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ONTOLOGY REPORT - ANNOTATIONS

Term:limb morphogenesis
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Accession:GO:0035108 term browser browse the term
Definition:The process in which the anatomical structures of a limb are generated and organized. A limb is a paired appendage of a tetrapod used for locomotion or grasping.
Synonyms:narrow_synonym: limb bud morphogenesis


show annotations for term's descendants           Sort by:
limb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alx4 aristaless-like homeobox 4 acts_upstream_of_or_within IGI
IMP		 (PMID:9847249)
(PMID:9374397), (PMID:9847249)		 MGI PMID:9374397 PMID:9847249 NCBI chr 2:93,472,779...93,511,686
Ensembl chr 2:93,472,729...93,511,684 		JBrowse link
G Asph aspartate-beta-hydroxylase acts_upstream_of_or_within IMP (PMID:11773073) MGI PMID:11773073 NCBI chr 4:9,449,085...9,669,344
Ensembl chr 4:9,448,069...9,669,344 		JBrowse link
G Bak1 BCL2-antagonist/killer 1 acts_upstream_of_or_within IGI (PMID:11163212) MGI PMID:11163212 NCBI chr17:27,238,786...27,247,601
Ensembl chr17:27,238,784...27,247,983 		JBrowse link
G Bax BCL2-associated X protein acts_upstream_of_or_within IGI (PMID:11163212) MGI PMID:11163212 NCBI chr 7:45,111,124...45,116,332
Ensembl chr 7:45,111,121...45,116,322 		JBrowse link
G Cibar1 CBY1 interacting BAR domain containing 1 involved_in IMP
ISO		 (PMID:30395363) UniProt
GO_Central		 PMID:30395363 GO_REF:0000119 NCBI chr 4:12,153,142...12,172,047
Ensembl chr 4:12,153,409...12,172,015 		JBrowse link
G Col2a1 collagen, type II, alpha 1 acts_upstream_of_or_within IMP (PMID:10100048) MGI PMID:10100048 NCBI chr15:97,873,483...97,902,525
Ensembl chr15:97,873,483...97,902,576 		JBrowse link
G Evx2 even-skipped homeobox 2 acts_upstream_of_or_within IGI
IMP		 (PMID:8978698) MGI PMID:8978698 NCBI chr 2:74,483,333...74,491,864
Ensembl chr 2:74,483,335...74,489,901 		JBrowse link
G Fbn2 fibrillin 2 acts_upstream_of_or_within IMP (PMID:10700192) MGI PMID:10700192 NCBI chr18:58,141,689...58,343,200
Ensembl chr18:58,141,695...58,343,559 		JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within IMP (PMID:9916808) MGI PMID:9916808 NCBI chr13:118,851,199...118,928,651
Ensembl chr13:118,806,327...118,928,651 		JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within IGI (PMID:15328019) MGI PMID:15328019 NCBI chr19:45,724,930...45,731,380
Ensembl chr19:45,725,237...45,731,354 		JBrowse link
G Flvcr1 feline leukemia virus subgroup C cellular receptor 1 acts_upstream_of_or_within IMP (PMID:18258918) MGI PMID:18258918 NCBI chr 1:190,738,029...190,758,387
Ensembl chr 1:190,738,044...190,758,355 		JBrowse link
G Gli3 GLI-Kruppel family member GLI3 acts_upstream_of_or_within
involved_in		 IMP
ISO		 (PMID:9268572) MGI
GO_Central		 PMID:9268572 GO_REF:0000119 NCBI chr13:15,638,308...15,904,611
Ensembl chr13:15,637,820...15,904,611 		JBrowse link
G Hoxd13 homeobox D13 acts_upstream_of_or_within IMP
IGI		 (PMID:11543619)
(PMID:8978698)		 MGI PMID:8978698 PMID:11543619 NCBI chr 2:74,498,569...74,501,947
Ensembl chr 2:74,498,654...74,501,943 		JBrowse link
G Idua iduronidase, alpha-L acts_upstream_of_or_within IMP (PMID:9097952) MGI PMID:9097952 NCBI chr 5:108,808,197...108,833,312
Ensembl chr 5:108,808,197...108,832,423 		JBrowse link
G Ift140 intraflagellar transport 140 acts_upstream_of_or_within IMP (PMID:24009529) MGI PMID:24009529 NCBI chr17:25,235,056...25,318,461
Ensembl chr17:25,235,059...25,318,469 		JBrowse link
G Iqce IQ motif containing E involved_in ISO
ISS		 GO_Central
UniProt		 GO_REF:0000024 GO_REF:0000119 NCBI chr 5:140,648,308...140,688,158
Ensembl chr 5:140,647,582...140,688,133 		JBrowse link
G Lmx1b LIM homeobox transcription factor 1 beta acts_upstream_of_or_within IMP (PMID:20589901) MGI PMID:20589901 NCBI chr 2:33,450,977...33,531,219
Ensembl chr 2:33,450,977...33,530,620 		JBrowse link
G Lrp5 low density lipoprotein receptor-related protein 5 acts_upstream_of_or_within IGI (PMID:15537447) MGI PMID:15537447 NCBI chr19:3,634,825...3,736,574
Ensembl chr19:3,634,828...3,736,564 		JBrowse link
G Lrp6 low density lipoprotein receptor-related protein 6 acts_upstream_of_or_within IGI
IMP		 (PMID:15537447)
(PMID:15469977)		 MGI PMID:15469977 PMID:15537447 NCBI chr 6:134,423,439...134,543,876
Ensembl chr 6:134,423,439...134,543,928 		JBrowse link
G Megf8 multiple EGF-like-domains 8 involved_in ISO GO_Central GO_REF:0000119 NCBI chr 7:25,016,589...25,065,342
Ensembl chr 7:25,016,589...25,065,342 		JBrowse link
G Nfia nuclear factor I/A involved_in IMP (PMID:29247144) MGI PMID:29247144 NCBI chr 4:97,469,534...98,007,113
Ensembl chr 4:97,660,971...98,007,111 		JBrowse link
G Npr2 natriuretic peptide receptor 2 involved_in IMP (PMID:17728275) MGI PMID:17728275 NCBI chr 4:43,629,015...43,651,437
Ensembl chr 4:43,631,935...43,651,244 		JBrowse link
G Pcnt pericentrin (kendrin) acts_upstream_of_or_within IMP (PMID:20096683) MGI PMID:20096683 NCBI chr10:76,187,098...76,279,988
Ensembl chr10:76,187,097...76,278,620 		JBrowse link
G Pcsk5 proprotein convertase subtilisin/kexin type 5 involved_in IMP (PMID:18519639) BHF-UCL PMID:18519639 NCBI chr19:17,409,678...17,815,076
Ensembl chr19:17,409,683...17,814,996 		JBrowse link
G Pkdcc protein kinase domain containing, cytoplasmic acts_upstream_of_or_within IMP (PMID:21553379) MGI PMID:21553379 NCBI chr17:83,522,708...83,532,496
Ensembl chr17:83,522,721...83,532,499 		JBrowse link
G Prickle1 prickle planar cell polarity protein 1 involved_in IMP (PMID:25190059) MGI PMID:25190059 NCBI chr15:93,396,992...93,494,147
Ensembl chr15:93,396,995...93,493,772 		JBrowse link
G Ptch1 patched 1 involved_in ISO GO_Central GO_REF:0000119 NCBI chr13:63,656,142...63,721,274
Ensembl chr13:63,656,142...63,721,412 		JBrowse link
G Rpgrip1l Rpgrip1-like acts_upstream_of_or_within IMP (PMID:17558409) MGI PMID:17558409 NCBI chr 8:91,943,658...92,039,919
Ensembl chr 8:91,943,658...92,039,890 		JBrowse link
G Sik3 SIK family kinase 3 acts_upstream_of_or_within IMP (PMID:22318228) MGI PMID:22318228 NCBI chr 9:45,924,099...46,135,492
Ensembl chr 9:45,924,118...46,135,492 		JBrowse link
G Tbx3 T-box 3 acts_upstream_of_or_within
involved_in		 IMP (PMID:12668638)
(PMID:27046536)		 MGI PMID:12668638 PMID:27046536 NCBI chr 5:119,808,600...119,822,789
Ensembl chr 5:119,808,734...119,822,789 		JBrowse link
G Tbx4 T-box 4 acts_upstream_of_or_within
involved_in		 IDA
ISO
ISS		 (PMID:15621531)
(PMID:10945475)		 MGI
GO_Central
UniProt		 PMID:10945475 PMID:15621531 GO_REF:0000119 NCBI chr11:85,777,193...85,806,923
Ensembl chr11:85,777,248...85,806,923 		JBrowse link
G Vps54 VPS54 GARP complex subunit involved_in IMP (PMID:24141020) MGI PMID:24141020 NCBI chr11:21,189,032...21,271,133
Ensembl chr11:21,189,281...21,271,136 		JBrowse link
G Wnt5a wingless-type MMTV integration site family, member 5A acts_upstream_of_or_within IMP (PMID:19795512) MGI PMID:19795512 NCBI chr14:28,224,962...28,249,405
Ensembl chr14:28,226,707...28,249,405 		JBrowse link
G Zic3 zinc finger protein of the cerebellum 3 involved_in IGI (PMID:22234993) MGI PMID:22234993 NCBI chr  X:57,075,988...57,081,990
Ensembl chr  X:57,068,060...57,087,096 		JBrowse link
apoptotic process involved in embryonic digit morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bax BCL2-associated X protein acts_upstream_of_or_within IGI (PMID:15967824) MGI PMID:15967824 NCBI chr 7:45,111,124...45,116,332
Ensembl chr 7:45,111,121...45,116,322 		JBrowse link
G Bcl2l11 BCL2 like 11 acts_upstream_of_or_within IGI (PMID:15967824) MGI PMID:15967824 NCBI chr 2:127,967,958...128,004,467
Ensembl chr 2:127,967,958...128,004,467 		JBrowse link
G Notch1 notch 1 acts_upstream_of_or_within IMP (PMID:16245338) MGI PMID:16245338 NCBI chr 2:26,347,914...26,393,834
Ensembl chr 2:26,347,915...26,406,675 		JBrowse link
embryonic digit morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alx4 aristaless-like homeobox 4 acts_upstream_of_or_within IGI
IMP		 (PMID:9272948)
(PMID:9268572)		 MGI PMID:9268572 PMID:9272948 NCBI chr 2:93,472,779...93,511,686
Ensembl chr 2:93,472,729...93,511,684 		JBrowse link
G B9d1 B9 protein domain 1 acts_upstream_of_or_within IMP (PMID:22179047) MGI PMID:22179047 NCBI chr11:61,395,970...61,403,757
Ensembl chr11:61,395,970...61,403,757 		JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within IGI (PMID:9268572) MGI PMID:9268572 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126 		JBrowse link
G Bmpr1a bone morphogenetic protein receptor, type 1A acts_upstream_of_or_within IGI (PMID:20043884) MGI PMID:20043884 NCBI chr14:34,133,018...34,225,335
Ensembl chr14:34,132,691...34,225,298 		JBrowse link
G Bpnt2 3'(2'), 5'-bisphosphate nucleotidase 2 acts_upstream_of_or_within IMP (PMID:18539921) MGI PMID:18539921 NCBI chr 4:4,762,484...4,793,306
Ensembl chr 4:4,762,484...4,793,355 		JBrowse link
G C2cd3 C2 calcium-dependent domain containing 3 acts_upstream_of_or_within IMP (PMID:19004860) MGI PMID:19004860 NCBI chr 7:100,021,440...100,119,366
Ensembl chr 7:100,021,440...100,119,359 		JBrowse link
G Chst11 carbohydrate sulfotransferase 11 acts_upstream_of_or_within IMP (PMID:16079159) MGI PMID:16079159 NCBI chr10:82,820,274...83,031,738
Ensembl chr10:82,821,332...83,031,734 		JBrowse link
G Cplane1 ciliogenesis and planar polarity effector 1 acts_upstream_of_or_within IMP (PMID:25877302) MGI PMID:25877302 NCBI chr15:8,198,509...8,300,642
Ensembl chr15:8,198,590...8,300,642 		JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within IGI
IMP		 (PMID:20043884)
(PMID:12923052)		 MGI PMID:12923052 PMID:20043884 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573 		JBrowse link
G Ece1 endothelin converting enzyme 1 involved_in IEA
ISO		 Ensembl
GO_Central		 GO_REF:0000107 GO_REF:0000119 NCBI chr 4:137,589,548...137,692,540
Ensembl chr 4:137,589,548...137,692,540 		JBrowse link
G Fbxw4 F-box and WD-40 domain protein 4 acts_upstream_of_or_within IMP (PMID:9733575)
(PMID:10471509)		 MGI PMID:9733575 PMID:10471509 NCBI chr19:45,566,693...45,648,954
Ensembl chr19:45,566,693...45,648,751 		JBrowse link
G Flvcr1 feline leukemia virus subgroup C cellular receptor 1 acts_upstream_of_or_within IMP (PMID:18258918) MGI PMID:18258918 NCBI chr 1:190,738,029...190,758,387
Ensembl chr 1:190,738,044...190,758,355 		JBrowse link
G Frem2 Fras1 related extracellular matrix protein 2 acts_upstream_of_or_within IMP (PMID:26234751) MGI PMID:26234751 NCBI chr 3:53,421,359...53,566,014
Ensembl chr 3:53,421,359...53,564,776 		JBrowse link
G Fuz fuzzy planar cell polarity protein acts_upstream_of_or_within IMP (PMID:19877275)
(PMID:27158779)		 MGI PMID:19877275 PMID:27158779 NCBI chr 7:44,545,517...44,552,053
Ensembl chr 7:44,545,503...44,552,055 		JBrowse link
G Gas1 growth arrest specific 1 acts_upstream_of_or_within IMP
IGI		 (PMID:17504940), (PMID:17504941) MGI PMID:17504940 PMID:17504941 NCBI chr13:60,322,219...60,325,179
Ensembl chr13:60,322,219...60,325,179 		JBrowse link
G Gja1 gap junction protein, alpha 1 acts_upstream_of_or_within IMP (PMID:19439426) MGI PMID:19439426 NCBI chr10:56,253,297...56,266,519
Ensembl chr10:56,253,426...56,278,609 		JBrowse link
G Gli2 GLI-Kruppel family member GLI2 acts_upstream_of_or_within IMP (PMID:19056373) MGI PMID:19056373 NCBI chr 1:118,761,791...118,987,578
Ensembl chr 1:118,761,862...118,981,349 		JBrowse link
G Gli3 GLI-Kruppel family member GLI3 acts_upstream_of_or_within IMP
IGI		 (PMID:16254602), (PMID:19036983), (PMID:9268572)
(PMID:17714700)
(PMID:22841643)
(PMID:9268572)		 MGI PMID:9268572 PMID:16254602 PMID:17714700 PMID:19036983 PMID:22841643 NCBI chr13:15,638,308...15,904,611
Ensembl chr13:15,637,820...15,904,611 		JBrowse link
G Gna12 guanine nucleotide binding protein, alpha 12 acts_upstream_of_or_within IGI (PMID:12077299) MGI PMID:12077299 NCBI chr 5:140,745,699...140,816,186
Ensembl chr 5:140,744,163...140,816,186 		JBrowse link
G Gnaq guanine nucleotide binding protein, alpha q polypeptide acts_upstream_of_or_within IGI (PMID:12077299) MGI PMID:12077299 NCBI chr19:16,110,048...16,365,884
Ensembl chr19:16,110,195...16,364,827 		JBrowse link
G Grhl2 grainyhead like transcription factor 2 acts_upstream_of_or_within IMP (PMID:21377456) MGI PMID:21377456 NCBI chr15:37,233,065...37,363,813
Ensembl chr15:37,233,280...37,363,813 		JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 acts_upstream_of_or_within IDA (PMID:12070084) MGI PMID:12070084 NCBI chr 8:57,774,018...57,777,552
Ensembl chr 8:57,774,018...57,777,668 		JBrowse link
G Hdac1 histone deacetylase 1 involved_in IGI (PMID:21093383) BHF-UCL PMID:21093383 NCBI chr 4:129,409,897...129,436,516
Ensembl chr 4:129,409,897...129,436,506 		JBrowse link
G Hdac2 histone deacetylase 2 involved_in IGI (PMID:21093383) BHF-UCL PMID:21093383 NCBI chr10:36,850,293...36,877,885
Ensembl chr10:36,850,540...36,877,885 		JBrowse link
G Hoxa11 homeobox A11 acts_upstream_of_or_within IGI (PMID:12869760) MGI PMID:12869760 NCBI chr 6:52,219,086...52,222,784
Ensembl chr 6:52,219,086...52,222,790 		JBrowse link
G Hoxc11 homeobox C11 acts_upstream_of_or_within IGI (PMID:12869760) MGI PMID:12869760 NCBI chr15:102,862,961...102,865,136
Ensembl chr15:102,862,862...102,866,143 		JBrowse link
G Hoxd11 homeobox D11 acts_upstream_of_or_within IGI (PMID:12869760)
(PMID:17714700)
(PMID:8900279)		 MGI PMID:8900279 PMID:12869760 PMID:17714700 NCBI chr 2:74,509,902...74,517,360
Ensembl chr 2:74,509,901...74,517,360 		JBrowse link
G Hoxd12 homeobox D12 acts_upstream_of_or_within IGI (PMID:8900279)
(PMID:17714700)		 MGI PMID:8900279 PMID:17714700 NCBI chr 2:74,505,357...74,508,049
Ensembl chr 2:74,505,357...74,508,049 		JBrowse link
G Hoxd13 homeobox D13 acts_upstream_of_or_within IGI (PMID:17714700)
(PMID:9342042)
(PMID:8900279)		 MGI PMID:8900279 PMID:9342042 PMID:17714700 NCBI chr 2:74,498,569...74,501,947
Ensembl chr 2:74,498,654...74,501,943 		JBrowse link
G Ift122 intraflagellar transport 122 acts_upstream_of_or_within IMP (PMID:15755804) MGI PMID:15755804 NCBI chr 6:115,830,340...115,903,660
Ensembl chr 6:115,830,431...115,903,660 		JBrowse link
G Ift140 intraflagellar transport 140 acts_upstream_of_or_within IMP (PMID:23469164) MGI PMID:23469164 NCBI chr17:25,235,056...25,318,461
Ensembl chr17:25,235,059...25,318,469 		JBrowse link
G Ift52 intraflagellar transport 52 acts_upstream_of_or_within IMP (PMID:15930098) MGI PMID:15930098 NCBI chr 2:162,859,200...162,888,075
Ensembl chr 2:162,859,274...162,888,061 		JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within IMP
IGI		 (PMID:15755804), (PMID:15930098)
(PMID:19036983)
(PMID:12701101), (PMID:16254602)
(PMID:15930098)		 MGI PMID:12701101 PMID:15755804 PMID:15930098 PMID:16254602 PMID:19036983 NCBI chr14:57,661,519...57,755,393
Ensembl chr14:57,661,519...57,755,393 		JBrowse link
G Ihh Indian hedgehog acts_upstream_of_or_within
involved_in		 IMP
ISO
IGI		 (PMID:20660756) MGI
GO_Central		 PMID:20660756 GO_REF:0000119 NCBI chr 1:74,984,474...74,990,831
Ensembl chr 1:74,984,474...74,990,831 		JBrowse link
G Intu inturned planar cell polarity protein acts_upstream_of_or_within
involved_in		 IMP
ISO		 (PMID:25774014)
(PMID:27158779)		 MGI
GO_Central		 PMID:25774014 PMID:27158779 NCBI chr 3:40,585,559...40,659,206
Ensembl chr 3:40,585,435...40,659,204 		JBrowse link
G Lmbr1 limb region 1 acts_upstream_of_or_within IMP (PMID:11606546) MGI PMID:11606546 NCBI chr 5:29,434,800...29,583,414
Ensembl chr 5:29,481,000...29,485,295
Ensembl chr 5:29,481,000...29,485,295 		JBrowse link
G Lnpk lunapark, ER junction formation factor acts_upstream_of_or_within IGI (PMID:9342042) MGI PMID:9342042 NCBI chr 2:74,345,180...74,409,802
Ensembl chr 2:74,350,635...74,409,779 		JBrowse link
G Lrp4 low density lipoprotein receptor-related protein 4 acts_upstream_of_or_within IMP (PMID:16517118) MGI PMID:16517118 NCBI chr 2:91,287,794...91,344,246
Ensembl chr 2:91,287,856...91,344,124 		JBrowse link
G Lrp5 low density lipoprotein receptor-related protein 5 acts_upstream_of_or_within IGI (PMID:15142971) MGI PMID:15142971 NCBI chr19:3,634,825...3,736,574
Ensembl chr19:3,634,828...3,736,564 		JBrowse link
G Lrp6 low density lipoprotein receptor-related protein 6 acts_upstream_of_or_within IGI
IMP		 (PMID:15142971)
(PMID:19795512)		 MGI PMID:15142971 PMID:19795512 NCBI chr 6:134,423,439...134,543,876
Ensembl chr 6:134,423,439...134,543,928 		JBrowse link
G Map3k20 mitogen-activated protein kinase kinase kinase 20 involved_in ISO
IMP		 (PMID:26755636) GO_Central
UniProt		 PMID:26755636 GO_REF:0000119 NCBI chr 2:72,115,970...72,272,954
Ensembl chr 2:72,115,981...72,272,954 		JBrowse link
G Megf8 multiple EGF-like-domains 8 acts_upstream_of_or_within IMP (PMID:32203821) MGI PMID:32203821 NCBI chr 7:25,016,589...25,065,342
Ensembl chr 7:25,016,589...25,065,342 		JBrowse link
G Mks1 MKS transition zone complex subunit 1 acts_upstream_of_or_within IMP (PMID:21045211)
(PMID:23454480)
(PMID:19776033)		 MGI PMID:19776033 PMID:21045211 PMID:23454480 NCBI chr11:87,744,007...87,754,629
Ensembl chr11:87,744,041...87,754,629 		JBrowse link
G Msx1 msh homeobox 1 acts_upstream_of_or_within IGI (PMID:21465616) MGI PMID:21465616 NCBI chr 5:37,977,835...37,981,929
Ensembl chr 5:37,977,829...37,981,927 		JBrowse link
G Msx2 msh homeobox 2 acts_upstream_of_or_within IGI (PMID:21465616) MGI PMID:21465616 NCBI chr13:53,620,917...53,626,816
Ensembl chr13:53,620,920...53,627,110 		JBrowse link
G Mycn v-myc avian myelocytomatosis viral related oncogene, neuroblastoma derived acts_upstream_of_or_within IMP (PMID:17360777) MGI PMID:17360777 NCBI chr12:12,986,094...12,991,837
Ensembl chr12:12,986,094...12,991,915 		JBrowse link
G Nog noggin involved_in IEA
ISO		 Ensembl
GO_Central		 GO_REF:0000107 GO_REF:0000119 NCBI chr11:89,191,464...89,193,385
Ensembl chr11:89,191,464...89,193,158 		JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in IGI (PMID:21262216) BHF-UCL PMID:21262216 NCBI chr12:9,624,442...9,631,500
Ensembl chr12:9,620,116...9,631,500 		JBrowse link
G Osr2 odd-skipped related 2 involved_in IGI (PMID:21262216) BHF-UCL PMID:21262216 NCBI chr15:35,296,244...35,303,451
Ensembl chr15:35,296,244...35,303,451 		JBrowse link
G Prickle1 prickle planar cell polarity protein 1 involved_in IMP (PMID:23913870) MGI PMID:23913870 NCBI chr15:93,396,992...93,494,147
Ensembl chr15:93,396,995...93,493,772 		JBrowse link
G Rab23 RAB23, member RAS oncogene family acts_upstream_of_or_within IMP (PMID:15755804), (PMID:9636176) MGI PMID:9636176 PMID:15755804 NCBI chr 1:33,758,991...33,781,642
Ensembl chr 1:33,758,968...33,781,645 		JBrowse link
G Ror2 receptor tyrosine kinase-like orphan receptor 2 acts_upstream_of_or_within IGI
IMP		 (PMID:20660756) MGI PMID:20660756 NCBI chr13:53,263,353...53,440,160
Ensembl chr13:53,263,348...53,440,160 		JBrowse link
G Sall1 spalt like transcription factor 1 involved_in ISO
IMP		 (PMID:18470945) GO_Central
UniProt		 PMID:18470945 GO_REF:0000119 NCBI chr 8:89,753,867...89,770,790
Ensembl chr 8:89,753,863...89,770,790 		JBrowse link
G Sfrp2 secreted frizzled-related protein 2 acts_upstream_of_or_within IMP (PMID:18729207) MGI PMID:18729207 NCBI chr 3:83,673,628...83,681,621
Ensembl chr 3:83,673,628...83,681,623 		JBrowse link
G Shh sonic hedgehog acts_upstream_of_or_within
involved_in		 IGI
IMP		 (PMID:15930098)
(PMID:11044396)
(PMID:20660756)
(PMID:17504940), (PMID:17504941)		 MGI
Roslin_Institute		 PMID:11044396 PMID:15930098 PMID:17504940 PMID:17504941 PMID:20660756 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
G Smad4 SMAD family member 4 involved_in IMP (PMID:23034633) CACAO PMID:23034633 NCBI chr18:73,767,861...73,836,862
Ensembl chr18:73,772,080...73,836,851 		JBrowse link
G Tbc1d32 TBC1 domain family, member 32 acts_upstream_of_or_within IMP (PMID:20159594) MGI PMID:20159594 NCBI chr10:55,890,389...56,106,495
Ensembl chr10:55,890,389...56,104,785 		JBrowse link
G Tbx2 T-box 2 involved_in IMP (PMID:15459098) BHF-UCL PMID:15459098 NCBI chr11:85,723,441...85,732,774
Ensembl chr11:85,723,377...85,732,774 		JBrowse link
G Tbx3 T-box 3 involved_in
acts_upstream_of_or_within		 IMP
ISS
ISO		 (PMID:27046536)
(PMID:23844108)		 MGI
UniProt
GO_Central		 PMID:23844108 PMID:27046536 GO_REF:0000024 GO_REF:0000119 NCBI chr 5:119,808,600...119,822,789
Ensembl chr 5:119,808,734...119,822,789 		JBrowse link
G Tmem107 transmembrane protein 107 involved_in IMP (PMID:22698544) UniProt PMID:22698544 NCBI chr11:68,961,635...68,964,119
Ensembl chr11:68,961,632...68,964,119 		JBrowse link
G Tmem231 transmembrane protein 231 acts_upstream_of_or_within IMP (PMID:22179047) MGI PMID:22179047 NCBI chr 8:112,638,639...112,660,445
Ensembl chr 8:112,638,643...112,660,513 		JBrowse link
G Traf3ip1 TRAF3 interacting protein 1 acts_upstream_of_or_within IMP (PMID:21945076) MGI PMID:21945076 NCBI chr 1:91,422,311...91,457,029
Ensembl chr 1:91,422,369...91,457,029 		JBrowse link
G Ttbk2 tau tubulin kinase 2 acts_upstream_of_or_within IMP (PMID:23141541) MGI PMID:23141541 NCBI chr 2:120,563,297...120,681,111
Ensembl chr 2:120,563,297...120,681,085 		JBrowse link
G Tulp3 TUB like protein 3 acts_upstream_of_or_within IMP (PMID:19286674), (PMID:19334287) MGI PMID:19286674 PMID:19334287 NCBI chr 6:128,298,103...128,332,833
Ensembl chr 6:128,298,124...128,332,814 		JBrowse link
G Twist1 twist basic helix-loop-helix transcription factor 1 acts_upstream_of_or_within IMP (PMID:15030764) MGI PMID:15030764 NCBI chr12:34,007,670...34,009,830
Ensembl chr12:34,007,670...34,009,828 		JBrowse link
G Wdpcp WD repeat containing planar cell polarity effector acts_upstream_of_or_within
involved_in		 IMP
ISO		 (PMID:24302887)
(PMID:27158779)		 MGI
GO_Central		 PMID:24302887 PMID:27158779 NCBI chr11:21,521,969...21,848,686
Ensembl chr11:21,522,235...21,848,989 		JBrowse link
G Wnt5a wingless-type MMTV integration site family, member 5A acts_upstream_of_or_within IMP (PMID:19795512) MGI PMID:19795512 NCBI chr14:28,224,962...28,249,405
Ensembl chr14:28,226,707...28,249,405 		JBrowse link
G Wnt7a wingless-type MMTV integration site family, member 7A involved_in ISO
IEA		 GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr 6:91,340,963...91,388,335
Ensembl chr 6:91,340,963...91,388,345 		JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 involved_in ISO RGD
GO_Central		 PMID:19191224 GO_REF:0000096 RGD:2312786 NCBI chr 9:48,563,097...48,747,525
Ensembl chr 9:48,565,597...48,747,522 		JBrowse link
embryonic forelimb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a2 aldehyde dehydrogenase family 1, subfamily A2 acts_upstream_of_or_within IMP (PMID:15069081), (PMID:20034106) MGI PMID:15069081 PMID:20034106 NCBI chr 9:71,123,071...71,203,525
Ensembl chr 9:71,123,071...71,203,525 		JBrowse link
G Alx3 aristaless-like homeobox 3 acts_upstream_of_or_within IGI (PMID:11641221) MGI PMID:11641221 NCBI chr 3:107,502,347...107,513,191
Ensembl chr 3:107,502,347...107,513,092 		JBrowse link
G Alx4 aristaless-like homeobox 4 acts_upstream_of_or_within IGI (PMID:11641221) MGI PMID:11641221 NCBI chr 2:93,472,779...93,511,686
Ensembl chr 2:93,472,729...93,511,684 		JBrowse link
G Cacna1c calcium channel, voltage-dependent, L type, alpha 1C subunit involved_in ISO GO_Central GO_REF:0000119 NCBI chr 6:118,564,201...119,174,345
Ensembl chr 6:118,564,201...119,173,851 		JBrowse link
G Crabp2 cellular retinoic acid binding protein II acts_upstream_of_or_within IMP (PMID:7720575) MGI PMID:7720575 NCBI chr 3:87,856,000...87,860,679
Ensembl chr 3:87,855,973...87,860,683 		JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within IDA (PMID:15371327) MGI PMID:15371327 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573 		JBrowse link
G En1 engrailed 1 acts_upstream_of_or_within IGI (PMID:9362463) MGI PMID:9362463 NCBI chr 1:120,530,246...120,535,719
Ensembl chr 1:120,530,147...120,535,721 		JBrowse link
G Hoxa11 homeobox A11 acts_upstream_of_or_within IGI (PMID:22916278) MGI PMID:22916278 NCBI chr 6:52,219,086...52,222,784
Ensembl chr 6:52,219,086...52,222,790 		JBrowse link
G Hoxa13 homeobox A13 acts_upstream_of_or_within IMP (PMID:15733672) MGI PMID:15733672 NCBI chr 6:52,235,833...52,237,865
Ensembl chr 6:52,234,674...52,237,788 		JBrowse link
G Hoxa9 homeobox A9 acts_upstream_of_or_within IGI (PMID:8625797) MGI PMID:8625797 NCBI chr 6:52,200,077...52,203,169
Ensembl chr 6:52,200,080...52,208,069 		JBrowse link
G Hoxd11 homeobox D11 acts_upstream_of_or_within IGI (PMID:22916278) MGI PMID:22916278 NCBI chr 2:74,509,902...74,517,360
Ensembl chr 2:74,509,901...74,517,360 		JBrowse link
G Hoxd9 homeobox D9 acts_upstream_of_or_within IGI
IMP		 (PMID:8625797) MGI PMID:8625797 NCBI chr 2:74,528,107...74,530,552
Ensembl chr 2:74,528,071...74,530,552 		JBrowse link
G Ift122 intraflagellar transport 122 involved_in IMP (PMID:21209331) BHF-UCL PMID:21209331 NCBI chr 6:115,830,340...115,903,660
Ensembl chr 6:115,830,431...115,903,660 		JBrowse link
G Lnpk lunapark, ER junction formation factor acts_upstream_of_or_within IMP (PMID:9342042)
(PMID:22916278)		 MGI PMID:9342042 PMID:22916278 NCBI chr 2:74,345,180...74,409,802
Ensembl chr 2:74,350,635...74,409,779 		JBrowse link
G Lrp6 low density lipoprotein receptor-related protein 6 acts_upstream_of_or_within IMP
IGI		 (PMID:11029008)
(PMID:15880584)
(PMID:19653321)
(PMID:18256198)		 MGI PMID:11029008 PMID:15880584 PMID:18256198 PMID:19653321 NCBI chr 6:134,423,439...134,543,876
Ensembl chr 6:134,423,439...134,543,928 		JBrowse link
G Mecom MDS1 and EVI1 complex locus acts_upstream_of_or_within IMP (PMID:17029558) MGI PMID:17029558 NCBI chr 3:30,005,445...30,563,937
Ensembl chr 3:30,005,445...30,602,157 		JBrowse link
G Msx1 msh homeobox 1 acts_upstream_of_or_within IGI (PMID:21465616) MGI PMID:21465616 NCBI chr 5:37,977,835...37,981,929
Ensembl chr 5:37,977,829...37,981,927 		JBrowse link
G Msx2 msh homeobox 2 acts_upstream_of_or_within IGI (PMID:21465616) MGI PMID:21465616 NCBI chr13:53,620,917...53,626,816
Ensembl chr13:53,620,920...53,627,110 		JBrowse link
G Nipbl NIPBL cohesin loading factor involved_in ISO
IEA		 GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr15:8,319,308...8,494,799
Ensembl chr15:8,320,101...8,473,947 		JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in IGI (PMID:21262216) BHF-UCL PMID:21262216 NCBI chr12:9,624,442...9,631,500
Ensembl chr12:9,620,116...9,631,500 		JBrowse link
G Osr2 odd-skipped related 2 involved_in IGI
IEP		 (PMID:21262216)
(PMID:11520675)		 BHF-UCL
UniProt		 PMID:11520675 PMID:21262216 NCBI chr15:35,296,244...35,303,451
Ensembl chr15:35,296,244...35,303,451 		JBrowse link
G Rdh10 retinol dehydrogenase 10 (all-trans) acts_upstream_of_or_within IMP (PMID:17473173) MGI PMID:17473173 NCBI chr 1:16,176,106...16,202,774
Ensembl chr 1:16,175,998...16,203,958 		JBrowse link
G Reck reversion-inducing-cysteine-rich protein with kazal motifs acts_upstream_of_or_within IMP (PMID:23213437) MGI PMID:23213437 NCBI chr 4:43,875,521...43,944,806
Ensembl chr 4:43,875,530...43,944,806 		JBrowse link
G Rpgrip1l Rpgrip1-like acts_upstream_of_or_within IMP (PMID:17553904) MGI PMID:17553904 NCBI chr 8:91,943,658...92,039,919
Ensembl chr 8:91,943,658...92,039,890 		JBrowse link
G Rspo2 R-spondin 2 acts_upstream_of_or_within IGI
IMP		 (PMID:18256198) MGI PMID:18256198 NCBI chr15:42,884,184...43,034,990
Ensembl chr15:42,884,190...43,034,222 		JBrowse link
G Runx2 runt related transcription factor 2 acts_upstream_of_or_within IMP (PMID:22916278) MGI PMID:22916278 NCBI chr17:44,806,873...45,125,518
Ensembl chr17:44,806,874...45,125,684 		JBrowse link
G Shh sonic hedgehog acts_upstream_of_or_within IMP (PMID:11118883), (PMID:11476582) MGI PMID:11118883 PMID:11476582 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
G Shox2 SHOX homeobox 2 acts_upstream_of_or_within IMP (PMID:22916278) MGI PMID:22916278 NCBI chr 3:66,879,056...66,889,104
Ensembl chr 3:66,879,060...66,889,104 		JBrowse link
G Tbx3 T-box 3 involved_in ISO
ISS		 GO_Central
UniProt		 GO_REF:0000024 GO_REF:0000119 NCBI chr 5:119,808,600...119,822,789
Ensembl chr 5:119,808,734...119,822,789 		JBrowse link
G Tbx5 T-box 5 acts_upstream_of_or_within
involved_in		 IMP
ISS
ISO		 (PMID:11572777), (PMID:12490567) MGI
UniProt
GO_Central		 PMID:11572777 PMID:12490567 GO_REF:0000024 GO_REF:0000119 NCBI chr 5:119,934,581...120,023,285
Ensembl chr 5:119,970,733...120,023,284 		JBrowse link
G Tfap2a transcription factor AP-2, alpha involved_in IMP (PMID:9811866) UniProt PMID:9811866 NCBI chr13:40,867,278...40,891,715
Ensembl chr13:40,868,778...40,891,852 		JBrowse link
G Trp63 transformation related protein 63 acts_upstream_of_or_within IMP (PMID:25503409) MGI PMID:25503409 NCBI chr16:25,502,513...25,710,842
Ensembl chr16:25,502,513...25,710,852 		JBrowse link
G Twist1 twist basic helix-loop-helix transcription factor 1 acts_upstream_of_or_within IMP (PMID:12175489) MGI PMID:12175489 NCBI chr12:34,007,670...34,009,830
Ensembl chr12:34,007,670...34,009,828 		JBrowse link
G Wnt3 wingless-type MMTV integration site family, member 3 acts_upstream_of_or_within IMP (PMID:12569130) MGI PMID:12569130 NCBI chr11:103,665,000...103,708,854
Ensembl chr11:103,664,976...103,708,783 		JBrowse link
G Wnt7a wingless-type MMTV integration site family, member 7A acts_upstream_of_or_within
involved_in		 IMP
ISO
IGI		 (PMID:9362463)
(PMID:15880584)		 MGI
GO_Central		 PMID:9362463 PMID:15880584 GO_REF:0000119 MGI:48652 NCBI chr 6:91,340,963...91,388,335
Ensembl chr 6:91,340,963...91,388,345 		JBrowse link
G Wnt9a wingless-type MMTV integration site family, member 9A acts_upstream_of_or_within IDA (PMID:15371327) MGI PMID:15371327 NCBI chr11:59,197,675...59,224,378
Ensembl chr11:59,197,754...59,224,378 		JBrowse link
embryonic hindlimb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aff3 AF4/FMR2 family, member 3 involved_in ISO
IEP		 (PMID:18616733) GO_Central
BHF-UCL		 PMID:18616733 GO_REF:0000119 NCBI chr 1:38,212,936...38,704,036
Ensembl chr 1:38,216,407...38,704,036 		JBrowse link
G Alx3 aristaless-like homeobox 3 acts_upstream_of_or_within IGI (PMID:11641221) MGI PMID:11641221 NCBI chr 3:107,502,347...107,513,191
Ensembl chr 3:107,502,347...107,513,092 		JBrowse link
G Alx4 aristaless-like homeobox 4 acts_upstream_of_or_within IGI (PMID:11641221) MGI PMID:11641221 NCBI chr 2:93,472,779...93,511,686
Ensembl chr 2:93,472,729...93,511,684 		JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within IGI (PMID:10964473) MGI PMID:10964473 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126 		JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 acts_upstream_of_or_within IMP (PMID:16207732) MGI PMID:16207732 NCBI chr 4:8,690,345...8,868,449
Ensembl chr 4:8,690,406...8,867,659 		JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within IMP (PMID:12923052)
(PMID:18231602)		 MGI PMID:12923052 PMID:18231602 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573 		JBrowse link
G Dicer1 dicer 1, ribonuclease type III acts_upstream_of_or_within IMP (PMID:16319892) MGI PMID:16319892 NCBI chr12:104,654,001...104,718,331
Ensembl chr12:104,654,001...104,718,211 		JBrowse link
G Fgf4 fibroblast growth factor 4 acts_upstream_of_or_within IGI (PMID:16245339) MGI PMID:16245339 NCBI chr 7:144,415,123...144,418,982
Ensembl chr 7:144,401,104...144,418,980 		JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within IGI (PMID:16245339) MGI PMID:16245339 NCBI chr19:45,724,930...45,731,380
Ensembl chr19:45,725,237...45,731,354 		JBrowse link
G Gnas GNAS complex locus acts_upstream_of_or_within IMP (PMID:15797856) MGI PMID:15797856 NCBI chr 2:174,126,113...174,188,537
Ensembl chr 2:174,126,113...174,188,537 		JBrowse link
G Gpc3 glypican 3 acts_upstream_of_or_within IGI (PMID:10964473) MGI PMID:10964473 NCBI chr  X:51,361,303...51,702,851
Ensembl chr  X:51,361,303...51,702,827 		JBrowse link
G Lmbr1 limb region 1 acts_upstream_of_or_within ISO MGI GO_REF:0000008 NCBI chr 5:29,434,800...29,583,414
Ensembl chr 5:29,481,000...29,485,295
Ensembl chr 5:29,481,000...29,485,295 		JBrowse link
G Lrp6 low density lipoprotein receptor-related protein 6 acts_upstream_of_or_within IMP
IGI		 (PMID:19653321)
(PMID:15880584)
(PMID:18256198)		 MGI PMID:15880584 PMID:18256198 PMID:19653321 NCBI chr 6:134,423,439...134,543,876
Ensembl chr 6:134,423,439...134,543,928 		JBrowse link
G Mecom MDS1 and EVI1 complex locus acts_upstream_of_or_within IMP (PMID:17029558) MGI PMID:17029558 NCBI chr 3:30,005,445...30,563,937
Ensembl chr 3:30,005,445...30,602,157 		JBrowse link
G Med1 mediator complex subunit 1 acts_upstream_of_or_within IMP (PMID:14500757) MGI PMID:14500757 NCBI chr11:98,042,980...98,084,121
Ensembl chr11:98,042,980...98,084,119 		JBrowse link
G Mmp13 matrix metallopeptidase 13 ISO RGD PMID:11850435 RGD:1582550 NCBI chr 9:7,272,514...7,283,333
Ensembl chr 9:7,272,514...7,283,331 		JBrowse link
G Msx1 msh homeobox 1 acts_upstream_of_or_within IGI (PMID:21465616) MGI PMID:21465616 NCBI chr 5:37,977,835...37,981,929
Ensembl chr 5:37,977,829...37,981,927 		JBrowse link
G Msx2 msh homeobox 2 acts_upstream_of_or_within IGI (PMID:21465616) MGI PMID:21465616 NCBI chr13:53,620,917...53,626,816
Ensembl chr13:53,620,920...53,627,110 		JBrowse link
G Notch1 notch 1 acts_upstream_of_or_within IMP (PMID:16245338) MGI PMID:16245338 NCBI chr 2:26,347,914...26,393,834
Ensembl chr 2:26,347,915...26,406,675 		JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in IGI (PMID:21262216) BHF-UCL PMID:21262216 NCBI chr12:9,624,442...9,631,500
Ensembl chr12:9,620,116...9,631,500 		JBrowse link
G Osr2 odd-skipped related 2 involved_in IEP
IGI		 (PMID:11520675)
(PMID:21262216)		 UniProt
BHF-UCL		 PMID:11520675 PMID:21262216 NCBI chr15:35,296,244...35,303,451
Ensembl chr15:35,296,244...35,303,451 		JBrowse link
G Pitx1 paired-like homeodomain transcription factor 1 acts_upstream_of_or_within
involved_in		 IGI
IMP		 (PMID:18231602)
(PMID:22071103)		 MGI
CACAO		 PMID:18231602 PMID:22071103 NCBI chr13:55,972,857...55,984,002
Ensembl chr13:55,972,864...55,984,005 		JBrowse link
G Pitx2 paired-like homeodomain transcription factor 2 acts_upstream_of_or_within IGI (PMID:18231602) MGI PMID:18231602 NCBI chr 3:128,993,527...129,013,243
Ensembl chr 3:128,993,527...129,013,240 		JBrowse link
G Rarb retinoic acid receptor, beta acts_upstream_of_or_within IGI (PMID:10075839) MGI PMID:10075839 NCBI chr14:5,387,365...6,038,924
Ensembl chr14:5,650,540...6,038,924 		JBrowse link
G Rarg retinoic acid receptor, gamma acts_upstream_of_or_within IGI (PMID:10075839) MGI PMID:10075839 NCBI chr15:102,143,373...102,165,891
Ensembl chr15:102,143,373...102,165,952 		JBrowse link
G Rpgrip1l Rpgrip1-like acts_upstream_of_or_within IMP (PMID:17553904) MGI PMID:17553904 NCBI chr 8:91,943,658...92,039,919
Ensembl chr 8:91,943,658...92,039,890 		JBrowse link
G Rspo2 R-spondin 2 acts_upstream_of_or_within IGI
IMP		 (PMID:18256198) MGI PMID:18256198 NCBI chr15:42,884,184...43,034,990
Ensembl chr15:42,884,190...43,034,222 		JBrowse link
G Shh sonic hedgehog acts_upstream_of_or_within IMP (PMID:11118883) MGI PMID:11118883 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within IMP (PMID:16192310) MGI PMID:16192310 NCBI chr 9:21,527,377...21,615,526
Ensembl chr 9:21,527,465...21,615,526 		JBrowse link
G Tbx3 T-box 3 acts_upstream_of_or_within IMP (PMID:23844108) MGI PMID:23844108 NCBI chr 5:119,808,600...119,822,789
Ensembl chr 5:119,808,734...119,822,789 		JBrowse link
G Tbx4 T-box 4 involved_in ISS
ISO		 UniProt
GO_Central		 GO_REF:0000024 GO_REF:0000119 NCBI chr11:85,777,193...85,806,923
Ensembl chr11:85,777,248...85,806,923 		JBrowse link
G Trp63 transformation related protein 63 acts_upstream_of_or_within IMP (PMID:25503409) MGI PMID:25503409 NCBI chr16:25,502,513...25,710,842
Ensembl chr16:25,502,513...25,710,852 		JBrowse link
G Twist1 twist basic helix-loop-helix transcription factor 1 involved_in IMP (PMID:8988167) BHF-UCL PMID:8988167 NCBI chr12:34,007,670...34,009,830
Ensembl chr12:34,007,670...34,009,828 		JBrowse link
G Wnt3 wingless-type MMTV integration site family, member 3 acts_upstream_of_or_within IMP (PMID:12569130) MGI PMID:12569130 NCBI chr11:103,665,000...103,708,854
Ensembl chr11:103,664,976...103,708,783 		JBrowse link
G Wnt7a wingless-type MMTV integration site family, member 7A acts_upstream_of_or_within
involved_in		 IGI
ISO		 (PMID:15880584) MGI
GO_Central		 PMID:15880584 GO_REF:0000119 NCBI chr 6:91,340,963...91,388,335
Ensembl chr 6:91,340,963...91,388,345 		JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 involved_in
acts_upstream_of_or_within		 ISO
IMP		 (PMID:10835630) RGD
GO_Central
MGI		 PMID:10835630 PMID:19191224 GO_REF:0000096 RGD:2312786 NCBI chr 9:48,563,097...48,747,525
Ensembl chr 9:48,565,597...48,747,522 		JBrowse link
embryonic limb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acd adrenocortical dysplasia acts_upstream_of_or_within IMP (PMID:15537664) MGI PMID:15537664 NCBI chr 8:106,424,789...106,427,748
Ensembl chr 8:106,422,492...106,427,734 		JBrowse link
G Aldh1a2 aldehyde dehydrogenase family 1, subfamily A2 acts_upstream_of_or_within IMP (PMID:14623241) MGI PMID:14623241 NCBI chr 9:71,123,071...71,203,525
Ensembl chr 9:71,123,071...71,203,525 		JBrowse link
G Alx1 ALX homeobox 1 acts_upstream_of_or_within IGI (PMID:9847249) MGI PMID:9847249 NCBI chr10:102,834,564...102,865,501
Ensembl chr10:102,834,568...102,866,076 		JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within IMP
IGI		 (PMID:9664686) MGI PMID:9664686 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126 		JBrowse link
G Bmp7 bone morphogenetic protein 7 acts_upstream_of_or_within IGI
IMP		 (PMID:9664686) MGI PMID:9664686 NCBI chr 2:172,709,805...172,782,114
Ensembl chr 2:172,709,805...172,782,114 		JBrowse link
G C2cd3 C2 calcium-dependent domain containing 3 acts_upstream_of_or_within IMP (PMID:19004860) MGI PMID:19004860 NCBI chr 7:100,021,440...100,119,366
Ensembl chr 7:100,021,440...100,119,359 		JBrowse link
G Chst11 carbohydrate sulfotransferase 11 acts_upstream_of_or_within IMP (PMID:16079159) MGI PMID:16079159 NCBI chr10:82,820,274...83,031,738
Ensembl chr10:82,821,332...83,031,734 		JBrowse link
G Cyp26b1 cytochrome P450, family 26, subfamily b, polypeptide 1 acts_upstream_of_or_within IMP (PMID:15030763) MGI PMID:15030763 NCBI chr 6:84,548,396...84,570,890
Ensembl chr 6:84,548,396...84,570,890 		JBrowse link
G Dicer1 dicer 1, ribonuclease type III acts_upstream_of_or_within IMP (PMID:16040801) MGI PMID:16040801 NCBI chr12:104,654,001...104,718,331
Ensembl chr12:104,654,001...104,718,211 		JBrowse link
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 acts_upstream_of_or_within IGI (PMID:15242796) MGI PMID:15242796 NCBI chr19:30,523,276...30,526,896
Ensembl chr19:30,523,263...30,527,065 		JBrowse link
G Dlx5 distal-less homeobox 5 acts_upstream_of_or_within IGI (PMID:18326838)
(PMID:12112878)		 MGI PMID:12112878 PMID:18326838 NCBI chr 6:6,877,801...6,882,068
Ensembl chr 6:6,877,805...6,882,085 		JBrowse link
G Dlx6 distal-less homeobox 6 acts_upstream_of_or_within IGI (PMID:12112878)
(PMID:18326838)		 MGI PMID:12112878 PMID:18326838 NCBI chr 6:6,863,272...6,867,965
Ensembl chr 6:6,863,334...6,868,568 		JBrowse link
G Dync2h1 dynein cytoplasmic 2 heavy chain 1 acts_upstream_of_or_within IMP (PMID:16229832) MGI PMID:16229832 NCBI chr 9:6,928,550...7,177,619
Ensembl chr 9:6,928,503...7,184,446 		JBrowse link
G En1 engrailed 1 acts_upstream_of_or_within
involved_in		 IGI
IMP		 (PMID:15242796)
(PMID:7624797)
(PMID:8684466)		 MGI
ParkinsonsUK-UCL		 PMID:7624797 PMID:8684466 PMID:15242796 NCBI chr 1:120,530,246...120,535,719
Ensembl chr 1:120,530,147...120,535,721 		JBrowse link
G Fbn2 fibrillin 2 acts_upstream_of_or_within IMP (PMID:11350121)
(PMID:11285249)		 MGI PMID:11285249 PMID:11350121 NCBI chr18:58,141,689...58,343,200
Ensembl chr18:58,141,695...58,343,559 		JBrowse link
G Fgf4 fibroblast growth factor 4 acts_upstream_of_or_within IGI (PMID:15328019) MGI PMID:15328019 NCBI chr 7:144,415,123...144,418,982
Ensembl chr 7:144,401,104...144,418,980 		JBrowse link
G Fgf9 fibroblast growth factor 9 acts_upstream_of_or_within IMP (PMID:17576930) MGI PMID:17576930 NCBI chr14:58,308,543...58,350,311
Ensembl chr14:58,308,004...58,350,177 		JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 acts_upstream_of_or_within IMP (PMID:16207751) MGI PMID:16207751 NCBI chr 8:26,008,808...26,067,819
Ensembl chr 8:26,003,670...26,065,734 		JBrowse link
G Fras1 Fraser extracellular matrix complex subunit 1 acts_upstream_of_or_within IMP (PMID:23469164) MGI PMID:23469164 NCBI chr 5:96,518,622...96,932,592
Ensembl chr 5:96,521,814...96,932,587 		JBrowse link
G Gdf5 growth differentiation factor 5 acts_upstream_of_or_within IMP (PMID:15542031) MGI PMID:15542031 NCBI chr 2:155,782,943...155,787,204
Ensembl chr 2:155,782,943...155,787,287 		JBrowse link
G Gja5 gap junction protein, alpha 5 acts_upstream_of_or_within IMP (PMID:15923624) MGI PMID:15923624 NCBI chr 3:96,939,718...96,960,950
Ensembl chr 3:96,812,009...96,984,732 		JBrowse link
G Gli3 GLI-Kruppel family member GLI3 acts_upstream_of_or_within IGI
IMP		 (PMID:19422820)
(PMID:16284117)
(PMID:12142027), (PMID:12435361), (PMID:12435627), (PMID:19809516), (PMID:8387379)		 MGI PMID:8387379 PMID:12142027 PMID:12435361 PMID:12435627 PMID:16284117 More... NCBI chr13:15,638,308...15,904,611
Ensembl chr13:15,637,820...15,904,611 		JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist acts_upstream_of_or_within IMP (PMID:12808456) MGI PMID:12808456 NCBI chr 2:113,579,020...113,588,993
Ensembl chr 2:113,576,509...113,588,991 		JBrowse link
G Hnf1a HNF1 homeobox A acts_upstream_of_or_within IGI (PMID:10090727) MGI PMID:10090727 NCBI chr 5:115,087,039...115,109,121
Ensembl chr 5:115,087,039...115,109,153 		JBrowse link
G Hoxa10 homeobox A10 acts_upstream_of_or_within IGI (PMID:12869760) MGI PMID:12869760 NCBI chr 6:52,208,177...52,217,658
Ensembl chr 6:52,208,177...52,217,834 		JBrowse link
G Hoxa11 homeobox A11 acts_upstream_of_or_within IGI (PMID:14668414) MGI PMID:14668414 NCBI chr 6:52,219,086...52,222,784
Ensembl chr 6:52,219,086...52,222,790 		JBrowse link
G Hoxc10 homeobox C10 acts_upstream_of_or_within IGI (PMID:12869760) MGI PMID:12869760 NCBI chr15:102,875,231...102,880,333
Ensembl chr15:102,875,231...102,880,328 		JBrowse link
G Hoxd10 homeobox D10 acts_upstream_of_or_within IGI (PMID:12869760) MGI PMID:12869760 NCBI chr 2:74,514,617...74,525,450
Ensembl chr 2:74,522,268...74,525,449 		JBrowse link
G Hoxd11 homeobox D11 acts_upstream_of_or_within IGI (PMID:14668414) MGI PMID:14668414 NCBI chr 2:74,509,902...74,517,360
Ensembl chr 2:74,509,901...74,517,360 		JBrowse link
G Hoxd13 homeobox D13 acts_upstream_of_or_within IMP (PMID:11850178) MGI PMID:11850178 NCBI chr 2:74,498,569...74,501,947
Ensembl chr 2:74,498,654...74,501,943 		JBrowse link
G Lef1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within IGI (PMID:10090727) MGI PMID:10090727 NCBI chr 3:130,903,972...131,018,006
Ensembl chr 3:130,904,120...131,018,005 		JBrowse link
G Lmx1b LIM homeobox transcription factor 1 beta involved_in NAS (PMID:10767331) UniProt PMID:10767331 NCBI chr 2:33,450,977...33,531,219
Ensembl chr 2:33,450,977...33,530,620 		JBrowse link
G Lrp4 low density lipoprotein receptor-related protein 4 acts_upstream_of_or_within IMP (PMID:17119023)
(PMID:16207730)		 MGI PMID:16207730 PMID:17119023 NCBI chr 2:91,287,794...91,344,246
Ensembl chr 2:91,287,856...91,344,124 		JBrowse link
G Lrp6 low density lipoprotein receptor-related protein 6 acts_upstream_of_or_within IGI (PMID:20359476) MGI PMID:20359476 NCBI chr 6:134,423,439...134,543,876
Ensembl chr 6:134,423,439...134,543,928 		JBrowse link
G Mbnl1 muscleblind like splicing regulator 1 involved_in IEP (PMID:12915312) UniProt PMID:12915312 NCBI chr 3:60,380,209...60,537,171
Ensembl chr 3:60,380,251...60,537,171 		JBrowse link
G Megf8 multiple EGF-like-domains 8 involved_in IMP (PMID:24052814) UniProt PMID:24052814 NCBI chr 7:25,016,589...25,065,342
Ensembl chr 7:25,016,589...25,065,342 		JBrowse link
G Mosmo modulator of smoothened acts_upstream_of_or_within IMP (PMID:34486668) MGI PMID:34486668 NCBI chr 7:120,276,814...120,334,079
Ensembl chr 7:120,276,841...120,334,077 		JBrowse link
G Msx1 msh homeobox 1 acts_upstream_of_or_within IGI (PMID:19422820)
(PMID:15930102)		 MGI PMID:15930102 PMID:19422820 NCBI chr 5:37,977,835...37,981,929
Ensembl chr 5:37,977,829...37,981,927 		JBrowse link
G Msx2 msh homeobox 2 acts_upstream_of_or_within IGI (PMID:19422820)
(PMID:15930102)		 MGI PMID:15930102 PMID:19422820 NCBI chr13:53,620,917...53,626,816
Ensembl chr13:53,620,920...53,627,110 		JBrowse link
G Mustn1 musculoskeletal, embryonic nuclear protein 1 ISO RGD PMID:14718386 RGD:1302424 NCBI chr14:30,601,214...30,603,567
Ensembl chr14:30,601,157...30,603,567 		JBrowse link
G Notch1 notch 1 acts_upstream_of_or_within IGI (PMID:16169548) MGI PMID:16169548 NCBI chr 2:26,347,914...26,393,834
Ensembl chr 2:26,347,915...26,406,675 		JBrowse link
G Notch2 notch 2 acts_upstream_of_or_within IGI (PMID:16169548) MGI PMID:16169548 NCBI chr 3:97,920,854...98,057,683
Ensembl chr 3:97,920,843...98,057,677 		JBrowse link
G Pbx1 pre B cell leukemia homeobox 1 acts_upstream_of_or_within IGI (PMID:16672333) MGI PMID:16672333 NCBI chr 1:167,946,933...168,259,898
Ensembl chr 1:167,946,933...168,259,839 		JBrowse link
G Pbx2 pre B cell leukemia homeobox 2 acts_upstream_of_or_within IGI (PMID:16672333) MGI PMID:16672333 NCBI chr17:34,811,233...34,816,374
Ensembl chr17:34,810,240...34,816,374 		JBrowse link
G Prickle1 prickle planar cell polarity protein 1 involved_in IMP (PMID:23913870) MGI PMID:23913870 NCBI chr15:93,396,992...93,494,147
Ensembl chr15:93,396,995...93,493,772 		JBrowse link
G Prrx1 paired related homeobox 1 acts_upstream_of_or_within IGI (PMID:9729491), (PMID:9882503) MGI PMID:9729491 PMID:9882503 NCBI chr 1:163,072,688...163,142,714
Ensembl chr 1:163,072,688...163,141,279 		JBrowse link
G Prrx2 paired related homeobox 2 acts_upstream_of_or_within IGI (PMID:9729491), (PMID:9882503) MGI PMID:9729491 PMID:9882503 NCBI chr 2:30,735,076...30,771,263
Ensembl chr 2:30,724,984...30,771,263 		JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within IGI (PMID:16169548) MGI PMID:16169548 NCBI chr12:83,734,926...83,781,869
Ensembl chr12:83,734,926...83,781,973 		JBrowse link
G Psen2 presenilin 2 acts_upstream_of_or_within IGI (PMID:16169548) MGI PMID:16169548 NCBI chr 1:180,054,569...180,091,030
Ensembl chr 1:180,054,569...180,091,003 		JBrowse link
G Ptch1 patched 1 acts_upstream_of_or_within IMP
IGI		 (PMID:11784021)
(PMID:11389830)		 MGI PMID:11389830 PMID:11784021 NCBI chr13:63,656,142...63,721,274
Ensembl chr13:63,656,142...63,721,412 		JBrowse link
G Sall4 spalt like transcription factor 4 acts_upstream_of_or_within IMP
IGI		 (PMID:16380715) MGI PMID:16380715 NCBI chr 2:168,590,252...168,609,121
Ensembl chr 2:168,590,252...168,609,863 		JBrowse link
G Shh sonic hedgehog acts_upstream_of_or_within IMP
IGI		 (PMID:15315763)
(PMID:19422820)
(PMID:11389830)		 MGI PMID:11389830 PMID:15315763 PMID:19422820 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
G Shox2 SHOX homeobox 2 acts_upstream_of_or_within IMP (PMID:16537395)
(PMID:17481601)		 MGI PMID:16537395 PMID:17481601 NCBI chr 3:66,879,056...66,889,104
Ensembl chr 3:66,879,060...66,889,104 		JBrowse link
G Ski ski sarcoma viral oncogene homolog (avian) acts_upstream_of_or_within IMP (PMID:12435627) MGI PMID:12435627 NCBI chr 4:155,238,532...155,307,536
Ensembl chr 4:155,238,532...155,307,049 		JBrowse link
G Sp8 trans-acting transcription factor 8 acts_upstream_of_or_within
involved_in		 IMP (PMID:14597661)
(PMID:15358670)		 MGI
UniProt		 PMID:14597661 PMID:15358670 NCBI chr12:118,809,968...118,816,313
Ensembl chr12:118,810,064...118,816,311 		JBrowse link
G Sp9 trans-acting transcription factor 9 involved_in IMP (PMID:15358670) UniProt PMID:15358670 NCBI chr 2:73,094,809...73,106,115
Ensembl chr 2:73,102,269...73,115,050 		JBrowse link
G Tbx4 T-box 4 acts_upstream_of_or_within IMP (PMID:12736212) MGI PMID:12736212 NCBI chr11:85,777,193...85,806,923
Ensembl chr11:85,777,248...85,806,923 		JBrowse link
G Tbx5 T-box 5 acts_upstream_of_or_within
involved_in		 IGI
ISS
ISO
IMP		 (PMID:16380715)
(PMID:12736217)		 MGI
UniProt
GO_Central		 PMID:12736217 PMID:16380715 GO_REF:0000024 GO_REF:0000119 NCBI chr 5:119,934,581...120,023,285
Ensembl chr 5:119,970,733...120,023,284 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in IMP (PMID:9217007) BHF-UCL PMID:9217007 NCBI chr 1:186,354,984...186,441,504
Ensembl chr 1:186,354,989...186,438,186 		JBrowse link
G Trp63 transformation related protein 63 acts_upstream_of_or_within IMP
IGI		 (PMID:10227293)
(PMID:18326838)		 MGI PMID:10227293 PMID:18326838 NCBI chr16:25,502,513...25,710,842
Ensembl chr16:25,502,513...25,710,852 		JBrowse link
G Twist1 twist basic helix-loop-helix transcription factor 1 acts_upstream_of_or_within IMP (PMID:12142027)
(PMID:11350121)
(PMID:15030764)		 MGI PMID:11350121 PMID:12142027 PMID:15030764 NCBI chr12:34,007,670...34,009,830
Ensembl chr12:34,007,670...34,009,828 		JBrowse link
G Wdr19 WD repeat domain 19 acts_upstream_of_or_within IMP (PMID:22228095) MGI PMID:22228095 NCBI chr 5:65,357,039...65,417,758
Ensembl chr 5:65,357,039...65,417,758 		JBrowse link
G Wnt5a wingless-type MMTV integration site family, member 5A acts_upstream_of_or_within IMP (PMID:10021340) MGI PMID:10021340 NCBI chr14:28,224,962...28,249,405
Ensembl chr14:28,226,707...28,249,405 		JBrowse link
G Wnt7a wingless-type MMTV integration site family, member 7A acts_upstream_of_or_within IGI (PMID:15242796) MGI PMID:15242796 NCBI chr 6:91,340,963...91,388,335
Ensembl chr 6:91,340,963...91,388,345 		JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 acts_upstream_of_or_within IMP MGI MGI:61278 NCBI chr 9:48,563,097...48,747,525
Ensembl chr 9:48,565,597...48,747,522 		JBrowse link
embryonic nail plate morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fzd6 frizzled class receptor 6 acts_upstream_of_or_within IMP (PMID:23439395) MGI PMID:23439395 NCBI chr15:38,869,673...38,901,587
Ensembl chr15:38,869,429...38,901,583 		JBrowse link
G Msx1 msh homeobox 1 acts_upstream_of_or_within
involved_in		 IGI
IMP
ISO		 (PMID:21465616)
(PMID:11369996)		 MGI
BHF-UCL
GO_Central		 PMID:11369996 PMID:21465616 GO_REF:0000119 NCBI chr 5:37,977,835...37,981,929
Ensembl chr 5:37,977,829...37,981,927 		JBrowse link
G Msx2 msh homeobox 2 acts_upstream_of_or_within IGI (PMID:21465616) MGI PMID:21465616 NCBI chr13:53,620,917...53,626,816
Ensembl chr13:53,620,920...53,627,110 		JBrowse link
G Prickle1 prickle planar cell polarity protein 1 involved_in IMP (PMID:23913870) MGI PMID:23913870 NCBI chr15:93,396,992...93,494,147
Ensembl chr15:93,396,995...93,493,772 		JBrowse link
embryonic skeletal limb joint morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 involved_in IGI (PMID:21262216) BHF-UCL PMID:21262216 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573 		JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within IMP (PMID:21185280) MGI PMID:21185280 NCBI chr15:52,931,657...53,209,579
Ensembl chr15:52,927,434...53,209,555 		JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in IGI (PMID:21262216) BHF-UCL PMID:21262216 NCBI chr12:9,624,442...9,631,500
Ensembl chr12:9,620,116...9,631,500 		JBrowse link
G Osr2 odd-skipped related 2 involved_in IGI (PMID:21262216) BHF-UCL PMID:21262216 NCBI chr15:35,296,244...35,303,451
Ensembl chr15:35,296,244...35,303,451 		JBrowse link
forelimb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ark2c arkadia (RNF111) C-terminal like ring finger ubiquitin ligase 2C acts_upstream_of_or_within IMP (PMID:23610558) MGI PMID:23610558 NCBI chr18:77,543,806...77,652,832
Ensembl chr18:77,543,806...77,652,857 		JBrowse link
G Fmn1 formin 1 acts_upstream_of_or_within IMP (PMID:17554679) MGI PMID:17554679 NCBI chr 2:113,158,029...113,547,113
Ensembl chr 2:113,158,081...113,547,112 		JBrowse link
G Gdf5 growth differentiation factor 5 acts_upstream_of_or_within IMP (PMID:8145850) MGI PMID:8145850 NCBI chr 2:155,782,943...155,787,204
Ensembl chr 2:155,782,943...155,787,287 		JBrowse link
G Hoxd10 homeobox D10 acts_upstream_of_or_within IGI (PMID:10642795) MGI PMID:10642795 NCBI chr 2:74,514,617...74,525,450
Ensembl chr 2:74,522,268...74,525,449 		JBrowse link
G Hoxd9 homeobox D9 acts_upstream_of_or_within IGI (PMID:10642795) MGI PMID:10642795 NCBI chr 2:74,528,107...74,530,552
Ensembl chr 2:74,528,071...74,530,552 		JBrowse link
G Nipbl NIPBL cohesin loading factor involved_in ISO GO_Central GO_REF:0000119 NCBI chr15:8,319,308...8,494,799
Ensembl chr15:8,320,101...8,473,947 		JBrowse link
G Sall1 spalt like transcription factor 1 acts_upstream_of_or_within IGI (PMID:19168674) MGI PMID:19168674 NCBI chr 8:89,753,867...89,770,790
Ensembl chr 8:89,753,863...89,770,790 		JBrowse link
G Sall3 spalt like transcription factor 3 acts_upstream_of_or_within IGI (PMID:19168674) MGI PMID:19168674 NCBI chr18:81,010,204...81,030,236
Ensembl chr18:81,009,591...81,029,986 		JBrowse link
G Tbx3 T-box 3 acts_upstream_of_or_within ISO (PMID:9207801) MGI PMID:9207801 NCBI chr 5:119,808,600...119,822,789
Ensembl chr 5:119,808,734...119,822,789 		JBrowse link
G Tbx5 T-box 5 acts_upstream_of_or_within ISO
IMP		 (PMID:8988164), (PMID:8988165)
(PMID:15621531)		 MGI PMID:8988164 PMID:8988165 PMID:15621531 NCBI chr 5:119,934,581...120,023,285
Ensembl chr 5:119,970,733...120,023,284 		JBrowse link
G Tfap2a transcription factor AP-2, alpha acts_upstream_of_or_within IMP (PMID:9811866) MGI PMID:9811866 NCBI chr13:40,867,278...40,891,715
Ensembl chr13:40,868,778...40,891,852 		JBrowse link
G Tfap2b transcription factor AP-2 beta involved_in IMP (PMID:21829553) UniProt PMID:21829553 NCBI chr 1:19,279,132...19,309,071
Ensembl chr 1:19,279,138...19,308,800 		JBrowse link
G Wnt7a wingless-type MMTV integration site family, member 7A acts_upstream_of_or_within IMP MGI MGI:48652 NCBI chr 6:91,340,963...91,388,335
Ensembl chr 6:91,340,963...91,388,345 		JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 acts_upstream_of_or_within IMP (PMID:10835630) MGI PMID:10835630 NCBI chr 9:48,563,097...48,747,525
Ensembl chr 9:48,565,597...48,747,522 		JBrowse link
hindlimb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp7a ATPase, copper transporting, alpha polypeptide acts_upstream_of_or_within IMP MGI MGI:61157 NCBI chr  X:105,070,830...105,171,766
Ensembl chr  X:105,070,882...105,168,532 		JBrowse link
G Bmpr1a bone morphogenetic protein receptor, type 1A acts_upstream_of_or_within IMP (PMID:16556916) MGI PMID:16556916 NCBI chr14:34,133,018...34,225,335
Ensembl chr14:34,132,691...34,225,298 		JBrowse link
G Fmn1 formin 1 acts_upstream_of_or_within IMP (PMID:17554679) MGI PMID:17554679 NCBI chr 2:113,158,029...113,547,113
Ensembl chr 2:113,158,081...113,547,112 		JBrowse link
G Gdf5 growth differentiation factor 5 acts_upstream_of_or_within IMP (PMID:8145850)
(PMID:17085896)		 MGI PMID:8145850 PMID:17085896 NCBI chr 2:155,782,943...155,787,204
Ensembl chr 2:155,782,943...155,787,287 		JBrowse link
G Hotair HOX transcript antisense RNA (non-protein coding) involved_in
acts_upstream_of_or_within		 IMP (PMID:25909911) MGI PMID:25909911 NCBI chr15:102,852,497...102,856,381
Ensembl chr15:102,852,494...102,862,817 		JBrowse link
G Hottip Hoxa distal transcript antisense RNA acts_upstream_of_or_within
involved_in		 IMP (PMID:25909911) MGI PMID:25909911 NCBI chr 6:52,239,760...52,244,588
Ensembl chr 6:52,239,760...52,244,588 		JBrowse link
G Hoxd10 homeobox D10 acts_upstream_of_or_within IGI (PMID:10642795) MGI PMID:10642795 NCBI chr 2:74,514,617...74,525,450
Ensembl chr 2:74,522,268...74,525,449 		JBrowse link
G Hoxd9 homeobox D9 acts_upstream_of_or_within IGI (PMID:10642795) MGI PMID:10642795 NCBI chr 2:74,528,107...74,530,552
Ensembl chr 2:74,528,071...74,530,552 		JBrowse link
G Pitx1 paired-like homeodomain transcription factor 1 acts_upstream_of_or_within IMP
IDA		 (PMID:10049363)
(PMID:15621531), (PMID:16989801)
(PMID:10101115)		 MGI PMID:10049363 PMID:10101115 PMID:15621531 PMID:16989801 NCBI chr13:55,972,857...55,984,002
Ensembl chr13:55,972,864...55,984,005 		JBrowse link
G Ptch1 patched 1 acts_upstream_of_or_within IMP (PMID:9262482) MGI PMID:9262482 NCBI chr13:63,656,142...63,721,274
Ensembl chr13:63,656,142...63,721,412 		JBrowse link
G Sall1 spalt like transcription factor 1 acts_upstream_of_or_within IGI (PMID:19168674) MGI PMID:19168674 NCBI chr 8:89,753,867...89,770,790
Ensembl chr 8:89,753,863...89,770,790 		JBrowse link
G Sall3 spalt like transcription factor 3 acts_upstream_of_or_within IGI (PMID:19168674) MGI PMID:19168674 NCBI chr18:81,010,204...81,030,236
Ensembl chr18:81,009,591...81,029,986 		JBrowse link
G Tfap2b transcription factor AP-2 beta involved_in IMP (PMID:21829553) UniProt PMID:21829553 NCBI chr 1:19,279,132...19,309,071
Ensembl chr 1:19,279,138...19,308,800 		JBrowse link
G Twist1 twist basic helix-loop-helix transcription factor 1 acts_upstream_of_or_within IMP (PMID:10700192) MGI PMID:10700192 NCBI chr12:34,007,670...34,009,830
Ensembl chr12:34,007,670...34,009,828 		JBrowse link
G Wnt7a wingless-type MMTV integration site family, member 7A acts_upstream_of_or_within IMP MGI MGI:48652 NCBI chr 6:91,340,963...91,388,335
Ensembl chr 6:91,340,963...91,388,345 		JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 acts_upstream_of_or_within IMP (PMID:10835630) MGI PMID:10835630 NCBI chr 9:48,563,097...48,747,525
Ensembl chr 9:48,565,597...48,747,522 		JBrowse link
limb bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col2a1 collagen, type II, alpha 1 involved_in IEP (PMID:20940257) UniProt PMID:20940257 NCBI chr15:97,873,483...97,902,525
Ensembl chr15:97,873,483...97,902,576 		JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within IMP (PMID:20404326) MGI PMID:20404326 NCBI chr15:52,931,657...53,209,579
Ensembl chr15:52,927,434...53,209,555 		JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within IMP (PMID:9784490) MGI PMID:9784490 NCBI chr13:118,851,199...118,928,651
Ensembl chr13:118,806,327...118,928,651 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within IMP (PMID:9435295)
(PMID:10518547)		 MGI PMID:9435295 PMID:10518547 NCBI chr 7:129,764,181...129,868,538
Ensembl chr 7:129,764,181...132,725,079 		JBrowse link
G Plxna2 plexin A2 involved_in IEP (PMID:19666519) BHF-UCL PMID:19666519 NCBI chr 1:194,302,020...194,499,177
Ensembl chr 1:194,300,526...194,499,177 		JBrowse link
G Sema3c sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C involved_in IEP (PMID:19666519) BHF-UCL PMID:19666519 NCBI chr 5:17,779,814...17,935,266
Ensembl chr 5:17,779,279...17,935,266 		JBrowse link
G Shh sonic hedgehog acts_upstream_of_or_within IMP (PMID:11118883) MGI PMID:11118883 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
G Sox9 SRY (sex determining region Y)-box 9 involved_in IEP (PMID:20940257) UniProt PMID:20940257 NCBI chr11:112,673,036...112,678,583
Ensembl chr11:112,673,050...112,678,586 		JBrowse link
G Wnt3 wingless-type MMTV integration site family, member 3 involved_in ISO
IEA		 GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr11:103,665,000...103,708,854
Ensembl chr11:103,664,976...103,708,783 		JBrowse link
G Zfp219 zinc finger protein 219 involved_in IEP (PMID:20940257) UniProt PMID:20940257 NCBI chr14:52,243,532...52,258,597
Ensembl chr14:52,243,534...52,258,190 		JBrowse link
limb joint morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col3a1 collagen, type III, alpha 1 involved_in IMP (PMID:31655293) MGI PMID:31655293 NCBI chr 1:45,350,698...45,388,866
Ensembl chr 1:45,350,698...45,388,866 		JBrowse link
G Col6a1 collagen, type VI, alpha 1 acts_upstream_of_or_within IMP (PMID:22448243) MGI PMID:22448243 NCBI chr10:76,544,626...76,561,869
Ensembl chr10:76,544,626...76,562,002 		JBrowse link
G Errfi1 ERBB receptor feedback inhibitor 1 acts_upstream_of_or_within IMP (PMID:24550287) MGI PMID:24550287 NCBI chr 4:150,938,253...150,953,346
Ensembl chr 4:150,938,376...150,953,349 		JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within IMP (PMID:20404326) MGI PMID:20404326 NCBI chr15:52,931,657...53,209,579
Ensembl chr15:52,927,434...53,209,555 		JBrowse link
G Sulf1 sulfatase 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr 1:12,762,421...12,946,090
Ensembl chr 1:12,762,501...12,931,416 		JBrowse link
post-embryonic forelimb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atrx ATRX, chromatin remodeler acts_upstream_of_or_within IMP (PMID:24386478) MGI PMID:24386478 NCBI chr  X:104,841,221...104,972,978
Ensembl chr  X:104,841,221...104,973,009 		JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in IMP (PMID:24770645) MGI PMID:24770645 NCBI chr10:24,513,812...24,588,057
Ensembl chr10:24,513,812...24,588,057 		JBrowse link
G Vps54 VPS54 GARP complex subunit involved_in IMP (PMID:11403940) MGI PMID:11403940 NCBI chr11:21,189,032...21,271,133
Ensembl chr11:21,189,281...21,271,136 		JBrowse link
post-embryonic hindlimb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Large1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within IDA (PMID:24722207) MGI PMID:24722207 NCBI chr 8:73,541,227...74,080,164
Ensembl chr 8:73,541,227...74,080,168 		JBrowse link
G Mir23a microRNA 23a acts_upstream_of_or_within IDA (PMID:24101522) MGI PMID:24101522 NCBI chr 8:84,935,147...84,935,221
Ensembl chr 8:84,935,147...84,935,221 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28640
    developmental process 7547
      anatomical structure morphogenesis 3117
        appendage morphogenesis 184
          limb morphogenesis 184
            embryonic limb morphogenesis + 148
            forelimb morphogenesis + 47
            hindlimb morphogenesis + 50
            limb bud formation + 10
            limb joint morphogenesis + 8
            post-embryonic limb morphogenesis + 5
Path 2
Term Annotations click to browse term
  biological_process 28640
    developmental process 7547
      anatomical structure development 7011
        multicellular organism development 5580
          appendage development 225
            appendage morphogenesis 184
              limb morphogenesis 184
                embryonic limb morphogenesis + 148
                forelimb morphogenesis + 47
                hindlimb morphogenesis + 50
                limb bud formation + 10
                limb joint morphogenesis + 8
                post-embryonic limb morphogenesis + 5
paths to the root