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ONTOLOGY REPORT - ANNOTATIONS


Term:axoneme assembly
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Accession:GO:0035082 term browser browse the term
Definition:The assembly and organization of an axoneme, the bundle of microtubules and associated proteins that forms the core of cilia (also called flagella) in eukaryotic cells and is responsible for their movements.
Comment:Note that cilia and eukaryotic flagella are deemed to be equivalent.
Synonyms:exact_synonym: ciliary axoneme assembly;   cilium axoneme assembly;   flagellar axoneme assembly;   flagellum axoneme assembly
 related_synonym: axoneme biogenesis;   cilium axoneme biogenesis
 alt_id: GO:0035083;   GO:0035084



show annotations for term's descendants           Sort by:
axoneme assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AK7 adenylate kinase 7 acts_upstream_of_or_within ISO (MGI:5430887|PMID:18776131) MGI PMID:18776131 MGI:5430887 NCBI chr 8:65,136,750...65,213,589
Ensembl chr 8:65,136,705...65,213,555
JBrowse link
G C15orf65 chromosome 15 open reading frame 65 involved_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 Ensembl chr30:20,795,966...20,809,490 JBrowse link
G CC2D2A coiled-coil and C2 domain containing 2A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5696765|PMID:24947469) MGI
Ensembl
PMID:24947469 GO_REF:0000107 MGI:5696765 NCBI chr 3:64,731,165...64,867,743
Ensembl chr 3:64,731,171...64,867,547
JBrowse link
G CCDC40 coiled-coil domain 40 molecular ruler complex subunit acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5763712|PMID:26387594) MGI
TreeGrafter
InterPro
PMID:26387594 GO_REF:0000002 GO_REF:0000118 MGI:5763712 NCBI chr 9:1,616,029...1,656,043
Ensembl chr 9:1,601,121...1,656,597
JBrowse link
G CLUAP1 clusterin associated protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5509110|PMID:23742838) MGI
Ensembl
PMID:23742838 GO_REF:0000107 MGI:5509110 NCBI chr 6:37,708,258...37,746,361
Ensembl chr 6:37,708,089...37,746,398
JBrowse link
G CPLANE2 ciliogenesis and planar polarity effector complex subunit 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:6107986|PMID:29038301) MGI
Ensembl
PMID:29038301 GO_REF:0000107 MGI:6107986 NCBI chr 2:81,468,095...81,473,646
Ensembl chr 2:81,469,802...81,473,947
JBrowse link
G DCLK1 doublecortin like kinase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr25:4,441,945...4,783,542
Ensembl chr25:4,345,771...4,778,047
JBrowse link
G DCX doublecortin involved_in IEA InterPro GO_REF:0000002 NCBI chr  X:84,408,762...84,541,157
Ensembl chr  X:84,408,895...84,517,827
JBrowse link
G DRC1 dynein regulatory complex subunit 1 acts_upstream_of_or_within ISO (MGI:6849607|PMID:34169321) MGI PMID:34169321 MGI:6849607 NCBI chr17:20,479,290...20,517,960
Ensembl chr17:20,431,176...20,517,753
JBrowse link
G FOXJ1 forkhead box J1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:4,512,898...4,517,764
Ensembl chr 9:4,513,628...4,517,756
JBrowse link
G GAS8 growth arrest specific 8 acts_upstream_of_or_within
involved_in
ISO (MGI:5789455|PMID:27472056)
(PMID:27120127)
MGI
UniProt
PMID:27120127 PMID:27472056 MGI:5789455 NCBI chr 5:63,589,196...63,609,014
Ensembl chr 5:63,573,941...63,619,476
JBrowse link
G HOATZ HOATZ cilia and flagella associated protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:21,533,859...21,558,543
Ensembl chr 5:21,534,298...21,557,384
JBrowse link
G IFT56 intraflagellar transport 56 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:9,528,236...9,581,089
Ensembl chr16:9,530,445...9,580,839
JBrowse link
G JHY junctional cadherin complex regulator acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5517715|PMID:23906841) MGI
TreeGrafter
Ensembl
PMID:23906841 GO_REF:0000107 GO_REF:0000118 MGI:5517715 NCBI chr 5:11,382,105...11,443,219
Ensembl chr 5:11,384,434...11,443,185
JBrowse link
G LRGUK leucine rich repeats and guanylate kinase domain containing involved_in ISO (MGI:5645720|PMID:25781171) UniProt PMID:25781171 MGI:5645720 NCBI chr14:3,191,324...3,301,306
Ensembl chr14:3,193,813...3,301,293
JBrowse link
G MAD2L1BP MAD2L1 binding protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:12,085,825...12,089,907
Ensembl chr12:12,085,915...12,090,411
JBrowse link
G OFD1 OFD1 centriole and centriolar satellite protein acts_upstream_of_or_within ISO (MGI:3617259|PMID:16311594) MGI PMID:16311594 MGI:3617259 NCBI chr  X:10,140,439...10,194,478
Ensembl chr  X:10,140,067...10,194,472
JBrowse link
G PIERCE1 piercer of microtubule wall 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 9:51,207,491...51,209,955
Ensembl chr 9:51,207,493...51,210,257
JBrowse link
G PIERCE2 piercer of microtubule wall 2 involved_in ISO (MGI:6833916|PMID:34715025) UniProt PMID:34715025 MGI:6833916 NCBI chr30:20,795,024...20,809,659 JBrowse link
G PIERCE2 piercer of microtubule wall 2 involved_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107
G RP1 RP1 axonemal microtubule associated involved_in ISS
IBA
IEA
UniProt
GO_Central
TreeGrafter
Ensembl
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr29:6,079,519...6,136,009
Ensembl chr29:6,079,377...6,136,009
JBrowse link
G RP1L1 RP1 like 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr25:27,317,102...27,332,075
Ensembl chr25:27,325,658...27,330,556
JBrowse link
G RSPH1 radial spoke head component 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr31:36,771,829...36,811,067
Ensembl chr31:36,789,571...36,812,050
JBrowse link
G RSPH4A radial spoke head component 4A involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 1:57,063,752...57,079,289
Ensembl chr 1:57,064,624...57,077,537
JBrowse link
G RSPH6A radial spoke head 6 homolog A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:109,795,813...109,814,590
Ensembl chr 1:109,795,580...109,814,590
JBrowse link
G RSPH9 radial spoke head component 9 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr12:12,093,016...12,105,721
Ensembl chr12:12,096,568...12,105,721
JBrowse link
G SPACA9 sperm acrosome associated 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:51,460,359...51,470,612
Ensembl chr 9:51,460,623...51,468,902
JBrowse link
G SPAG16 sperm associated antigen 16 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr37:20,782,855...21,690,523
Ensembl chr37:20,782,867...21,690,333
JBrowse link
G STK36 serine/threonine kinase 36 involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:25,273,237...25,297,794
Ensembl chr37:25,273,110...25,340,512
JBrowse link
G TTLL1 TTL family tubulin polyglutamylase complex subunit L1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4457964|PMID:20498047) MGI
Ensembl
PMID:20498047 GO_REF:0000107 MGI:4457964 NCBI chr10:22,456,150...22,492,375
Ensembl chr10:22,456,146...22,488,505
JBrowse link
G ULK4 unc-51 like kinase 4 acts_upstream_of_or_within ISO (MGI:5790513|PMID:27445138) MGI PMID:27445138 MGI:5790513 NCBI chr23:10,578,391...11,176,543
Ensembl chr23:10,578,429...11,176,545
JBrowse link
axonemal central apparatus assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CFAP91 cilia and flagella associated protein 91 involved_in IEA Ensembl GO_REF:0000107 NCBI chr33:23,315,184...23,447,307
Ensembl chr33:23,313,821...23,415,660
JBrowse link
G DNAJB13 DnaJ heat shock protein family (Hsp40) member B13 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:24,314,242...24,326,605
Ensembl chr21:24,314,248...24,338,253
JBrowse link
G HYDIN HYDIN axonemal central pair apparatus protein acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3793384|PMID:18250199) MGI
Ensembl
TreeGrafter
PMID:18250199 GO_REF:0000107 GO_REF:0000118 MGI:3793384 NCBI chr 5:76,743,872...77,104,888
Ensembl chr 5:76,743,972...77,045,455
JBrowse link
G RSPH9 radial spoke head component 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:12,093,016...12,105,721
Ensembl chr12:12,096,568...12,105,721
JBrowse link
G SPAG17 sperm associated antigen 17 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5576118|PMID:23418344) MGI
Ensembl
TreeGrafter
PMID:23418344 GO_REF:0000107 GO_REF:0000118 MGI:5576118 NCBI chr17:55,248,136...55,468,036
Ensembl chr17:55,248,137...55,467,902
JBrowse link
G SPEF1 sperm flagellar 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:17,572,457...17,580,006
Ensembl chr24:17,574,741...17,578,439
JBrowse link
axonemal dynein complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCDC103 coiled-coil domain containing 103 involved_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chr 9:18,581,544...18,585,939
Ensembl chr 9:18,582,468...18,584,612
JBrowse link
G CCDC39 coiled-coil domain 39 molecular ruler complex subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:13,915,763...13,959,574
Ensembl chr34:13,905,434...13,959,340
JBrowse link
G CCDC40 coiled-coil domain 40 molecular ruler complex subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:1,616,029...1,656,043
Ensembl chr 9:1,601,121...1,656,597
JBrowse link
G CCDC65 coiled-coil domain containing 65 involved_in IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chr27:5,639,886...5,650,140
Ensembl chr27:5,639,893...5,650,109
JBrowse link
G CFAP57 cilia and flagella associated protein 57 acts_upstream_of_or_within ISO (MGI:7441375|PMID:36752199) MGI PMID:36752199 MGI:7441375 NCBI chr15:16,903,470...16,977,825
Ensembl chr15:16,903,470...16,977,408
JBrowse link
G DNAAF1 dynein axonemal assembly factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:68,184,532...68,205,651
Ensembl chr 5:68,184,532...68,205,656
JBrowse link
G DNAAF11 dynein axonemal assembly factor 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:29,128,500...29,199,354
Ensembl chr13:29,128,504...29,199,323
JBrowse link
G DNAAF2 dynein axonemal assembly factor 2 involved_in IEA UniProt
TreeGrafter
Ensembl
InterPro
GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:26,249,000...26,256,439 JBrowse link
G DNAAF3 dynein axonemal assembly factor 3 involved_in IEA InterPro
TreeGrafter
Ensembl
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:102,468,377...102,474,615
Ensembl chr 1:102,468,629...102,475,172
JBrowse link
G DNAAF6 dynein axonemal assembly factor 6 involved_in IEA InterPro
Ensembl
TreeGrafter
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr  X:80,783,424...80,825,791
Ensembl chr  X:80,784,080...80,825,809
JBrowse link
G DNAI4 dynein axonemal intermediate chain 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:43,590,200...43,690,293
Ensembl chr 5:43,590,239...43,689,339
JBrowse link
G DRC1 dynein regulatory complex subunit 1 involved_in IEA InterPro
TreeGrafter
Ensembl
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr17:20,479,290...20,517,960
Ensembl chr17:20,431,176...20,517,753
JBrowse link
G POLE2 DNA polymerase epsilon 2, accessory subunit involved_in ISO (PMID:19052621) UniProt PMID:19052621 NCBI chr 8:26,264,220...26,295,089
Ensembl chr 8:26,251,160...26,295,317
JBrowse link
G SPAG1 sperm associated antigen 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr13:2,065,726...2,127,199 JBrowse link
G TTC12 tetratricopeptide repeat domain 12 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 5:19,829,873...19,874,934
Ensembl chr 5:19,829,874...19,873,145
JBrowse link
inner dynein arm assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCDC103 coiled-coil domain containing 103 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 9:18,581,544...18,585,939
Ensembl chr 9:18,582,468...18,584,612
JBrowse link
G CCDC39 coiled-coil domain 39 molecular ruler complex subunit involved_in
acts_upstream_of_or_within
IEA
IBA
ISO
(PMID:23255504)
(MGI:6111002|PMID:29317443)
InterPro
TreeGrafter
GO_Central
SYSCILIA_CCNET
Ensembl
MGI
PMID:23255504 PMID:29317443 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:6111002 NCBI chr34:13,915,763...13,959,574
Ensembl chr34:13,905,434...13,959,340
JBrowse link
G CCDC40 coiled-coil domain 40 molecular ruler complex subunit involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23255504) Ensembl
SYSCILIA_CCNET
PMID:23255504 GO_REF:0000107 NCBI chr 9:1,616,029...1,656,043
Ensembl chr 9:1,601,121...1,656,597
JBrowse link
G DNAAF1 dynein axonemal assembly factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:68,184,532...68,205,651
Ensembl chr 5:68,184,532...68,205,656
JBrowse link
G DNAAF11 dynein axonemal assembly factor 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:29,128,500...29,199,354
Ensembl chr13:29,128,504...29,199,323
JBrowse link
G DNAAF2 dynein axonemal assembly factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:26,249,000...26,256,439 JBrowse link
G DNAAF4 dynein axonemal assembly factor 4 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr30:20,778,497...20,871,304
Ensembl chr30:20,815,775...20,871,220
JBrowse link
G DNAAF5 dynein axonemal assembly factor 5 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 6:16,075,099...16,121,917
Ensembl chr 6:16,075,364...16,121,917
JBrowse link
G DNAAF6 dynein axonemal assembly factor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:80,783,424...80,825,791
Ensembl chr  X:80,784,080...80,825,809
JBrowse link
G DNAH1 dynein axonemal heavy chain 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24360805) Ensembl
SYSCILIA_CCNET
PMID:24360805 GO_REF:0000107 NCBI chr20:37,364,836...37,441,486
Ensembl chr20:37,364,842...37,465,807
JBrowse link
G DNAH2 dynein axonemal heavy chain 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:32,600,902...32,688,560
Ensembl chr 5:32,602,553...32,688,559
JBrowse link
G DNAH7 dynein axonemal heavy chain 7 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11877439) Ensembl
SYSCILIA_CCNET
PMID:11877439 GO_REF:0000107 NCBI chr37:5,521,106...5,760,383
Ensembl chr37:5,521,147...5,760,277
JBrowse link
G DNAI3 dynein axonemal intermediate chain 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:62,832,281...62,914,239
Ensembl chr 6:62,844,626...62,914,196
JBrowse link
G POLE2 DNA polymerase epsilon 2, accessory subunit acts_upstream_of_or_within ISO (MGI:5514194|PMID:23525783) MGI PMID:23525783 MGI:5514194 NCBI chr 8:26,264,220...26,295,089
Ensembl chr 8:26,251,160...26,295,317
JBrowse link
G TEKT2 tektin 2 acts_upstream_of_or_within ISO (MGI:3054498|PMID:15340058) MGI PMID:15340058 MGI:3054498 NCBI chr15:6,122,855...6,126,411
Ensembl chr15:6,122,859...6,126,617
JBrowse link
G ZMYND10 zinc finger MYND-type containing 10 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:6284218|PMID:29916806) MGI
TreeGrafter
Ensembl
PMID:29916806 GO_REF:0000107 GO_REF:0000118 MGI:6284218 NCBI chr20:39,009,838...39,014,357
Ensembl chr20:39,010,225...39,014,356
JBrowse link
outer dynein arm assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCDC103 coiled-coil domain containing 103 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:18,581,544...18,585,939
Ensembl chr 9:18,582,468...18,584,612
JBrowse link
G CCDC63 coiled-coil domain containing 63 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr26:8,587,306...8,623,558
Ensembl chr26:8,587,784...8,652,946
JBrowse link
G CFAP410 cilia and flagella associated protein 410 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr31:38,183,181...38,192,739
Ensembl chr31:38,183,188...38,196,113
JBrowse link
G DAW1 dynein assembly factor with WD repeats 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:6161988|PMID:28289722) MGI
Ensembl
PMID:28289722 GO_REF:0000107 MGI:6161988 NCBI chr25:40,548,579...40,594,286
Ensembl chr25:40,548,634...40,594,244
JBrowse link
G DNAAF1 dynein axonemal assembly factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:68,184,532...68,205,651
Ensembl chr 5:68,184,532...68,205,656
JBrowse link
G DNAAF11 dynein axonemal assembly factor 11 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:6147712|PMID:27353389) MGI
TreeGrafter
Ensembl
PMID:27353389 GO_REF:0000107 GO_REF:0000118 MGI:6147712 NCBI chr13:29,128,500...29,199,354
Ensembl chr13:29,128,504...29,199,323
JBrowse link
G DNAAF2 dynein axonemal assembly factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:26,249,000...26,256,439 JBrowse link
G DNAAF4 dynein axonemal assembly factor 4 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr30:20,778,497...20,871,304
Ensembl chr30:20,815,775...20,871,220
JBrowse link
G DNAAF5 dynein axonemal assembly factor 5 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 6:16,075,099...16,121,917
Ensembl chr 6:16,075,364...16,121,917
JBrowse link
G DNAAF6 dynein axonemal assembly factor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:80,783,424...80,825,791
Ensembl chr  X:80,784,080...80,825,809
JBrowse link
G DNAH17 dynein axonemal heavy chain 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:2,713,236...2,809,101
Ensembl chr 9:2,715,077...2,809,101
JBrowse link
G DNAH5 dynein axonemal heavy chain 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11062149), (PMID:11788826), (PMID:15750039), (PMID:16627867), (PMID:18950741), (PMID:22499950), (PMID:23261302) Ensembl
SYSCILIA_CCNET
PMID:11062149 PMID:11788826 PMID:15750039 PMID:16627867 PMID:18950741 More... GO_REF:0000107 NCBI chr34:816,088...1,040,052
Ensembl chr34:805,455...1,038,273
JBrowse link
G DNAI1 dynein axonemal intermediate chain 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11231901), (PMID:15750039), (PMID:16858015), (PMID:18950741) Ensembl
TreeGrafter
SYSCILIA_CCNET
PMID:11231901 PMID:15750039 PMID:16858015 PMID:18950741 GO_REF:0000107 GO_REF:0000118 NCBI chr11:51,080,080...51,205,381
Ensembl chr11:51,106,370...51,237,467
JBrowse link
G DNAI2 dynein axonemal intermediate chain 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18950741), (PMID:23261302) Ensembl
TreeGrafter
SYSCILIA_CCNET
PMID:18950741 PMID:23261302 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:6,085,021...6,114,187
Ensembl chr 9:6,085,459...6,114,351
JBrowse link
G DNAL1 dynein axonemal light chain 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 8:46,924,284...46,964,249
Ensembl chr 8:46,924,395...46,963,227
JBrowse link
G ICOSLG inducible T cell costimulator ligand involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr31:38,084,861...38,094,743 JBrowse link
G LOC607539 armadillo repeat-containing protein 4-like acts_upstream_of_or_within ISO (MGI:5551687|PMID:23849778)
(PMID:23849778), (PMID:24203976)
MGI
SYSCILIA_CCNET
PMID:23849778 PMID:24203976 MGI:5551687 NCBI chr 2:4,769,681...5,037,592 JBrowse link
G ODAD1 outer dynein arm docking complex subunit 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:107,910,313...107,936,963
Ensembl chr 1:107,905,070...107,936,963
JBrowse link
G ODAD3 outer dynein arm docking complex subunit 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:25192045) InterPro
TreeGrafter
SYSCILIA_CCNET
Ensembl
PMID:25192045 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr20:49,917,183...49,926,417
Ensembl chr20:49,917,350...49,926,424
JBrowse link
G ODAD4 outer dynein arm docking complex subunit 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5913140|PMID:27486780) MGI
Ensembl
PMID:27486780 GO_REF:0000107 MGI:5913140 NCBI chr 9:20,897,814...20,921,182
Ensembl chr 9:20,897,976...20,921,441
JBrowse link
G POLE2 DNA polymerase epsilon 2, accessory subunit acts_upstream_of_or_within ISO (MGI:5514194|PMID:23525783) MGI PMID:23525783 MGI:5514194 NCBI chr 8:26,264,220...26,295,089
Ensembl chr 8:26,251,160...26,295,317
JBrowse link
G ZMYND10 zinc finger MYND-type containing 10 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:6284218|PMID:29916806) MGI
TreeGrafter
UniProt
Ensembl
PMID:29916806 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 MGI:6284218 NCBI chr20:39,009,838...39,014,357
Ensembl chr20:39,010,225...39,014,356
JBrowse link
radial spoke assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RSPH4A radial spoke head component 4A involved_in ISO (MGI:6404703|PMID:32203505) UniProt PMID:32203505 MGI:6404703 NCBI chr 1:57,063,752...57,079,289
Ensembl chr 1:57,064,624...57,077,537
JBrowse link
G RSPH9 radial spoke head component 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:12,093,016...12,105,721
Ensembl chr12:12,096,568...12,105,721
JBrowse link
sperm axoneme assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARMC2 armadillo repeat containing 2 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr12:65,829,110...65,933,378
Ensembl chr12:65,824,672...65,933,098
JBrowse link
G BBOF1 basal body orientation factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:47,245,995...47,286,650
Ensembl chr 8:47,246,126...47,285,518
JBrowse link
G BBS2 Bardet-Biedl syndrome 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3512844|PMID:15539463) MGI
Ensembl
PMID:15539463 GO_REF:0000107 MGI:3512844 NCBI chr 2:59,650,439...59,705,728
Ensembl chr 2:59,677,216...59,705,730
JBrowse link
G CCDC146 coiled-coil domain containing 146 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:17,286,319...17,405,120
Ensembl chr18:17,304,941...17,404,914
JBrowse link
G CEP131 centrosomal protein 131 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5647985|PMID:24415959) MGI
Ensembl
PMID:24415959 GO_REF:0000107 MGI:5647985 NCBI chr 9:866,384...883,141
Ensembl chr 9:866,378...883,103
JBrowse link
G CFAP157 cilia and flagella associated protein 157 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 9:55,678,266...55,684,757
Ensembl chr 9:55,678,264...55,727,680
JBrowse link
G CFAP206 cilia and flagella associated protein 206 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:46,898,734...46,961,603
Ensembl chr12:46,898,937...46,961,562
JBrowse link
G CFAP43 cilia and flagella associated protein 43 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:6402702|PMID:31884020)
(MGI:6164072|PMID:29522859)
MGI
TreeGrafter
Ensembl
PMID:29522859 PMID:31884020 GO_REF:0000107 GO_REF:0000118 MGI:6164072 MGI:6402702 NCBI chr28:16,443,417...16,555,027
Ensembl chr28:16,443,389...16,555,792
JBrowse link
G CFAP44 cilia and flagella associated protein 44 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:6164072|PMID:29522859) MGI
Ensembl
PMID:29522859 GO_REF:0000107 MGI:6164072 NCBI chr33:17,633,209...17,759,587
Ensembl chr33:17,633,214...17,759,720
JBrowse link
G CFAP47 cilia and flagella associated protein 47 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:30,880,335...31,390,675 JBrowse link
G CFAP58 cilia and flagella associated protein 58 acts_upstream_of_or_within
involved_in
ISO (MGI:6472114|PMID:32791035)
(PMID:32791035)
MGI
GO_Central
PMID:32791035 MGI:6472114 NCBI chr28:16,653,212...16,752,229
Ensembl chr28:16,653,208...16,751,838
JBrowse link
G CFAP65 cilia and flagella associated protein 65 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr37:25,569,302...25,601,943
Ensembl chr37:25,569,303...25,623,885
JBrowse link
G CFAP69 cilia and flagella associated protein 69 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:6431182|PMID:30415212)
(PMID:30415212)
MGI
Ensembl
PMID:30415212 GO_REF:0000107 MGI:6431182 NCBI chr14:16,154,334...16,209,776
Ensembl chr14:16,154,562...16,209,858
JBrowse link
G CFAP97D1 CFAP97 domain containing 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 9:19,500,889...19,517,607
Ensembl chr 9:19,513,502...19,517,129
JBrowse link
G DNAH1 dynein axonemal heavy chain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:37,364,836...37,441,486
Ensembl chr20:37,364,842...37,465,807
JBrowse link
G DRC7 dynein regulatory complex subunit 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:58,758,644...58,775,484
Ensembl chr 2:58,758,655...58,774,080
JBrowse link
G FSIP2 fibrous sheath interacting protein 2 acts_upstream_of_or_within_positive_effect
involved_in
ISO
IEA
(PMID:30137358), (PMID:30745215) UniProt
Ensembl
PMID:30137358 PMID:30745215 GO_REF:0000107 NCBI chr36:28,196,668...28,271,660
Ensembl chr36:28,196,493...28,271,662
JBrowse link
G IFT88 intraflagellar transport 88 acts_upstream_of_or_within ISO (MGI:4939808|PMID:21337470) MGI PMID:21337470 MGI:4939808 NCBI chr25:17,414,965...17,551,405
Ensembl chr25:17,414,965...17,551,266
JBrowse link
G IQCG IQ motif containing G involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr33:28,745,089...28,791,744
Ensembl chr33:28,745,316...28,800,119
JBrowse link
G MEIG1 meiosis/spermiogenesis associated 1 involved_in
acts_upstream_of
acts_upstream_of_or_within
IEA
ISO
(MGI:5475083|PMID:23258628) Ensembl
MGI
PMID:23258628 GO_REF:0000107 MGI:5475083 NCBI chr 2:21,675,003...21,684,020
Ensembl chr 2:21,675,012...21,679,456
JBrowse link
G MNS1 meiosis specific nuclear structural 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:21,648,709...21,682,650
Ensembl chr30:21,649,008...21,682,576
JBrowse link
G NEURL1 neuralized E3 ubiquitin protein ligase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2151733|PMID:11585928) MGI
Ensembl
PMID:11585928 GO_REF:0000107 MGI:2151733 NCBI chr28:15,856,494...15,935,897
Ensembl chr28:15,856,616...15,933,763
JBrowse link
G PDCL2 phosducin like 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:7510055|PMID:36278277) MGI
Ensembl
PMID:36278277 GO_REF:0000107 MGI:7510055 NCBI chr13:47,832,161...47,861,716
Ensembl chr13:47,832,166...47,861,614
JBrowse link
G PLA2G3 phospholipase A2 group III acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4459354|PMID:20424323) MGI
Ensembl
PMID:20424323 GO_REF:0000107 MGI:4459354 NCBI chr26:24,127,074...24,132,508
Ensembl chr26:24,128,005...24,132,508
JBrowse link
G SPAG16 sperm associated antigen 16 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3052627|PMID:15328412) MGI
Ensembl
PMID:15328412 GO_REF:0000107 MGI:3052627 NCBI chr37:20,782,855...21,690,523
Ensembl chr37:20,782,867...21,690,333
JBrowse link
G SPAG6 sperm associated antigen 6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 2:10,737,260...10,804,080
Ensembl chr 2:10,738,062...10,803,967
JBrowse link
G SPEF2 sperm flagellar 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5292446|PMID:21715716) MGI
TreeGrafter
Ensembl
PMID:21715716 GO_REF:0000107 GO_REF:0000118 MGI:5292446 NCBI chr 4:72,699,672...72,864,260
Ensembl chr 4:72,699,938...72,864,266
JBrowse link
G TBC1D21 TBC1 domain family member 21 involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:37,134,259...37,147,307
Ensembl chr30:37,134,371...37,147,307
JBrowse link
G TPGS1 tubulin polyglutamylase complex subunit 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2387741|PMID:12242242) MGI
Ensembl
PMID:12242242 GO_REF:0000107 MGI:2387741 NCBI chr20:57,971,465...57,977,525
Ensembl chr20:57,971,704...57,977,486
JBrowse link
G TTC12 tetratricopeptide repeat domain 12 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 5:19,829,873...19,874,934
Ensembl chr 5:19,829,874...19,873,145
JBrowse link
G TTLL1 TTL family tubulin polyglutamylase complex subunit L1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5430875|PMID:20442420)
(MGI:4457964|PMID:20498047)
MGI
Ensembl
PMID:20442420 PMID:20498047 GO_REF:0000107 MGI:4457964 MGI:5430875 NCBI chr10:22,456,150...22,492,375
Ensembl chr10:22,456,146...22,488,505
JBrowse link
G TTLL5 tubulin tyrosine ligase like 5 acts_upstream_of_or_within ISO (MGI:5498425|PMID:23558686) MGI PMID:23558686 MGI:5498425 NCBI chr 8:48,651,766...48,920,733
Ensembl chr 8:48,651,814...48,920,039
JBrowse link
G UBE2B ubiquitin conjugating enzyme E2 B acts_upstream_of_or_within ISO (MGI:2668287|PMID:12672659) MGI PMID:12672659 MGI:2668287 NCBI chr11:22,523,671...22,541,473
Ensembl chr11:22,525,051...22,540,388
JBrowse link
G ZMYND12 zinc finger MYND-type containing 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:817,339...842,089
Ensembl chr15:817,384...842,087
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17874
    cellular process 16909
      cellular component organization or biogenesis 6916
        cellular component biogenesis 3428
          cellular component assembly 3122
            axoneme assembly 100
              axonemal basal plate assembly 0
              axonemal central apparatus assembly 6
              axonemal dynein complex assembly + 36
              axonemal outer doublet assembly 0
              radial spoke assembly 2
              sperm axoneme assembly 34
Path 2
Term Annotations click to browse term
  biological_process 17874
    cellular process 16909
      cellular component organization or biogenesis 6916
        cellular component biogenesis 3428
          cellular component assembly 3122
            cell projection assembly 666
              plasma membrane bounded cell projection assembly 651
                cilium assembly 432
                  axoneme assembly 100
                    axonemal basal plate assembly 0
                    axonemal central apparatus assembly 6
                    axonemal dynein complex assembly + 36
                    axonemal outer doublet assembly 0
                    radial spoke assembly 2
                    sperm axoneme assembly 34
paths to the root