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ONTOLOGY REPORT - ANNOTATIONS


Term:appendage morphogenesis
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Accession:GO:0035107 term browser browse the term
Definition:The process in which the anatomical structures of appendages are generated and organized. An appendage is an organ or part that is attached to the trunk of an organism, such as a limb or a branch.



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apoptotic process involved in embryonic digit morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bax BCL2-associated X protein acts_upstream_of_or_within IGI (MGI:3581932|PMID:15967824) MGI PMID:15967824 MGI:3581932 NCBI chr 7:45,461,695...45,466,903
Ensembl chr 7:45,461,697...45,466,898
JBrowse link
G Bcl2l11 BCL2-like 11 (apoptosis facilitator) acts_upstream_of_or_within IGI (MGI:3581932|PMID:15967824) MGI PMID:15967824 MGI:3581932 NCBI chr 2:128,126,038...128,162,547
Ensembl chr 2:128,126,038...128,162,547
JBrowse link
G Notch1 notch 1 acts_upstream_of_or_within IMP (MGI:3608163|PMID:16245338) MGI PMID:16245338 MGI:3608163 NCBI chr 2:26,457,902...26,503,822
Ensembl chr 2:26,457,903...26,516,663
JBrowse link
embryonic digit morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alx4 aristaless-like homeobox 4 acts_upstream_of_or_within IMP
IGI
(MGI:1095762|PMID:9268572)
(MGI:1095777|PMID:9272948)
MGI PMID:9268572 PMID:9272948 MGI:1095762 MGI:1095777 NCBI chr 2:93,642,434...93,681,341
Ensembl chr 2:93,642,384...93,681,339
JBrowse link
G B9d1 B9 protein domain 1 acts_upstream_of_or_within IMP (MGI:5300833|PMID:22179047) MGI PMID:22179047 MGI:5300833 NCBI chr11:61,505,144...61,512,931
Ensembl chr11:61,505,144...61,512,931
JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within IGI (MGI:1095762|PMID:9268572) MGI PMID:9268572 MGI:1095762 NCBI chr14:46,383,525...46,390,669
Ensembl chr14:46,383,520...46,390,669
JBrowse link
G Bmpr1a bone morphogenetic protein receptor, type 1A acts_upstream_of_or_within IGI (MGI:4430000|PMID:20043884) MGI PMID:20043884 MGI:4430000 NCBI chr14:34,411,061...34,503,336
Ensembl chr14:34,410,734...34,503,341
JBrowse link
G Bpnt2 3'(2'), 5'-bisphosphate nucleotidase 2 acts_upstream_of_or_within IMP (MGI:3799383|PMID:18539921) MGI PMID:18539921 MGI:3799383 NCBI chr 4:4,762,484...4,793,306
Ensembl chr 4:4,762,484...4,793,355
JBrowse link
G C2cd3 C2 calcium-dependent domain containing 3 acts_upstream_of_or_within IMP (MGI:3821640|PMID:19004860) MGI PMID:19004860 MGI:3821640 NCBI chr 7:100,372,229...100,470,159
Ensembl chr 7:100,372,233...100,470,152
JBrowse link
G Chst11 carbohydrate sulfotransferase 11 acts_upstream_of_or_within IMP (MGI:3767479|PMID:16079159) MGI PMID:16079159 MGI:3767479 NCBI chr10:82,984,440...83,195,904
Ensembl chr10:82,985,498...83,195,900
JBrowse link
G Cplane1 ciliogenesis and planar polarity effector 1 acts_upstream_of_or_within IMP (MGI:5648689|PMID:25877302) MGI PMID:25877302 MGI:5648689 NCBI chr15:8,169,025...8,271,158
Ensembl chr15:8,169,106...8,271,158
JBrowse link
G Ctnnb1 catenin (cadherin associated protein), beta 1 acts_upstream_of_or_within IGI
IMP
(MGI:4430000|PMID:20043884)
(MGI:2670493|PMID:12923052)
MGI PMID:12923052 PMID:20043884 MGI:2670493 MGI:4430000 NCBI chr 9:120,933,400...120,960,507
Ensembl chr 9:120,929,216...120,960,507
JBrowse link
G Ece1 endothelin converting enzyme 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:137,862,237...137,965,229
Ensembl chr 4:137,862,237...137,965,229
JBrowse link
G Fbxw4 F-box and WD-40 domain protein 4 acts_upstream_of_or_within IMP (MGI:1344213|PMID:10471509)
(MGI:1278141|PMID:9733575)
MGI PMID:9733575 PMID:10471509 MGI:1278141 MGI:1344213 NCBI chr19:45,578,254...45,660,520
Ensembl chr19:45,578,254...45,660,312
JBrowse link
G Flvcr1 feline leukemia virus subgroup C cellular receptor 1 acts_upstream_of_or_within IMP (MGI:3775000|PMID:18258918) MGI PMID:18258918 MGI:3775000 NCBI chr 1:191,005,832...191,026,190
Ensembl chr 1:191,005,847...191,026,158
JBrowse link
G Frem2 Fras1 related extracellular matrix protein 2 acts_upstream_of_or_within IMP (MGI:5646594|PMID:26234751) MGI PMID:26234751 MGI:5646594 NCBI chr 3:53,513,938...53,658,593
Ensembl chr 3:53,513,938...53,657,355
JBrowse link
G Fuz fuzzy planar cell polarity protein acts_upstream_of_or_within IMP (MGI:5912570|PMID:27158779)
(MGI:4367921|PMID:19877275)
MGI PMID:19877275 PMID:27158779 MGI:4367921 MGI:5912570 NCBI chr 7:44,894,305...44,900,624
Ensembl chr 7:44,896,079...44,902,631
JBrowse link
G Gas1 growth arrest specific 1 acts_upstream_of_or_within IMP
IGI
(MGI:3710451|PMID:17504941), (MGI:3710452|PMID:17504940) MGI PMID:17504940 PMID:17504941 MGI:3710451 MGI:3710452 NCBI chr13:60,174,405...60,177,535
Ensembl chr13:60,174,405...60,177,365
JBrowse link
G Gja1 gap junction protein, alpha 1 acts_upstream_of_or_within IMP (MGI:3849919|PMID:19439426) MGI PMID:19439426 MGI:3849919 NCBI chr10:56,377,300...56,390,419
Ensembl chr10:56,377,330...56,402,513
JBrowse link
G Gli2 GLI-Kruppel family member GLI2 acts_upstream_of_or_within IMP (MGI:3833793|PMID:19056373) MGI PMID:19056373 MGI:3833793 NCBI chr 1:118,834,061...119,054,405
Ensembl chr 1:118,834,132...119,053,619
JBrowse link
G Gli3 GLI-Kruppel family member GLI3 acts_upstream_of_or_within IMP
IGI
(MGI:1095762|PMID:9268572), (MGI:3692156|PMID:16254602), (MGI:3821634|PMID:19036983)
(MGI:3765370|PMID:17714700)
(MGI:5439039|PMID:22841643)
MGI PMID:9268572 PMID:16254602 PMID:17714700 PMID:19036983 PMID:22841643 MGI:1095762 MGI:3692156 MGI:3765370 MGI:3821634 MGI:5439039 NCBI chr13:15,463,723...15,730,026
Ensembl chr13:15,463,235...15,730,026
JBrowse link
G Gna12 guanine nucleotide binding protein, alpha 12 acts_upstream_of_or_within IGI (MGI:2182490|PMID:12077299) MGI PMID:12077299 MGI:2182490 NCBI chr 5:140,759,944...140,830,431
Ensembl chr 5:140,758,408...140,830,431
JBrowse link
G Gnaq guanine nucleotide binding protein, alpha q polypeptide acts_upstream_of_or_within IGI (MGI:2182490|PMID:12077299) MGI PMID:12077299 MGI:2182490 NCBI chr19:16,132,684...16,388,520
Ensembl chr19:16,132,831...16,387,463
JBrowse link
G Grhl2 grainyhead like transcription factor 2 acts_upstream_of_or_within IMP (MGI:4943100|PMID:21377456) MGI PMID:21377456 MGI:4943100 NCBI chr15:37,232,821...37,363,569
Ensembl chr15:37,233,036...37,363,569
JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 acts_upstream_of_or_within IDA (MGI:2429440|PMID:12070084) MGI PMID:12070084 MGI:2429440 NCBI chr 8:57,320,983...57,324,517
Ensembl chr 8:57,320,983...57,324,633
JBrowse link
G Hdac1 histone deacetylase 1 involved_in IGI (MGI:4889029|PMID:21093383) BHF-UCL PMID:21093383 MGI:4889029 NCBI chr 4:129,516,104...129,542,646
Ensembl chr 4:129,516,104...129,542,713
JBrowse link
G Hdac2 histone deacetylase 2 involved_in IGI (MGI:4889029|PMID:21093383) BHF-UCL PMID:21093383 MGI:4889029 NCBI chr10:36,974,297...37,001,889
Ensembl chr10:36,974,544...37,001,889
JBrowse link
G Hoxa11 homeobox A11 acts_upstream_of_or_within IGI (MGI:2667742|PMID:12869760) MGI PMID:12869760 MGI:2667742 NCBI chr 6:52,242,105...52,245,810
Ensembl chr 6:52,242,106...52,245,810
JBrowse link
G Hoxc11 homeobox C11 acts_upstream_of_or_within IGI (MGI:2667742|PMID:12869760) MGI PMID:12869760 MGI:2667742 NCBI chr15:102,954,526...102,956,701
Ensembl chr15:102,954,427...102,957,708
JBrowse link
G Hoxd11 homeobox D11 acts_upstream_of_or_within IGI (MGI:3765370|PMID:17714700)
(MGI:2667742|PMID:12869760)
(MGI:83869|PMID:8900279)
MGI PMID:8900279 PMID:12869760 PMID:17714700 MGI:2667742 MGI:3765370 MGI:83869 NCBI chr 2:74,679,558...74,687,016
Ensembl chr 2:74,679,557...74,687,016
JBrowse link
G Hoxd12 homeobox D12 acts_upstream_of_or_within IGI (MGI:3765370|PMID:17714700)
(MGI:83869|PMID:8900279)
MGI PMID:8900279 PMID:17714700 MGI:3765370 MGI:83869 NCBI chr 2:74,675,013...74,677,705
Ensembl chr 2:74,675,013...74,677,705
JBrowse link
G Hoxd13 homeobox D13 acts_upstream_of_or_within IGI (MGI:1097490|PMID:9342042)
(MGI:83869|PMID:8900279)
(MGI:3765370|PMID:17714700)
MGI PMID:8900279 PMID:9342042 PMID:17714700 MGI:1097490 MGI:3765370 MGI:83869 NCBI chr 2:74,668,225...74,671,603
Ensembl chr 2:74,668,310...74,671,599
JBrowse link
G Ift122 intraflagellar transport 122 acts_upstream_of_or_within IMP (MGI:3577662|PMID:15755804) MGI PMID:15755804 MGI:3577662 NCBI chr 6:115,853,379...115,926,699
Ensembl chr 6:115,853,470...115,926,699
JBrowse link
G Ift140 intraflagellar transport 140 acts_upstream_of_or_within IMP (MGI:5505384|PMID:23469164) MGI PMID:23469164 MGI:5505384 NCBI chr17:25,016,083...25,099,499
Ensembl chr17:25,016,085...25,099,495
JBrowse link
G Ift52 intraflagellar transport 52 acts_upstream_of_or_within IMP (MGI:3579954|PMID:15930098) MGI PMID:15930098 MGI:3579954 NCBI chr 2:163,017,117...163,046,155
Ensembl chr 2:163,017,354...163,046,141
JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within IMP
IGI
(MGI:3821634|PMID:19036983)
(MGI:3579954|PMID:15930098)
(MGI:2660994|PMID:12701101), (MGI:3692156|PMID:16254602)
(MGI:3577662|PMID:15755804), (MGI:3579954|PMID:15930098)
MGI PMID:12701101 PMID:15755804 PMID:15930098 PMID:16254602 PMID:19036983 MGI:2660994 MGI:3577662 MGI:3579954 MGI:3692156 MGI:3821634 NCBI chr14:57,424,064...57,517,936
Ensembl chr14:57,424,062...57,517,936
JBrowse link
G Ihh Indian hedgehog acts_upstream_of_or_within
involved_in
IMP
IGI
ISO
(MGI:4822496|PMID:20660756) MGI PMID:20660756 GO_REF:0000096 MGI:4822496 MGI:4834177 NCBI chr 1:74,945,315...74,951,672
Ensembl chr 1:74,945,315...74,951,672
JBrowse link
G Intu inturned planar cell polarity protein acts_upstream_of_or_within
involved_in
IMP
ISO
(MGI:5644615|PMID:25774014) MGI PMID:25774014 GO_REF:0000096 MGI:4834177 MGI:5644615 NCBI chr 3:40,531,291...40,704,776
Ensembl chr 3:40,531,286...40,704,774
JBrowse link
G Lmbr1 limb region 1 acts_upstream_of_or_within IMP (MGI:2151954|PMID:11606546) MGI PMID:11606546 MGI:2151954 NCBI chr 5:29,229,802...29,378,421
Ensembl chr 5:29,229,802...29,378,390
JBrowse link
G Lnpk lunapark, ER junction formation factor acts_upstream_of_or_within IGI (MGI:1097490|PMID:9342042) MGI PMID:9342042 MGI:1097490 NCBI chr 2:74,514,836...74,579,458
Ensembl chr 2:74,520,291...74,579,435
JBrowse link
G Lrp4 low density lipoprotein receptor-related protein 4 acts_upstream_of_or_within IMP (MGI:3623169|PMID:16517118) MGI PMID:16517118 MGI:3623169 NCBI chr 2:91,457,456...91,513,901
Ensembl chr 2:91,457,511...91,513,779
JBrowse link
G Lrp5 low density lipoprotein receptor-related protein 5 acts_upstream_of_or_within IGI (MGI:3045836|PMID:15142971) MGI PMID:15142971 MGI:3045836 NCBI chr19:3,584,825...3,686,585
Ensembl chr19:3,584,828...3,686,564
JBrowse link
G Lrp6 low density lipoprotein receptor-related protein 6 acts_upstream_of_or_within IMP
IGI
(MGI:4413372|PMID:19795512)
(MGI:3045836|PMID:15142971)
MGI PMID:15142971 PMID:19795512 MGI:3045836 MGI:4413372 NCBI chr 6:134,446,476...134,566,913
Ensembl chr 6:134,446,476...134,566,965
JBrowse link
G Map3k20 mitogen-activated protein kinase kinase kinase 20 involved_in
acts_upstream_of_or_within
ISO
IMP
(MGI:5771618|PMID:26755636) MGI PMID:26755636 GO_REF:0000096 MGI:4834177 MGI:5771618 NCBI chr 2:72,285,637...72,442,610
Ensembl chr 2:72,285,637...72,442,610
JBrowse link
G Mks1 MKS transition zone complex subunit 1 acts_upstream_of_or_within IMP (MGI:4367169|PMID:19776033)
(MGI:4868517|PMID:21045211)
(MGI:5487695|PMID:23454480)
MGI PMID:19776033 PMID:21045211 PMID:23454480 MGI:4367169 MGI:4868517 MGI:5487695 NCBI chr11:87,853,182...87,863,803
Ensembl chr11:87,853,215...87,863,803
JBrowse link
G Msx1 msh homeobox 1 acts_upstream_of_or_within IGI (MGI:4948979|PMID:21465616) MGI PMID:21465616 MGI:4948979 NCBI chr 5:37,820,491...37,824,585
Ensembl chr 5:37,820,485...37,824,583
JBrowse link
G Msx2 msh homeobox 2 acts_upstream_of_or_within IGI (MGI:4948979|PMID:21465616) MGI PMID:21465616 MGI:4948979 NCBI chr13:53,466,881...53,472,780
Ensembl chr13:53,466,884...53,473,074
JBrowse link
G Mycn v-myc avian myelocytomatosis viral related oncogene, neuroblastoma derived acts_upstream_of_or_within IMP (MGI:3790402|PMID:17360777) MGI PMID:17360777 MGI:3790402 NCBI chr12:12,936,093...12,941,836
Ensembl chr12:12,936,093...12,941,914
JBrowse link
G Nog noggin involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:89,300,638...89,302,559
Ensembl chr11:89,300,638...89,302,332
JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in IGI (MGI:4950000|PMID:21262216) BHF-UCL PMID:21262216 MGI:4950000 NCBI chr12:9,574,442...9,581,500
Ensembl chr12:9,570,116...9,581,500
JBrowse link
G Osr2 odd-skipped related 2 involved_in IGI (MGI:4950000|PMID:21262216) BHF-UCL PMID:21262216 MGI:4950000 NCBI chr15:35,296,098...35,303,305
Ensembl chr15:35,296,098...35,303,305
JBrowse link
G Rab23 RAB23, member RAS oncogene family acts_upstream_of_or_within IMP (MGI:1267118|PMID:9636176), (MGI:3577662|PMID:15755804) MGI PMID:9636176 PMID:15755804 MGI:1267118 MGI:3577662 NCBI chr 1:33,719,896...33,742,564
Ensembl chr 1:33,719,887...33,742,564
JBrowse link
G Ror2 receptor tyrosine kinase-like orphan receptor 2 acts_upstream_of_or_within IGI
IMP
(MGI:4822496|PMID:20660756) MGI PMID:20660756 MGI:4822496 NCBI chr13:53,109,317...53,286,124
Ensembl chr13:53,109,312...53,286,124
JBrowse link
G Sall1 spalt like transcription factor 1 involved_in ISO
IMP
(MGI:4461128|PMID:18470945) MGI
UniProt
PMID:18470945 GO_REF:0000096 MGI:4461128 MGI:4834177 NCBI chr 8:89,027,242...89,044,162
Ensembl chr 8:89,027,235...89,044,162
JBrowse link
G Sfrp2 secreted frizzled-related protein 2 acts_upstream_of_or_within IMP (MGI:3806414|PMID:18729207) MGI PMID:18729207 MGI:3806414 NCBI chr 3:83,765,750...83,774,314
Ensembl chr 3:83,766,321...83,774,316
JBrowse link
G Shh sonic hedgehog involved_in
acts_upstream_of_or_within
IMP
IGI
(MGI:5559673|PMID:11044396)
(MGI:3039193|PMID:15075292), (MGI:4822496|PMID:20660756)
(MGI:3579954|PMID:15930098)
(MGI:3710451|PMID:17504941), (MGI:3710452|PMID:17504940)
Roslin_Institute
MGI
PMID:11044396 PMID:15075292 PMID:15930098 PMID:17504940 PMID:17504941 More... MGI:3039193 MGI:3579954 MGI:3710451 MGI:3710452 MGI:4822496 MGI:5559673 NCBI chr 5:28,456,840...28,467,101
Ensembl chr 5:28,456,815...28,467,256
JBrowse link
G Smad4 SMAD family member 4 involved_in IMP (MGI:5444318|PMID:23034633) CACAO PMID:23034633 MGI:5444318 NCBI chr18:73,634,790...73,703,791
Ensembl chr18:73,639,009...73,703,780
JBrowse link
G Tbc1d32 TBC1 domain family, member 32 acts_upstream_of_or_within IMP (MGI:4439200|PMID:20159594) MGI PMID:20159594 MGI:4439200 NCBI chr10:56,014,293...56,228,968
Ensembl chr10:56,014,293...56,228,689
JBrowse link
G Tbx2 T-box 2 involved_in IMP (MGI:3487212|PMID:15459098) BHF-UCL PMID:15459098 MGI:3487212 NCBI chr11:85,832,615...85,841,948
Ensembl chr11:85,832,551...85,841,948
JBrowse link
G Tbx3 T-box 3 acts_upstream_of_or_within
involved_in
IMP
ISO
(MGI:5532232|PMID:23844108) MGI PMID:23844108 GO_REF:0000096 MGI:4834177 MGI:5532232 NCBI chr 5:119,670,534...119,684,724
Ensembl chr 5:119,670,669...119,684,724
JBrowse link
G Tmem107 transmembrane protein 107 involved_in IMP (MGI:5432629|PMID:22698544) UniProt PMID:22698544 MGI:5432629 NCBI chr11:69,070,809...69,073,293
Ensembl chr11:69,070,806...69,073,293
JBrowse link
G Tmem231 transmembrane protein 231 acts_upstream_of_or_within IMP (MGI:5300833|PMID:22179047) MGI PMID:22179047 MGI:5300833 NCBI chr 8:111,912,007...111,933,813
Ensembl chr 8:111,912,011...111,933,881
JBrowse link
G Traf3ip1 TRAF3 interacting protein 1 acts_upstream_of_or_within IMP (MGI:5298450|PMID:21945076) MGI PMID:21945076 MGI:5298450 NCBI chr 1:91,494,590...91,529,307
Ensembl chr 1:91,494,647...91,529,307
JBrowse link
G Ttbk2 tau tubulin kinase 2 acts_upstream_of_or_within IMP (MGI:5493390|PMID:23141541) MGI PMID:23141541 MGI:5493390 NCBI chr 2:120,732,816...120,850,584
Ensembl chr 2:120,732,816...120,850,604
JBrowse link
G Tulp3 tubby-like protein 3 acts_upstream_of_or_within IMP (MGI:3841503|PMID:19286674), (MGI:3844764|PMID:19334287) MGI PMID:19286674 PMID:19334287 MGI:3841503 MGI:3844764 NCBI chr 6:128,321,140...128,355,873
Ensembl chr 6:128,321,161...128,355,851
JBrowse link
G Twist1 twist basic helix-loop-helix transcription factor 1 acts_upstream_of_or_within IMP (MGI:3042355|PMID:15030764) MGI PMID:15030764 MGI:3042355 NCBI chr12:33,957,671...33,959,831
Ensembl chr12:33,957,671...33,959,829
JBrowse link
G Wdpcp WD repeat containing planar cell polarity effector involved_in
acts_upstream_of_or_within
ISO
IMP
(MGI:5544506|PMID:24302887) MGI PMID:24302887 GO_REF:0000096 MGI:4834177 MGI:5544506 NCBI chr11:21,571,969...21,898,687
Ensembl chr11:21,572,235...21,898,989
JBrowse link
G Wnt5a wingless-type MMTV integration site family, member 5A acts_upstream_of_or_within IMP (MGI:4413372|PMID:19795512) MGI PMID:19795512 MGI:4413372 NCBI chr14:28,504,543...28,527,448
Ensembl chr14:28,504,750...28,527,448
JBrowse link
G Wnt7a wingless-type MMTV integration site family, member 7A involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 6:91,363,981...91,411,353
Ensembl chr 6:91,363,981...91,411,363
JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 involved_in ISO RGD
MGI
PMID:19191224 GO_REF:0000096 MGI:4417868 RGD:2312786 NCBI chr 9:48,651,797...48,836,225
Ensembl chr 9:48,654,297...48,836,222
JBrowse link
embryonic forelimb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a2 aldehyde dehydrogenase family 1, subfamily A2 acts_upstream_of_or_within IMP (MGI:3046038|PMID:15069081), (MGI:4422129|PMID:20034106) MGI PMID:15069081 PMID:20034106 MGI:3046038 MGI:4422129 NCBI chr 9:71,215,789...71,296,243
Ensembl chr 9:71,215,789...71,296,243
JBrowse link
G Alx3 aristaless-like homeobox 3 acts_upstream_of_or_within IGI (MGI:2151109|PMID:11641221) MGI PMID:11641221 MGI:2151109 NCBI chr 3:107,595,031...107,605,875
Ensembl chr 3:107,595,031...107,605,776
JBrowse link
G Alx4 aristaless-like homeobox 4 acts_upstream_of_or_within IGI (MGI:2151109|PMID:11641221) MGI PMID:11641221 MGI:2151109 NCBI chr 2:93,642,434...93,681,341
Ensembl chr 2:93,642,384...93,681,339
JBrowse link
G Cacna1c calcium channel, voltage-dependent, L type, alpha 1C subunit involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 6:118,587,240...119,197,384
Ensembl chr 6:118,587,240...119,196,890
Ensembl chr 6:118,587,240...119,196,890
JBrowse link
G Crabp2 cellular retinoic acid binding protein II acts_upstream_of_or_within IMP (MGI:71462|PMID:7720575) MGI PMID:7720575 MGI:71462 NCBI chr 3:87,948,693...87,953,372
Ensembl chr 3:87,948,666...87,953,376
JBrowse link
G Ctnnb1 catenin (cadherin associated protein), beta 1 acts_upstream_of_or_within IDA (MGI:3055626|PMID:15371327) MGI PMID:15371327 MGI:3055626 NCBI chr 9:120,933,400...120,960,507
Ensembl chr 9:120,929,216...120,960,507
JBrowse link
G En1 engrailed 1 acts_upstream_of_or_within IGI (MGI:1194987|PMID:9362463) MGI PMID:9362463 MGI:1194987 NCBI chr 1:120,602,487...120,607,991
Ensembl chr 1:120,602,418...120,607,992
JBrowse link
G Hoxa11 homeobox A11 acts_upstream_of_or_within IGI (MGI:5462316|PMID:22916278) MGI PMID:22916278 MGI:5462316 NCBI chr 6:52,242,105...52,245,810
Ensembl chr 6:52,242,106...52,245,810
JBrowse link
G Hoxa13 homeobox A13 acts_upstream_of_or_within IMP (MGI:3530958|PMID:15733672) MGI PMID:15733672 MGI:3530958 NCBI chr 6:52,258,853...52,260,880
Ensembl chr 6:52,257,694...52,260,880
JBrowse link
G Hoxa9 homeobox A9 acts_upstream_of_or_within IGI (MGI:78984|PMID:8625797) MGI PMID:8625797 MGI:78984 NCBI chr 6:52,223,097...52,227,370
Ensembl chr 6:52,223,100...52,231,089
JBrowse link
G Hoxd11 homeobox D11 acts_upstream_of_or_within IGI (MGI:5462316|PMID:22916278) MGI PMID:22916278 MGI:5462316 NCBI chr 2:74,679,558...74,687,016
Ensembl chr 2:74,679,557...74,687,016
JBrowse link
G Hoxd9 homeobox D9 acts_upstream_of_or_within IGI
IMP
(MGI:78984|PMID:8625797) MGI PMID:8625797 MGI:78984 NCBI chr 2:74,697,763...74,700,208
Ensembl chr 2:74,697,727...74,700,208
JBrowse link
G Ift122 intraflagellar transport 122 involved_in IMP (MGI:4888042|PMID:21209331) BHF-UCL PMID:21209331 MGI:4888042 NCBI chr 6:115,853,379...115,926,699
Ensembl chr 6:115,853,470...115,926,699
JBrowse link
G Lnpk lunapark, ER junction formation factor acts_upstream_of_or_within IMP (MGI:1097490|PMID:9342042)
(MGI:5462316|PMID:22916278)
MGI PMID:9342042 PMID:22916278 MGI:1097490 MGI:5462316 NCBI chr 2:74,514,836...74,579,458
Ensembl chr 2:74,520,291...74,579,435
JBrowse link
G Lrp6 low density lipoprotein receptor-related protein 6 acts_upstream_of_or_within IMP
IGI
(MGI:1891551|PMID:11029008)
(MGI:4413396|PMID:19653321)
(MGI:3578068|PMID:15880584)
(MGI:3774879|PMID:18256198)
MGI PMID:11029008 PMID:15880584 PMID:18256198 PMID:19653321 MGI:1891551 MGI:3578068 MGI:3774879 MGI:4413396 NCBI chr 6:134,446,476...134,566,913
Ensembl chr 6:134,446,476...134,566,965
JBrowse link
G Mecom MDS1 and EVI1 complex locus acts_upstream_of_or_within IMP (MGI:3686680|PMID:17029558) MGI PMID:17029558 MGI:3686680 NCBI chr 3:29,951,296...30,509,759
Ensembl chr 3:29,951,296...30,548,008
JBrowse link
G Msx1 msh homeobox 1 acts_upstream_of_or_within IGI (MGI:4948979|PMID:21465616) MGI PMID:21465616 MGI:4948979 NCBI chr 5:37,820,491...37,824,585
Ensembl chr 5:37,820,485...37,824,583
JBrowse link
G Msx2 msh homeobox 2 acts_upstream_of_or_within IGI (MGI:4948979|PMID:21465616) MGI PMID:21465616 MGI:4948979 NCBI chr13:53,466,881...53,472,780
Ensembl chr13:53,466,884...53,473,074
JBrowse link
G Nipbl NIPBL cohesin loading factor involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr15:8,289,824...8,465,315
Ensembl chr15:8,290,617...8,444,463
JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in IGI (MGI:4950000|PMID:21262216) BHF-UCL PMID:21262216 MGI:4950000 NCBI chr12:9,574,442...9,581,500
Ensembl chr12:9,570,116...9,581,500
JBrowse link
G Osr2 odd-skipped related 2 acts_upstream_of_or_within
involved_in
IEP
IGI
(PMID:11520675)
(MGI:4950000|PMID:21262216)
UniProt
BHF-UCL
PMID:11520675 PMID:21262216 MGI:4950000 NCBI chr15:35,296,098...35,303,305
Ensembl chr15:35,296,098...35,303,305
JBrowse link
G Rdh10 retinol dehydrogenase 10 (all-trans) acts_upstream_of_or_within IMP (MGI:3709664|PMID:17473173) MGI PMID:17473173 MGI:3709664 NCBI chr 1:16,105,882...16,132,550
Ensembl chr 1:16,105,774...16,133,734
JBrowse link
G Reck reversion-inducing-cysteine-rich protein with kazal motifs acts_upstream_of_or_within IMP (MGI:5424521|PMID:23213437) MGI PMID:23213437 MGI:5424521 NCBI chr 4:43,875,521...43,944,806
Ensembl chr 4:43,875,530...43,944,806
JBrowse link
G Rpgrip1l Rpgrip1-like acts_upstream_of_or_within IMP (MGI:3715393|PMID:17553904) MGI PMID:17553904 MGI:3715393 NCBI chr 8:91,217,030...91,313,291
Ensembl chr 8:91,217,030...91,313,262
JBrowse link
G Rspo2 R-spondin 2 acts_upstream_of_or_within IMP
IGI
(MGI:3774879|PMID:18256198) MGI PMID:18256198 MGI:3774879 NCBI chr15:43,020,788...43,171,594
Ensembl chr15:43,020,794...43,170,826
JBrowse link
G Runx2 runt related transcription factor 2 acts_upstream_of_or_within IMP (MGI:5462316|PMID:22916278) MGI PMID:22916278 MGI:5462316 NCBI chr17:44,495,987...44,814,797
Ensembl chr17:44,495,987...44,814,797
JBrowse link
G Shh sonic hedgehog acts_upstream_of_or_within IMP (MGI:1928592|PMID:11118883), (MGI:2149276|PMID:11476582) MGI PMID:11118883 PMID:11476582 MGI:1928592 MGI:2149276 NCBI chr 5:28,456,840...28,467,101
Ensembl chr 5:28,456,815...28,467,256
JBrowse link
G Shox2 short stature homeobox 2 acts_upstream_of_or_within IMP (MGI:5462316|PMID:22916278) MGI PMID:22916278 MGI:5462316 NCBI chr 3:66,971,723...66,981,771
Ensembl chr 3:66,971,727...66,981,771
JBrowse link
G Tbx3 T-box 3 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 5:119,670,534...119,684,724
Ensembl chr 5:119,670,669...119,684,724
JBrowse link
G Tbx5 T-box 5 involved_in
acts_upstream_of_or_within
ISO
IMP
(MGI:2150876|PMID:11572777), (MGI:2448173|PMID:12490567) MGI PMID:11572777 PMID:12490567 GO_REF:0000096 MGI:2150876 MGI:2448173 MGI:4834177 NCBI chr 5:119,796,514...119,885,220
Ensembl chr 5:119,832,668...119,885,219
JBrowse link
G Tfap2a transcription factor AP-2, alpha involved_in IMP (MGI:1313057|PMID:9811866) UniProt PMID:9811866 MGI:1313057 NCBI chr13:40,713,802...40,738,238
Ensembl chr13:40,715,302...40,738,376
JBrowse link
G Trp63 transformation related protein 63 acts_upstream_of_or_within IMP (MGI:5824492|PMID:25503409) MGI PMID:25503409 MGI:5824492 NCBI chr16:25,683,763...25,892,088
Ensembl chr16:25,683,763...25,892,102
JBrowse link
G Twist1 twist basic helix-loop-helix transcription factor 1 acts_upstream_of_or_within IMP (MGI:2180404|PMID:12175489) MGI PMID:12175489 MGI:2180404 NCBI chr12:33,957,671...33,959,831
Ensembl chr12:33,957,671...33,959,829
JBrowse link
G Wnt3 wingless-type MMTV integration site family, member 3 acts_upstream_of_or_within IMP (MGI:2450015|PMID:12569130) MGI PMID:12569130 MGI:2450015 NCBI chr11:103,774,175...103,818,021
Ensembl chr11:103,774,150...103,817,957
JBrowse link
G Wnt7a wingless-type MMTV integration site family, member 7A acts_upstream_of_or_within
involved_in
IMP
IGI
ISO
(MGI:1194987|PMID:9362463)
(MGI:3578068|PMID:15880584)
MGI PMID:9362463 PMID:15880584 GO_REF:0000096 MGI:1194987 MGI:3578068 MGI:4834177 MGI:48652 NCBI chr 6:91,363,981...91,411,353
Ensembl chr 6:91,363,981...91,411,363
JBrowse link
G Wnt9a wingless-type MMTV integration site family, member 9A acts_upstream_of_or_within IDA (MGI:3055626|PMID:15371327) MGI PMID:15371327 MGI:3055626 NCBI chr11:59,306,849...59,333,552
Ensembl chr11:59,306,928...59,333,552
JBrowse link
embryonic hindlimb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aff3 AF4/FMR2 family, member 3 involved_in
acts_upstream_of_or_within
ISO
IEP
(PMID:18616733) MGI
BHF-UCL
PMID:18616733 GO_REF:0000096 MGI:4834177 NCBI chr 1:38,175,393...38,630,178
Ensembl chr 1:38,177,326...38,664,955
JBrowse link
G Alx3 aristaless-like homeobox 3 acts_upstream_of_or_within IGI (MGI:2151109|PMID:11641221) MGI PMID:11641221 MGI:2151109 NCBI chr 3:107,595,031...107,605,875
Ensembl chr 3:107,595,031...107,605,776
JBrowse link
G Alx4 aristaless-like homeobox 4 acts_upstream_of_or_within IGI (MGI:2151109|PMID:11641221) MGI PMID:11641221 MGI:2151109 NCBI chr 2:93,642,434...93,681,341
Ensembl chr 2:93,642,384...93,681,339
JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within IGI (MGI:1889107|PMID:10964473) MGI PMID:10964473 MGI:1889107 NCBI chr14:46,383,525...46,390,669
Ensembl chr14:46,383,520...46,390,669
JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 acts_upstream_of_or_within IMP (MGI:3611161|PMID:16207732) MGI PMID:16207732 MGI:3611161 NCBI chr 4:8,690,402...8,868,449
Ensembl chr 4:8,690,406...8,867,659
JBrowse link
G Ctnnb1 catenin (cadherin associated protein), beta 1 acts_upstream_of_or_within IMP (MGI:2670493|PMID:12923052)
(MGI:3773938|PMID:18231602)
MGI PMID:12923052 PMID:18231602 MGI:2670493 MGI:3773938 NCBI chr 9:120,933,400...120,960,507
Ensembl chr 9:120,929,216...120,960,507
JBrowse link
G Dicer1 dicer 1, ribonuclease type III acts_upstream_of_or_within IMP (MGI:3609457|PMID:16319892) MGI PMID:16319892 MGI:3609457 NCBI chr12:104,687,740...104,751,968
Ensembl chr12:104,687,742...104,751,952
JBrowse link
G Fgf4 fibroblast growth factor 4 acts_upstream_of_or_within IGI (MGI:3608165|PMID:16245339) MGI PMID:16245339 MGI:3608165 NCBI chr 7:144,861,386...144,865,245
Ensembl chr 7:144,847,367...144,865,243
JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within IGI (MGI:3608165|PMID:16245339) MGI PMID:16245339 MGI:3608165 NCBI chr19:45,736,491...45,742,941
Ensembl chr19:45,736,798...45,742,915
JBrowse link
G Gnas GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus acts_upstream_of_or_within IMP (MGI:3619837|PMID:15797856) MGI PMID:15797856 MGI:3619837 NCBI chr 2:174,284,320...174,346,744
Ensembl chr 2:174,284,320...174,346,744
JBrowse link
G Gpc3 glypican 3 acts_upstream_of_or_within IGI (MGI:1889107|PMID:10964473) MGI PMID:10964473 MGI:1889107 NCBI chr  X:52,272,426...52,613,974
Ensembl chr  X:52,272,426...52,613,950
JBrowse link
G Lmbr1 limb region 1 acts_upstream_of_or_within ISO MGI GO_REF:0000008 MGI:2154458 NCBI chr 5:29,229,802...29,378,421
Ensembl chr 5:29,229,802...29,378,390
JBrowse link
G Lrp6 low density lipoprotein receptor-related protein 6 acts_upstream_of_or_within IGI
IMP
(MGI:3578068|PMID:15880584)
(MGI:4413396|PMID:19653321)
(MGI:3774879|PMID:18256198)
MGI PMID:15880584 PMID:18256198 PMID:19653321 MGI:3578068 MGI:3774879 MGI:4413396 NCBI chr 6:134,446,476...134,566,913
Ensembl chr 6:134,446,476...134,566,965
JBrowse link
G Mecom MDS1 and EVI1 complex locus acts_upstream_of_or_within IMP (MGI:3686680|PMID:17029558) MGI PMID:17029558 MGI:3686680 NCBI chr 3:29,951,296...30,509,759
Ensembl chr 3:29,951,296...30,548,008
JBrowse link
G Med1 mediator complex subunit 1 acts_upstream_of_or_within IMP (MGI:2682174|PMID:14500757) MGI PMID:14500757 MGI:2682174 NCBI chr11:98,152,154...98,193,313
Ensembl chr11:98,152,154...98,193,293
JBrowse link
G Mmp13 matrix metallopeptidase 13 ISO RGD PMID:11850435 RGD:1582550 NCBI chr 9:7,272,514...7,283,333
Ensembl chr 9:7,272,514...7,283,331
JBrowse link
G Msx1 msh homeobox 1 acts_upstream_of_or_within IGI (MGI:4948979|PMID:21465616) MGI PMID:21465616 MGI:4948979 NCBI chr 5:37,820,491...37,824,585
Ensembl chr 5:37,820,485...37,824,583
JBrowse link
G Msx2 msh homeobox 2 acts_upstream_of_or_within IGI (MGI:4948979|PMID:21465616) MGI PMID:21465616 MGI:4948979 NCBI chr13:53,466,881...53,472,780
Ensembl chr13:53,466,884...53,473,074
JBrowse link
G Notch1 notch 1 acts_upstream_of_or_within IMP (MGI:3608163|PMID:16245338) MGI PMID:16245338 MGI:3608163 NCBI chr 2:26,457,902...26,503,822
Ensembl chr 2:26,457,903...26,516,663
JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in IGI (MGI:4950000|PMID:21262216) BHF-UCL PMID:21262216 MGI:4950000 NCBI chr12:9,574,442...9,581,500
Ensembl chr12:9,570,116...9,581,500
JBrowse link
G Osr2 odd-skipped related 2 acts_upstream_of_or_within
involved_in
IEP
IGI
(PMID:11520675)
(MGI:4950000|PMID:21262216)
UniProt
BHF-UCL
PMID:11520675 PMID:21262216 MGI:4950000 NCBI chr15:35,296,098...35,303,305
Ensembl chr15:35,296,098...35,303,305
JBrowse link
G Pitx1 paired-like homeodomain transcription factor 1 acts_upstream_of_or_within
involved_in
IGI
IMP
(MGI:3773938|PMID:18231602)
(MGI:5299938|PMID:22071103)
MGI
CACAO
PMID:18231602 PMID:22071103 MGI:3773938 MGI:5299938 NCBI chr13:55,825,044...55,836,190
Ensembl chr13:55,825,051...55,836,192
JBrowse link
G Pitx2 paired-like homeodomain transcription factor 2 acts_upstream_of_or_within IGI (MGI:3773938|PMID:18231602) MGI PMID:18231602 MGI:3773938 NCBI chr 3:129,199,878...129,219,594
Ensembl chr 3:129,199,878...129,219,591
JBrowse link
G Rarb retinoic acid receptor, beta acts_upstream_of_or_within IGI (MGI:1334064|PMID:10075839) MGI PMID:10075839 MGI:1334064 NCBI chr14:16,430,839...17,082,331
Ensembl chr14:16,430,839...16,819,156
JBrowse link
G Rarg retinoic acid receptor, gamma acts_upstream_of_or_within IGI (MGI:1334064|PMID:10075839) MGI PMID:10075839 MGI:1334064 NCBI chr15:102,234,938...102,257,522
Ensembl chr15:102,234,938...102,257,517
JBrowse link
G Rpgrip1l Rpgrip1-like acts_upstream_of_or_within IMP (MGI:3715393|PMID:17553904) MGI PMID:17553904 MGI:3715393 NCBI chr 8:91,217,030...91,313,291
Ensembl chr 8:91,217,030...91,313,262
JBrowse link
G Rspo2 R-spondin 2 acts_upstream_of_or_within IGI
IMP
(MGI:3774879|PMID:18256198) MGI PMID:18256198 MGI:3774879 NCBI chr15:43,020,788...43,171,594
Ensembl chr15:43,020,794...43,170,826
JBrowse link
G Shh sonic hedgehog acts_upstream_of_or_within IMP (MGI:1928592|PMID:11118883) MGI PMID:11118883 MGI:1928592 NCBI chr 5:28,456,840...28,467,101
Ensembl chr 5:28,456,815...28,467,256
JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within IMP (MGI:3604915|PMID:16192310) MGI PMID:16192310 MGI:3604915 NCBI chr 9:21,616,106...21,704,230
Ensembl chr 9:21,616,169...21,704,230
JBrowse link
G Tbx3 T-box 3 acts_upstream_of_or_within IMP (MGI:5532232|PMID:23844108) MGI PMID:23844108 MGI:5532232 NCBI chr 5:119,670,534...119,684,724
Ensembl chr 5:119,670,669...119,684,724
JBrowse link
G Tbx4 T-box 4 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:85,886,367...85,916,097
Ensembl chr11:85,886,422...85,916,097
JBrowse link
G Trp63 transformation related protein 63 acts_upstream_of_or_within IMP (MGI:5824492|PMID:25503409) MGI PMID:25503409 MGI:5824492 NCBI chr16:25,683,763...25,892,088
Ensembl chr16:25,683,763...25,892,102
JBrowse link
G Twist1 twist basic helix-loop-helix transcription factor 1 involved_in IMP (MGI:1100098|PMID:8988167) BHF-UCL PMID:8988167 MGI:1100098 NCBI chr12:33,957,671...33,959,831
Ensembl chr12:33,957,671...33,959,829
JBrowse link
G Wnt3 wingless-type MMTV integration site family, member 3 acts_upstream_of_or_within IMP (MGI:2450015|PMID:12569130) MGI PMID:12569130 MGI:2450015 NCBI chr11:103,774,175...103,818,021
Ensembl chr11:103,774,150...103,817,957
JBrowse link
G Wnt7a wingless-type MMTV integration site family, member 7A acts_upstream_of_or_within
involved_in
IGI
ISO
(MGI:3578068|PMID:15880584) MGI PMID:15880584 GO_REF:0000096 MGI:3578068 MGI:4834177 NCBI chr 6:91,363,981...91,411,353
Ensembl chr 6:91,363,981...91,411,363
JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 acts_upstream_of_or_within
involved_in
IMP
ISO
(MGI:1859075|PMID:10835630) MGI
RGD
PMID:10835630 PMID:19191224 GO_REF:0000096 MGI:1859075 MGI:4417868 RGD:2312786 NCBI chr 9:48,651,797...48,836,225
Ensembl chr 9:48,654,297...48,836,222
JBrowse link
embryonic limb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acd adrenocortical dysplasia acts_upstream_of_or_within IMP (MGI:3526782|PMID:15537664) MGI PMID:15537664 MGI:3526782 NCBI chr 8:105,698,155...105,701,228
Ensembl chr 8:105,695,860...105,701,102
JBrowse link
G Aldh1a2 aldehyde dehydrogenase family 1, subfamily A2 acts_upstream_of_or_within IMP (MGI:2681052|PMID:14623241) MGI PMID:14623241 MGI:2681052 NCBI chr 9:71,215,789...71,296,243
Ensembl chr 9:71,215,789...71,296,243
JBrowse link
G Alx1 ALX homeobox 1 acts_upstream_of_or_within IGI (MGI:1314705|PMID:9847249) MGI PMID:9847249 MGI:1314705 NCBI chr10:103,007,847...103,029,549
Ensembl chr10:102,998,707...103,030,215
JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within IMP
IGI
(MGI:1270933|PMID:9664686) MGI PMID:9664686 MGI:1270933 NCBI chr14:46,383,525...46,390,669
Ensembl chr14:46,383,520...46,390,669
JBrowse link
G Bmp7 bone morphogenetic protein 7 acts_upstream_of_or_within IMP
IGI
(MGI:1270933|PMID:9664686) MGI PMID:9664686 MGI:1270933 NCBI chr 2:172,868,012...172,940,321
Ensembl chr 2:172,868,012...172,940,321
JBrowse link
G C2cd3 C2 calcium-dependent domain containing 3 acts_upstream_of_or_within IMP (MGI:3821640|PMID:19004860) MGI PMID:19004860 MGI:3821640 NCBI chr 7:100,372,229...100,470,159
Ensembl chr 7:100,372,233...100,470,152
JBrowse link
G Chst11 carbohydrate sulfotransferase 11 acts_upstream_of_or_within IMP (MGI:3767479|PMID:16079159) MGI PMID:16079159 MGI:3767479 NCBI chr10:82,984,440...83,195,904
Ensembl chr10:82,985,498...83,195,900
JBrowse link
G Cyp26b1 cytochrome P450, family 26, subfamily b, polypeptide 1 acts_upstream_of_or_within IMP (MGI:3037623|PMID:15030763) MGI PMID:15030763 MGI:3037623 NCBI chr 6:84,571,414...84,593,908
Ensembl chr 6:84,571,414...84,593,908
JBrowse link
G Dicer1 dicer 1, ribonuclease type III acts_upstream_of_or_within IMP (MGI:3588609|PMID:16040801) MGI PMID:16040801 MGI:3588609 NCBI chr12:104,687,740...104,751,968
Ensembl chr12:104,687,742...104,751,952
JBrowse link
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 acts_upstream_of_or_within IGI (MGI:3052394|PMID:15242796) MGI PMID:15242796 MGI:3052394 NCBI chr19:30,545,876...30,549,496
Ensembl chr19:30,545,863...30,549,665
JBrowse link
G Dlx5 distal-less homeobox 5 acts_upstream_of_or_within IGI (MGI:3794467|PMID:18326838)
(MGI:2181241|PMID:12112878)
MGI PMID:12112878 PMID:18326838 MGI:2181241 MGI:3794467 NCBI chr 6:6,877,801...6,882,068
Ensembl chr 6:6,877,805...6,882,085
JBrowse link
G Dlx6 distal-less homeobox 6 acts_upstream_of_or_within IGI (MGI:2181241|PMID:12112878)
(MGI:3794467|PMID:18326838)
MGI PMID:12112878 PMID:18326838 MGI:2181241 MGI:3794467 NCBI chr 6:6,863,334...6,867,970
Ensembl chr 6:6,863,334...6,868,568
JBrowse link
G Dync2h1 dynein cytoplasmic 2 heavy chain 1 acts_upstream_of_or_within IMP (MGI:3610248|PMID:16229832) MGI PMID:16229832 MGI:3610248 NCBI chr 9:6,928,550...7,178,306
Ensembl chr 9:6,928,503...7,184,446
JBrowse link
G En1 engrailed 1 acts_upstream_of_or_within
involved_in
IMP
IGI
(MGI:81767|PMID:8684466)
(MGI:3052394|PMID:15242796)
(MGI:75252|PMID:7624797)
MGI
ParkinsonsUK-UCL
PMID:7624797 PMID:8684466 PMID:15242796 MGI:3052394 MGI:75252 MGI:81767 NCBI chr 1:120,602,487...120,607,991
Ensembl chr 1:120,602,418...120,607,992
JBrowse link
G Fbn2 fibrillin 2 acts_upstream_of_or_within IMP (MGI:1934650|PMID:11350121)
(MGI:1933664|PMID:11285249)
MGI PMID:11285249 PMID:11350121 MGI:1933664 MGI:1934650 NCBI chr18:58,008,623...58,210,572
Ensembl chr18:58,008,623...58,210,487
JBrowse link
G Fgf4 fibroblast growth factor 4 acts_upstream_of_or_within IGI (MGI:3056042|PMID:15328019) MGI PMID:15328019 MGI:3056042 NCBI chr 7:144,861,386...144,865,245
Ensembl chr 7:144,847,367...144,865,243
JBrowse link
G Fgf9 fibroblast growth factor 9 acts_upstream_of_or_within IMP (MGI:3714711|PMID:17576930) MGI PMID:17576930 MGI:3714711 NCBI chr14:58,070,671...58,112,854
Ensembl chr14:58,070,547...58,112,720
JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 acts_upstream_of_or_within IMP (MGI:3608262|PMID:16207751) MGI PMID:16207751 MGI:3608262 NCBI chr 8:25,518,759...25,575,718
Ensembl chr 8:25,513,654...25,575,718
JBrowse link
G Fras1 Fraser extracellular matrix complex subunit 1 acts_upstream_of_or_within IMP (MGI:5505384|PMID:23469164) MGI PMID:23469164 MGI:5505384 NCBI chr 5:96,373,777...96,784,733
Ensembl chr 5:96,373,955...96,784,728
JBrowse link
G Gdf5 growth differentiation factor 5 acts_upstream_of_or_within IMP (MGI:3513212|PMID:15542031) MGI PMID:15542031 MGI:3513212 NCBI chr 2:155,941,023...155,945,367
Ensembl chr 2:155,941,023...155,945,367
JBrowse link
G Gja5 gap junction protein, alpha 5 acts_upstream_of_or_within IMP (MGI:3581374|PMID:15923624) MGI PMID:15923624 MGI:3581374 NCBI chr 3:97,032,402...97,053,634
Ensembl chr 3:96,904,693...97,077,416
JBrowse link
G Gli3 GLI-Kruppel family member GLI3 acts_upstream_of_or_within IGI
IMP
(MGI:3608261|PMID:16284117)
(MGI:2384366|PMID:12142027), (MGI:2445242|PMID:12435361), (MGI:2445270|PMID:12435627), (MGI:4367286|PMID:19809516), (MGI:52587|PMID:8387379)
(MGI:3851667|PMID:19422820)
MGI PMID:8387379 PMID:12142027 PMID:12435361 PMID:12435627 PMID:16284117 More... MGI:2384366 MGI:2445242 MGI:2445270 MGI:3608261 MGI:3851667 MGI:4367286 MGI:52587 NCBI chr13:15,463,723...15,730,026
Ensembl chr13:15,463,235...15,730,026
JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist acts_upstream_of_or_within IMP (MGI:2665160|PMID:12808456) MGI PMID:12808456 MGI:2665160 NCBI chr 2:113,748,675...113,758,648
Ensembl chr 2:113,746,164...113,758,646
JBrowse link
G Hnf1a HNF1 homeobox A acts_upstream_of_or_within IGI (MGI:1334099|PMID:10090727) MGI PMID:10090727 MGI:1334099 NCBI chr 5:114,948,980...114,971,062
Ensembl chr 5:114,948,980...114,971,094
JBrowse link
G Hoxa10 homeobox A10 acts_upstream_of_or_within IGI (MGI:2667742|PMID:12869760) MGI PMID:12869760 MGI:2667742 NCBI chr 6:52,231,197...52,240,854
Ensembl chr 6:52,231,197...52,240,854
JBrowse link
G Hoxa11 homeobox A11 acts_upstream_of_or_within IGI (MGI:3043491|PMID:14668414) MGI PMID:14668414 MGI:3043491 NCBI chr 6:52,242,105...52,245,810
Ensembl chr 6:52,242,106...52,245,810
JBrowse link
G Hoxc10 homeobox C10 acts_upstream_of_or_within IGI (MGI:2667742|PMID:12869760) MGI PMID:12869760 MGI:2667742 NCBI chr15:102,966,796...102,971,898
Ensembl chr15:102,966,796...102,971,893
JBrowse link
G Hoxd10 homeobox D10 acts_upstream_of_or_within IGI (MGI:2667742|PMID:12869760) MGI PMID:12869760 MGI:2667742 NCBI chr 2:74,684,273...74,695,106
Ensembl chr 2:74,691,924...74,695,105
JBrowse link
G Hoxd11 homeobox D11 acts_upstream_of_or_within IGI (MGI:3043491|PMID:14668414) MGI PMID:14668414 MGI:3043491 NCBI chr 2:74,679,558...74,687,016
Ensembl chr 2:74,679,557...74,687,016
JBrowse link
G Hoxd13 homeobox D13 acts_upstream_of_or_within IMP (MGI:2177382|PMID:11850178) MGI PMID:11850178 MGI:2177382 NCBI chr 2:74,668,225...74,671,603
Ensembl chr 2:74,668,310...74,671,599
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within IGI (MGI:1334099|PMID:10090727) MGI PMID:10090727 MGI:1334099 NCBI chr 3:131,110,297...131,224,357
Ensembl chr 3:131,110,471...131,224,356
JBrowse link
G Lmx1b LIM homeobox transcription factor 1 beta involved_in NAS (MGI:3687803|PMID:10767331) UniProt PMID:10767331 MGI:3687803 NCBI chr 2:33,560,965...33,641,208
Ensembl chr 2:33,560,965...33,640,511
Ensembl chr 2:33,560,965...33,640,511
JBrowse link
G Lrp4 low density lipoprotein receptor-related protein 4 acts_upstream_of_or_within IMP (MGI:3619629|PMID:16207730)
(MGI:3703100|PMID:17119023)
MGI PMID:16207730 PMID:17119023 MGI:3619629 MGI:3703100 NCBI chr 2:91,457,456...91,513,901
Ensembl chr 2:91,457,511...91,513,779
JBrowse link
G Lrp6 low density lipoprotein receptor-related protein 6 acts_upstream_of_or_within IGI (MGI:4458999|PMID:20359476) MGI PMID:20359476 MGI:4458999 NCBI chr 6:134,446,476...134,566,913
Ensembl chr 6:134,446,476...134,566,965
JBrowse link
G Mbnl1 muscleblind like splicing factor 1 acts_upstream_of_or_within IEP (PMID:12915312) UniProt PMID:12915312 NCBI chr 3:60,472,559...60,629,750
Ensembl chr 3:60,472,830...60,629,750
JBrowse link
G Megf8 multiple EGF-like-domains 8 involved_in IMP (MGI:5551355|PMID:24052814) UniProt PMID:24052814 MGI:5551355 NCBI chr 7:25,316,738...25,365,917
Ensembl chr 7:25,317,164...25,365,917
JBrowse link
G Msx1 msh homeobox 1 acts_upstream_of_or_within IGI (MGI:3851667|PMID:19422820)
(MGI:3580732|PMID:15930102)
MGI PMID:15930102 PMID:19422820 MGI:3580732 MGI:3851667 NCBI chr 5:37,820,491...37,824,585
Ensembl chr 5:37,820,485...37,824,583
JBrowse link
G Msx2 msh homeobox 2 acts_upstream_of_or_within IGI (MGI:3851667|PMID:19422820)
(MGI:3580732|PMID:15930102)
MGI PMID:15930102 PMID:19422820 MGI:3580732 MGI:3851667 NCBI chr13:53,466,881...53,472,780
Ensembl chr13:53,466,884...53,473,074
JBrowse link
G Mustn1 musculoskeletal, embryonic nuclear protein 1 ISO RGD PMID:14718386 RGD:1302424 NCBI chr14:30,879,257...30,881,610
Ensembl chr14:30,879,200...30,881,610
JBrowse link
G Notch1 notch 1 acts_upstream_of_or_within IGI (MGI:3610505|PMID:16169548) MGI PMID:16169548 MGI:3610505 NCBI chr 2:26,457,902...26,503,822
Ensembl chr 2:26,457,903...26,516,663
JBrowse link
G Notch2 notch 2 acts_upstream_of_or_within IGI (MGI:3610505|PMID:16169548) MGI PMID:16169548 MGI:3610505 NCBI chr 3:98,013,538...98,150,367
Ensembl chr 3:98,013,527...98,150,361
JBrowse link
G Pbx1 pre B cell leukemia homeobox 1 acts_upstream_of_or_within IGI (MGI:3629247|PMID:16672333) MGI PMID:16672333 MGI:3629247 NCBI chr 1:168,119,364...168,432,365
Ensembl chr 1:168,119,364...168,432,270
JBrowse link
G Pbx2 pre B cell leukemia homeobox 2 acts_upstream_of_or_within IGI (MGI:3629247|PMID:16672333) MGI PMID:16672333 MGI:3629247 NCBI chr17:34,592,259...34,597,400
Ensembl chr17:34,591,266...34,597,400
JBrowse link
G Prrx1 paired related homeobox 1 acts_upstream_of_or_within IGI (MGI:1306737|PMID:9729491), (MGI:1328643|PMID:9882503) MGI PMID:9729491 PMID:9882503 MGI:1306737 MGI:1328643 NCBI chr 1:163,245,119...163,315,145
Ensembl chr 1:163,245,119...163,313,710
JBrowse link
G Prrx2 paired related homeobox 2 acts_upstream_of_or_within IGI (MGI:1306737|PMID:9729491), (MGI:1328643|PMID:9882503) MGI PMID:9729491 PMID:9882503 MGI:1306737 MGI:1328643 NCBI chr 2:30,845,064...30,881,251
Ensembl chr 2:30,834,972...30,881,251
JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within IGI (MGI:3610505|PMID:16169548) MGI PMID:16169548 MGI:3610505 NCBI chr12:83,688,152...83,735,095
Ensembl chr12:83,688,152...83,735,199
JBrowse link
G Psen2 presenilin 2 acts_upstream_of_or_within IGI (MGI:3610505|PMID:16169548) MGI PMID:16169548 MGI:3610505 NCBI chr 1:180,227,004...180,263,467
Ensembl chr 1:180,227,004...180,263,438
JBrowse link
G Ptch1 patched 1 acts_upstream_of_or_within IMP
IGI
(MGI:2152606|PMID:11784021)
(MGI:2135419|PMID:11389830)
MGI PMID:11389830 PMID:11784021 MGI:2135419 MGI:2152606 NCBI chr13:63,508,328...63,573,460
Ensembl chr13:63,508,328...63,573,598
JBrowse link
G Sall4 spalt like transcription factor 4 acts_upstream_of_or_within IMP
IGI
(MGI:3614736|PMID:16380715) MGI PMID:16380715 MGI:3614736 NCBI chr 2:168,748,332...168,767,201
Ensembl chr 2:168,748,332...168,767,943
JBrowse link
G Shh sonic hedgehog acts_upstream_of_or_within IGI
IMP
(MGI:3851667|PMID:19422820)
(MGI:3053241|PMID:15315763)
(MGI:2135419|PMID:11389830)
MGI PMID:11389830 PMID:15315763 PMID:19422820 MGI:2135419 MGI:3053241 MGI:3851667 NCBI chr 5:28,456,840...28,467,101
Ensembl chr 5:28,456,815...28,467,256
JBrowse link
G Shox2 short stature homeobox 2 acts_upstream_of_or_within IMP (MGI:3621617|PMID:16537395)
(MGI:3714677|PMID:17481601)
MGI PMID:16537395 PMID:17481601 MGI:3621617 MGI:3714677 NCBI chr 3:66,971,723...66,981,771
Ensembl chr 3:66,971,727...66,981,771
JBrowse link
G Ski ski sarcoma viral oncogene homolog (avian) acts_upstream_of_or_within IMP (MGI:2445270|PMID:12435627) MGI PMID:12435627 MGI:2445270 NCBI chr 4:155,154,075...155,222,535
Ensembl chr 4:155,154,075...155,222,592
JBrowse link
G Sp8 trans-acting transcription factor 8 acts_upstream_of_or_within
involved_in
IMP (MGI:2679409|PMID:14597661)
(MGI:3526745|PMID:15358670)
MGI
UniProt
PMID:14597661 PMID:15358670 MGI:2679409 MGI:3526745 NCBI chr12:118,846,288...118,852,578
Ensembl chr12:118,846,329...118,852,576
JBrowse link
G Sp9 trans-acting transcription factor 9 involved_in IMP (MGI:3526745|PMID:15358670) UniProt PMID:15358670 MGI:3526745 NCBI chr 2:73,271,926...73,275,771
Ensembl chr 2:73,271,925...73,284,706
JBrowse link
G Tbx4 T-box 4 acts_upstream_of_or_within IMP (MGI:2660720|PMID:12736212) MGI PMID:12736212 MGI:2660720 NCBI chr11:85,886,367...85,916,097
Ensembl chr11:85,886,422...85,916,097
JBrowse link
G Tbx5 T-box 5 acts_upstream_of_or_within
involved_in
IMP
IGI
ISO
(MGI:2660722|PMID:12736217)
(MGI:3614736|PMID:16380715)
MGI PMID:12736217 PMID:16380715 GO_REF:0000096 MGI:2660722 MGI:3614736 MGI:4834177 NCBI chr 5:119,796,514...119,885,220
Ensembl chr 5:119,832,668...119,885,219
JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in IMP (MGI:894212|PMID:9217007) BHF-UCL PMID:9217007 MGI:894212 NCBI chr 1:186,622,787...186,709,697
Ensembl chr 1:186,622,792...186,705,989
JBrowse link
G Trp63 transformation related protein 63 acts_upstream_of_or_within IMP
IGI
(MGI:1335634|PMID:10227293)
(MGI:3794467|PMID:18326838)
MGI PMID:10227293 PMID:18326838 MGI:1335634 MGI:3794467 NCBI chr16:25,683,763...25,892,088
Ensembl chr16:25,683,763...25,892,102
JBrowse link
G Twist1 twist basic helix-loop-helix transcription factor 1 acts_upstream_of_or_within IMP (MGI:2384366|PMID:12142027)
(MGI:1934650|PMID:11350121)
(MGI:3042355|PMID:15030764)
MGI PMID:11350121 PMID:12142027 PMID:15030764 MGI:1934650 MGI:2384366 MGI:3042355 NCBI chr12:33,957,671...33,959,831
Ensembl chr12:33,957,671...33,959,829
JBrowse link
G Wdr19 WD repeat domain 19 acts_upstream_of_or_within IMP (MGI:5314316|PMID:22228095) MGI PMID:22228095 MGI:5314316 NCBI chr 5:65,199,696...65,260,415
Ensembl chr 5:65,199,696...65,260,415
JBrowse link
G Wnt5a wingless-type MMTV integration site family, member 5A acts_upstream_of_or_within IMP (MGI:1329804|PMID:10021340) MGI PMID:10021340 MGI:1329804 NCBI chr14:28,504,543...28,527,448
Ensembl chr14:28,504,750...28,527,448
JBrowse link
G Wnt7a wingless-type MMTV integration site family, member 7A acts_upstream_of_or_within IGI (MGI:3052394|PMID:15242796) MGI PMID:15242796 MGI:3052394 NCBI chr 6:91,363,981...91,411,353
Ensembl chr 6:91,363,981...91,411,363
JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 acts_upstream_of_or_within IMP MGI MGI:61278 NCBI chr 9:48,651,797...48,836,225
Ensembl chr 9:48,654,297...48,836,222
JBrowse link
embryonic nail plate morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fzd6 frizzled class receptor 6 acts_upstream_of_or_within IMP (MGI:5499279|PMID:23439395) MGI PMID:23439395 MGI:5499279 NCBI chr15:39,006,149...39,038,192
Ensembl chr15:39,006,034...39,038,188
JBrowse link
G Msx1 msh homeobox 1 involved_in
acts_upstream_of_or_within
ISO
IMP
IGI
(MGI:3688967|PMID:11369996)
(MGI:4948979|PMID:21465616)
MGI
BHF-UCL
PMID:11369996 PMID:21465616 GO_REF:0000096 MGI:3688967 MGI:4834177 MGI:4948979 NCBI chr 5:37,820,491...37,824,585
Ensembl chr 5:37,820,485...37,824,583
JBrowse link
G Msx2 msh homeobox 2 acts_upstream_of_or_within IGI (MGI:4948979|PMID:21465616) MGI PMID:21465616 MGI:4948979 NCBI chr13:53,466,881...53,472,780
Ensembl chr13:53,466,884...53,473,074
JBrowse link
embryonic skeletal limb joint morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin (cadherin associated protein), beta 1 involved_in IGI (MGI:4950000|PMID:21262216) BHF-UCL PMID:21262216 MGI:4950000 NCBI chr 9:120,933,400...120,960,507
Ensembl chr 9:120,929,216...120,960,507
JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in IGI (MGI:4950000|PMID:21262216) BHF-UCL PMID:21262216 MGI:4950000 NCBI chr12:9,574,442...9,581,500
Ensembl chr12:9,570,116...9,581,500
JBrowse link
G Osr2 odd-skipped related 2 involved_in IGI (MGI:4950000|PMID:21262216) BHF-UCL PMID:21262216 MGI:4950000 NCBI chr15:35,296,098...35,303,305
Ensembl chr15:35,296,098...35,303,305
JBrowse link
forelimb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fmn1 formin 1 acts_upstream_of_or_within IMP (MGI:3717025|PMID:17554679) MGI PMID:17554679 MGI:3717025 NCBI chr 2:113,327,664...113,716,768
Ensembl chr 2:113,327,736...113,716,767
JBrowse link
G Gdf5 growth differentiation factor 5 acts_upstream_of_or_within IMP (MGI:65616|PMID:8145850) MGI PMID:8145850 MGI:65616 NCBI chr 2:155,941,023...155,945,367
Ensembl chr 2:155,941,023...155,945,367
JBrowse link
G Hoxd10 homeobox D10 acts_upstream_of_or_within IGI (MGI:1350864|PMID:10642795) MGI PMID:10642795 MGI:1350864 NCBI chr 2:74,684,273...74,695,106
Ensembl chr 2:74,691,924...74,695,105
JBrowse link
G Hoxd9 homeobox D9 acts_upstream_of_or_within IGI (MGI:1350864|PMID:10642795) MGI PMID:10642795 MGI:1350864 NCBI chr 2:74,697,763...74,700,208
Ensembl chr 2:74,697,727...74,700,208
JBrowse link
G Nipbl NIPBL cohesin loading factor involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr15:8,289,824...8,465,315
Ensembl chr15:8,290,617...8,444,463
JBrowse link
G Rnf165 ring finger protein 165 acts_upstream_of_or_within IMP (MGI:5499270|PMID:23610558) MGI PMID:23610558 MGI:5499270 NCBI chr18:77,456,110...77,565,136
Ensembl chr18:77,456,110...77,565,161
JBrowse link
G Sall1 spalt like transcription factor 1 acts_upstream_of_or_within IGI (MGI:3829797|PMID:19168674) MGI PMID:19168674 MGI:3829797 NCBI chr 8:89,027,242...89,044,162
Ensembl chr 8:89,027,235...89,044,162
JBrowse link
G Sall3 spalt like transcription factor 3 acts_upstream_of_or_within IGI (MGI:3829797|PMID:19168674) MGI PMID:19168674 MGI:3829797 NCBI chr18:80,966,989...80,987,021
Ensembl chr18:80,966,376...80,986,771
JBrowse link
G Tbx3 T-box 3 acts_upstream_of_or_within ISO (MGI:1346580|PMID:9207801) MGI PMID:9207801 MGI:1346580 NCBI chr 5:119,670,534...119,684,724
Ensembl chr 5:119,670,669...119,684,724
JBrowse link
G Tbx5 T-box 5 acts_upstream_of_or_within ISO
IMP
(MGI:84816|PMID:8988164), (MGI:84817|PMID:8988165)
(MGI:3527352|PMID:15621531)
MGI PMID:8988164 PMID:8988165 PMID:15621531 MGI:3527352 MGI:84816 MGI:84817 NCBI chr 5:119,796,514...119,885,220
Ensembl chr 5:119,832,668...119,885,219
JBrowse link
G Tfap2a transcription factor AP-2, alpha acts_upstream_of_or_within IMP (MGI:1313057|PMID:9811866) MGI PMID:9811866 MGI:1313057 NCBI chr13:40,713,802...40,738,238
Ensembl chr13:40,715,302...40,738,376
JBrowse link
G Tfap2b transcription factor AP-2 beta involved_in IMP (MGI:5287515|PMID:21829553) UniProt PMID:21829553 MGI:5287515 NCBI chr 1:19,208,908...19,238,845
Ensembl chr 1:19,208,914...19,238,576
JBrowse link
G Wnt7a wingless-type MMTV integration site family, member 7A acts_upstream_of_or_within IMP MGI MGI:48652 NCBI chr 6:91,363,981...91,411,353
Ensembl chr 6:91,363,981...91,411,363
JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 acts_upstream_of_or_within IMP (MGI:1859075|PMID:10835630) MGI PMID:10835630 MGI:1859075 NCBI chr 9:48,651,797...48,836,225
Ensembl chr 9:48,654,297...48,836,222
JBrowse link
hindlimb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp7a ATPase, Cu++ transporting, alpha polypeptide acts_upstream_of_or_within IMP MGI MGI:61157 NCBI chr  X:106,027,224...106,128,161
Ensembl chr  X:106,027,276...106,124,926
JBrowse link
G Bmpr1a bone morphogenetic protein receptor, type 1A acts_upstream_of_or_within IMP (MGI:3621084|PMID:16556916) MGI PMID:16556916 MGI:3621084 NCBI chr14:34,411,061...34,503,336
Ensembl chr14:34,410,734...34,503,341
JBrowse link
G Fmn1 formin 1 acts_upstream_of_or_within IMP (MGI:3717025|PMID:17554679) MGI PMID:17554679 MGI:3717025 NCBI chr 2:113,327,664...113,716,768
Ensembl chr 2:113,327,736...113,716,767
JBrowse link
G Gdf5 growth differentiation factor 5 acts_upstream_of_or_within IMP (MGI:65616|PMID:8145850)
(MGI:3722565|PMID:17085896)
MGI PMID:8145850 PMID:17085896 MGI:3722565 MGI:65616 NCBI chr 2:155,941,023...155,945,367
Ensembl chr 2:155,941,023...155,945,367
JBrowse link
G Hotair HOX transcript antisense RNA (non-protein coding) acts_upstream_of_or_within
involved_in
IMP (MGI:5788088|PMID:25909911) MGI PMID:25909911 MGI:5788088 NCBI chr15:102,944,062...102,947,946
Ensembl chr15:102,944,062...102,947,730
JBrowse link
G Hottip Hoxa distal transcript antisense RNA acts_upstream_of_or_within
involved_in
IMP (MGI:5788088|PMID:25909911) MGI PMID:25909911 MGI:5788088 NCBI chr 6:52,262,775...52,267,603
Ensembl chr 6:52,262,775...52,267,603
JBrowse link
G Hoxd10 homeobox D10 acts_upstream_of_or_within IGI (MGI:1350864|PMID:10642795) MGI PMID:10642795 MGI:1350864 NCBI chr 2:74,684,273...74,695,106
Ensembl chr 2:74,691,924...74,695,105
JBrowse link
G Hoxd9 homeobox D9 acts_upstream_of_or_within IGI (MGI:1350864|PMID:10642795) MGI PMID:10642795 MGI:1350864 NCBI chr 2:74,697,763...74,700,208
Ensembl chr 2:74,697,727...74,700,208
JBrowse link
G Pitx1 paired-like homeodomain transcription factor 1 acts_upstream_of_or_within IDA
IMP
(MGI:3527352|PMID:15621531), (MGI:3689784|PMID:16989801)
(MGI:1332284|PMID:10049363)
(MGI:1333095|PMID:10101115)
MGI PMID:10049363 PMID:10101115 PMID:15621531 PMID:16989801 MGI:1332284 MGI:1333095 MGI:3527352 MGI:3689784 NCBI chr13:55,825,044...55,836,190
Ensembl chr13:55,825,051...55,836,192
JBrowse link
G Ptch1 patched 1 acts_upstream_of_or_within IMP (MGI:1095757|PMID:9262482) MGI PMID:9262482 MGI:1095757 NCBI chr13:63,508,328...63,573,460
Ensembl chr13:63,508,328...63,573,598
JBrowse link
G Sall1 spalt like transcription factor 1 acts_upstream_of_or_within IGI (MGI:3829797|PMID:19168674) MGI PMID:19168674 MGI:3829797 NCBI chr 8:89,027,242...89,044,162
Ensembl chr 8:89,027,235...89,044,162
JBrowse link
G Sall3 spalt like transcription factor 3 acts_upstream_of_or_within IGI (MGI:3829797|PMID:19168674) MGI PMID:19168674 MGI:3829797 NCBI chr18:80,966,989...80,987,021
Ensembl chr18:80,966,376...80,986,771
JBrowse link
G Tfap2b transcription factor AP-2 beta involved_in IMP (MGI:5287515|PMID:21829553) UniProt PMID:21829553 MGI:5287515 NCBI chr 1:19,208,908...19,238,845
Ensembl chr 1:19,208,914...19,238,576
JBrowse link
G Twist1 twist basic helix-loop-helix transcription factor 1 acts_upstream_of_or_within IMP (MGI:1353858|PMID:10700192) MGI PMID:10700192 MGI:1353858 NCBI chr12:33,957,671...33,959,831
Ensembl chr12:33,957,671...33,959,829
JBrowse link
G Wnt7a wingless-type MMTV integration site family, member 7A acts_upstream_of_or_within IMP MGI MGI:48652 NCBI chr 6:91,363,981...91,411,353
Ensembl chr 6:91,363,981...91,411,363
JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 acts_upstream_of_or_within IMP (MGI:1859075|PMID:10835630) MGI PMID:10835630 MGI:1859075 NCBI chr 9:48,651,797...48,836,225
Ensembl chr 9:48,654,297...48,836,222
JBrowse link
limb bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col2a1 collagen, type II, alpha 1 acts_upstream_of_or_within IEP (PMID:20940257) UniProt PMID:20940257 NCBI chr15:97,975,602...98,004,724
Ensembl chr15:97,975,602...98,004,695
JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within IMP (MGI:1309706|PMID:9784490) MGI PMID:9784490 MGI:1309706 NCBI chr13:118,714,699...118,792,573
Ensembl chr13:118,669,791...118,792,115
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within IMP (MGI:1197797|PMID:9435295)
(MGI:1346744|PMID:10518547)
MGI PMID:9435295 PMID:10518547 MGI:1197797 MGI:1346744 NCBI chr 7:130,162,451...130,266,808
Ensembl chr 7:130,162,451...133,123,350
JBrowse link
G Plxna2 plexin A2 acts_upstream_of_or_within IEP (PMID:19666519) BHF-UCL PMID:19666519 NCBI chr 1:194,619,791...194,816,869
Ensembl chr 1:194,618,218...194,816,869
JBrowse link
G Sema3c sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C acts_upstream_of_or_within IEP (PMID:19666519) BHF-UCL PMID:19666519 NCBI chr 5:17,574,816...17,730,268
Ensembl chr 5:17,574,281...17,730,268
JBrowse link
G Shh sonic hedgehog acts_upstream_of_or_within IMP (MGI:1928592|PMID:11118883) MGI PMID:11118883 MGI:1928592 NCBI chr 5:28,456,840...28,467,101
Ensembl chr 5:28,456,815...28,467,256
JBrowse link
G Sox11 SRY (sex determining region Y)-box 11 involved_in IMP (MGI:5285157|PMID:20596238) UniProt PMID:20596238 MGI:5285157 NCBI chr12:27,334,268...27,342,718
Ensembl chr12:27,334,264...27,342,574
JBrowse link
G Sox4 SRY (sex determining region Y)-box 4 involved_in IMP (MGI:5285157|PMID:20596238) UniProt PMID:20596238 MGI:5285157 NCBI chr13:28,948,919...28,953,699
Ensembl chr13:28,948,919...28,953,713
JBrowse link
G Sox9 SRY (sex determining region Y)-box 9 acts_upstream_of_or_within IEP (PMID:20940257) UniProt PMID:20940257 NCBI chr11:112,782,210...112,787,757
Ensembl chr11:112,782,224...112,787,760
JBrowse link
G Wnt3 wingless-type MMTV integration site family, member 3 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:103,774,175...103,818,021
Ensembl chr11:103,774,150...103,817,957
JBrowse link
G Zfp219 zinc finger protein 219 acts_upstream_of_or_within IEP (PMID:20940257) UniProt PMID:20940257 NCBI chr14:52,006,075...52,021,140
Ensembl chr14:52,006,077...52,020,733
JBrowse link
limb joint morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col3a1 collagen, type III, alpha 1 involved_in IMP (MGI:6405577|PMID:31655293) MGI PMID:31655293 MGI:6405577 NCBI chr 1:45,311,538...45,349,706
Ensembl chr 1:45,311,538...45,349,706
JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within IMP (MGI:4834113|PMID:20404326) MGI PMID:20404326 MGI:4834113 NCBI chr15:53,068,261...53,346,183
Ensembl chr15:53,064,038...53,346,159
JBrowse link
limb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alx4 aristaless-like homeobox 4 acts_upstream_of_or_within IGI
IMP
(MGI:1314705|PMID:9847249)
(MGI:1098911|PMID:9374397), (MGI:1314705|PMID:9847249)
MGI PMID:9374397 PMID:9847249 MGI:1098911 MGI:1314705 NCBI chr 2:93,642,434...93,681,341
Ensembl chr 2:93,642,384...93,681,339
JBrowse link
G Asph aspartate-beta-hydroxylase acts_upstream_of_or_within IMP (MGI:2177999|PMID:11773073) MGI PMID:11773073 MGI:2177999 NCBI chr 4:9,449,085...9,669,344
Ensembl chr 4:9,448,069...9,669,344
JBrowse link
G Bak1 BCL2-antagonist/killer 1 acts_upstream_of_or_within IGI (MGI:1929371|PMID:11163212) MGI PMID:11163212 MGI:1929371 NCBI chr17:27,019,812...27,028,627
Ensembl chr17:27,019,810...27,029,009
JBrowse link
G Bax BCL2-associated X protein acts_upstream_of_or_within IGI (MGI:1929371|PMID:11163212) MGI PMID:11163212 MGI:1929371 NCBI chr 7:45,461,695...45,466,903
Ensembl chr 7:45,461,697...45,466,898
JBrowse link
G Cibar1 CBY1 interacting BAR domain containing 1 involved_in IMP
ISO
(MGI:6304712|PMID:30395363) UniProt
MGI
PMID:30395363 GO_REF:0000096 MGI:4834177 MGI:6304712 NCBI chr 4:12,153,142...12,172,023
Ensembl chr 4:12,153,409...12,172,015
JBrowse link
G Col2a1 collagen, type II, alpha 1 acts_upstream_of_or_within IMP (MGI:1334159|PMID:10100048) MGI PMID:10100048 MGI:1334159 NCBI chr15:97,975,602...98,004,724
Ensembl chr15:97,975,602...98,004,695
JBrowse link
G Evx2 even-skipped homeobox 2 acts_upstream_of_or_within IGI
IMP
(MGI:84613|PMID:8978698) MGI PMID:8978698 MGI:84613 NCBI chr 2:74,652,989...74,661,520
Ensembl chr 2:74,652,991...74,659,557
JBrowse link
G Fbn2 fibrillin 2 acts_upstream_of_or_within IMP (MGI:1353858|PMID:10700192) MGI PMID:10700192 MGI:1353858 NCBI chr18:58,008,623...58,210,572
Ensembl chr18:58,008,623...58,210,487
JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within IMP (MGI:1327513|PMID:9916808) MGI PMID:9916808 MGI:1327513 NCBI chr13:118,714,699...118,792,573
Ensembl chr13:118,669,791...118,792,115
JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within
involved_in
IGI
IBA
(MGI:3056042|PMID:15328019)
(MGI:6201960|PMID:21873635)
MGI
GO_Central
PMID:15328019 PMID:21873635 MGI:3056042 MGI:6201960 NCBI chr19:45,736,491...45,742,941
Ensembl chr19:45,736,798...45,742,915
JBrowse link
G Flvcr1 feline leukemia virus subgroup C cellular receptor 1 acts_upstream_of_or_within IMP (MGI:3775000|PMID:18258918) MGI PMID:18258918 MGI:3775000 NCBI chr 1:191,005,832...191,026,190
Ensembl chr 1:191,005,847...191,026,158
JBrowse link
G Gli3 GLI-Kruppel family member GLI3 acts_upstream_of_or_within
involved_in
IMP
ISO
(MGI:1095762|PMID:9268572) MGI PMID:9268572 GO_REF:0000096 MGI:1095762 MGI:4834177 NCBI chr13:15,463,723...15,730,026
Ensembl chr13:15,463,235...15,730,026
JBrowse link
G Hoxd13 homeobox D13 acts_upstream_of_or_within IMP
IGI
(MGI:2150573|PMID:11543619)
(MGI:84613|PMID:8978698)
MGI PMID:8978698 PMID:11543619 MGI:2150573 MGI:84613 NCBI chr 2:74,668,225...74,671,603
Ensembl chr 2:74,668,310...74,671,599
JBrowse link
G Idua iduronidase, alpha-L acts_upstream_of_or_within IMP (MGI:86916|PMID:9097952) MGI PMID:9097952 MGI:86916 NCBI chr 5:108,660,331...108,685,446
Ensembl chr 5:108,660,331...108,684,557
JBrowse link
G Ift140 intraflagellar transport 140 acts_upstream_of_or_within IMP (MGI:5635784|PMID:24009529) MGI PMID:24009529 MGI:5635784 NCBI chr17:25,016,083...25,099,499
Ensembl chr17:25,016,085...25,099,495
JBrowse link
G Iqce IQ motif containing E involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 5:140,662,553...140,702,403
Ensembl chr 5:140,661,827...140,702,378
JBrowse link
G Lmx1b LIM homeobox transcription factor 1 beta acts_upstream_of_or_within IMP (MGI:4461341|PMID:20589901) MGI PMID:20589901 MGI:4461341 NCBI chr 2:33,560,965...33,641,208
Ensembl chr 2:33,560,965...33,640,511
Ensembl chr 2:33,560,965...33,640,511
JBrowse link
G Lrp5 low density lipoprotein receptor-related protein 5 acts_upstream_of_or_within IGI (MGI:3653806|PMID:15537447) MGI PMID:15537447 MGI:3653806 NCBI chr19:3,584,825...3,686,585
Ensembl chr19:3,584,828...3,686,564
JBrowse link
G Lrp6 low density lipoprotein receptor-related protein 6 acts_upstream_of_or_within IMP
IGI
(MGI:3055483|PMID:15469977)
(MGI:3653806|PMID:15537447)
MGI PMID:15469977 PMID:15537447 MGI:3055483 MGI:3653806 NCBI chr 6:134,446,476...134,566,913
Ensembl chr 6:134,446,476...134,566,965
JBrowse link
G Megf8 multiple EGF-like-domains 8 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 7:25,316,738...25,365,917
Ensembl chr 7:25,317,164...25,365,917
JBrowse link
G Pcnt pericentrin (kendrin) acts_upstream_of_or_within IMP (MGI:4438783|PMID:20096683) MGI PMID:20096683 MGI:4438783 NCBI chr10:76,351,254...76,442,912
Ensembl chr10:76,351,263...76,442,786
JBrowse link
G Pcsk5 proprotein convertase subtilisin/kexin type 5 involved_in IMP (MGI:3795695|PMID:18519639) BHF-UCL PMID:18519639 MGI:3795695 NCBI chr19:17,432,314...17,837,712
Ensembl chr19:17,432,319...17,837,632
JBrowse link
G Pkdcc protein kinase domain containing, cytoplasmic acts_upstream_of_or_within IMP (MGI:5013998|PMID:21553379) MGI PMID:21553379 MGI:5013998 NCBI chr17:83,215,283...83,225,069
Ensembl chr17:83,215,292...83,225,070
JBrowse link
G Ptch1 patched 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr13:63,508,328...63,573,460
Ensembl chr13:63,508,328...63,573,598
JBrowse link
G Rpgrip1l Rpgrip1-like acts_upstream_of_or_within IMP (MGI:3716248|PMID:17558409) MGI PMID:17558409 MGI:3716248 NCBI chr 8:91,217,030...91,313,291
Ensembl chr 8:91,217,030...91,313,262
JBrowse link
G Sik3 SIK family kinase 3 acts_upstream_of_or_within IMP (MGI:5316542|PMID:22318228) MGI PMID:22318228 MGI:5316542 NCBI chr 9:46,012,820...46,224,194
Ensembl chr 9:46,012,820...46,224,194
JBrowse link
G Tbx3 T-box 3 acts_upstream_of_or_within IMP (MGI:2653226|PMID:12668638) MGI PMID:12668638 MGI:2653226 NCBI chr 5:119,670,534...119,684,724
Ensembl chr 5:119,670,669...119,684,724
JBrowse link
G Tbx4 T-box 4 involved_in
acts_upstream_of_or_within
ISS
ISO
IDA
(MGI:3696504|PMID:10945475)
(MGI:3527352|PMID:15621531)
UniProt
MGI
PMID:10945475 PMID:15621531 GO_REF:0000096 MGI:3527352 MGI:3696504 MGI:4834177 NCBI chr11:85,886,367...85,916,097
Ensembl chr11:85,886,422...85,916,097
JBrowse link
G Wnt5a wingless-type MMTV integration site family, member 5A acts_upstream_of_or_within IMP (MGI:4413372|PMID:19795512) MGI PMID:19795512 MGI:4413372 NCBI chr14:28,504,543...28,527,448
Ensembl chr14:28,504,750...28,527,448
JBrowse link
post-embryonic forelimb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atrx ATRX, chromatin remodeler acts_upstream_of_or_within IMP (MGI:5568807|PMID:24386478) MGI PMID:24386478 MGI:5568807 NCBI chr  X:105,797,615...105,929,372
Ensembl chr  X:105,797,615...105,929,403
JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in IMP (MGI:6101307|PMID:24770645) MGI PMID:24770645 MGI:6101307 NCBI chr10:24,637,914...24,712,159
Ensembl chr10:24,637,914...24,712,159
JBrowse link
post-embryonic hindlimb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mir23a microRNA 23a acts_upstream_of_or_within IDA (MGI:5516374|PMID:24101522) MGI PMID:24101522 MGI:5516374 NCBI chr 8:84,208,518...84,208,592
Ensembl chr 8:84,208,518...84,208,592
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28615
    developmental process 7145
      anatomical structure morphogenesis 2962
        appendage morphogenesis 176
          antennal morphogenesis + 0
          apical ectodermal ridge formation + 0
          appendage segmentation + 0
          embryonic appendage morphogenesis + 145
          fin morphogenesis + 0
          imaginal disc-derived appendage morphogenesis + 0
          limb morphogenesis + 176
          post-embryonic appendage morphogenesis + 3
Path 2
Term Annotations click to browse term
  biological_process 28615
    developmental process 7145
      anatomical structure development 6528
        multicellular organism development 5880
          appendage development 207
            appendage morphogenesis 176
              antennal morphogenesis + 0
              apical ectodermal ridge formation + 0
              appendage segmentation + 0
              embryonic appendage morphogenesis + 145
              fin morphogenesis + 0
              imaginal disc-derived appendage morphogenesis + 0
              limb morphogenesis + 176
              post-embryonic appendage morphogenesis + 3
paths to the root