Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:axoneme assembly
go back to main search page
Accession:GO:0035082 term browser browse the term
Definition:The assembly and organization of an axoneme, the bundle of microtubules and associated proteins that forms the core of cilia (also called flagella) in eukaryotic cells and is responsible for their movements.
Comment:Note that cilia and eukaryotic flagella are deemed to be equivalent.
Synonyms:exact_synonym: ciliary axoneme assembly;   cilium axoneme assembly;   flagellar axoneme assembly;   flagellum axoneme assembly
 related_synonym: axoneme biogenesis;   cilium axoneme biogenesis
 alt_id: GO:0035083;   GO:0035084


show annotations for term's descendants           Sort by:
axoneme assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak7 adenylate kinase 7 acts_upstream_of_or_within ISO MGI:5431002 (PMID:18776131) RGD PMID:18776131 NCBI chr 6:124,611,789...124,679,978
Ensembl chr 6:124,611,902...124,679,961 		JBrowse link
G Cc2d2a coiled-coil and C2 domain containing 2A acts_upstream_of_or_within ISO MGI:5708063 (PMID:24947469) RGD PMID:24947469 NCBI chr14:67,349,004...67,435,883
Ensembl chr14:67,351,353...67,435,949 		JBrowse link
G Ccdc40 coiled-coil domain 40 molecular ruler complex subunit involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:3662904 (PMID:26387594)		 GO_Central
RGD		 PMID:26387594 GO_REF:0000033 NCBI chr10:104,486,748...104,527,284
Ensembl chr10:104,486,748...104,527,243 		JBrowse link
G Cfap206 cilia and flagella associated protein 206 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 5:49,254,399...49,299,145
Ensembl chr 5:49,254,408...49,299,090 		JBrowse link
G Cfap46 cilia and flagella associated protein 46 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:194,403,212...194,482,790
Ensembl chr 1:194,403,211...194,482,730 		JBrowse link
G Cluap1 clusterin associated protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:5523142 (PMID:23742838)		 Ensembl
RGD		 PMID:23742838 GO_REF:0000107 NCBI chr10:11,587,963...11,619,711
Ensembl chr10:11,588,017...11,619,711 		JBrowse link
G Cplane2 ciliogenesis and planar polarity effector complex subunit 2 acts_upstream_of_or_within ISO MGI:6887372 (PMID:29038301) RGD PMID:29038301 NCBI chr 5:153,515,507...153,516,455
Ensembl chr 5:153,515,376...153,522,508 		JBrowse link
G Dclk1 doublecortin-like kinase 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:139,417,234...139,710,956
Ensembl chr 2:139,417,163...139,710,956 		JBrowse link
G Dcx doublecortin involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr  X:107,430,767...107,573,612
Ensembl chr  X:107,430,767...107,507,476 		JBrowse link
G Dnaaf1 dynein, axonemal, assembly factor 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:47,624,534...47,652,314
Ensembl chr19:47,624,181...47,652,313 		JBrowse link
G Drc1 dynein regulatory complex subunit 1 acts_upstream_of_or_within ISO (PMID:34169321) RGD PMID:34169321 NCBI chr 6:26,025,004...26,059,438
Ensembl chr 6:26,025,005...26,059,414 		JBrowse link
G Foxj1 forkhead box J1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:31630787)		 UniProt
Ensembl
RGD		 PMID:31630787 GO_REF:0000024 GO_REF:0000107 NCBI chr10:101,566,299...101,570,370
Ensembl chr10:101,566,304...101,570,237 		JBrowse link
G Gas8 growth arrest specific 8 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:3870680 (PMID:27472056)
(PMID:27120127)		 UniProt
RGD		 PMID:27120127 PMID:27472056 GO_REF:0000024 NCBI chr19:51,552,770...51,572,323
Ensembl chr19:51,552,816...51,572,305 		JBrowse link
G Hoatz HOATZ cilia and flagella associated protein involved_in ISO (MGI:6414995|PMID:32248064) RGD PMID:32248064 MGI:6414995 NCBI chr 8:51,385,931...51,409,796
Ensembl chr 8:51,388,382...51,412,514 		JBrowse link
G Ift56 intraflagellar transport 56 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5887147|PMID:28264835)		 UniProt
RGD		 PMID:28264835 GO_REF:0000024 MGI:5887147 NCBI chr 4:67,090,622...67,154,707
Ensembl chr 4:67,090,660...67,147,903 		JBrowse link
G Jhy junctional cadherin complex regulator involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:5437647 (PMID:23906841)		 GO_Central
RGD		 PMID:23906841 GO_REF:0000033 NCBI chr 8:41,276,501...41,333,383
Ensembl chr 8:41,276,491...41,333,514 		JBrowse link
G Lrguk leucine-rich repeats and guanylate kinase domain containing involved_in ISO (MGI:5645720|PMID:25781171) RGD PMID:25781171 MGI:5645720 NCBI chr 4:62,647,222...62,770,268
Ensembl chr 4:62,647,264...62,770,319 		JBrowse link
G Lrrc43 leucine rich repeat containing 43 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:33,074,149...33,092,257
Ensembl chr12:33,074,150...33,095,082 		JBrowse link
G Ofd1 Ofd1 centriole and centriolar satellite protein acts_upstream_of_or_within ISO MGI:3620081 (PMID:16311594) RGD PMID:16311594 NCBI chr  X:28,015,347...28,056,115
Ensembl chr  X:28,015,347...28,056,110 		JBrowse link
G Pierce1 piercer of microtubule wall 1 involved_in ISO (MGI:6833916|PMID:34715025) RGD PMID:34715025 MGI:6833916 NCBI chr 3:11,797,031...11,801,568
Ensembl chr 3:11,797,031...11,801,568 		JBrowse link
G Pierce2 piercer of microtubule wall 2 involved_in ISO (MGI:6833916|PMID:34715025) RGD PMID:34715025 MGI:6833916 NCBI chr 8:73,715,383...73,719,849
Ensembl chr 8:73,715,383...73,719,849 		JBrowse link
G Rp1 RP1, axonemal microtubule associated involved_in ISO
IBA		 (MGI:3629826|PMID:15269252)
GO_REF:0000033		 RGD
GO_Central		 PMID:15269252 GO_REF:0000033 MGI:3629826 NCBI chr 5:15,121,104...15,582,363
Ensembl chr 5:15,121,133...15,579,363 		JBrowse link
G Rp1l1 RP1 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:38,259,907...38,271,269
Ensembl chr15:38,259,928...38,270,316 		JBrowse link
G Rsph1 radial spoke head component 1 involved_in ISO
IBA		 (PMID:23993197)
GO_REF:0000033		 RGD
GO_Central		 PMID:23993197 GO_REF:0000033 NCBI chr20:9,341,910...9,360,640
Ensembl chr20:9,341,913...9,360,640 		JBrowse link
G Rsph4a radial spoke head component 4A involved_in ISO
IBA		 (PMID:19200523)
GO_REF:0000033		 RGD
GO_Central		 PMID:19200523 GO_REF:0000033 NCBI chr20:30,764,409...30,780,574
Ensembl chr20:30,764,409...30,780,574 		JBrowse link
G Rsph6a radial spoke head 6 homolog A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:78,700,801...78,720,444
Ensembl chr 1:78,700,814...78,720,431 		JBrowse link
G Rsph9 radial spoke head component 9 involved_in ISO
IBA		 (PMID:19200523)
GO_REF:0000033
UniProtKB:Q5TYW6 (MGI:4418602|PMID:19200523)		 RGD
GO_Central		 PMID:19200523 GO_REF:0000033 MGI:4418602 NCBI chr 9:14,840,115...14,852,950
Ensembl chr 9:14,840,115...14,860,062 		JBrowse link
G Spaca9 sperm acrosome associated 9 involved_in ISO
IEA		 (PMID:36191189)
GO_REF:0000107		 RGD
Ensembl		 PMID:36191189 GO_REF:0000107 NCBI chr 3:12,019,376...12,028,801
Ensembl chr 3:12,019,363...12,029,119 		JBrowse link
G Spag16 sperm associated antigen 16 involved_in ISO (PMID:17699735) RGD PMID:17699735 NCBI chr 9:71,333,005...72,252,772
Ensembl chr 9:71,332,992...72,252,708 		JBrowse link
G Stk36 serine/threonine kinase 36 involved_in ISO (PMID:28543983) RGD PMID:28543983 NCBI chr 9:76,176,922...76,204,423
Ensembl chr 9:76,176,920...76,204,422 		JBrowse link
G Ttll1 TTL family tubulin polyglutamylase complex subunit L1 acts_upstream_of_or_within ISO MGI:4461777 (PMID:20498047) RGD PMID:20498047 NCBI chr 7:114,619,509...114,648,850
Ensembl chr 7:114,619,508...114,648,761 		JBrowse link
G Ulk4 unc-51 like kinase 4 acts_upstream_of_or_within ISO MGI:4362969 (PMID:27445138) RGD PMID:27445138 NCBI chr 8:120,670,879...120,966,026
Ensembl chr 8:120,670,866...120,966,924 		JBrowse link
axonemal central apparatus assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cfap91 cilia and flagella associated protein 91 involved_in ISO (PMID:32161152) RGD PMID:32161152 NCBI chr11:62,413,613...62,457,281
Ensembl chr11:62,413,602...62,457,293 		JBrowse link
G Dnajb13 DnaJ heat shock protein family (Hsp40) member B13 involved_in ISO (PMID:27486783) RGD PMID:27486783 NCBI chr 1:154,848,586...154,863,042
Ensembl chr 1:154,848,594...154,862,963 		JBrowse link
G Hydin Hydin, axonemal central pair apparatus protein involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:1856913 (PMID:18250199)		 GO_Central
RGD		 PMID:18250199 GO_REF:0000033 NCBI chr19:38,236,996...38,583,271
Ensembl chr19:38,236,464...38,583,264 		JBrowse link
G Rsph9 radial spoke head component 9 involved_in ISO (MGI:6451324|PMID:30383886) RGD PMID:30383886 MGI:6451324 NCBI chr 9:14,840,115...14,852,950
Ensembl chr 9:14,840,115...14,860,062 		JBrowse link
G Spag17 sperm associated antigen 17 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:4364991 (PMID:23418344)		 GO_Central
RGD		 PMID:23418344 GO_REF:0000033 NCBI chr 2:187,264,004...187,511,061
Ensembl chr 2:187,264,009...187,510,501 		JBrowse link
G Spef1 sperm flagellar 1 involved_in ISO (MGI:6331463|PMID:30535028) RGD PMID:30535028 MGI:6331463 NCBI chr 3:118,390,659...118,396,842
Ensembl chr 3:118,390,575...118,394,531 		JBrowse link
axonemal dynein complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc103 coiled-coil domain containing 103 involved_in ISO (PMID:22581229) RGD PMID:22581229 NCBI chr10:87,846,327...87,849,959
Ensembl chr10:87,846,357...87,849,757 		JBrowse link
G Ccdc39 coiled-coil domain 39 molecular ruler complex subunit involved_in ISS
ISO		 GO_REF:0000024
(PMID:21131972)		 UniProt
RGD		 PMID:21131972 GO_REF:0000024 NCBI chr 2:116,665,651...116,703,354
Ensembl chr 2:116,665,261...116,703,350 		JBrowse link
G Ccdc40 coiled-coil domain 40 molecular ruler complex subunit involved_in ISO (PMID:21131974) RGD PMID:21131974 NCBI chr10:104,486,748...104,527,284
Ensembl chr10:104,486,748...104,527,243 		JBrowse link
G Ccdc65 coiled-coil domain containing 65 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:129,857,118...129,870,803
Ensembl chr 7:129,857,247...129,870,803 		JBrowse link
G Cfap57 cilia and flagella associated protein 57 acts_upstream_of_or_within ISO MGI:7529021 (PMID:36752199) RGD PMID:36752199 NCBI chr 5:132,074,404...132,148,102
Ensembl chr 5:132,074,395...132,148,462 		JBrowse link
G Dnaaf1 dynein, axonemal, assembly factor 1 involved_in ISO (PMID:19944400), (PMID:19944405) RGD PMID:19944400 PMID:19944405 NCBI chr19:47,624,534...47,652,314
Ensembl chr19:47,624,181...47,652,313 		JBrowse link
G Dnaaf11 dynein axonemal assembly factor 11 involved_in ISO (PMID:23527195) RGD PMID:23527195 NCBI chr 7:98,141,525...98,245,906
Ensembl chr 7:98,144,763...98,245,837 		JBrowse link
G Dnaaf2 dynein, axonemal, assembly factor 2 involved_in ISO
IBA
ISS		 (PMID:19052621)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:19052621 GO_REF:0000024 GO_REF:0000033 NCBI chr 6:87,661,101...87,670,267
Ensembl chr 6:87,660,821...87,670,199 		JBrowse link
G Dnaaf3 dynein, axonemal, assembly factor 3 involved_in ISO
IBA
IEA
ISS		 (PMID:22387996)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024		 RGD
GO_Central
Ensembl
UniProt		 PMID:22387996 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:69,291,300...69,299,365
Ensembl chr 1:69,291,454...69,299,344 		JBrowse link
G Dnaaf6 dynein axonemal assembly factor 6 involved_in ISO
IBA		 (PMID:28041644)
GO_REF:0000033		 RGD
GO_Central		 PMID:28041644 GO_REF:0000033 NCBI chr  X:103,724,419...103,775,633
Ensembl chr  X:103,731,857...103,775,629 		JBrowse link
G Dnai4 dynein axonemal intermediate chain 4 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:6436377|PMID:30060180)		 UniProt
Ensembl
RGD		 PMID:30060180 GO_REF:0000024 GO_REF:0000107 MGI:6436377 NCBI chr 5:117,787,398...117,876,216
Ensembl chr 5:117,788,464...117,876,127 		JBrowse link
G Drc1 dynein regulatory complex subunit 1 involved_in ISO
IBA
IEA
ISS		 (PMID:23354437)
GO_REF:0000033
GO_REF:0000002
GO_REF:0000024		 RGD
GO_Central
InterPro
UniProt		 PMID:23354437 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 NCBI chr 6:26,025,004...26,059,438
Ensembl chr 6:26,025,005...26,059,414 		JBrowse link
G Spag1 sperm associated antigen 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 7:67,361,474...67,421,369
Ensembl chr 7:67,361,477...67,421,368 		JBrowse link
G Ttc12 tetratricopeptide repeat domain 12 involved_in ISO
IBA		 (PMID:31978331)
GO_REF:0000033		 RGD
GO_Central		 PMID:31978331 GO_REF:0000033 NCBI chr 8:49,799,916...49,847,940
Ensembl chr 8:49,799,920...49,847,087 		JBrowse link
inner dynein arm assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc103 coiled-coil domain containing 103 involved_in ISO
IBA		 UniProtKB:Q6DGB6 (PMID:22581229)
GO_REF:0000033		 RGD
GO_Central		 PMID:22581229 GO_REF:0000033 NCBI chr10:87,846,327...87,849,959
Ensembl chr10:87,846,357...87,849,757 		JBrowse link
G Ccdc39 coiled-coil domain 39 molecular ruler complex subunit involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000002
MGI:5056368 (PMID:29317443)
GO_REF:0000033
(PMID:23255504)		 InterPro
RGD
GO_Central		 PMID:23255504 PMID:29317443 GO_REF:0000002 GO_REF:0000033 NCBI chr 2:116,665,651...116,703,354
Ensembl chr 2:116,665,261...116,703,350 		JBrowse link
G Ccdc40 coiled-coil domain 40 molecular ruler complex subunit acts_upstream_of_or_within ISO (PMID:23255504) RGD PMID:23255504 NCBI chr10:104,486,748...104,527,284
Ensembl chr10:104,486,748...104,527,243 		JBrowse link
G Dnaaf1 dynein, axonemal, assembly factor 1 involved_in ISO
IEA		 (PMID:19944400)
GO_REF:0000107		 RGD
Ensembl		 PMID:19944400 GO_REF:0000107 NCBI chr19:47,624,534...47,652,314
Ensembl chr19:47,624,181...47,652,313 		JBrowse link
G Dnaaf11 dynein axonemal assembly factor 11 involved_in ISO (PMID:23122589) RGD PMID:23122589 NCBI chr 7:98,141,525...98,245,906
Ensembl chr 7:98,144,763...98,245,837 		JBrowse link
G Dnaaf2 dynein, axonemal, assembly factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:5526981 (PMID:23525783)		 Ensembl
RGD		 PMID:23525783 GO_REF:0000107 NCBI chr 6:87,661,101...87,670,267
Ensembl chr 6:87,660,821...87,670,199 		JBrowse link
G Dnaaf4 dynein axonemal assembly factor 4 involved_in ISO
IBA
ISS		 (PMID:23872636)
GO_REF:0000033
(MGI:5544549|PMID:23872636)
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:23872636 GO_REF:0000024 GO_REF:0000033 MGI:5544549 NCBI chr 8:73,696,394...73,711,315
Ensembl chr 8:73,698,103...73,711,292 		JBrowse link
G Dnaaf5 dynein, axonemal, assembly factor 5 involved_in ISO
IBA		 (PMID:25232951)
GO_REF:0000033		 RGD
GO_Central		 PMID:25232951 GO_REF:0000033 NCBI chr12:15,453,636...15,492,722
Ensembl chr12:15,453,636...15,492,739 		JBrowse link
G Dnaaf6 dynein axonemal assembly factor 6 involved_in ISO (PMID:28176794) RGD PMID:28176794 NCBI chr  X:103,724,419...103,775,633
Ensembl chr  X:103,731,857...103,775,629 		JBrowse link
G Dnah1 dynein, axonemal, heavy chain 1 acts_upstream_of_or_within ISO (PMID:24360805) RGD PMID:24360805 NCBI chr16:6,455,514...6,517,103
Ensembl chr16:6,456,002...6,518,350 		JBrowse link
G Dnah2 dynein, axonemal, heavy chain 2 involved_in ISO (PMID:30811583) RGD PMID:30811583 NCBI chr10:54,142,648...54,268,901
Ensembl chr10:54,142,737...54,267,298 		JBrowse link
G Dnah7 dynein, axonemal, heavy chain 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:11877439)		 Ensembl
RGD		 PMID:11877439 GO_REF:0000107 NCBI chr 9:54,960,235...55,266,529
Ensembl chr 9:54,960,440...55,262,297 		JBrowse link
G Dnai3 dynein axonemal intermediate chain 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:234,947,910...235,006,173
Ensembl chr 2:234,929,677...235,006,173 		JBrowse link
G Tekt2 tektin 2 acts_upstream_of_or_within ISO MGI:3055308 (PMID:15340058) RGD PMID:15340058 NCBI chr 5:138,619,665...138,623,301
Ensembl chr 5:138,619,667...138,623,204 		JBrowse link
G Zmynd10 zinc finger, MYND-type containing 10 involved_in
acts_upstream_of_or_within		 ISO
ISS
IBA		 (PMID:23891469), (PMID:23891471)
GO_REF:0000024
(MGI:6154799|PMID:29601588)
GO_REF:0000033
MGI:6159883 (PMID:29916806)		 RGD
UniProt
GO_Central		 PMID:23891469 PMID:23891471 PMID:29601588 PMID:29916806 GO_REF:0000024 GO_REF:0000033 MGI:6154799 NCBI chr 8:108,220,386...108,224,745
Ensembl chr 8:108,220,386...108,224,744 		JBrowse link
outer dynein arm assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc103 coiled-coil domain containing 103 involved_in ISO UniProtKB:Q6DGB6 (PMID:22581229) RGD PMID:22581229 NCBI chr10:87,846,327...87,849,959
Ensembl chr10:87,846,357...87,849,757 		JBrowse link
G Ccdc63 coiled-coil domain containing 63 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:34,424,388...34,453,080
Ensembl chr12:34,424,344...34,453,085 		JBrowse link
G Daw1 dynein assembly factor with WD repeats 1 involved_in
acts_upstream_of_or_within
acts_upstream_of_positive_effect		 IEA
ISO
ISS		 GO_REF:0000107
MGI:5431501 (PMID:28289722)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:28289722 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:84,435,552...84,472,632
Ensembl chr 9:84,435,552...84,472,635 		JBrowse link
G Dnaaf1 dynein, axonemal, assembly factor 1 involved_in ISO
IEA		 (PMID:19944400)
GO_REF:0000107		 RGD
Ensembl		 PMID:19944400 GO_REF:0000107 NCBI chr19:47,624,534...47,652,314
Ensembl chr19:47,624,181...47,652,313 		JBrowse link
G Dnaaf11 dynein axonemal assembly factor 11 involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:23122589)
MGI:6147714 (PMID:27353389)
GO_REF:0000033		 RGD
GO_Central		 PMID:23122589 PMID:27353389 GO_REF:0000033 NCBI chr 7:98,141,525...98,245,906
Ensembl chr 7:98,144,763...98,245,837 		JBrowse link
G Dnaaf2 dynein, axonemal, assembly factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:5526981 (PMID:23525783)		 Ensembl
RGD		 PMID:23525783 GO_REF:0000107 NCBI chr 6:87,661,101...87,670,267
Ensembl chr 6:87,660,821...87,670,199 		JBrowse link
G Dnaaf4 dynein axonemal assembly factor 4 involved_in ISO
IBA
ISS		 (PMID:23872636)
GO_REF:0000033
(MGI:5544549|PMID:23872636)
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:23872636 GO_REF:0000024 GO_REF:0000033 MGI:5544549 NCBI chr 8:73,696,394...73,711,315
Ensembl chr 8:73,698,103...73,711,292 		JBrowse link
G Dnaaf5 dynein, axonemal, assembly factor 5 involved_in ISO
IBA		 (PMID:23040496), (PMID:25232951)
GO_REF:0000033		 RGD
GO_Central		 PMID:23040496 PMID:25232951 GO_REF:0000033 NCBI chr12:15,453,636...15,492,722
Ensembl chr12:15,453,636...15,492,739 		JBrowse link
G Dnaaf6 dynein axonemal assembly factor 6 involved_in ISO (PMID:28176794) RGD PMID:28176794 NCBI chr  X:103,724,419...103,775,633
Ensembl chr  X:103,731,857...103,775,629 		JBrowse link
G Dnaaf8 dynein axonemal assembly factor 8 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr10:10,600,747...10,614,891
Ensembl chr10:10,600,734...10,614,891 		JBrowse link
G Dnah17 dynein, axonemal, heavy chain 17 involved_in ISO (PMID:31178125) RGD PMID:31178125 NCBI chr10:103,244,144...103,364,953
Ensembl chr10:103,249,363...103,364,901 		JBrowse link
G Dnah5 dynein, axonemal, heavy chain 5 involved_in
acts_upstream_of_or_within		 IEA
IBA
ISO		 GO_REF:0000107
GO_REF:0000033
(PMID:11062149), (PMID:11788826), (PMID:15750039), (PMID:16627867), (PMID:18950741), (PMID:22499950), (PMID:23261302)		 Ensembl
GO_Central
RGD		 PMID:11062149 PMID:11788826 PMID:15750039 PMID:16627867 PMID:18950741 More... GO_REF:0000033 GO_REF:0000107 NCBI chr 2:78,937,788...79,255,551
Ensembl chr 2:78,937,800...79,254,890 		JBrowse link
G Dnah8 dynein, axonemal, heavy chain 8 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:8,692,939...8,946,780
Ensembl chr20:8,692,963...8,946,772 		JBrowse link
G Dnai1 dynein, axonemal, intermediate chain 1 acts_upstream_of_or_within
involved_in		 ISO
IBA		 (PMID:11231901), (PMID:15750039), (PMID:16858015), (PMID:18950741)
GO_REF:0000033		 RGD
GO_Central		 PMID:11231901 PMID:15750039 PMID:16858015 PMID:18950741 GO_REF:0000033 NCBI chr 5:56,730,179...56,800,926
Ensembl chr 5:56,730,179...56,800,925 		JBrowse link
G Dnai2 dynein, axonemal, intermediate chain 2 acts_upstream_of_or_within
involved_in		 ISO
IBA		 (PMID:18950741), (PMID:23261302)
GO_REF:0000033		 RGD
GO_Central		 PMID:18950741 PMID:23261302 GO_REF:0000033 NCBI chr10:99,759,966...99,793,379
Ensembl chr10:99,759,966...99,793,378 		JBrowse link
G Dnal1 dynein, axonemal, light chain 1 involved_in ISO
IBA
IEA		 (PMID:21496787)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:21496787 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:103,747,801...103,779,015
Ensembl chr 6:103,747,753...103,778,878 		JBrowse link
G Lrrc61 leucine rich repeat containing 61 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:77,503,882...77,523,909
Ensembl chr 4:77,503,857...77,524,020 		JBrowse link
G Nisch nischarin involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:6,364,370...6,400,675
Ensembl chr16:6,364,374...6,400,668 		JBrowse link
G Odad1 outer dynein arm docking complex subunit 1 involved_in ISO
IBA
ISS		 (PMID:23261302), (PMID:23261303)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:23261302 PMID:23261303 GO_REF:0000024 GO_REF:0000033 NCBI chr 1:96,392,132...96,420,926
Ensembl chr 1:96,394,824...96,420,925 		JBrowse link
G Odad2 outer dynein arm docking complex subunit 2 acts_upstream_of_or_within ISO (PMID:23849778), (PMID:24203976)
MGI:5311373 (PMID:23849778)		 RGD PMID:23849778 PMID:24203976 NCBI chr17:55,216,877...55,409,872
Ensembl chr17:55,218,991...55,409,399 		JBrowse link
G Odad3 outer dynein arm docking complex subunit 3 involved_in
acts_upstream_of_or_within		 ISO
IBA		 (MGI:5607335|PMID:25192045)
GO_REF:0000033
(PMID:25192045)		 RGD
GO_Central		 PMID:25192045 GO_REF:0000033 MGI:5607335 NCBI chr 8:20,520,898...20,534,499
Ensembl chr 8:20,520,898...20,534,499 		JBrowse link
G Odad4 outer dynein arm docking complex subunit 4 involved_in
acts_upstream_of_or_within		 ISO (PMID:27486780)
MGI:6110171 (PMID:27486780)		 RGD PMID:27486780 NCBI chr10:85,480,089...85,508,603
Ensembl chr10:85,480,094...85,508,603 		JBrowse link
G Zmynd10 zinc finger, MYND-type containing 10 involved_in
acts_upstream_of_or_within		 ISO
IBA
ISS		 (PMID:23891469), (PMID:23891471)
MGI:6159883 (PMID:29916806)
GO_REF:0000033
(MGI:6154799|PMID:29601588)
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:23891469 PMID:23891471 PMID:29601588 PMID:29916806 GO_REF:0000024 GO_REF:0000033 MGI:6154799 NCBI chr 8:108,220,386...108,224,745
Ensembl chr 8:108,220,386...108,224,744 		JBrowse link
radial spoke assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrrc23 leucine rich repeat containing 23 involved_in ISO
IEA		 (PMID:37804054)
GO_REF:0000107		 RGD
Ensembl		 PMID:37804054 GO_REF:0000107 NCBI chr 4:157,581,285...157,592,188
Ensembl chr 4:157,581,291...157,591,860 		JBrowse link
G Rsph4a radial spoke head component 4A involved_in ISO (MGI:6404703|PMID:32203505) RGD PMID:32203505 MGI:6404703 NCBI chr20:30,764,409...30,780,574
Ensembl chr20:30,764,409...30,780,574 		JBrowse link
G Rsph9 radial spoke head component 9 involved_in ISO (MGI:6451324|PMID:30383886) RGD PMID:30383886 MGI:6451324 NCBI chr 9:14,840,115...14,852,950
Ensembl chr 9:14,840,115...14,860,062 		JBrowse link
sperm axoneme assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Armc2 armadillo repeat containing 2 involved_in ISO
IBA		 (PMID:30686508)
GO_REF:0000033
(MGI:6368074|PMID:30686508)		 RGD
GO_Central		 PMID:30686508 GO_REF:0000033 MGI:6368074 NCBI chr20:45,395,859...45,501,808
Ensembl chr20:45,394,127...45,504,819 		JBrowse link
G Bbof1 basal body orientation factor 1 involved_in ISO (MGI:7565919|PMID:37198331) RGD PMID:37198331 MGI:7565919 NCBI chr 6:104,055,246...104,081,036
Ensembl chr 6:104,055,241...104,082,071 		JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 acts_upstream_of_or_within ISO MGI:3521669 (PMID:15539463) RGD PMID:15539463 NCBI chr19:10,909,653...10,944,998
Ensembl chr19:10,909,619...10,944,993 		JBrowse link
G Ccdc146 coiled-coil domain containing 146 involved_in IEA
ISO
ISS		 GO_REF:0000107
(MGI:7576814|PMID:38038747)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:38038747 GO_REF:0000024 GO_REF:0000107 MGI:7576814 NCBI chr 4:13,662,766...13,811,619
Ensembl chr 4:13,662,766...13,811,608 		JBrowse link
G Cep131 centrosomal protein 131 acts_upstream_of_or_within ISO MGI:3870375 (PMID:24415959) RGD PMID:24415959 NCBI chr10:105,346,015...105,370,380
Ensembl chr10:105,346,015...105,370,380 		JBrowse link
G Cfap157 cilia and flagella associated protein 157 involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(MGI:5812811|PMID:27965440)		 UniProt
GO_Central
RGD		 PMID:27965440 GO_REF:0000024 GO_REF:0000033 MGI:5812811 NCBI chr 3:16,066,521...16,073,504
Ensembl chr 3:16,066,521...16,073,495 		JBrowse link
G Cfap206 cilia and flagella associated protein 206 involved_in ISO
IBA
IEA
ISS		 (MGI:6452763|PMID:32376681)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024		 RGD
GO_Central
Ensembl
UniProt		 PMID:32376681 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 MGI:6452763 NCBI chr 5:49,254,399...49,299,145
Ensembl chr 5:49,254,408...49,299,090 		JBrowse link
G Cfap43 cilia and flagella associated protein 43 involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:29449551)
MGI:6140013|MGI:6431400 (PMID:29522859), (PMID:31884020)
GO_REF:0000033
(MGI:6119337|PMID:29449551), (MGI:6140851|PMID:28552195)		 RGD
GO_Central		 PMID:28552195 PMID:29449551 PMID:29522859 PMID:31884020 GO_REF:0000033 MGI:6119337 MGI:6140851 NCBI chr 1:246,625,259...246,712,438
Ensembl chr 1:246,625,262...246,712,443 		JBrowse link
G Cfap44 cilia and flagella associated protein 44 involved_in
acts_upstream_of_or_within		 ISO (PMID:29449551)
MGI:6140014 (PMID:29522859)
(MGI:6119337|PMID:29449551), (MGI:6140851|PMID:28552195)		 RGD PMID:28552195 PMID:29449551 PMID:29522859 MGI:6119337 MGI:6140851 NCBI chr11:56,199,772...56,283,964
Ensembl chr11:56,201,049...56,283,986 		JBrowse link
G Cfap47 cilia and flagella associated protein 47 involved_in ISO (PMID:33472045)
(MGI:6716514|PMID:33472045)		 RGD PMID:33472045 MGI:6716514 NCBI chr  X:43,264,687...43,616,607
Ensembl chr  X:43,263,490...43,616,852 		JBrowse link
G Cfap58 cilia and flagella associated protein 58 involved_in
acts_upstream_of_or_within		 ISO (PMID:32791035)
MGI:6477396 (PMID:32791035)		 RGD PMID:32791035 NCBI chr 1:246,802,691...246,911,363
Ensembl chr 1:246,802,665...246,911,374 		JBrowse link
G Cfap65 cilia and flagella associated protein 65 involved_in ISO
IBA		 (MGI:6393461|PMID:31571197)
GO_REF:0000033		 RGD
GO_Central		 PMID:31571197 GO_REF:0000033 MGI:6393461 NCBI chr 9:76,459,211...76,494,199
Ensembl chr 9:76,459,211...76,494,128 		JBrowse link
G Cfap69 cilia and flagella associated protein 69 acts_upstream_of_or_within ISO (PMID:30415212)
MGI:6431857 (PMID:30415212)		 RGD PMID:30415212 NCBI chr 4:28,379,604...28,452,562
Ensembl chr 4:28,375,996...28,450,698 		JBrowse link
G Cfap97d1 CFAP97 domain containing 1 involved_in ISO
IBA		 (MGI:6452255|PMID:32785227)
GO_REF:0000033		 RGD
GO_Central		 PMID:32785227 GO_REF:0000033 MGI:6452255 NCBI chr10:86,933,585...86,944,566
Ensembl chr10:86,933,808...86,938,244 		JBrowse link
G Dnah1 dynein, axonemal, heavy chain 1 involved_in ISO
ISS		 (PMID:24360805)
GO_REF:0000024		 RGD
UniProt		 PMID:24360805 GO_REF:0000024 NCBI chr16:6,455,514...6,517,103
Ensembl chr16:6,456,002...6,518,350 		JBrowse link
G Drc7 dynein regulatory complex subunit 7 involved_in ISO (MGI:6391458|PMID:31961863) RGD PMID:31961863 MGI:6391458 NCBI chr19:9,943,452...9,961,266
Ensembl chr19:9,943,456...9,961,163 		JBrowse link
G Fsip2 fibrous sheath-interacting protein 2 acts_upstream_of_or_within_positive_effect ISO (PMID:30137358), (PMID:30745215) RGD PMID:30137358 PMID:30745215 NCBI chr 3:67,962,345...68,032,866
Ensembl chr 3:67,962,360...68,032,868 		JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within ISO MGI:2157527 (PMID:21337470) RGD PMID:21337470 NCBI chr15:31,573,325...31,666,068
Ensembl chr15:31,573,376...31,672,147 		JBrowse link
G Iqcg IQ motif containing G involved_in ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000107
(MGI:5608638|PMID:24849454)		 UniProt
GO_Central
Ensembl
RGD		 PMID:24849454 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 MGI:5608638 NCBI chr11:67,730,117...67,771,170
Ensembl chr11:67,730,247...67,771,168 		JBrowse link
G Meig1 meiosis/spermiogenesis associated 1 acts_upstream_of_or_within ISO MGI:3843498|MGI:4367077 (PMID:23258628) RGD PMID:23258628 NCBI chr17:74,810,791...74,828,433
Ensembl chr17:74,814,632...74,828,433 		JBrowse link
G Mns1 meiosis-specific nuclear structural 1 involved_in ISO (MGI:5318625|PMID:22396656) RGD PMID:22396656 MGI:5318625 NCBI chr 8:73,148,877...73,169,570
Ensembl chr 8:73,148,877...73,176,925 		JBrowse link
G Neurl1 neuralized E3 ubiquitin protein ligase 1 acts_upstream_of_or_within ISO MGI:2153143 (PMID:11585928) RGD PMID:11585928 NCBI chr 1:246,066,830...246,152,890
Ensembl chr 1:246,067,100...246,152,903 		JBrowse link
G Pdcl2 phosducin-like 2 acts_upstream_of_or_within ISO MGI:7546801 (PMID:36278277) RGD PMID:36278277 NCBI chr14:31,874,563...31,895,265
Ensembl chr14:31,874,578...31,895,272 		JBrowse link
G Pla2g3 phospholipase A2, group III acts_upstream_of_or_within ISO MGI:4461174 (PMID:20424323) RGD PMID:20424323 NCBI chr14:78,367,625...78,373,913
Ensembl chr14:78,368,105...78,373,913 		JBrowse link
G Spag16 sperm associated antigen 16 acts_upstream_of_or_within ISO MGI:3606977 (PMID:15328412) RGD PMID:15328412 NCBI chr 9:71,333,005...72,252,772
Ensembl chr 9:71,332,992...72,252,708 		JBrowse link
G Spag6 sperm associated antigen 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:81,352,372...81,401,504
Ensembl chr17:81,349,084...81,401,501 		JBrowse link
G Spag6l sperm associated antigen 6-like involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:2662475 (PMID:12391165)		 GO_Central
RGD		 PMID:12391165 GO_REF:0000033 NCBI chr11:84,173,628...84,269,374
Ensembl chr11:84,173,526...84,269,364 		JBrowse link
G Spef2 sperm flagellar 2 involved_in
acts_upstream_of_or_within		 ISS
ISO
IBA
IEA		 GO_REF:0000024
MGI:5295267 (PMID:21715716)
GO_REF:0000033
GO_REF:0000107
(PMID:31048344), (PMID:31151990)		 UniProt
RGD
GO_Central
Ensembl		 PMID:21715716 PMID:31048344 PMID:31151990 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:58,512,489...58,694,718
Ensembl chr 2:58,512,489...58,694,664 		JBrowse link
G Tbc1d21 TBC1 domain family, member 21 involved_in ISO (MGI:6490732|PMID:32976492) RGD PMID:32976492 MGI:6490732 NCBI chr 8:58,761,562...58,773,711
Ensembl chr 8:58,761,563...58,773,711 		JBrowse link
G Tpgs1 tubulin polyglutamylase complex subunit 1 acts_upstream_of_or_within ISO MGI:2388468 (PMID:12242242) RGD PMID:12242242 NCBI chr 7:10,029,842...10,035,764
Ensembl chr 7:10,029,854...10,035,764 		JBrowse link
G Ttc12 tetratricopeptide repeat domain 12 involved_in ISO
IBA		 (PMID:31978331)
GO_REF:0000033		 RGD
GO_Central		 PMID:31978331 GO_REF:0000033 NCBI chr 8:49,799,916...49,847,940
Ensembl chr 8:49,799,920...49,847,087 		JBrowse link
G Ttll1 TTL family tubulin polyglutamylase complex subunit L1 acts_upstream_of_or_within ISO MGI:4297933|MGI:4461777 (PMID:20442420), (PMID:20498047) RGD PMID:20442420 PMID:20498047 NCBI chr 7:114,619,509...114,648,850
Ensembl chr 7:114,619,508...114,648,761 		JBrowse link
G Ttll5 tubulin tyrosine ligase like 5 acts_upstream_of_or_within ISO (PMID:23558686) RGD PMID:23558686 NCBI chr 6:105,483,091...105,700,920
Ensembl chr 6:105,483,191...105,700,934 		JBrowse link
G Ube2b ubiquitin-conjugating enzyme E2B acts_upstream_of_or_within ISO MGI:2183933 (PMID:12672659) RGD PMID:12672659 NCBI chr10:36,248,434...36,263,379
Ensembl chr10:36,248,438...36,264,665 		JBrowse link
G Zmynd12 zinc finger, MYND-type containing 12 involved_in ISO (PMID:37934199) RGD PMID:37934199 NCBI chr 5:133,026,917...133,059,985
Ensembl chr 5:133,027,009...133,059,995 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20115
    cellular process 18524
      cellular component organization or biogenesis 7070
        cellular component biogenesis 3505
          cellular component assembly 3184
            axoneme assembly 102
              axonemal basal plate assembly 0
              axonemal central apparatus assembly 6
              axonemal dynein complex assembly + 37
              axonemal outer doublet assembly 0
              radial spoke assembly 3
              sperm axoneme assembly 35
Path 2
Term Annotations click to browse term
  biological_process 20115
    cellular process 18524
      cellular component organization or biogenesis 7070
        cellular component biogenesis 3505
          cellular component assembly 3184
            cell projection assembly 663
              plasma membrane bounded cell projection assembly 649
                cilium assembly 433
                  axoneme assembly 102
                    axonemal basal plate assembly 0
                    axonemal central apparatus assembly 6
                    axonemal dynein complex assembly + 37
                    axonemal outer doublet assembly 0
                    radial spoke assembly 3
                    sperm axoneme assembly 35
paths to the root