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ONTOLOGY REPORT - ANNOTATIONS

Term:limb morphogenesis
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Accession:GO:0035108 term browser browse the term
Definition:The process in which the anatomical structures of a limb are generated and organized. A limb is a paired appendage of a tetrapod used for locomotion or grasping.
Synonyms:narrow_synonym: limb bud morphogenesis

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limb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALX4 ALX homeobox 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9847249)
(PMID:9374397), (PMID:9847249)		 Ensembl
MGI		 PMID:9374397 PMID:9847249 GO_REF:0000107 NCBI chr 1:21,051,413...21,099,159
Ensembl chr 1:21,051,580...21,097,605 		JBrowse link
G ASPH aspartate beta-hydroxylase acts_upstream_of_or_within ISO (PMID:11773073) MGI PMID:11773073 NCBI chr 8:57,378,019...57,599,812
Ensembl chr 8:57,375,894...57,565,259 		JBrowse link
G BAK1 BCL2 antagonist/killer 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11163212) Ensembl
MGI		 PMID:11163212 GO_REF:0000107 NCBI chr17:38,492,776...38,502,534
Ensembl chr17:38,492,858...38,501,281 		JBrowse link
G BAX BCL2 associated X, apoptosis regulator acts_upstream_of_or_within ISO (PMID:11163212) MGI PMID:11163212 NCBI chr 6:42,186,028...42,193,105 JBrowse link
G BAX BCL2 associated X, apoptosis regulator involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 6:42,186,238...42,194,115 JBrowse link
G CIBAR1 CBY1 interacting BAR domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:88,670,290...88,700,834
Ensembl chr 8:88,670,298...88,699,883 		JBrowse link
G COL2A1 collagen type II alpha 1 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10100048) Ensembl
MGI		 PMID:10100048 GO_REF:0000107 NCBI chr11:44,196,213...44,227,718
Ensembl chr11:44,196,094...44,227,468 		JBrowse link
G EVX2 even-skipped homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8978698) Ensembl
MGI		 PMID:8978698 GO_REF:0000107 NCBI chr10:61,650,763...61,659,724
Ensembl chr10:61,654,829...61,658,494 		JBrowse link
G FBN2 fibrillin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10700192) Ensembl
MGI		 PMID:10700192 GO_REF:0000107 NCBI chr23:31,204,652...31,476,677
Ensembl chr23:31,204,391...31,475,820 		JBrowse link
G FGF10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9916808) Ensembl
MGI		 PMID:9916808 GO_REF:0000107 NCBI chr 4:43,080,387...43,163,355
Ensembl chr 4:43,081,831...43,163,432 		JBrowse link
G FGF8 fibroblast growth factor 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15328019) Ensembl
MGI		 PMID:15328019 GO_REF:0000107 NCBI chr 9:94,797,157...94,803,725
Ensembl chr 9:94,798,088...94,803,629 		JBrowse link
G FLVCR1 FLVCR choline and heme transporter 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18258918) Ensembl
MGI		 PMID:18258918 GO_REF:0000107 NCBI chr25:16,656,219...16,688,397
Ensembl chr25:16,652,246...16,688,376 		JBrowse link
G GLI3 GLI family zinc finger 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9268572) Ensembl
MGI		 PMID:9268572 GO_REF:0000107 NCBI chr21:16,386,700...16,665,648
Ensembl chr21:16,549,789...16,662,238 		JBrowse link
G HOXD13 homeobox D13 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11543619)
(PMID:8978698)		 Ensembl
MGI		 PMID:8978698 PMID:11543619 GO_REF:0000107 NCBI chr10:61,662,670...61,670,955
Ensembl chr10:61,667,880...61,669,743 		JBrowse link
G IDUA alpha-L-iduronidase acts_upstream_of_or_within ISO (PMID:9097952) MGI PMID:9097952 NCBI chr27:47,778,220...47,794,435
Ensembl chr27:47,778,335...47,794,352 		JBrowse link
G IFT140 intraflagellar transport 140 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:24009529) MGI
Ensembl		 PMID:24009529 GO_REF:0000107 NCBI chr 5:1,419,432...1,523,342
Ensembl chr 5:1,415,664...1,521,843 		JBrowse link
G IQCE IQ motif containing E involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:18,963,871...19,014,509
Ensembl chr28:18,963,944...19,019,009 		JBrowse link
G LMX1B LIM homeobox transcription factor 1 beta acts_upstream_of_or_within ISO (PMID:20589901) MGI PMID:20589901 NCBI chr12:11,443,253...11,526,789
Ensembl chr12:11,444,324...11,526,552 		JBrowse link
G LOC103219825 protein patched homolog 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:107,580,895...107,656,443
Ensembl chr12:107,590,663...107,652,985 		JBrowse link
G LRP5 LDL receptor related protein 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15537447) Ensembl
MGI		 PMID:15537447 GO_REF:0000107 NCBI chr 1:6,090,048...6,224,956
Ensembl chr 1:6,089,930...6,190,383 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:15469977)
(PMID:15537447)		 MGI PMID:15469977 PMID:15537447 NCBI chr11:12,016,542...12,170,496
Ensembl chr11:12,021,560...12,170,663 		JBrowse link
G MEGF8 multiple EGF like domains 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:36,529,848...36,580,213
Ensembl chr 6:36,530,014...36,582,525 		JBrowse link
G NFIA nuclear factor I A involved_in ISO (PMID:29247144) MGI PMID:29247144 NCBI chr20:71,573,729...72,171,268 JBrowse link
G NPR2 natriuretic peptide receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:44,795,822...44,844,464
Ensembl chr12:44,793,253...44,813,671 		JBrowse link
G PCNT pericentrin acts_upstream_of_or_within ISO (PMID:20096683) MGI PMID:20096683 NCBI chr 2:89,934,888...90,046,767
Ensembl chr 2:89,936,210...90,046,328 		JBrowse link
G PCSK5 proprotein convertase subtilisin/kexin type 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:86,907,173...87,367,935
Ensembl chr12:87,042,557...87,367,033 		JBrowse link
G PKDCC protein kinase domain containing, cytoplasmic acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:21553379) MGI
Ensembl		 PMID:21553379 GO_REF:0000107 NCBI chr14:65,203,757...65,214,386
Ensembl chr14:65,204,620...65,214,190 		JBrowse link
G PRICKLE1 prickle planar cell polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:38,696,771...38,819,324
Ensembl chr11:38,694,602...38,718,519 		JBrowse link
G RPGRIP1L RPGRIP1 like acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:17558409) MGI
Ensembl		 PMID:17558409 GO_REF:0000107 NCBI chr 5:39,388,632...39,487,223
Ensembl chr 5:39,387,107...39,487,092 		JBrowse link
G SIK3 SIK family kinase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22318228) Ensembl
MGI		 PMID:22318228 GO_REF:0000107 NCBI chr 1:108,209,204...108,471,102
Ensembl chr 1:108,208,921...108,470,983 		JBrowse link
G TBX3 T-box transcription factor 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:12668638) MGI
Ensembl		 PMID:12668638 GO_REF:0000107 NCBI chr11:109,952,100...109,966,328
Ensembl chr11:109,952,054...109,965,065 		JBrowse link
G TBX4 T-box transcription factor 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:15621531) MGI
Ensembl		 PMID:15621531 GO_REF:0000107 NCBI chr16:32,677,878...32,715,169
Ensembl chr16:32,683,921...32,711,674 		JBrowse link
G VPS54 VPS54 subunit of GARP complex involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:43,000,960...43,127,129
Ensembl chr14:43,008,915...43,125,850 		JBrowse link
G WNT5A Wnt family member 5A acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:19795512) MGI
Ensembl		 PMID:19795512 GO_REF:0000107 NCBI chr22:16,809,454...16,836,815
Ensembl chr22:16,809,451...16,825,048 		JBrowse link
G ZIC3 Zic family member 3 involved_in ISO (PMID:22234993) MGI PMID:22234993 NCBI chr  X:112,597,329...112,609,411
Ensembl chr  X:112,598,466...112,601,803 		JBrowse link
apoptotic process involved in embryonic digit morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BAX BCL2 associated X, apoptosis regulator acts_upstream_of_or_within ISO (PMID:15967824) MGI PMID:15967824 NCBI chr 6:42,186,028...42,193,105 JBrowse link
G BAX BCL2 associated X, apoptosis regulator involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 6:42,186,238...42,194,115 JBrowse link
G BCL2L11 BCL2 like 11 acts_upstream_of_or_within ISO (PMID:15967824) MGI PMID:15967824 NCBI chr14:14,178,159...14,205,337 JBrowse link
G NOTCH1 notch receptor 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:16245338) MGI
Ensembl		 PMID:16245338 GO_REF:0000107 NCBI chr12:1,656,815...1,707,566
Ensembl chr12:1,656,918...1,709,585 		JBrowse link
embryonic digit morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALX4 ALX homeobox 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9272948)
(PMID:9268572)		 Ensembl
MGI		 PMID:9268572 PMID:9272948 GO_REF:0000107 NCBI chr 1:21,051,413...21,099,159
Ensembl chr 1:21,051,580...21,097,605 		JBrowse link
G B9D1 B9 domain containing 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:22179047) MGI
Ensembl		 PMID:22179047 GO_REF:0000107 NCBI chr16:17,925,741...17,945,879
Ensembl chr16:17,925,134...17,945,878 		JBrowse link
G BMP4 bone morphogenetic protein 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:9268572) MGI
Ensembl		 PMID:9268572 GO_REF:0000107 NCBI chr24:31,097,673...31,104,774
Ensembl chr24:31,097,538...31,101,225 		JBrowse link
G BMPR1A bone morphogenetic protein receptor type 1A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20043884) Ensembl
MGI		 PMID:20043884 GO_REF:0000107 NCBI chr 9:44,944,463...45,108,832
Ensembl chr 9:44,941,460...45,027,275 		JBrowse link
G BPNT2 3'(2'), 5'-bisphosphate nucleotidase 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:18539921) MGI
Ensembl		 PMID:18539921 GO_REF:0000107 NCBI chr 8:52,962,686...52,999,006
Ensembl chr 8:52,968,532...52,998,996 		JBrowse link
G C2CD3 C2 domain containing 3 centriole elongation regulator acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:19004860) MGI
Ensembl		 PMID:19004860 GO_REF:0000107 NCBI chr 1:65,282,311...65,436,007
Ensembl chr 1:65,282,318...65,435,834 		JBrowse link
G CHST11 carbohydrate sulfotransferase 11 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:16079159) MGI
Ensembl		 PMID:16079159 GO_REF:0000107 NCBI chr11:99,662,890...99,982,276
Ensembl chr11:99,665,290...99,981,977 		JBrowse link
G CPLANE1 ciliogenesis and planar polarity effector complex subunit 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:25877302) MGI
Ensembl		 PMID:25877302 GO_REF:0000107 NCBI chr 4:35,981,299...36,131,575
Ensembl chr 4:35,979,110...36,130,565 		JBrowse link
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20043884)
(PMID:12923052)		 Ensembl
MGI		 PMID:12923052 PMID:20043884 GO_REF:0000107 NCBI chr22:2,679,488...2,725,034
Ensembl chr22:2,684,022...2,723,949 		JBrowse link
G ECE1 endothelin converting enzyme 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:111,212,567...111,342,755
Ensembl chr20:111,212,594...111,342,821 		JBrowse link
G FBXW4 F-box and WD repeat domain containing 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9733575)
(PMID:10471509)		 Ensembl
MGI		 PMID:9733575 PMID:10471509 GO_REF:0000107 NCBI chr 9:94,634,721...94,722,156
Ensembl chr 9:94,635,347...94,721,439 		JBrowse link
G FLVCR1 FLVCR choline and heme transporter 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18258918) Ensembl
MGI		 PMID:18258918 GO_REF:0000107 NCBI chr25:16,656,219...16,688,397
Ensembl chr25:16,652,246...16,688,376 		JBrowse link
G FREM2 FRAS1 related extracellular matrix 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:26234751) MGI
Ensembl		 PMID:26234751 GO_REF:0000107 NCBI chr 3:17,121,063...17,310,149
Ensembl chr 3:17,129,126...17,300,363 		JBrowse link
G FUZ fuzzy planar cell polarity protein acts_upstream_of_or_within ISO (PMID:19877275)
(PMID:27158779)		 MGI PMID:19877275 PMID:27158779 NCBI chr 6:42,968,715...42,975,374
Ensembl chr 6:42,969,000...42,975,368 		JBrowse link
G GAS1 growth arrest specific 1 acts_upstream_of_or_within ISO (PMID:17504940), (PMID:17504941) MGI PMID:17504940 PMID:17504941 NCBI chr12:97,590,381...97,593,209
Ensembl chr12:97,591,762...97,592,805 		JBrowse link
G GJA1 gap junction protein alpha 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19439426) Ensembl
MGI		 PMID:19439426 GO_REF:0000107 NCBI chr13:52,397,291...52,410,341
Ensembl chr13:52,396,109...52,410,339 		JBrowse link
G GLI2 GLI family zinc finger 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:19056373) MGI
Ensembl		 PMID:19056373 GO_REF:0000107 NCBI chr10:9,302,890...9,561,287
Ensembl chr10:9,304,645...9,369,115 		JBrowse link
G GLI3 GLI family zinc finger 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9268572)
(PMID:22841643)
(PMID:16254602), (PMID:19036983), (PMID:9268572)
(PMID:17714700)		 Ensembl
MGI		 PMID:9268572 PMID:16254602 PMID:17714700 PMID:19036983 PMID:22841643 GO_REF:0000107 NCBI chr21:16,386,700...16,665,648
Ensembl chr21:16,549,789...16,662,238 		JBrowse link
G GNA12 G protein subunit alpha 12 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12077299) Ensembl
MGI		 PMID:12077299 GO_REF:0000107 NCBI chr28:18,778,768...18,890,420
Ensembl chr28:18,778,847...18,888,922 		JBrowse link
G GNAQ G protein subunit alpha q acts_upstream_of_or_within ISO (PMID:12077299) MGI PMID:12077299 NCBI chr12:88,666,375...88,988,989
Ensembl chr12:88,670,424...88,871,154 		JBrowse link
G GRHL2 grainyhead like transcription factor 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:21377456) MGI
Ensembl		 PMID:21377456 GO_REF:0000107 NCBI chr 8:96,340,459...96,526,366
Ensembl chr 8:96,342,189...96,526,363 		JBrowse link
G HAND2 heart and neural crest derivatives expressed 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12070084) Ensembl
MGI		 PMID:12070084 GO_REF:0000107 NCBI chr 7:119,635,697...119,639,415
Ensembl chr 7:119,634,741...119,638,546 		JBrowse link
G HDAC1 histone deacetylase 1 involved_in ISO (PMID:21093383) BHF-UCL PMID:21093383 NCBI chr20:100,529,782...100,575,953
Ensembl chr20:100,530,369...100,558,556 		JBrowse link
G HDAC2 histone deacetylase 2 involved_in ISO (PMID:21093383) BHF-UCL PMID:21093383 NCBI chr13:59,873,248...59,904,542
Ensembl chr13:59,873,767...59,905,742 		JBrowse link
G HOXA11 homeobox A11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12869760) Ensembl
MGI		 PMID:12869760 GO_REF:0000107 NCBI chr21:31,180,232...31,187,709
Ensembl chr21:31,183,682...31,186,010 		JBrowse link
G HOXC11 homeobox C11 involved_in IEA Ensembl GO_REF:0000107
G HOXD11 homeobox D11 acts_upstream_of_or_within ISO (PMID:8900279)
(PMID:12869760)
(PMID:17714700)		 MGI PMID:8900279 PMID:12869760 PMID:17714700 NCBI chr10:61,681,474...61,693,974
Ensembl chr10:61,682,400...61,684,168 		JBrowse link
G HOXD12 homeobox D12 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8900279)
(PMID:17714700)		 Ensembl
MGI		 PMID:8900279 PMID:17714700 GO_REF:0000107 NCBI chr10:61,674,853...61,679,412
Ensembl chr10:61,674,864...61,675,819 		JBrowse link
G HOXD13 homeobox D13 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17714700)
(PMID:8900279)
(PMID:9342042)		 Ensembl
MGI		 PMID:8900279 PMID:9342042 PMID:17714700 GO_REF:0000107 NCBI chr10:61,662,670...61,670,955
Ensembl chr10:61,667,880...61,669,743 		JBrowse link
G IFT122 intraflagellar transport 122 acts_upstream_of_or_within ISO (PMID:15755804) MGI PMID:15755804 NCBI chr22:51,528,383...51,616,757
Ensembl chr22:51,528,254...51,616,682 		JBrowse link
G IFT140 intraflagellar transport 140 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:23469164) MGI
Ensembl		 PMID:23469164 GO_REF:0000107 NCBI chr 5:1,419,432...1,523,342
Ensembl chr 5:1,415,664...1,521,843 		JBrowse link
G IFT52 intraflagellar transport 52 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15930098) Ensembl
MGI		 PMID:15930098 GO_REF:0000107 NCBI chr 2:20,154,246...20,211,754
Ensembl chr 2:20,152,036...20,211,682 		JBrowse link
G IFT88 intraflagellar transport 88 acts_upstream_of_or_within ISO (PMID:12701101), (PMID:16254602)
(PMID:15755804), (PMID:15930098)
(PMID:19036983)
(PMID:15930098)		 MGI PMID:12701101 PMID:15755804 PMID:15930098 PMID:16254602 PMID:19036983 NCBI chr 3:435,649...546,661
Ensembl chr 3:436,207...546,583 		JBrowse link
G IHH Indian hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20660756) Ensembl
MGI		 PMID:20660756 GO_REF:0000107 NCBI chr10:104,960,296...104,966,596
Ensembl chr10:104,960,120...104,966,585 		JBrowse link
G INTU inturned planar cell polarity protein acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:25774014) MGI
Ensembl		 PMID:25774014 GO_REF:0000107 NCBI chr 7:74,749,929...74,844,078
Ensembl chr 7:74,759,929...74,843,989 		JBrowse link
G LMBR1 limb development membrane protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11606546) Ensembl
MGI		 PMID:11606546 GO_REF:0000107 NCBI chr21:124,819,580...125,032,058
Ensembl chr21:124,819,887...124,981,008 		JBrowse link
G LNPK lunapark, ER junction formation factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9342042) Ensembl
MGI		 PMID:9342042 GO_REF:0000107 NCBI chr10:61,498,749...61,575,166
Ensembl chr10:61,499,617...61,574,794 		JBrowse link
G LOC103233314 transmembrane protein 231 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:22179047) MGI
Ensembl		 PMID:22179047 GO_REF:0000107 NCBI chr 5:61,023,700...61,043,183
Ensembl chr 5:61,025,388...61,042,792 		JBrowse link
G LOC103238414 uncharacterized LOC103238414 acts_upstream_of_or_within ISO (PMID:12869760) MGI PMID:12869760 NCBI chr11:50,076,648...50,087,084
Ensembl chr11:50,083,893...50,086,060 		JBrowse link
G LRP4 LDL receptor related protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16517118) Ensembl
MGI		 PMID:16517118 GO_REF:0000107 NCBI chr 1:18,393,489...18,474,514
Ensembl chr 1:18,413,513...18,471,444 		JBrowse link
G LRP5 LDL receptor related protein 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15142971) Ensembl
MGI		 PMID:15142971 GO_REF:0000107 NCBI chr 1:6,090,048...6,224,956
Ensembl chr 1:6,089,930...6,190,383 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:19795512)
(PMID:15142971)		 MGI PMID:15142971 PMID:19795512 NCBI chr11:12,016,542...12,170,496
Ensembl chr11:12,021,560...12,170,663 		JBrowse link
G MAP3K20 mitogen-activated protein kinase kinase kinase 20 involved_in ISO (PMID:26755636) UniProt PMID:26755636 NCBI chr10:58,573,303...58,764,759 JBrowse link
G MEGF8 multiple EGF like domains 8 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:32203821) MGI
Ensembl		 PMID:32203821 GO_REF:0000107 NCBI chr 6:36,529,848...36,580,213
Ensembl chr 6:36,530,014...36,582,525 		JBrowse link
G MKS1 MKS transition zone complex subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23454480)
(PMID:21045211)
(PMID:19776033)		 Ensembl
MGI		 PMID:19776033 PMID:21045211 PMID:23454480 GO_REF:0000107 NCBI chr16:35,182,276...35,196,167
Ensembl chr16:35,182,568...35,199,858 		JBrowse link
G MSX1 msh homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21465616) Ensembl
MGI		 PMID:21465616 GO_REF:0000107 NCBI chr27:41,028,763...41,032,676
Ensembl chr27:41,028,919...41,033,006 		JBrowse link
G MSX2 msh homeobox 2 acts_upstream_of_or_within ISO (PMID:21465616) MGI PMID:21465616 NCBI chr23:76,873,499...76,879,935
Ensembl chr23:76,873,669...76,879,553 		JBrowse link
G MYCN MYCN proto-oncogene, bHLH transcription factor acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:17360777) MGI
Ensembl		 PMID:17360777 GO_REF:0000107 NCBI chr14:91,685,376...91,692,091 JBrowse link
G NOG noggin involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:36,816,783...36,818,693
Ensembl chr16:36,817,476...36,818,174 		JBrowse link
G OSR1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:88,364,115...88,371,258
Ensembl chr14:88,364,166...88,371,263 		JBrowse link
G OSR2 odd-skipped related transciption factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:93,831,218...93,839,098
Ensembl chr 8:93,831,480...93,839,263 		JBrowse link
G PRICKLE1 prickle planar cell polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:38,696,771...38,819,324
Ensembl chr11:38,694,602...38,718,519 		JBrowse link
G RAB23 RAB23, member RAS oncogene family acts_upstream_of_or_within ISO (PMID:15755804), (PMID:9636176) MGI PMID:9636176 PMID:15755804 NCBI chr17:14,383,064...14,418,144
Ensembl chr17:14,383,155...14,414,698 		JBrowse link
G ROR2 receptor tyrosine kinase like orphan receptor 2 acts_upstream_of_or_within ISO (PMID:20660756) MGI PMID:20660756 NCBI chr12:102,172,288...102,397,297 JBrowse link
G SALL1 spalt like transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:36,928,711...36,944,158
Ensembl chr 5:36,927,990...36,943,630 		JBrowse link
G SFRP2 secreted frizzled related protein 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:18729207) MGI
Ensembl		 PMID:18729207 GO_REF:0000107 NCBI chr 7:100,336,442...100,345,093
Ensembl chr 7:100,336,119...100,345,086 		JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20660756)
(PMID:15930098)
(PMID:17504940), (PMID:17504941)		 Ensembl
MGI		 PMID:15930098 PMID:17504940 PMID:17504941 PMID:20660756 GO_REF:0000107 NCBI chr21:123,929,937...123,942,451
Ensembl chr21:123,932,900...123,942,395 		JBrowse link
G SMAD4 SMAD family member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:29,894,157...29,951,445
Ensembl chr18:29,897,621...29,934,478 		JBrowse link
G TBC1D32 TBC1 domain family member 32 acts_upstream_of_or_within ISO (PMID:20159594) MGI PMID:20159594 NCBI chr13:52,518,428...52,742,961 JBrowse link
G TBC1D32 TBC1 domain family member 32 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr13:52,519,851...52,668,754 JBrowse link
G TBX2 T-box transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:32,627,296...32,636,797
Ensembl chr16:32,627,819...32,636,880 		JBrowse link
G TBX3 T-box transcription factor 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:23844108) MGI
Ensembl		 PMID:23844108 GO_REF:0000107 NCBI chr11:109,952,100...109,966,328
Ensembl chr11:109,952,054...109,965,065 		JBrowse link
G TMEM107 transmembrane protein 107 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:7,554,771...7,558,413
Ensembl chr16:7,555,009...7,557,085 		JBrowse link
G TRAF3IP1 TRAF3 interacting protein 1 acts_upstream_of_or_within ISO (PMID:21945076) MGI PMID:21945076 NCBI chr10:124,348,763...124,428,522
Ensembl chr10:124,348,916...124,429,716 		JBrowse link
G TTBK2 tau tubulin kinase 2 acts_upstream_of_or_within ISO (PMID:23141541) MGI PMID:23141541 NCBI chr26:40,048,802...40,228,083
Ensembl chr26:40,048,943...40,231,228 		JBrowse link
G TULP3 TUB like protein 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:19286674), (PMID:19334287) MGI
Ensembl		 PMID:19286674 PMID:19334287 GO_REF:0000107 NCBI chr11:2,956,762...3,005,309
Ensembl chr11:2,956,895...3,006,735 		JBrowse link
G TWIST1 twist family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15030764) Ensembl
MGI		 PMID:15030764 GO_REF:0000107 NCBI chr21:39,040,178...39,042,384
Ensembl chr21:39,040,547...39,041,146 		JBrowse link
G WDPCP WD repeat containing planar cell polarity effector acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:24302887) MGI
Ensembl		 PMID:24302887 GO_REF:0000107 NCBI chr14:43,425,405...43,896,015
Ensembl chr14:43,526,525...43,898,300 		JBrowse link
G WNT5A Wnt family member 5A acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:19795512) MGI
Ensembl		 PMID:19795512 GO_REF:0000107 NCBI chr22:16,809,454...16,836,815
Ensembl chr22:16,809,451...16,825,048 		JBrowse link
G WNT7A Wnt family member 7A involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:49,805,415...49,863,115
Ensembl chr22:49,805,463...49,862,830 		JBrowse link
G ZBTB16 zinc finger and BTB domain containing 16 ISO RGD PMID:19191224 RGD:2312786 NCBI chr 1:105,446,067...105,648,771
Ensembl chr 1:105,449,994...105,643,344 		JBrowse link
embryonic forelimb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1A2 aldehyde dehydrogenase 1 family member A2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:15069081), (PMID:20034106) MGI
Ensembl		 PMID:15069081 PMID:20034106 GO_REF:0000107 NCBI chr26:25,439,159...25,557,199
Ensembl chr26:25,439,360...25,557,202 		JBrowse link
G ALX3 ALX homeobox 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:11641221) MGI
Ensembl		 PMID:11641221 GO_REF:0000107 NCBI chr20:23,471,651...23,482,317
Ensembl chr20:23,471,736...23,481,543 		JBrowse link
G ALX4 ALX homeobox 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11641221) Ensembl
MGI		 PMID:11641221 GO_REF:0000107 NCBI chr 1:21,051,413...21,099,159
Ensembl chr 1:21,051,580...21,097,605 		JBrowse link
G CACNA1C calcium voltage-gated channel subunit alpha1 C involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:2,107,722...2,753,970
Ensembl chr11:2,508,705...2,752,991 		JBrowse link
G CRABP2 cellular retinoic acid binding protein 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:7720575) MGI
Ensembl		 PMID:7720575 GO_REF:0000107 NCBI chr20:7,159,022...7,164,586
Ensembl chr20:7,159,238...7,164,163 		JBrowse link
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15371327) Ensembl
MGI		 PMID:15371327 GO_REF:0000107 NCBI chr22:2,679,488...2,725,034
Ensembl chr22:2,684,022...2,723,949 		JBrowse link
G EN1 engrailed homeobox 1 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr10:11,475,221...11,479,475 JBrowse link
G HOXA11 homeobox A11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22916278) Ensembl
MGI		 PMID:22916278 GO_REF:0000107 NCBI chr21:31,180,232...31,187,709
Ensembl chr21:31,183,682...31,186,010 		JBrowse link
G HOXA13 homeobox A13 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15733672) Ensembl
MGI		 PMID:15733672 GO_REF:0000107 NCBI chr21:31,168,239...31,175,960
Ensembl chr21:31,168,793...31,173,056 		JBrowse link
G HOXA9 homeobox A9 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:8625797) MGI
Ensembl		 PMID:8625797 GO_REF:0000107 NCBI chr21:31,199,573...31,206,455
Ensembl chr21:31,203,422...31,206,433 		JBrowse link
G HOXD11 homeobox D11 acts_upstream_of_or_within ISO (PMID:22916278) MGI PMID:22916278 NCBI chr10:61,681,474...61,693,974
Ensembl chr10:61,682,400...61,684,168 		JBrowse link
G HOXD9 homeobox D9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8625797) Ensembl
MGI		 PMID:8625797 GO_REF:0000107 NCBI chr10:61,695,065...61,699,936
Ensembl chr10:61,697,271...61,699,933 		JBrowse link
G IFT122 intraflagellar transport 122 involved_in ISO (PMID:21209331) BHF-UCL PMID:21209331 NCBI chr22:51,528,383...51,616,757
Ensembl chr22:51,528,254...51,616,682 		JBrowse link
G LNPK lunapark, ER junction formation factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22916278)
(PMID:9342042)		 Ensembl
MGI		 PMID:9342042 PMID:22916278 GO_REF:0000107 NCBI chr10:61,498,749...61,575,166
Ensembl chr10:61,499,617...61,574,794 		JBrowse link
G LOC103216935 uncharacterized LOC103216935 acts_upstream_of_or_within ISO (PMID:9362463) MGI PMID:9362463 NCBI chr10:11,470,295...11,558,688
Ensembl chr10:11,475,221...11,479,475 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:15880584)
(PMID:18256198)
(PMID:19653321)
(PMID:11029008)		 MGI PMID:11029008 PMID:15880584 PMID:18256198 PMID:19653321 NCBI chr11:12,016,542...12,170,496
Ensembl chr11:12,021,560...12,170,663 		JBrowse link
G MECOM MDS1 and EVI1 complex locus acts_upstream_of_or_within ISO (PMID:17029558) MGI PMID:17029558 NCBI chr15:19,726,423...20,320,832
Ensembl chr15:20,256,384...20,320,834 		JBrowse link
G MSX1 msh homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21465616) Ensembl
MGI		 PMID:21465616 GO_REF:0000107 NCBI chr27:41,028,763...41,032,676
Ensembl chr27:41,028,919...41,033,006 		JBrowse link
G MSX2 msh homeobox 2 acts_upstream_of_or_within ISO (PMID:21465616) MGI PMID:21465616 NCBI chr23:76,873,499...76,879,935
Ensembl chr23:76,873,669...76,879,553 		JBrowse link
G NIPBL NIPBL cohesin loading factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:35,748,112...35,940,075
Ensembl chr 4:35,829,386...35,941,271 		JBrowse link
G OSR1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:88,364,115...88,371,258
Ensembl chr14:88,364,166...88,371,263 		JBrowse link
G OSR2 odd-skipped related transciption factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:93,831,218...93,839,098
Ensembl chr 8:93,831,480...93,839,263 		JBrowse link
G RDH10 retinol dehydrogenase 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17473173) Ensembl
MGI		 PMID:17473173 GO_REF:0000107 NCBI chr 8:68,903,665...68,933,536
Ensembl chr 8:68,904,352...68,933,792 		JBrowse link
G RECK reversion inducing cysteine rich protein with kazal motifs acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:23213437) MGI
Ensembl		 PMID:23213437 GO_REF:0000107 NCBI chr12:44,431,807...44,517,893
Ensembl chr12:44,431,615...44,517,810 		JBrowse link
G RPGRIP1L RPGRIP1 like acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:17553904) MGI
Ensembl		 PMID:17553904 GO_REF:0000107 NCBI chr 5:39,388,632...39,487,223
Ensembl chr 5:39,387,107...39,487,092 		JBrowse link
G RSPO2 R-spondin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18256198) Ensembl
MGI		 PMID:18256198 GO_REF:0000107 NCBI chr 8:102,632,060...102,804,181
Ensembl chr 8:102,632,060...102,801,911 		JBrowse link
G RUNX2 RUNX family transcription factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22916278) Ensembl
MGI		 PMID:22916278 GO_REF:0000107 NCBI chr17:26,679,386...26,807,812
Ensembl chr17:26,683,175...26,807,319 		JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11118883), (PMID:11476582) Ensembl
MGI		 PMID:11118883 PMID:11476582 GO_REF:0000107 NCBI chr21:123,929,937...123,942,451
Ensembl chr21:123,932,900...123,942,395 		JBrowse link
G SHOX2 SHOX homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22916278) Ensembl
MGI		 PMID:22916278 GO_REF:0000107 NCBI chr15:32,684,598...32,694,640
Ensembl chr15:32,684,705...32,692,699 		JBrowse link
G TBX3 T-box transcription factor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:109,952,100...109,966,328
Ensembl chr11:109,952,054...109,965,065 		JBrowse link
G TBX5 T-box transcription factor 5 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:11572777), (PMID:12490567) MGI
Ensembl		 PMID:11572777 PMID:12490567 GO_REF:0000107 NCBI chr11:109,638,694...109,696,619
Ensembl chr11:109,638,715...109,689,177 		JBrowse link
G TFAP2A transcription factor AP-2 alpha involved_in ISO (PMID:9811866) UniProt PMID:9811866 NCBI chr17:61,750,757...61,769,041 JBrowse link
G TP63 tumor protein p63 acts_upstream_of_or_within ISO (PMID:25503409) MGI PMID:25503409 NCBI chr15:83,861,489...84,126,675 JBrowse link
G TP63 tumor protein p63 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr15:84,093,957...84,123,905 JBrowse link
G TWIST1 twist family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12175489) Ensembl
MGI		 PMID:12175489 GO_REF:0000107 NCBI chr21:39,040,178...39,042,384
Ensembl chr21:39,040,547...39,041,146 		JBrowse link
G WNT3 Wnt family member 3 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr16:60,473,029...60,484,673 JBrowse link
G WNT7A Wnt family member 7A acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:9362463)
(PMID:15880584)		 MGI
Ensembl		 PMID:9362463 PMID:15880584 GO_REF:0000107 MGI:48652 NCBI chr22:49,805,415...49,863,115
Ensembl chr22:49,805,463...49,862,830 		JBrowse link
G WNT9A Wnt family member 9A acts_upstream_of_or_within ISO (PMID:15371327) MGI PMID:15371327 NCBI chr25:1,759,047...1,787,510
Ensembl chr25:1,781,826...1,788,663 		JBrowse link
embryonic hindlimb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AFF3 ALF transcription elongation factor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:3,268,751...3,880,415
Ensembl chr14:3,270,636...3,573,300 		JBrowse link
G ALX3 ALX homeobox 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:11641221) MGI
Ensembl		 PMID:11641221 GO_REF:0000107 NCBI chr20:23,471,651...23,482,317
Ensembl chr20:23,471,736...23,481,543 		JBrowse link
G ALX4 ALX homeobox 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11641221) Ensembl
MGI		 PMID:11641221 GO_REF:0000107 NCBI chr 1:21,051,413...21,099,159
Ensembl chr 1:21,051,580...21,097,605 		JBrowse link
G BMP4 bone morphogenetic protein 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:10964473) MGI
Ensembl		 PMID:10964473 GO_REF:0000107 NCBI chr24:31,097,673...31,104,774
Ensembl chr24:31,097,538...31,101,225 		JBrowse link
G CHD7 chromodomain helicase DNA binding protein 7 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:16207732) MGI
Ensembl		 PMID:16207732 GO_REF:0000107 NCBI chr 8:56,654,939...56,782,803
Ensembl chr 8:56,657,826...56,785,804 		JBrowse link
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12923052)
(PMID:18231602)		 Ensembl
MGI		 PMID:12923052 PMID:18231602 GO_REF:0000107 NCBI chr22:2,679,488...2,725,034
Ensembl chr22:2,684,022...2,723,949 		JBrowse link
G DICER1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (PMID:16319892) MGI PMID:16319892 NCBI chr24:72,915,550...72,986,658
Ensembl chr24:72,915,499...72,963,006 		JBrowse link
G FGF4 fibroblast growth factor 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16245339) Ensembl
MGI		 PMID:16245339 GO_REF:0000107 NCBI chr 1:4,786,296...4,791,441
Ensembl chr 1:4,789,203...4,791,036 		JBrowse link
G FGF8 fibroblast growth factor 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16245339) Ensembl
MGI		 PMID:16245339 GO_REF:0000107 NCBI chr 9:94,797,157...94,803,725
Ensembl chr 9:94,798,088...94,803,629 		JBrowse link
G GPC3 glypican 3 acts_upstream_of_or_within ISO (PMID:10964473) MGI PMID:10964473 NCBI chr  X:108,688,706...109,143,653 JBrowse link
G LOC103243509 neuroendocrine secretory protein 55 acts_upstream_of_or_within ISO (PMID:15797856) MGI PMID:15797856 NCBI chr 2:5,233,893...5,303,433
Ensembl chr 2:5,233,874...5,249,192 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:18256198)
(PMID:15880584)
(PMID:19653321)		 MGI PMID:15880584 PMID:18256198 PMID:19653321 NCBI chr11:12,016,542...12,170,496
Ensembl chr11:12,021,560...12,170,663 		JBrowse link
G MECOM MDS1 and EVI1 complex locus acts_upstream_of_or_within ISO (PMID:17029558) MGI PMID:17029558 NCBI chr15:19,726,423...20,320,832
Ensembl chr15:20,256,384...20,320,834 		JBrowse link
G MED1 mediator complex subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14500757) Ensembl
MGI		 PMID:14500757 GO_REF:0000107 NCBI chr16:66,719,393...66,764,902
Ensembl chr16:66,719,423...66,762,896 		JBrowse link
G MMP13 matrix metallopeptidase 13 ISO RGD PMID:11850435 RGD:1582550 NCBI chr 1:94,322,473...94,370,665
Ensembl chr 1:94,322,979...94,334,747 		JBrowse link
G MSX1 msh homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21465616) Ensembl
MGI		 PMID:21465616 GO_REF:0000107 NCBI chr27:41,028,763...41,032,676
Ensembl chr27:41,028,919...41,033,006 		JBrowse link
G MSX2 msh homeobox 2 acts_upstream_of_or_within ISO (PMID:21465616) MGI PMID:21465616 NCBI chr23:76,873,499...76,879,935
Ensembl chr23:76,873,669...76,879,553 		JBrowse link
G NOTCH1 notch receptor 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:16245338) MGI
Ensembl		 PMID:16245338 GO_REF:0000107 NCBI chr12:1,656,815...1,707,566
Ensembl chr12:1,656,918...1,709,585 		JBrowse link
G OSR1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:88,364,115...88,371,258
Ensembl chr14:88,364,166...88,371,263 		JBrowse link
G OSR2 odd-skipped related transciption factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:93,831,218...93,839,098
Ensembl chr 8:93,831,480...93,839,263 		JBrowse link
G PITX1 paired like homeodomain 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18231602) Ensembl
MGI		 PMID:18231602 GO_REF:0000107 NCBI chr23:37,807,486...37,820,540
Ensembl chr23:37,807,378...37,813,948 		JBrowse link
G PITX2 paired like homeodomain 2 acts_upstream_of_or_within ISO (PMID:18231602) MGI PMID:18231602 NCBI chr 7:58,501,669...58,526,413
Ensembl chr 7:58,501,559...58,507,318 		JBrowse link
G RARB retinoic acid receptor beta acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:10075839) MGI
Ensembl		 PMID:10075839 GO_REF:0000107 NCBI chr15:69,851,447...70,266,215
Ensembl chr15:70,096,117...70,264,905 		JBrowse link
G RARG retinoic acid receptor gamma acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:10075839) MGI
Ensembl		 PMID:10075839 GO_REF:0000107 NCBI chr11:49,319,104...49,340,725
Ensembl chr11:49,319,839...49,328,656 		JBrowse link
G RPGRIP1L RPGRIP1 like acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:17553904) MGI
Ensembl		 PMID:17553904 GO_REF:0000107 NCBI chr 5:39,388,632...39,487,223
Ensembl chr 5:39,387,107...39,487,092 		JBrowse link
G RSPO2 R-spondin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18256198) Ensembl
MGI		 PMID:18256198 GO_REF:0000107 NCBI chr 8:102,632,060...102,804,181
Ensembl chr 8:102,632,060...102,801,911 		JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11118883) Ensembl
MGI		 PMID:11118883 GO_REF:0000107 NCBI chr21:123,929,937...123,942,451
Ensembl chr21:123,932,900...123,942,395 		JBrowse link
G SMARCA4 SWI/SNF related BAF chromatin remodeling complex subunit ATPase 4 acts_upstream_of_or_within ISO (PMID:16192310) MGI PMID:16192310 NCBI chr 6:9,943,162...10,044,476 JBrowse link
G TBX3 T-box transcription factor 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:23844108) MGI
Ensembl		 PMID:23844108 GO_REF:0000107 NCBI chr11:109,952,100...109,966,328
Ensembl chr11:109,952,054...109,965,065 		JBrowse link
G TBX4 T-box transcription factor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:32,677,878...32,715,169
Ensembl chr16:32,683,921...32,711,674 		JBrowse link
G TP63 tumor protein p63 acts_upstream_of_or_within ISO (PMID:25503409) MGI PMID:25503409 NCBI chr15:83,861,489...84,126,675 JBrowse link
G TP63 tumor protein p63 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr15:84,093,957...84,123,905 JBrowse link
G TWIST1 twist family bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:39,040,178...39,042,384
Ensembl chr21:39,040,547...39,041,146 		JBrowse link
G WNT3 Wnt family member 3 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr16:60,473,029...60,484,673 JBrowse link
G WNT7A Wnt family member 7A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15880584) Ensembl
MGI		 PMID:15880584 GO_REF:0000107 NCBI chr22:49,805,415...49,863,115
Ensembl chr22:49,805,463...49,862,830 		JBrowse link
G ZBTB16 zinc finger and BTB domain containing 16 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:10835630) RGD
MGI
Ensembl		 PMID:10835630 PMID:19191224 GO_REF:0000107 RGD:2312786 NCBI chr 1:105,446,067...105,648,771
Ensembl chr 1:105,449,994...105,643,344 		JBrowse link
embryonic limb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACD ACD shelterin complex subunit and telomerase recruitment factor acts_upstream_of_or_within ISO (PMID:15537664) MGI PMID:15537664 NCBI chr 5:59,783,842...59,787,117
Ensembl chr 5:59,784,178...59,787,032 		JBrowse link
G ALDH1A2 aldehyde dehydrogenase 1 family member A2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:14623241) MGI
Ensembl		 PMID:14623241 GO_REF:0000107 NCBI chr26:25,439,159...25,557,199
Ensembl chr26:25,439,360...25,557,202 		JBrowse link
G ALX1 ALX homeobox 1 acts_upstream_of_or_within ISO (PMID:9847249) MGI PMID:9847249 NCBI chr11:80,687,799...80,717,886
Ensembl chr11:80,696,271...80,717,574 		JBrowse link
G BMP4 bone morphogenetic protein 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:9664686) MGI
Ensembl		 PMID:9664686 GO_REF:0000107 NCBI chr24:31,097,673...31,104,774
Ensembl chr24:31,097,538...31,101,225 		JBrowse link
G BMP7 bone morphogenetic protein 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9664686) Ensembl
MGI		 PMID:9664686 GO_REF:0000107 NCBI chr 2:6,856,396...6,954,948
Ensembl chr 2:6,856,453...6,954,944 		JBrowse link
G C2CD3 C2 domain containing 3 centriole elongation regulator acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:19004860) MGI
Ensembl		 PMID:19004860 GO_REF:0000107 NCBI chr 1:65,282,311...65,436,007
Ensembl chr 1:65,282,318...65,435,834 		JBrowse link
G CHST11 carbohydrate sulfotransferase 11 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:16079159) MGI
Ensembl		 PMID:16079159 GO_REF:0000107 NCBI chr11:99,662,890...99,982,276
Ensembl chr11:99,665,290...99,981,977 		JBrowse link
G CYP26B1 cytochrome P450 family 26 subfamily B member 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:15030763) MGI
Ensembl		 PMID:15030763 GO_REF:0000107 NCBI chr14:35,030,011...35,057,164
Ensembl chr14:35,038,654...35,057,176 		JBrowse link
G DICER1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (PMID:16040801) MGI PMID:16040801 NCBI chr24:72,915,550...72,986,658
Ensembl chr24:72,915,499...72,963,006 		JBrowse link
G DKK1 dickkopf WNT signaling pathway inhibitor 1 acts_upstream_of_or_within ISO (PMID:15242796) MGI PMID:15242796 NCBI chr 9:78,836,803...78,840,158
Ensembl chr 9:78,835,162...78,840,146 		JBrowse link
G DLX5 distal-less homeobox 5 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr21:52,036,401...52,040,903 JBrowse link
G DLX6 distal-less homeobox 6 acts_upstream_of_or_within ISO (PMID:12112878)
(PMID:18326838)		 MGI PMID:12112878 PMID:18326838 NCBI chr21:52,050,201...52,055,868 JBrowse link
G DLX6 distal-less homeobox 6 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr21:52,050,206...52,054,985 JBrowse link
G DYNC2H1 dynein cytoplasmic 2 heavy chain 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16229832) Ensembl
MGI		 PMID:16229832 GO_REF:0000107 NCBI chr 1:94,484,090...94,849,960
Ensembl chr 1:94,484,512...94,849,581 		JBrowse link
G EN1 engrailed homeobox 1 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr10:11,475,221...11,479,475 JBrowse link
G FBN2 fibrillin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11350121)
(PMID:11285249)		 Ensembl
MGI		 PMID:11285249 PMID:11350121 GO_REF:0000107 NCBI chr23:31,204,652...31,476,677
Ensembl chr23:31,204,391...31,475,820 		JBrowse link
G FGF4 fibroblast growth factor 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15328019) Ensembl
MGI		 PMID:15328019 GO_REF:0000107 NCBI chr 1:4,786,296...4,791,441
Ensembl chr 1:4,789,203...4,791,036 		JBrowse link
G FGF9 fibroblast growth factor 9 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:17576930) MGI
Ensembl		 PMID:17576930 GO_REF:0000107 NCBI chr 3:1,779,126...1,811,427
Ensembl chr 3:1,779,192...1,812,784 		JBrowse link
G FGFR1 fibroblast growth factor receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16207751) Ensembl
MGI		 PMID:16207751 GO_REF:0000107 NCBI chr 8:36,426,116...36,485,683
Ensembl chr 8:36,427,110...36,485,508 		JBrowse link
G FRAS1 Fraser extracellular matrix complex subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23469164) Ensembl
MGI		 PMID:23469164 GO_REF:0000107 NCBI chr 7:26,545,048...26,992,346
Ensembl chr 7:26,700,869...26,954,352 		JBrowse link
G GDF5 growth differentiation factor 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15542031) Ensembl
MGI		 PMID:15542031 GO_REF:0000107 NCBI chr 2:56,340,371...56,346,378
Ensembl chr 2:56,340,933...56,345,053 		JBrowse link
G GJA5 gap junction protein alpha 5 acts_upstream_of_or_within ISO (PMID:15923624) MGI PMID:15923624
G GLI3 GLI family zinc finger 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12142027), (PMID:12435361), (PMID:12435627), (PMID:19809516), (PMID:8387379)
(PMID:16284117)
(PMID:19422820)		 Ensembl
MGI		 PMID:8387379 PMID:12142027 PMID:12435361 PMID:12435627 PMID:16284117 More... GO_REF:0000107 NCBI chr21:16,386,700...16,665,648
Ensembl chr21:16,549,789...16,662,238 		JBrowse link
G GREM1 gremlin 1, DAN family BMP antagonist acts_upstream_of_or_within ISO (PMID:12808456) MGI PMID:12808456 NCBI chr26:50,152,097...50,169,760 JBrowse link
G GREM1 gremlin 1, DAN family BMP antagonist involved_in IEA Ensembl GO_REF:0000107 Ensembl chr26:50,155,496...50,156,047 JBrowse link
G HNF1A HNF1 homeobox A acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:10090727) MGI
Ensembl		 PMID:10090727 GO_REF:0000107 NCBI chr11:116,334,935...116,358,582
Ensembl chr11:116,335,675...116,357,751 		JBrowse link
G HOXA10 homeobox A10 acts_upstream_of_or_within ISO (PMID:12869760) MGI PMID:12869760 NCBI chr21:31,189,240...31,198,244 JBrowse link
G HOXA11 homeobox A11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14668414) Ensembl
MGI		 PMID:14668414 GO_REF:0000107 NCBI chr21:31,180,232...31,187,709
Ensembl chr21:31,183,682...31,186,010 		JBrowse link
G HOXC10 homeobox C10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12869760) Ensembl
MGI		 PMID:12869760 GO_REF:0000107 NCBI chr11:50,092,230...50,100,934
Ensembl chr11:50,095,810...50,100,940 		JBrowse link
G HOXD10 homeobox D10 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:12869760) MGI
Ensembl		 PMID:12869760 GO_REF:0000107 NCBI chr10:61,686,868...61,694,965
Ensembl chr10:61,691,797...61,694,415 		JBrowse link
G HOXD11 homeobox D11 acts_upstream_of_or_within ISO (PMID:14668414) MGI PMID:14668414 NCBI chr10:61,681,474...61,693,974
Ensembl chr10:61,682,400...61,684,168 		JBrowse link
G HOXD13 homeobox D13 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11850178) Ensembl
MGI		 PMID:11850178 GO_REF:0000107 NCBI chr10:61,662,670...61,670,955
Ensembl chr10:61,667,880...61,669,743 		JBrowse link
G LEF1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:10090727) MGI
Ensembl		 PMID:10090727 GO_REF:0000107 NCBI chr 7:55,974,770...56,096,214
Ensembl chr 7:55,990,621...56,094,110 		JBrowse link
G LOC103216935 uncharacterized LOC103216935 acts_upstream_of_or_within
involved_in		 ISO (PMID:15242796)
(PMID:7624797)
(PMID:8684466)		 MGI
ParkinsonsUK-UCL		 PMID:7624797 PMID:8684466 PMID:15242796 NCBI chr10:11,470,295...11,558,688
Ensembl chr10:11,475,221...11,479,475 		JBrowse link
G LOC103219825 protein patched homolog 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:11389830)
(PMID:11784021)		 MGI
Ensembl		 PMID:11389830 PMID:11784021 GO_REF:0000107 NCBI chr12:107,580,895...107,656,443
Ensembl chr12:107,590,663...107,652,985 		JBrowse link
G LOC103226510 uncharacterized LOC103226510 acts_upstream_of_or_within ISO (PMID:18326838)
(PMID:12112878)		 MGI PMID:12112878 PMID:18326838 NCBI chr21:52,032,933...52,092,791
Ensembl chr21:52,036,401...52,040,903 		JBrowse link
G LRP4 LDL receptor related protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16207730)
(PMID:17119023)		 Ensembl
MGI		 PMID:16207730 PMID:17119023 GO_REF:0000107 NCBI chr 1:18,393,489...18,474,514
Ensembl chr 1:18,413,513...18,471,444 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:20359476) MGI PMID:20359476 NCBI chr11:12,016,542...12,170,496
Ensembl chr11:12,021,560...12,170,663 		JBrowse link
G MBNL1 muscleblind like splicing regulator 1 involved_in ISO (PMID:12915312) UniProt PMID:12915312 NCBI chr15:38,208,694...38,427,867
Ensembl chr15:38,208,038...38,375,273 		JBrowse link
G MEGF8 multiple EGF like domains 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:36,529,848...36,580,213
Ensembl chr 6:36,530,014...36,582,525 		JBrowse link
G MOSMO modulator of smoothened acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:34486668) MGI
Ensembl		 PMID:34486668 GO_REF:0000107 NCBI chr 5:19,679,299...19,760,484
Ensembl chr 5:19,679,317...19,758,166 		JBrowse link
G MSX1 msh homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15930102)
(PMID:19422820)		 Ensembl
MGI		 PMID:15930102 PMID:19422820 GO_REF:0000107 NCBI chr27:41,028,763...41,032,676
Ensembl chr27:41,028,919...41,033,006 		JBrowse link
G MSX2 msh homeobox 2 acts_upstream_of_or_within ISO (PMID:15930102)
(PMID:19422820)		 MGI PMID:15930102 PMID:19422820 NCBI chr23:76,873,499...76,879,935
Ensembl chr23:76,873,669...76,879,553 		JBrowse link
G MUSTN1 musculoskeletal, embryonic nuclear protein 1 ISO RGD PMID:14718386 RGD:1302424 NCBI chr22:14,215,968...14,219,524 JBrowse link
G NOTCH1 notch receptor 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:16169548) MGI
Ensembl		 PMID:16169548 GO_REF:0000107 NCBI chr12:1,656,815...1,707,566
Ensembl chr12:1,656,918...1,709,585 		JBrowse link
G NOTCH2 notch receptor 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:16169548) MGI
Ensembl		 PMID:16169548 GO_REF:0000107 NCBI chr20:13,712,140...13,871,777
Ensembl chr20:13,712,292...13,871,784 		JBrowse link
G PBX1 PBX homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16672333) Ensembl
MGI		 PMID:16672333 GO_REF:0000107 NCBI chr25:63,990,553...64,317,901
Ensembl chr25:63,989,612...64,084,673 		JBrowse link
G PBX2 PBX homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16672333) Ensembl
MGI		 PMID:16672333 GO_REF:0000107 NCBI chr17:39,841,798...39,847,244
Ensembl chr17:39,842,064...39,845,618 		JBrowse link
G PRICKLE1 prickle planar cell polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:38,696,771...38,819,324
Ensembl chr11:38,694,602...38,718,519 		JBrowse link
G PRRX1 paired related homeobox 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:9729491), (PMID:9882503) MGI
Ensembl		 PMID:9729491 PMID:9882503 GO_REF:0000107 NCBI chr25:58,347,686...58,423,454
Ensembl chr25:58,347,704...58,421,980 		JBrowse link
G PRRX2 paired related homeobox 2 acts_upstream_of_or_within ISO (PMID:9729491), (PMID:9882503) MGI PMID:9729491 PMID:9882503 NCBI chr12:8,424,415...8,447,959
Ensembl chr12:8,424,737...8,480,393 		JBrowse link
G PSEN1 presenilin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16169548) Ensembl
MGI		 PMID:16169548 GO_REF:0000107 NCBI chr24:50,394,310...50,476,521
Ensembl chr24:50,405,590...50,472,132 		JBrowse link
G PSEN2 presenilin 2 acts_upstream_of_or_within ISO (PMID:16169548) MGI PMID:16169548 NCBI chr25:2,862,354...2,888,735
Ensembl chr25:2,862,251...2,877,386 		JBrowse link
G SALL4 spalt like transcription factor 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16380715) Ensembl
MGI		 PMID:16380715 GO_REF:0000107 NCBI chr 2:12,179,721...12,199,629
Ensembl chr 2:12,182,357...12,199,321 		JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15315763)
(PMID:19422820)
(PMID:11389830)		 Ensembl
MGI		 PMID:11389830 PMID:15315763 PMID:19422820 GO_REF:0000107 NCBI chr21:123,929,937...123,942,451
Ensembl chr21:123,932,900...123,942,395 		JBrowse link
G SHOX2 SHOX homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17481601)
(PMID:16537395)		 Ensembl
MGI		 PMID:16537395 PMID:17481601 GO_REF:0000107 NCBI chr15:32,684,598...32,694,640
Ensembl chr15:32,684,705...32,692,699 		JBrowse link
G SKI SKI proto-oncogene acts_upstream_of_or_within ISO (PMID:12435627) MGI PMID:12435627 NCBI chr20:129,243,033...129,324,162
Ensembl chr20:129,242,445...129,324,138 		JBrowse link
G SP8 Sp8 transcription factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14597661) Ensembl
MGI		 PMID:14597661 GO_REF:0000107 NCBI chr21:37,453,667...37,467,434
Ensembl chr21:37,462,097...37,464,588 		JBrowse link
G SP9 Sp9 transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:59,842,869...59,852,780
Ensembl chr10:59,849,326...59,851,818 		JBrowse link
G TBX4 T-box transcription factor 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:12736212) MGI
Ensembl		 PMID:12736212 GO_REF:0000107 NCBI chr16:32,677,878...32,715,169
Ensembl chr16:32,683,921...32,711,674 		JBrowse link
G TBX5 T-box transcription factor 5 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:12736217)
(PMID:16380715)		 MGI
Ensembl		 PMID:12736217 PMID:16380715 GO_REF:0000107 NCBI chr11:109,638,694...109,696,619
Ensembl chr11:109,638,715...109,689,177 		JBrowse link
G TGFB2 transforming growth factor beta 2 involved_in ISO (PMID:9217007) BHF-UCL PMID:9217007 NCBI chr25:11,163,651...11,259,868
Ensembl chr25:11,163,100...11,258,470 		JBrowse link
G TP63 tumor protein p63 acts_upstream_of_or_within ISO (PMID:10227293)
(PMID:18326838)		 MGI PMID:10227293 PMID:18326838 NCBI chr15:83,861,489...84,126,675 JBrowse link
G TP63 tumor protein p63 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr15:84,093,957...84,123,905 JBrowse link
G TWIST1 twist family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15030764)
(PMID:12142027)
(PMID:11350121)		 Ensembl
MGI		 PMID:11350121 PMID:12142027 PMID:15030764 GO_REF:0000107 NCBI chr21:39,040,178...39,042,384
Ensembl chr21:39,040,547...39,041,146 		JBrowse link
G WDR19 WD repeat domain 19 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22228095) Ensembl
MGI		 PMID:22228095 GO_REF:0000107 NCBI chr27:11,019,897...11,113,760
Ensembl chr27:11,018,827...11,113,666 		JBrowse link
G WNT5A Wnt family member 5A acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:10021340) MGI
Ensembl		 PMID:10021340 GO_REF:0000107 NCBI chr22:16,809,454...16,836,815
Ensembl chr22:16,809,451...16,825,048 		JBrowse link
G WNT7A Wnt family member 7A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15242796) Ensembl
MGI		 PMID:15242796 GO_REF:0000107 NCBI chr22:49,805,415...49,863,115
Ensembl chr22:49,805,463...49,862,830 		JBrowse link
G ZBTB16 zinc finger and BTB domain containing 16 acts_upstream_of_or_within ISO MGI MGI:61278 NCBI chr 1:105,446,067...105,648,771
Ensembl chr 1:105,449,994...105,643,344 		JBrowse link
embryonic nail plate morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FZD6 frizzled class receptor 6 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:23439395) MGI
Ensembl		 PMID:23439395 GO_REF:0000107 NCBI chr 8:98,154,173...98,187,864
Ensembl chr 8:98,154,196...98,188,069 		JBrowse link
G MSX1 msh homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21465616) Ensembl
MGI		 PMID:21465616 GO_REF:0000107 NCBI chr27:41,028,763...41,032,676
Ensembl chr27:41,028,919...41,033,006 		JBrowse link
G MSX2 msh homeobox 2 acts_upstream_of_or_within ISO (PMID:21465616) MGI PMID:21465616 NCBI chr23:76,873,499...76,879,935
Ensembl chr23:76,873,669...76,879,553 		JBrowse link
G PRICKLE1 prickle planar cell polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:38,696,771...38,819,324
Ensembl chr11:38,694,602...38,718,519 		JBrowse link
embryonic skeletal limb joint morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTNNB1 catenin beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:2,679,488...2,725,034
Ensembl chr22:2,684,022...2,723,949 		JBrowse link
G OSR1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:88,364,115...88,371,258
Ensembl chr14:88,364,166...88,371,263 		JBrowse link
G OSR2 odd-skipped related transciption factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:93,831,218...93,839,098
Ensembl chr 8:93,831,480...93,839,263 		JBrowse link
forelimb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARK2C arkadia (RNF111) C-terminal like ring finger ubiquitin ligase 2C involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23610558) Ensembl
MGI		 PMID:23610558 GO_REF:0000107 NCBI chr18:34,446,996...34,573,186
Ensembl chr18:34,451,095...34,474,080 		JBrowse link
G FMN1 formin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17554679) Ensembl
MGI		 PMID:17554679 GO_REF:0000107 NCBI chr26:49,700,309...50,117,799
Ensembl chr26:49,734,553...49,996,405 		JBrowse link
G GDF5 growth differentiation factor 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8145850) Ensembl
MGI		 PMID:8145850 GO_REF:0000107 NCBI chr 2:56,340,371...56,346,378
Ensembl chr 2:56,340,933...56,345,053 		JBrowse link
G HOXD10 homeobox D10 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:10642795) MGI
Ensembl		 PMID:10642795 GO_REF:0000107 NCBI chr10:61,686,868...61,694,965
Ensembl chr10:61,691,797...61,694,415 		JBrowse link
G HOXD9 homeobox D9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10642795) Ensembl
MGI		 PMID:10642795 GO_REF:0000107 NCBI chr10:61,695,065...61,699,936
Ensembl chr10:61,697,271...61,699,933 		JBrowse link
G NIPBL NIPBL cohesin loading factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:35,748,112...35,940,075
Ensembl chr 4:35,829,386...35,941,271 		JBrowse link
G SALL1 spalt like transcription factor 1 acts_upstream_of_or_within ISO (PMID:19168674) MGI PMID:19168674 NCBI chr 5:36,928,711...36,944,158
Ensembl chr 5:36,927,990...36,943,630 		JBrowse link
G SALL3 spalt like transcription factor 3 acts_upstream_of_or_within ISO (PMID:19168674) MGI PMID:19168674 NCBI chr18:1,154,033...1,174,030
Ensembl chr18:1,156,502...1,173,946 		JBrowse link
G TBX3 T-box transcription factor 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:9207801) MGI
Ensembl		 PMID:9207801 GO_REF:0000107 NCBI chr11:109,952,100...109,966,328
Ensembl chr11:109,952,054...109,965,065 		JBrowse link
G TBX5 T-box transcription factor 5 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:8988164), (PMID:8988165)
(PMID:15621531)		 MGI
Ensembl		 PMID:8988164 PMID:8988165 PMID:15621531 GO_REF:0000107 NCBI chr11:109,638,694...109,696,619
Ensembl chr11:109,638,715...109,689,177 		JBrowse link
G TFAP2A transcription factor AP-2 alpha acts_upstream_of_or_within ISO (PMID:9811866) MGI PMID:9811866 NCBI chr17:61,750,757...61,769,041 JBrowse link
G TFAP2B transcription factor AP-2 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:21,599,570...21,629,757
Ensembl chr17:21,604,067...21,628,489 		JBrowse link
G WNT7A Wnt family member 7A acts_upstream_of_or_within ISO MGI MGI:48652 NCBI chr22:49,805,415...49,863,115
Ensembl chr22:49,805,463...49,862,830 		JBrowse link
G ZBTB16 zinc finger and BTB domain containing 16 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10835630) Ensembl
MGI		 PMID:10835630 GO_REF:0000107 NCBI chr 1:105,446,067...105,648,771
Ensembl chr 1:105,449,994...105,643,344 		JBrowse link
hindlimb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP7A ATPase copper transporting alpha acts_upstream_of_or_within ISO MGI MGI:61157 NCBI chr  X:66,843,519...66,985,655
Ensembl chr  X:66,843,558...66,985,709 		JBrowse link
G BMPR1A bone morphogenetic protein receptor type 1A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16556916) Ensembl
MGI		 PMID:16556916 GO_REF:0000107 NCBI chr 9:44,944,463...45,108,832
Ensembl chr 9:44,941,460...45,027,275 		JBrowse link
G FMN1 formin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17554679) Ensembl
MGI		 PMID:17554679 GO_REF:0000107 NCBI chr26:49,700,309...50,117,799
Ensembl chr26:49,734,553...49,996,405 		JBrowse link
G GDF5 growth differentiation factor 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17085896)
(PMID:8145850)		 Ensembl
MGI		 PMID:8145850 PMID:17085896 GO_REF:0000107 NCBI chr 2:56,340,371...56,346,378
Ensembl chr 2:56,340,933...56,345,053 		JBrowse link
G HOXD10 homeobox D10 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:10642795) MGI
Ensembl		 PMID:10642795 GO_REF:0000107 NCBI chr10:61,686,868...61,694,965
Ensembl chr10:61,691,797...61,694,415 		JBrowse link
G HOXD9 homeobox D9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10642795) Ensembl
MGI		 PMID:10642795 GO_REF:0000107 NCBI chr10:61,695,065...61,699,936
Ensembl chr10:61,697,271...61,699,933 		JBrowse link
G LOC103219825 protein patched homolog 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:9262482) MGI
Ensembl		 PMID:9262482 GO_REF:0000107 NCBI chr12:107,580,895...107,656,443
Ensembl chr12:107,590,663...107,652,985 		JBrowse link
G PITX1 paired like homeodomain 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15621531), (PMID:16989801)
(PMID:10049363)
(PMID:10101115)		 Ensembl
MGI		 PMID:10049363 PMID:10101115 PMID:15621531 PMID:16989801 GO_REF:0000107 NCBI chr23:37,807,486...37,820,540
Ensembl chr23:37,807,378...37,813,948 		JBrowse link
G SALL1 spalt like transcription factor 1 acts_upstream_of_or_within ISO (PMID:19168674) MGI PMID:19168674 NCBI chr 5:36,928,711...36,944,158
Ensembl chr 5:36,927,990...36,943,630 		JBrowse link
G SALL3 spalt like transcription factor 3 acts_upstream_of_or_within ISO (PMID:19168674) MGI PMID:19168674 NCBI chr18:1,154,033...1,174,030
Ensembl chr18:1,156,502...1,173,946 		JBrowse link
G TFAP2B transcription factor AP-2 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:21,599,570...21,629,757
Ensembl chr17:21,604,067...21,628,489 		JBrowse link
G TWIST1 twist family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10700192) Ensembl
MGI		 PMID:10700192 GO_REF:0000107 NCBI chr21:39,040,178...39,042,384
Ensembl chr21:39,040,547...39,041,146 		JBrowse link
G WNT7A Wnt family member 7A acts_upstream_of_or_within ISO MGI MGI:48652 NCBI chr22:49,805,415...49,863,115
Ensembl chr22:49,805,463...49,862,830 		JBrowse link
G ZBTB16 zinc finger and BTB domain containing 16 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10835630) Ensembl
MGI		 PMID:10835630 GO_REF:0000107 NCBI chr 1:105,446,067...105,648,771
Ensembl chr 1:105,449,994...105,643,344 		JBrowse link
limb bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COL2A1 collagen type II alpha 1 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:44,196,213...44,227,718
Ensembl chr11:44,196,094...44,227,468 		JBrowse link
G FGF10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9784490) Ensembl
MGI		 PMID:9784490 GO_REF:0000107 NCBI chr 4:43,080,387...43,163,355
Ensembl chr 4:43,081,831...43,163,432 		JBrowse link
G FGFR2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO (PMID:10518547)
(PMID:9435295)		 MGI PMID:9435295 PMID:10518547 NCBI chr 9:114,234,344...114,354,736
Ensembl chr 9:114,234,250...114,354,704 		JBrowse link
G PLXNA2 plexin A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:21,201,867...21,424,529
Ensembl chr25:21,202,014...21,419,521 		JBrowse link
G SEMA3C semaphorin 3C involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:67,974,074...68,154,383
Ensembl chr21:67,974,317...68,154,439 		JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11118883) Ensembl
MGI		 PMID:11118883 GO_REF:0000107 NCBI chr21:123,929,937...123,942,451
Ensembl chr21:123,932,900...123,942,395 		JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:49,519,749...49,523,967
Ensembl chr16:49,518,185...49,523,898 		JBrowse link
G WNT3 Wnt family member 3 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr16:60,473,029...60,484,673 JBrowse link
G ZNF219 zinc finger protein 219 involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:21,563,758...21,578,127
Ensembl chr29:21,564,213...21,567,247 		JBrowse link
limb joint morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COL3A1 collagen type III alpha 1 chain involved_in ISO (PMID:31655293) MGI PMID:31655293 NCBI chr10:74,455,133...74,493,392 JBrowse link
G COL6A1 collagen type VI alpha 1 chain acts_upstream_of_or_within ISO (PMID:22448243) MGI PMID:22448243 NCBI chr 2:89,608,525...89,649,823 JBrowse link
G ERRFI1 ERBB receptor feedback inhibitor 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:24550287) MGI
Ensembl		 PMID:24550287 GO_REF:0000107 NCBI chr20:123,738,971...123,753,575
Ensembl chr20:123,738,973...123,755,809 		JBrowse link
G EXT1 exostosin glycosyltransferase 1 acts_upstream_of_or_within ISO (PMID:20404326) MGI PMID:20404326 NCBI chr 8:112,435,733...112,751,301 JBrowse link
G EXT1 exostosin glycosyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 8:112,436,088...112,474,443 JBrowse link
post-embryonic forelimb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATRX ATRX chromatin remodeler acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:24386478) MGI
Ensembl		 PMID:24386478 GO_REF:0000107 NCBI chr  X:66,449,830...66,737,220
Ensembl chr  X:66,448,449...66,737,164 		JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:24770645) MGI PMID:24770645 NCBI chr13:41,670,416...41,755,549 JBrowse link
G VPS54 VPS54 subunit of GARP complex involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:43,000,960...43,127,129
Ensembl chr14:43,008,915...43,125,850 		JBrowse link
post-embryonic hindlimb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LARGE1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within ISO (PMID:24722207) MGI PMID:24722207 NCBI chr19:16,080,482...16,704,968
Ensembl chr19:16,080,430...16,549,495 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19822
    developmental process 6858
      anatomical structure morphogenesis 2923
        appendage morphogenesis 189
          limb morphogenesis 189
            embryonic limb morphogenesis + 154
            forelimb morphogenesis + 49
            hindlimb morphogenesis + 47
            limb bud formation + 9
            limb joint morphogenesis + 8
            post-embryonic limb morphogenesis + 4
Path 2
Term Annotations click to browse term
  biological_process 19822
    developmental process 6858
      anatomical structure development 6432
        multicellular organism development 5173
          appendage development 230
            appendage morphogenesis 189
              limb morphogenesis 189
                embryonic limb morphogenesis + 154
                forelimb morphogenesis + 49
                hindlimb morphogenesis + 47
                limb bud formation + 9
                limb joint morphogenesis + 8
                post-embryonic limb morphogenesis + 4
paths to the root