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ONTOLOGY REPORT - ANNOTATIONS

Term:axoneme assembly
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Accession:GO:0035082 term browser browse the term
Definition:The assembly and organization of an axoneme, the bundle of microtubules and associated proteins that forms the core of cilia (also called flagella) in eukaryotic cells and is responsible for their movements.
Comment:Note that cilia and eukaryotic flagella are deemed to be equivalent.
Synonyms:exact_synonym: ciliary axoneme assembly;   cilium axoneme assembly;   flagellar axoneme assembly;   flagellum axoneme assembly
 related_synonym: axoneme biogenesis;   cilium axoneme biogenesis
 alt_id: GO:0035083;   GO:0035084


show annotations for term's descendants           Sort by:
axoneme assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AK7 adenylate kinase 7 acts_upstream_of_or_within ISO (PMID:18776131) MGI PMID:18776131 NCBI chr 7:117,609,791...117,667,247
Ensembl chr 7:117,609,840...117,667,455 		JBrowse link
G CC2D2A coiled-coil and C2 domain containing 2A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24947469) Ensembl
MGI		 PMID:24947469 GO_REF:0000107 NCBI chr 8:10,779,206...10,898,189
Ensembl chr 8:10,779,334...10,898,190 		JBrowse link
G CCDC40 coiled-coil domain 40 molecular ruler complex subunit involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:26387594) InterPro
MGI
TreeGrafter
GO_Central		 PMID:26387594 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr12:2,341,953...2,384,066
Ensembl chr12:2,341,957...2,384,025 		JBrowse link
G CFAP46 cilia and flagella associated protein 46 involved_in IEA InterPro GO_REF:0000002 NCBI chr14:140,916,089...141,002,805
Ensembl chr14:140,916,092...141,002,708 		JBrowse link
G CLUAP1 clusterin associated protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23742838) Ensembl
MGI		 PMID:23742838 GO_REF:0000107 NCBI chr 3:38,716,562...38,753,743
Ensembl chr 3:38,716,431...38,753,748 		JBrowse link
G CPLANE2 ciliogenesis and planar polarity effector complex subunit 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:29038301) Ensembl
MGI		 PMID:29038301 GO_REF:0000107 NCBI chr 6:75,345,153...75,350,544
Ensembl chr 6:75,345,259...75,349,943 		JBrowse link
G DCLK1 doublecortin like kinase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr11:11,815,258...12,159,085
Ensembl chr11:11,815,357...12,158,826 		JBrowse link
G DCLK2 doublecortin like kinase 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:78,680,241...78,854,909
Ensembl chr 8:78,681,415...78,854,848 		JBrowse link
G DCX doublecortin involved_in IEA InterPro GO_REF:0000002 NCBI chr  X:91,317,671...91,644,572
Ensembl chr  X:91,323,764...91,644,567 		JBrowse link
G DNAAF1 dynein axonemal assembly factor 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:4,457,283...4,483,641
Ensembl chr 6:4,457,291...4,479,828 		JBrowse link
G DRC1 dynein regulatory complex subunit 1 acts_upstream_of_or_within ISO (PMID:34169321) MGI PMID:34169321 NCBI chr 3:112,581,765...112,621,664
Ensembl chr 3:112,581,779...112,621,623 		JBrowse link
G FOXJ1 forkhead box J1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:5,307,370...5,312,117
Ensembl chr12:5,307,374...5,312,106 		JBrowse link
G GAS8 growth arrest specific 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27472056) Ensembl
MGI		 PMID:27472056 GO_REF:0000107 NCBI chr 6:86,817...105,987
Ensembl chr 6:64,714...105,993 		JBrowse link
G HOATZ HOATZ cilia and flagella associated protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:39,278,888...39,304,816
Ensembl chr 9:39,276,995...39,304,804 		JBrowse link
G IFT56 intraflagellar transport 56 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:10,462,670...10,509,595
Ensembl chr18:10,462,669...10,509,565 		JBrowse link
G JHY junctional cadherin complex regulator involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:23906841) Ensembl
MGI
TreeGrafter
GO_Central		 PMID:23906841 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:49,826,428...49,887,758
Ensembl chr 9:49,826,501...49,888,860 		JBrowse link
G LRGUK leucine rich repeats and guanylate kinase domain containing involved_in ISO (MGI:5645720|PMID:25781171) UniProt PMID:25781171 MGI:5645720 NCBI chr18:14,957,257...15,074,978
Ensembl chr18:14,957,509...15,071,876 		JBrowse link
G LRRC43 leucine rich repeat containing 43 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:30,520,075...30,546,691
Ensembl chr14:30,524,232...30,546,816 		JBrowse link
G OFD1 OFD1 centriole and centriolar satellite protein acts_upstream_of_or_within ISO (PMID:16311594) MGI PMID:16311594 NCBI chr  X:10,361,403...10,415,502 JBrowse link
G PIERCE1 piercer of microtubule wall 1 involved_in IEA InterPro GO_REF:0000002
G PIERCE2 piercer of microtubule wall 2 involved_in IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chr 1:116,435,725...116,448,887
Ensembl chr 1:116,435,820...116,448,972 		JBrowse link
G RP1 RP1 axonemal microtubule associated involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:76,724,604...76,730,264
Ensembl chr 4:76,724,604...76,734,610 		JBrowse link
G RSPH1 radial spoke head component 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr13:205,808,923...205,827,098
Ensembl chr13:205,808,671...205,827,213 		JBrowse link
G RSPH4A radial spoke head component 4A involved_in IEA
IBA		 Ensembl
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:44,964,433...45,004,925
Ensembl chr 1:44,963,886...44,985,202 		JBrowse link
G RSPH6A radial spoke head 6 homolog A involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 6:52,118,695...52,139,183
Ensembl chr 6:52,118,911...52,139,311 		JBrowse link
G RSPH9 radial spoke head component 9 involved_in IEA
IBA		 Ensembl
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:38,624,942...38,641,410
Ensembl chr 7:38,625,656...38,641,408 		JBrowse link
G SPACA9 sperm acrosome associated 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:272,625,701...272,635,406
Ensembl chr 1:272,625,712...272,636,346 		JBrowse link
G SPAG16 sperm associated antigen 16 involved_in IEA
IBA		 Ensembl
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr15:115,809,152...116,760,976
Ensembl chr15:115,809,187...116,761,791 		JBrowse link
G STK36 serine/threonine kinase 36 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:120,719,635...120,747,832
Ensembl chr15:120,719,646...120,754,065 		JBrowse link
G TTLL1 TTL family tubulin polyglutamylase complex subunit L1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20498047) Ensembl
MGI		 PMID:20498047 GO_REF:0000107 NCBI chr 5:5,793,760...5,827,622
Ensembl chr 5:5,793,780...5,827,633 		JBrowse link
G ULK4 unc-51 like kinase 4 acts_upstream_of_or_within ISO (PMID:27445138) MGI PMID:27445138 NCBI chr13:25,207,890...25,751,465
Ensembl chr13:25,209,368...25,751,500 		JBrowse link
axonemal central apparatus assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CFAP91 cilia and flagella associated protein 91 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:140,437,096...140,566,976
Ensembl chr13:140,437,096...140,566,877 		JBrowse link
G DNAJB13 DnaJ heat shock protein family (Hsp40) member B13 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:8,342,207...8,358,617
Ensembl chr 9:8,342,476...8,355,406 		JBrowse link
G HYDIN HYDIN axonemal central pair apparatus protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18250199) TreeGrafter
MGI		 PMID:18250199 GO_REF:0000118 NCBI chr 6:13,895,276...14,307,790 JBrowse link
G RSPH9 radial spoke head component 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:38,624,942...38,641,410
Ensembl chr 7:38,625,656...38,641,408 		JBrowse link
G SPAG17 sperm associated antigen 17 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23418344) Ensembl
TreeGrafter
MGI		 PMID:23418344 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:102,596,465...102,826,213
Ensembl chr 4:102,427,186...102,826,226 		JBrowse link
G SPEF1 sperm flagellar 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:31,934,856...31,938,463
Ensembl chr17:31,934,856...31,938,463 		JBrowse link
axonemal dynein complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCDC103 coiled-coil domain containing 103 involved_in IEA InterPro GO_REF:0000002 NCBI chr12:18,469,705...18,474,316 JBrowse link
G CCDC39 coiled-coil domain 39 molecular ruler complex subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:118,623,787...118,773,205
Ensembl chr13:118,626,330...118,682,281 		JBrowse link
G CCDC40 coiled-coil domain 40 molecular ruler complex subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:2,341,953...2,384,066
Ensembl chr12:2,341,957...2,384,025 		JBrowse link
G CCDC65 coiled-coil domain containing 65 involved_in IEA
IBA		 InterPro
GO_Central
TreeGrafter		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr 5:14,949,864...14,958,967
Ensembl chr 5:14,950,492...14,959,327 		JBrowse link
G DNAAF1 dynein axonemal assembly factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:4,457,283...4,483,641
Ensembl chr 6:4,457,291...4,479,828 		JBrowse link
G DNAAF11 dynein axonemal assembly factor 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:8,531,612...8,605,904
Ensembl chr 4:8,532,739...8,608,582 		JBrowse link
G DNAAF2 dynein axonemal assembly factor 2 involved_in IEA UniProt
TreeGrafter
InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:179,482,189...179,491,136
Ensembl chr 1:179,482,208...179,491,142 		JBrowse link
G DNAAF6 dynein axonemal assembly factor 6 involved_in IEA
IBA		 Ensembl
GO_Central
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr  X:87,658,355...87,696,318
Ensembl chr  X:87,658,360...87,696,315 		JBrowse link
G DNAI4 dynein axonemal intermediate chain 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:145,680,135...145,754,809
Ensembl chr 6:145,680,052...145,768,488 		JBrowse link
G DRC1 dynein regulatory complex subunit 1 involved_in IEA
IBA		 InterPro
GO_Central
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:112,581,765...112,621,664
Ensembl chr 3:112,581,779...112,621,623 		JBrowse link
G POLE2 DNA polymerase epsilon 2, accessory subunit involved_in IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chr 1:179,495,278...179,529,891
Ensembl chr 1:179,495,214...179,529,896 		JBrowse link
G SPAG1 sperm associated antigen 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 4:36,746,798...36,844,662
Ensembl chr 4:36,746,801...36,844,512 		JBrowse link
G TNNI3 troponin I3, cardiac type involved_in IEA
IBA		 InterPro
GO_Central
Ensembl		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:59,366,828...59,377,490
Ensembl chr 6:59,371,080...59,377,734
Ensembl chr 6:59,371,080...59,377,734 		JBrowse link
G TTC12 tetratricopeptide repeat domain 12 involved_in IEA
IBA		 Ensembl
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:40,988,881...41,032,928
Ensembl chr 9:40,988,920...41,046,900 		JBrowse link
inner dynein arm assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCDC103 coiled-coil domain containing 103 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:18,469,705...18,474,316 JBrowse link
G CCDC39 coiled-coil domain 39 molecular ruler complex subunit involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:29317443)
(PMID:23255504)		 Ensembl
MGI
GO_Central
TreeGrafter
SYSCILIA_CCNET
InterPro		 PMID:23255504 PMID:29317443 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr13:118,623,787...118,773,205
Ensembl chr13:118,626,330...118,682,281 		JBrowse link
G CCDC40 coiled-coil domain 40 molecular ruler complex subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23255504) Ensembl
SYSCILIA_CCNET		 PMID:23255504 GO_REF:0000107 NCBI chr12:2,341,953...2,384,066
Ensembl chr12:2,341,957...2,384,025 		JBrowse link
G DNAAF1 dynein axonemal assembly factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:4,457,283...4,483,641
Ensembl chr 6:4,457,291...4,479,828 		JBrowse link
G DNAAF11 dynein axonemal assembly factor 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:8,531,612...8,605,904
Ensembl chr 4:8,532,739...8,608,582 		JBrowse link
G DNAAF2 dynein axonemal assembly factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23525783) Ensembl
MGI		 PMID:23525783 GO_REF:0000107 NCBI chr 1:179,482,189...179,491,136
Ensembl chr 1:179,482,208...179,491,142 		JBrowse link
G DNAAF4 dynein axonemal assembly factor 4 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:116,331,217...116,431,673
Ensembl chr 1:116,332,630...116,430,984 		JBrowse link
G DNAAF5 dynein axonemal assembly factor 5 involved_in IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:424,514...462,297
Ensembl chr 3:417,324...461,817 		JBrowse link
G DNAAF6 dynein axonemal assembly factor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:87,658,355...87,696,318
Ensembl chr  X:87,658,360...87,696,315 		JBrowse link
G DNAH1 dynein axonemal heavy chain 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24360805) Ensembl
SYSCILIA_CCNET		 PMID:24360805 GO_REF:0000107 NCBI chr13:34,455,154...34,544,147
Ensembl chr13:34,445,498...34,544,148 		JBrowse link
G DNAH2 dynein axonemal heavy chain 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:52,982,217...53,086,744
Ensembl chr12:52,992,843...53,086,744 		JBrowse link
G DNAH7 dynein axonemal heavy chain 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11877439) Ensembl
SYSCILIA_CCNET		 PMID:11877439 GO_REF:0000107 NCBI chr15:99,722,278...99,987,348
Ensembl chr15:99,724,828...99,987,005 		JBrowse link
G DNAI3 dynein axonemal intermediate chain 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 4:130,765,580...130,826,828
Ensembl chr 4:130,765,354...130,826,630 		JBrowse link
G TEKT2 tektin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15340058) Ensembl
MGI		 PMID:15340058 GO_REF:0000107 NCBI chr 6:92,233,479...92,238,125
Ensembl chr 6:92,233,586...92,237,900 		JBrowse link
G ZMYND10 zinc finger MYND-type containing 10 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:29916806) Ensembl
MGI
GO_Central
TreeGrafter		 PMID:29916806 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr13:32,825,398...32,830,037
Ensembl chr13:32,825,374...32,830,049 		JBrowse link
outer dynein arm assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCDC103 coiled-coil domain containing 103 involved_in ISO (PMID:22581229) BHF-UCL PMID:22581229 NCBI chr12:18,469,705...18,474,316 JBrowse link
G CCDC63 coiled-coil domain containing 63 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:32,140,323...32,300,930
Ensembl chr14:32,140,517...32,203,935 		JBrowse link
G CFAP410 cilia and flagella associated protein 410 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr13:207,196,884...207,204,741
Ensembl chr13:207,196,117...207,204,719 		JBrowse link
G DAW1 dynein assembly factor with WD repeats 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28289722) Ensembl
MGI		 PMID:28289722 GO_REF:0000107 NCBI chr15:129,220,060...129,271,449
Ensembl chr15:129,220,190...129,271,241 		JBrowse link
G DNAAF1 dynein axonemal assembly factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:4,457,283...4,483,641
Ensembl chr 6:4,457,291...4,479,828 		JBrowse link
G DNAAF11 dynein axonemal assembly factor 11 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:27353389) Ensembl
MGI
TreeGrafter
GO_Central		 PMID:27353389 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:8,531,612...8,605,904
Ensembl chr 4:8,532,739...8,608,582 		JBrowse link
G DNAAF2 dynein axonemal assembly factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23525783) Ensembl
MGI		 PMID:23525783 GO_REF:0000107 NCBI chr 1:179,482,189...179,491,136
Ensembl chr 1:179,482,208...179,491,142 		JBrowse link
G DNAAF4 dynein axonemal assembly factor 4 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:116,331,217...116,431,673
Ensembl chr 1:116,332,630...116,430,984 		JBrowse link
G DNAAF5 dynein axonemal assembly factor 5 involved_in IEA
IBA		 Ensembl
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:424,514...462,297
Ensembl chr 3:417,324...461,817 		JBrowse link
G DNAAF6 dynein axonemal assembly factor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:87,658,355...87,696,318
Ensembl chr  X:87,658,360...87,696,315 		JBrowse link
G DNAH17 dynein axonemal heavy chain 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:3,485,166...3,590,325
Ensembl chr12:3,482,650...3,591,132 		JBrowse link
G DNAH5 dynein axonemal heavy chain 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11062149), (PMID:11788826), (PMID:15750039), (PMID:16627867), (PMID:18950741), (PMID:22499950), (PMID:23261302) Ensembl
SYSCILIA_CCNET		 PMID:11062149 PMID:11788826 PMID:15750039 PMID:16627867 PMID:18950741 More... GO_REF:0000107 NCBI chr16:3,114,267...3,366,189
Ensembl chr16:3,114,273...3,430,341 		JBrowse link
G DNAI1 dynein axonemal intermediate chain 1 involved_in
acts_upstream_of_or_within		 IEA
IBA
ISO		 (PMID:11231901), (PMID:15750039), (PMID:16858015), (PMID:18950741) Ensembl
GO_Central
TreeGrafter
SYSCILIA_CCNET		 PMID:11231901 PMID:15750039 PMID:16858015 PMID:18950741 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr10:32,275,173...32,355,444
Ensembl chr10:32,275,175...32,355,399 		JBrowse link
G DNAI2 dynein axonemal intermediate chain 2 involved_in
acts_upstream_of_or_within		 IEA
IBA
ISO		 (PMID:18950741), (PMID:23261302) Ensembl
TreeGrafter
GO_Central
SYSCILIA_CCNET		 PMID:18950741 PMID:23261302 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr12:6,808,966...6,832,767
Ensembl chr12:6,809,335...6,832,766 		JBrowse link
G DNAL1 dynein axonemal light chain 1 involved_in IEA
IBA		 Ensembl
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:96,999,526...97,047,102
Ensembl chr 7:96,999,602...97,047,090 		JBrowse link
G NISCH nischarin involved_in IBA GO_Central GO_REF:0000033 NCBI chr13:34,595,788...34,630,306
Ensembl chr13:34,595,782...34,630,303 		JBrowse link
G ODAD1 outer dynein arm docking complex subunit 1 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 6:53,729,915...53,754,508 JBrowse link
G ODAD2 outer dynein arm docking complex subunit 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23849778)
(PMID:23849778), (PMID:24203976)		 Ensembl
MGI
SYSCILIA_CCNET		 PMID:23849778 PMID:24203976 GO_REF:0000107 NCBI chr10:39,276,423...39,463,096
Ensembl chr10:39,274,932...39,462,846 		JBrowse link
G ODAD3 outer dynein arm docking complex subunit 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25192045) InterPro
TreeGrafter
SYSCILIA_CCNET
Ensembl		 PMID:25192045 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:70,088,119...70,097,027
Ensembl chr 2:70,087,887...70,096,924 		JBrowse link
G ODAD3 outer dynein arm docking complex subunit 3 involved_in IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 2:70,073,061...70,087,990
Ensembl chr 2:70,073,067...70,087,796 		JBrowse link
G ODAD4 outer dynein arm docking complex subunit 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27486780) Ensembl
MGI		 PMID:27486780 GO_REF:0000107 NCBI chr12:20,766,088...20,791,527
Ensembl chr12:20,766,884...20,791,476 		JBrowse link
G ZMYND10 zinc finger MYND-type containing 10 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:29916806) Ensembl
MGI
GO_Central
TreeGrafter
UniProt		 PMID:29916806 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr13:32,825,398...32,830,037
Ensembl chr13:32,825,374...32,830,049 		JBrowse link
radial spoke assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RSPH4A radial spoke head component 4A involved_in ISO (MGI:6404703|PMID:32203505) UniProt PMID:32203505 MGI:6404703 NCBI chr 1:44,964,433...45,004,925
Ensembl chr 1:44,963,886...44,985,202 		JBrowse link
G RSPH9 radial spoke head component 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:38,624,942...38,641,410
Ensembl chr 7:38,625,656...38,641,408 		JBrowse link
sperm axoneme assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARMC2 armadillo repeat containing 2 involved_in IEA
IBA		 Ensembl
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:74,923,824...75,081,742
Ensembl chr 1:74,923,868...75,043,060 		JBrowse link
G BBOF1 basal body orientation factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:97,316,630...97,367,526
Ensembl chr 7:97,316,711...97,368,049 		JBrowse link
G BBS2 Bardet-Biedl syndrome 2 acts_upstream_of_or_within ISO (PMID:15539463) MGI PMID:15539463 NCBI chr 6:18,542,383...18,575,338
Ensembl chr 6:18,542,386...18,575,514 		JBrowse link
G CCDC146 coiled-coil domain containing 146 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:102,784,299...102,919,758
Ensembl chr 9:102,787,551...102,919,686 		JBrowse link
G CEP131 centrosomal protein 131 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24415959) Ensembl
MGI		 PMID:24415959 GO_REF:0000107 NCBI chr12:1,537,900...1,556,931
Ensembl chr12:1,538,326...1,556,929 		JBrowse link
G CFAP157 cilia and flagella associated protein 157 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:268,209,190...268,213,909
Ensembl chr 1:268,209,187...268,215,859 		JBrowse link
G CFAP206 cilia and flagella associated protein 206 involved_in IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:55,821,511...55,854,203
Ensembl chr 1:55,821,542...55,854,014 		JBrowse link
G CFAP43 cilia and flagella associated protein 43 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:31884020)
(PMID:29522859)		 Ensembl
MGI
GO_Central
TreeGrafter		 PMID:29522859 PMID:31884020 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr14:115,073,529...115,201,965
Ensembl chr14:115,073,366...115,174,043 		JBrowse link
G CFAP44 cilia and flagella associated protein 44 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:29522859) Ensembl
MGI		 PMID:29522859 GO_REF:0000107 NCBI chr13:146,471,979...146,628,535
Ensembl chr13:146,474,196...146,622,987 		JBrowse link
G CFAP47 cilia and flagella associated protein 47 involved_in ISO (PMID:33472045)
(MGI:6716514|PMID:33472045)		 UniProt PMID:33472045 MGI:6716514 NCBI chr  X:31,879,143...32,331,543 JBrowse link
G CFAP58 cilia and flagella associated protein 58 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:32791035) Ensembl
MGI		 PMID:32791035 GO_REF:0000107 NCBI chr14:115,292,386...115,410,852
Ensembl chr14:115,285,979...115,410,481 		JBrowse link
G CFAP65 cilia and flagella associated protein 65 involved_in IEA
IBA		 Ensembl
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr15:121,026,365...121,067,224
Ensembl chr15:121,026,245...121,062,738 		JBrowse link
G CFAP69 cilia and flagella associated protein 69 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:30415212) MGI
Ensembl		 PMID:30415212 GO_REF:0000107 NCBI chr 9:70,373,422...70,430,383
Ensembl chr 9:70,373,527...70,430,378 		JBrowse link
G CFAP97D1 CFAP97 domain containing 1 involved_in IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr12:19,330,354...19,336,221
Ensembl chr12:19,330,951...19,334,824 		JBrowse link
G DNAH1 dynein axonemal heavy chain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:34,455,154...34,544,147
Ensembl chr13:34,445,498...34,544,148 		JBrowse link
G DRC7 dynein regulatory complex subunit 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:19,603,413...19,629,175
Ensembl chr 6:19,603,399...19,629,172 		JBrowse link
G FSIP2 fibrous sheath interacting protein 2 acts_upstream_of_or_within_positive_effect
involved_in		 ISO
IEA		 (PMID:30137358), (PMID:30745215) UniProt
Ensembl		 PMID:30137358 PMID:30745215 GO_REF:0000107 NCBI chr15:90,902,067...91,000,873
Ensembl chr15:90,901,868...91,001,297 		JBrowse link
G IFT88 intraflagellar transport 88 acts_upstream_of_or_within ISO (PMID:21337470) MGI PMID:21337470 NCBI chr11:943,444...1,025,617
Ensembl chr11:943,469...1,025,613 		JBrowse link
G IQCG IQ motif containing G involved_in IEA
IBA		 Ensembl
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr13:134,540,048...134,588,122
Ensembl chr13:134,536,091...134,584,656 		JBrowse link
G MEIG1 meiosis/spermiogenesis associated 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23258628) Ensembl
MGI		 PMID:23258628 GO_REF:0000107 NCBI chr10:46,771,820...46,800,955
Ensembl chr10:46,786,841...46,800,323 		JBrowse link
G MNS1 meiosis specific nuclear structural 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:115,471,904...115,526,344
Ensembl chr 1:115,471,922...115,553,524 		JBrowse link
G NEURL1 neuralized E3 ubiquitin protein ligase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11585928) Ensembl
MGI		 PMID:11585928 GO_REF:0000107 NCBI chr14:114,436,887...114,515,713
Ensembl chr14:114,437,045...114,516,721 		JBrowse link
G PDCL2 phosducin like 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:36278277) Ensembl
MGI		 PMID:36278277 GO_REF:0000107 NCBI chr 8:54,916,145...54,950,048
Ensembl chr 8:54,917,583...54,950,062 		JBrowse link
G PLA2G3 phospholipase A2 group III involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20424323) Ensembl
MGI		 PMID:20424323 GO_REF:0000107 NCBI chr14:47,923,005...47,928,762
Ensembl chr14:47,923,954...47,928,810 		JBrowse link
G SPAG16 sperm associated antigen 16 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15328412) Ensembl
MGI		 PMID:15328412 GO_REF:0000107 NCBI chr15:115,809,152...116,760,976
Ensembl chr15:115,809,187...116,761,791 		JBrowse link
G SPAG6 sperm associated antigen 6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:52,496,457...52,571,977
Ensembl chr10:52,494,755...52,571,990 		JBrowse link
G SPEF2 sperm flagellar 2 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA
ISS		 (PMID:21715716) Ensembl
MGI
GO_Central
TreeGrafter
UniProt		 PMID:21715716 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr16:21,088,463...21,264,591
Ensembl chr16:21,088,386...21,265,592 		JBrowse link
G TBC1D21 TBC1 domain family member 21 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:59,535,023...59,549,720
Ensembl chr 7:59,535,593...59,548,888 		JBrowse link
G TPGS1 tubulin polyglutamylase complex subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12242242) Ensembl
MGI		 PMID:12242242 GO_REF:0000107 NCBI chr 2:77,776,269...77,783,434
Ensembl chr 2:77,776,277...77,783,416 		JBrowse link
G TTC12 tetratricopeptide repeat domain 12 involved_in IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:40,988,881...41,032,928
Ensembl chr 9:40,988,920...41,046,900 		JBrowse link
G TTLL1 TTL family tubulin polyglutamylase complex subunit L1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20498047)
(PMID:20442420)		 Ensembl
MGI		 PMID:20442420 PMID:20498047 GO_REF:0000107 NCBI chr 5:5,793,760...5,827,622
Ensembl chr 5:5,793,780...5,827,633 		JBrowse link
G TTLL5 tubulin tyrosine ligase like 5 acts_upstream_of_or_within ISO (PMID:23558686) MGI PMID:23558686 NCBI chr 7:98,822,338...99,090,076
Ensembl chr 7:98,823,871...99,130,915 		JBrowse link
G UBE2B ubiquitin conjugating enzyme E2 B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12672659) Ensembl
MGI		 PMID:12672659 GO_REF:0000107 NCBI chr 2:136,652,764...136,667,213
Ensembl chr 2:136,652,785...136,667,949 		JBrowse link
G ZMYND12 zinc finger MYND-type containing 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:168,877,247...168,902,705
Ensembl chr 6:168,877,249...168,902,741 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17799
    cellular process 16838
      cellular component organization or biogenesis 6723
        cellular component biogenesis 3311
          cellular component assembly 3031
            axoneme assembly 99
              axonemal basal plate assembly 0
              axonemal central apparatus assembly 6
              axonemal dynein complex assembly + 36
              axonemal outer doublet assembly 0
              radial spoke assembly 2
              sperm axoneme assembly 34
Path 2
Term Annotations click to browse term
  biological_process 17799
    cellular process 16838
      cellular component organization or biogenesis 6723
        cellular component biogenesis 3311
          cellular component assembly 3031
            cell projection assembly 656
              plasma membrane bounded cell projection assembly 642
                cilium assembly 426
                  axoneme assembly 99
                    axonemal basal plate assembly 0
                    axonemal central apparatus assembly 6
                    axonemal dynein complex assembly + 36
                    axonemal outer doublet assembly 0
                    radial spoke assembly 2
                    sperm axoneme assembly 34
paths to the root