729491 PMID:9882503 GO_REF:0000107 NCBI chr13:78,136,783...78,205,379
Ensembl chr13:75,601,706...75,670,866 		JBrowse link
G Prrx2 paired related homeobox 2 acts_upstream_of_or_within ISO MGI:97712 (PMID:9729491), (PMID:9882503) RGD PMID:9729491 PMID:9882503 NCBI chr 3:34,530,331...34,566,284
Ensembl chr 3:14,094,004...14,168,535 		JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within ISO
IEA		 MGI:109284 (PMID:16169548)
GO_REF:0000107		 RGD
Ensembl		 PMID:16169548 GO_REF:0000107 NCBI chr 6:109,054,160...109,106,191
Ensembl chr 6:103,323,120...103,371,650 		JBrowse link
G Psen2 presenilin 2 acts_upstream_of_or_within ISO MGI:1202717 (PMID:16169548) RGD PMID:16169548 NCBI chr13:94,499,451...94,528,419
Ensembl chr13:91,967,983...91,993,174 		JBrowse link
G Ptch1 patched 1 involved_in
acts_upstream_of_or_within		 ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
MGI:1856954|MGI:98297 (PMID:11389830), (PMID:11784021)		 UniProt
Ensembl
RGD		 PMID:11389830 PMID:11784021 GO_REF:0000024 GO_REF:0000107 NCBI chr17:1,548,449...1,613,461
Ensembl chr17:1,542,877...1,607,333 		JBrowse link
G Sall4 spalt-like transcription factor 4 acts_upstream_of_or_within ISO
IEA		 MGI:102541|MGI:3587949 (PMID:16380715)
GO_REF:0000107		 RGD
Ensembl		 PMID:16380715 GO_REF:0000107 NCBI chr 3:177,891,705...177,909,743
Ensembl chr 3:157,474,642...157,490,822 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
MGI:105373|MGI:3053959|MGI:3053960|MGI:95729|MGI:97168|MGI:97169 (PMID:11389830), (PMID:15315763), (PMID:19422820)		 UniProt
Ensembl
RGD		 PMID:11389830 PMID:15315763 PMID:19422820 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:7,687,872...7,697,025
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Shox2 SHOX homeobox 2 acts_upstream_of_or_within ISO
IEA		 MGI:3605739|MGI:3628798 (PMID:16537395), (PMID:17481601)
GO_REF:0000107		 RGD
Ensembl		 PMID:16537395 PMID:17481601 GO_REF:0000107 NCBI chr 2:153,524,324...153,537,571
Ensembl chr 2:151,217,552...151,227,143 		JBrowse link
G Ski Ski proto-oncogene acts_upstream_of_or_within ISO MGI:2177555 (PMID:12435627) RGD PMID:12435627 NCBI chr 5:170,995,851...171,064,957
Ensembl chr 5:165,714,093...165,782,733 		JBrowse link
G Sp8 Sp8 transcription factor acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:2684137 (PMID:14597661)
GO_REF:0000107
(PMID:15358670)		 RGD
Ensembl		 PMID:14597661 PMID:15358670 GO_REF:0000107 NCBI chr 6:145,959,219...145,961,824
Ensembl chr 6:139,814,819...139,823,168
Ensembl chr 6:139,814,819...139,823,168 		JBrowse link
G Sp9 Sp9 transcription factor involved_in ISO
IEA		 (PMID:15358670)
GO_REF:0000107		 RGD
Ensembl		 PMID:15358670 GO_REF:0000107 NCBI chr 3:58,146,826...58,149,357
Ensembl chr 3:58,146,826...58,149,357 		JBrowse link
G Tbx4 T-box transcription factor 4 acts_upstream_of_or_within ISO MGI:2663716 (PMID:12736212) RGD PMID:12736212 NCBI chr10:71,228,145...71,258,222
Ensembl chr10:70,731,163...70,760,825 		JBrowse link
G Tbx5 T-box transcription factor 5 involved_in
acts_upstream_of_or_within		 ISO
IEA
ISS		 (PMID:8988164)
GO_REF:0000107
MGI:2139360 (PMID:12736217), (PMID:16380715)
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:8988164 PMID:12736217 PMID:16380715 GO_REF:0000024 GO_REF:0000107 NCBI chr12:42,342,926...42,399,723
Ensembl chr12:36,688,014...36,734,885 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in ISO
IEA		 (PMID:9217007)
GO_REF:0000107		 RGD
Ensembl		 PMID:9217007 GO_REF:0000107 NCBI chr13:100,691,540...100,793,227
Ensembl chr13:98,160,087...98,261,405 		JBrowse link
G Tp63 tumor protein p63 acts_upstream_of_or_within ISO
IEA		 MGI:101926|MGI:101927|MGI:1934580 (PMID:10227293), (PMID:18326838)
GO_REF:0000107		 RGD
Ensembl		 PMID:10227293 PMID:18326838 GO_REF:0000107 NCBI chr11:88,343,647...88,554,543
Ensembl chr11:74,838,859...75,049,398 		JBrowse link
G Twist1 twist family bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:1857265|MGI:2157489|MGI:3038818 (PMID:11350121), (PMID:12142027), (PMID:15030764) RGD PMID:11350121 PMID:12142027 PMID:15030764 NCBI chr 6:56,402,309...56,404,303
Ensembl chr 6:50,674,678...50,677,653 		JBrowse link
G Wdr19 WD repeat domain 19 acts_upstream_of_or_within ISO
IEA		 MGI:5315747|MGI:5315748 (PMID:22228095)
GO_REF:0000107		 RGD
Ensembl		 PMID:22228095 GO_REF:0000107 NCBI chr14:43,396,130...43,460,012
Ensembl chr14:43,042,478...43,106,288 		JBrowse link
G Wnt5a Wnt family member 5A acts_upstream_of_or_within ISO
IEA		 MGI:1857617 (PMID:10021340)
GO_REF:0000107		 RGD
Ensembl		 PMID:10021340 GO_REF:0000107 NCBI chr16:3,702,300...3,724,860
Ensembl chr16:3,697,032...3,718,234 		JBrowse link
G Wnt7a Wnt family member 7A acts_upstream_of_or_within ISO
IEA		 MGI:1329040|MGI:95389 (PMID:15242796)
GO_REF:0000107		 RGD
Ensembl		 PMID:15242796 GO_REF:0000107 NCBI chr 4:125,420,276...125,466,149
Ensembl chr 4:123,863,108...123,908,981 		JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 acts_upstream_of_or_within ISO MGI:1856943 RGD MGI:61278 NCBI chr 8:57,885,886...58,073,507
Ensembl chr 8:48,994,566...49,177,011 		JBrowse link
embryonic nail plate morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fzd6 frizzled class receptor 6 acts_upstream_of_or_within ISO
IEA		 MGI:3050103 (PMID:23439395)
GO_REF:0000107		 RGD
Ensembl		 PMID:23439395 GO_REF:0000107 NCBI chr 7:71,939,916...71,971,685
Ensembl chr 7:70,055,068...70,086,776 		JBrowse link
G Msx1 msh homeobox 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:11369996)
MGI:97169 (PMID:21465616)		 RGD PMID:11369996 PMID:21465616 NCBI chr14:77,185,802...77,189,735
Ensembl chr14:72,961,148...72,964,966 		JBrowse link
G Msx2 msh homeobox 2 acts_upstream_of_or_within ISO
IEA		 MGI:97168 (PMID:21465616)
GO_REF:0000107		 RGD
Ensembl		 PMID:21465616 GO_REF:0000107 NCBI chr17:11,102,284...11,107,949
Ensembl chr17:11,097,103...11,102,879 		JBrowse link
G Prickle1 prickle planar cell polarity protein 1 involved_in IEA
ISO		 GO_REF:0000107
MGI:4941929 (PMID:23913870)		 Ensembl
RGD		 PMID:23913870 GO_REF:0000107 NCBI chr 7:126,518,587...126,614,581
Ensembl chr 7:124,639,142...124,658,113 		JBrowse link
embryonic skeletal limb joint morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 involved_in IEA
ISO		 GO_REF:0000107
UniProtKB:Q91ZD1 (PMID:21262216)		 Ensembl
RGD		 PMID:21262216 GO_REF:0000107 NCBI chr 8:129,517,576...129,544,661
Ensembl chr 8:120,639,995...120,667,111 		JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within ISO (PMID:21185280) RGD PMID:21185280 NCBI chr 7:86,265,651...86,544,488
Ensembl chr 7:84,375,784...84,655,357 		JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in ISO
IEA		 UniProtKB:Q91ZD1 (PMID:21262216)
GO_REF:0000107		 RGD
Ensembl		 PMID:21262216 GO_REF:0000107 NCBI chr 6:38,088,688...38,100,010
Ensembl chr 6:32,373,816...32,380,817 		JBrowse link
G Osr2 odd-skipped related transcription factor 2 involved_in ISO
IEA		 UniProtKB:Q9WVG7 (PMID:21262216)
GO_REF:0000107		 RGD
Ensembl		 PMID:21262216 GO_REF:0000107 NCBI chr 7:68,372,500...68,380,195
Ensembl chr 7:66,487,839...66,495,224 		JBrowse link
forelimb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ark2c arkadia C-terminal like ring finger ubiquitin ligase 2C acts_upstream_of_or_within ISO
IEA		 MGI:5516581 (PMID:23610558)
GO_REF:0000107		 RGD
Ensembl		 PMID:23610558 GO_REF:0000107 NCBI chr18:70,984,566...71,100,836
Ensembl chr18:70,989,731...71,100,836 		JBrowse link
G Fmn1 formin 1 acts_upstream_of_or_within ISO MGI:3718051 (PMID:17554679) RGD PMID:17554679 NCBI chr 3:100,101,103...100,485,652
Ensembl chr 3:100,134,549...100,479,220 		JBrowse link
G Gdf5 growth differentiation factor 5 acts_upstream_of_or_within ISO
IEA		 MGI:1855974 (PMID:8145850)
GO_REF:0000107		 RGD
Ensembl		 PMID:8145850 GO_REF:0000107 NCBI chr 3:164,914,401...164,918,593
Ensembl chr 3:144,454,338...144,458,612 		JBrowse link
G Hoxd10 homeo box D10 acts_upstream_of_or_within ISO
IEA		 MGI:96210 (PMID:10642795)
GO_REF:0000107		 RGD
Ensembl		 PMID:10642795 GO_REF:0000107 NCBI chr 3:80,001,947...80,005,156
Ensembl chr 3:59,594,516...59,597,725 		JBrowse link
G Hoxd9 homeo box D9 acts_upstream_of_or_within ISO
IEA		 MGI:96202 (PMID:10642795)
GO_REF:0000107		 RGD
Ensembl		 PMID:10642795 GO_REF:0000107 NCBI chr 3:80,008,006...80,010,186
Ensembl chr 3:59,600,575...59,602,754 		JBrowse link
G Nipbl NIPBL, cohesin loading factor involved_in ISO
IEA		 (PMID:15146186)
GO_REF:0000107		 RGD
Ensembl		 PMID:15146186 GO_REF:0000107 NCBI chr 2:59,126,676...59,314,841
Ensembl chr 2:57,399,445...57,565,899 		JBrowse link
G Sall1 spalt-like transcription factor 1 acts_upstream_of_or_within ISO MGI:109295 (PMID:19168674) RGD PMID:19168674 NCBI chr19:34,179,316...34,196,278
Ensembl chr19:18,007,503...18,022,705 		JBrowse link
G Sall3 spalt-like transcription factor 3 acts_upstream_of_or_within ISO MGI:1889585 (PMID:19168674) RGD PMID:19168674 NCBI chr18:76,680,997...76,700,905
Ensembl chr18:74,407,560...74,426,789 		JBrowse link
G Tbx3 T-box transcription factor 3 acts_upstream_of_or_within ISO
IEA		 (PMID:9207801)
GO_REF:0000107		 RGD
Ensembl		 PMID:9207801 GO_REF:0000107 NCBI chr12:42,540,378...42,555,490
Ensembl chr12:36,881,445...36,893,708 		JBrowse link
G Tbx5 T-box transcription factor 5 acts_upstream_of_or_within ISO
IEA		 (PMID:8988164), (PMID:8988165)
GO_REF:0000107
MGI:2387850 (PMID:15621531)		 RGD
Ensembl		 PMID:8988164 PMID:8988165 PMID:15621531 GO_REF:0000107 NCBI chr12:42,342,926...42,399,723
Ensembl chr12:36,688,014...36,734,885 		JBrowse link
G Tfap2a transcription factor AP-2 alpha acts_upstream_of_or_within ISO MGI:2176682 (PMID:9811866) RGD PMID:9811866 NCBI chr17:24,230,064...24,253,219
Ensembl chr17:24,024,432...24,047,507 		JBrowse link
G Tfap2b transcription factor AP-2 beta involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:21829553)		 UniProt
Ensembl
RGD		 PMID:21829553 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:29,282,703...29,312,568
Ensembl chr 9:21,786,258...21,814,520 		JBrowse link
G Wnt7a Wnt family member 7A acts_upstream_of_or_within ISO MGI:1857009 RGD MGI:48652 NCBI chr 4:125,420,276...125,466,149
Ensembl chr 4:123,863,108...123,908,981 		JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 acts_upstream_of_or_within ISO
IEA		 MGI:2182708 (PMID:10835630)
GO_REF:0000107		 RGD
Ensembl		 PMID:10835630 GO_REF:0000107 NCBI chr 8:57,885,886...58,073,507
Ensembl chr 8:48,994,566...49,177,011 		JBrowse link
hindlimb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp7a ATPase copper transporting alpha acts_upstream_of_or_within ISO MGI:1856099 RGD MGI:61157 NCBI chr  X:75,159,635...75,267,094
Ensembl chr  X:71,094,202...71,198,354 		JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A acts_upstream_of_or_within ISO
IEA		 MGI:2158390|MGI:2176182 (PMID:16556916)
GO_REF:0000107		 RGD
Ensembl		 PMID:16556916 GO_REF:0000107 NCBI chr16:9,740,751...9,786,861
Ensembl chr16:9,736,630...9,780,616 		JBrowse link
G Fmn1 formin 1 acts_upstream_of_or_within ISO MGI:3718051 (PMID:17554679) RGD PMID:17554679 NCBI chr 3:100,101,103...100,485,652
Ensembl chr 3:100,134,549...100,479,220 		JBrowse link
G Gdf5 growth differentiation factor 5 acts_upstream_of_or_within ISO
IEA		 MGI:1855974|MGI:1856810 (PMID:17085896), (PMID:8145850)
GO_REF:0000107		 RGD
Ensembl		 PMID:8145850 PMID:17085896 GO_REF:0000107 NCBI chr 3:164,914,401...164,918,593
Ensembl chr 3:144,454,338...144,458,612 		JBrowse link
G Hoxd10 homeo box D10 acts_upstream_of_or_within ISO
IEA		 MGI:96210 (PMID:10642795)
GO_REF:0000107		 RGD
Ensembl		 PMID:10642795 GO_REF:0000107 NCBI chr 3:80,001,947...80,005,156
Ensembl chr 3:59,594,516...59,597,725 		JBrowse link
G Hoxd9 homeo box D9 acts_upstream_of_or_within ISO
IEA		 MGI:96202 (PMID:10642795)
GO_REF:0000107		 RGD
Ensembl		 PMID:10642795 GO_REF:0000107 NCBI chr 3:80,008,006...80,010,186
Ensembl chr 3:59,600,575...59,602,754 		JBrowse link
G Pitx1 paired-like homeodomain 1 acts_upstream_of_or_within ISO
IEA		 MGI:1857659|MGI:1934200 (PMID:10049363), (PMID:10101115), (PMID:15621531), (PMID:16989801)
GO_REF:0000107		 RGD
Ensembl		 PMID:10049363 PMID:10101115 PMID:15621531 PMID:16989801 GO_REF:0000107 NCBI chr17:8,794,051...8,805,477
Ensembl chr17:8,794,134...8,800,291 		JBrowse link
G Ptch1 patched 1 acts_upstream_of_or_within ISO
IEA		 MGI:1857447 (PMID:9262482)
GO_REF:0000107		 RGD
Ensembl		 PMID:9262482 GO_REF:0000107 NCBI chr17:1,548,449...1,613,461
Ensembl chr17:1,542,877...1,607,333 		JBrowse link
G Sall1 spalt-like transcription factor 1 acts_upstream_of_or_within ISO MGI:109295 (PMID:19168674) RGD PMID:19168674 NCBI chr19:34,179,316...34,196,278
Ensembl chr19:18,007,503...18,022,705 		JBrowse link
G Sall3 spalt-like transcription factor 3 acts_upstream_of_or_within ISO MGI:1889585 (PMID:19168674) RGD PMID:19168674 NCBI chr18:76,680,997...76,700,905
Ensembl chr18:74,407,560...74,426,789 		JBrowse link
G Tfap2b transcription factor AP-2 beta involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:21829553)		 UniProt
Ensembl
RGD		 PMID:21829553 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:29,282,703...29,312,568
Ensembl chr 9:21,786,258...21,814,520 		JBrowse link
G Twist1 twist family bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:2157489 (PMID:10700192) RGD PMID:10700192 NCBI chr 6:56,402,309...56,404,303
Ensembl chr 6:50,674,678...50,677,653 		JBrowse link
G Wnt7a Wnt family member 7A acts_upstream_of_or_within ISO MGI:1857009 RGD MGI:48652 NCBI chr 4:125,420,276...125,466,149
Ensembl chr 4:123,863,108...123,908,981 		JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 acts_upstream_of_or_within ISO
IEA		 MGI:2182708 (PMID:10835630)
GO_REF:0000107		 RGD
Ensembl		 PMID:10835630 GO_REF:0000107 NCBI chr 8:57,885,886...58,073,507
Ensembl chr 8:48,994,566...49,177,011 		JBrowse link
limb bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col2a1 collagen type II alpha 1 chain involved_in IEA
ISO		 GO_REF:0000107
(PMID:20940257)		 Ensembl
RGD		 PMID:20940257 GO_REF:0000107 NCBI chr 7:130,977,561...131,006,627
Ensembl chr 7:129,098,786...129,127,546 		JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within ISO (PMID:20404326) RGD PMID:20404326 NCBI chr 7:86,265,651...86,544,488
Ensembl chr 7:84,375,784...84,655,357 		JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within ISO
IEA		 MGI:1927833 (PMID:9784490)
GO_REF:0000107		 RGD
Ensembl		 PMID:9784490 GO_REF:0000107 NCBI chr 2:52,533,939...52,610,980
Ensembl chr 2:50,800,992...50,876,866 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO MGI:2153790|MGI:2153799 (PMID:10518547), (PMID:9435295) RGD PMID:9435295 PMID:10518547 NCBI chr 1:194,175,703...194,280,914
Ensembl chr 1:184,745,420...184,850,626 		JBrowse link
G Plxna2 plexin A2 involved_in ISO
IEA		 (PMID:19666519)
GO_REF:0000107		 RGD
Ensembl		 PMID:19666519 GO_REF:0000107 NCBI chr13:108,683,155...108,888,336
Ensembl chr13:106,163,103...106,358,979 		JBrowse link
G Sema3c semaphorin 3C involved_in ISO
IEA		 (PMID:19666519)
GO_REF:0000107		 RGD
Ensembl		 PMID:19666519 GO_REF:0000107 NCBI chr 4:18,538,452...18,702,453
Ensembl chr 4:17,583,212...17,746,534 		JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO
IEA		 MGI:1857796 (PMID:11118883)
GO_REF:0000107		 RGD
Ensembl		 PMID:11118883 GO_REF:0000107 NCBI chr 4:7,687,872...7,697,025
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in ISO
IEA		 (PMID:20940257)
GO_REF:0000107		 RGD
Ensembl		 PMID:20940257 GO_REF:0000107 NCBI chr10:98,305,744...98,311,250
Ensembl chr10:97,806,485...97,811,994 		JBrowse link
G Wnt3 Wnt family member 3 involved_in ISO (PMID:14872406) RGD PMID:14872406 NCBI chr10:89,180,224...89,224,195
Ensembl chr10:88,680,248...88,724,099 		JBrowse link
G Zfp219 zinc finger protein 219 involved_in ISO
IEA		 (PMID:20940257)
GO_REF:0000107		 RGD
Ensembl		 PMID:20940257 GO_REF:0000107 NCBI chr15:27,169,335...27,183,555
Ensembl chr15:24,695,837...24,710,030 		JBrowse link
limb joint morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col3a1 collagen type III alpha 1 chain involved_in ISO MGI:1857431 (PMID:31655293) RGD PMID:31655293 NCBI chr 9:54,866,646...54,902,578
Ensembl chr 9:47,374,593...47,410,547 		JBrowse link
G Col6a1 collagen type VI alpha 1 chain acts_upstream_of_or_within ISO
IEA		 MGI:2153356 (PMID:22448243)
GO_REF:0000107		 RGD
Ensembl		 PMID:22448243 GO_REF:0000107 NCBI chr20:11,905,690...11,924,111
Ensembl chr20:11,905,957...11,924,597 		JBrowse link
G Errfi1 ERBB receptor feedback inhibitor 1 acts_upstream_of_or_within ISO
IEA		 MGI:5575860 (PMID:24550287)
GO_REF:0000107		 RGD
Ensembl		 PMID:24550287 GO_REF:0000107 NCBI chr 5:166,606,841...166,620,124
Ensembl chr 5:161,323,998...161,337,282 		JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within ISO
IEA		 (PMID:20404326)
GO_REF:0000107		 RGD
Ensembl		 PMID:20404326 GO_REF:0000107 NCBI chr 7:86,265,651...86,544,488
Ensembl chr 7:84,375,784...84,655,357 		JBrowse link
G Sulf1 sulfatase 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 5:11,145,950...11,308,622
Ensembl chr 5:6,362,911...6,525,584 		JBrowse link
post-embryonic forelimb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atrx ATRX, chromatin remodeler acts_upstream_of_or_within ISO
IEA		 (PMID:24386478)
GO_REF:0000107		 RGD
Ensembl		 PMID:24386478 GO_REF:0000107 NCBI chr  X:74,916,548...75,062,880
Ensembl chr  X:70,850,981...70,997,330 		JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO MGI:6402836 (PMID:24770645) RGD PMID:24770645 NCBI chr 1:22,518,051...22,583,044
Ensembl chr 1:20,698,764...20,763,715 		JBrowse link
G Vps54 VPS54 subunit of GARP complex involved_in IEA
ISO		 GO_REF:0000107
MGI:1857091 (PMID:11403940)		 Ensembl
RGD		 PMID:11403940 GO_REF:0000107 NCBI chr14:99,580,120...99,657,178
Ensembl chr14:95,378,012...95,455,857 		JBrowse link
post-embryonic hindlimb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Large1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within ISO
IEA		 (PMID:24722207)
GO_REF:0000107		 RGD
Ensembl		 PMID:24722207 GO_REF:0000107 NCBI chr19:11,609,004...12,057,174
Ensembl chr19:11,603,129...12,048,930 		JBrowse link
G Mir23a microRNA 23a acts_upstream_of_or_within ISO (PMID:24101522) RGD PMID:24101522 NCBI chr19:40,859,769...40,859,843
Ensembl chr19:23,954,997...23,955,071 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20567
    developmental process 7160
      anatomical structure morphogenesis 3018
        appendage morphogenesis 183
          limb morphogenesis 183
            embryonic limb morphogenesis + 148
            forelimb morphogenesis + 47
            hindlimb morphogenesis + 47
            limb bud formation + 10
            limb joint morphogenesis + 8
            post-embryonic limb morphogenesis + 5
Path 2
Term Annotations click to browse term
  biological_process 20567
    developmental process 7160
      anatomical structure development 6656
        multicellular organism development 5362
          appendage development 222
            appendage morphogenesis 183
              limb morphogenesis 183
                embryonic limb morphogenesis + 148
                forelimb morphogenesis + 47
                hindlimb morphogenesis + 47
                limb bud formation + 10
                limb joint morphogenesis + 8
                post-embryonic limb morphogenesis + 5
paths to the root