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ONTOLOGY REPORT - ANNOTATIONS


Term:axoneme assembly
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Accession:GO:0035082 term browser browse the term
Definition:The assembly and organization of an axoneme, the bundle of microtubules and associated proteins that forms the core of cilia (also called flagella) in eukaryotic cells and is responsible for their movements.
Comment:Note that cilia and eukaryotic flagella are deemed to be equivalent.
Synonyms:exact_synonym: ciliary axoneme assembly;   cilium axoneme assembly;   flagellar axoneme assembly;   flagellum axoneme assembly
 related_synonym: axoneme biogenesis;   cilium axoneme biogenesis
 alt_id: GO:0035083;   GO:0035084


show annotations for term's descendants           Sort by:
 
axoneme assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07005983.1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 1:211,943,877...211,956,858 JBrowse link
G AABR07005985.1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 1:211,983,729...212,022,212 JBrowse link
G AABR07030901.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr10:108,387,789...108,393,442 JBrowse link
G Ak7 adenylate kinase 7 acts_upstream_of_or_within ISO MGI:5431002 (MGI:5430887|PMID:18776131) RGD PMID:18776131 MGI:5430887 NCBI chr 6:129,538,648...129,606,960
Ensembl chr 6:129,538,982...129,606,932
JBrowse link
G Cc2d2a coiled-coil and C2 domain containing 2A acts_upstream_of_or_within ISO MGI:5708063 (MGI:5696765|PMID:24947469) RGD PMID:24947469 MGI:5696765 NCBI chr14:71,895,128...71,979,452
Ensembl chr14:71,895,246...71,973,419
JBrowse link
G Ccdc40 coiled-coil domain containing 40 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:3662904 (MGI:5763712|PMID:26387594)
RGD PMID:26387594, PMID:21873635 MGI:5763712, RGD:13792537 NCBI chr10:108,055,270...108,393,408
Ensembl chr10:108,340,240...108,372,862
JBrowse link
G Cfap206 cilia and flagella associated protein 206 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 5:50,148,685...50,193,580
Ensembl chr 5:50,148,658...50,193,571
JBrowse link
G Cluap1 clusterin associated protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:5523142 (MGI:5509110|PMID:23742838)
Ensembl
RGD
PMID:23742838 GO_REF:0000107 MGI:5509110 NCBI chr10:11,847,058...11,878,792
Ensembl chr10:11,847,102...11,878,792
JBrowse link
G Dcx doublecortin involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:115,098,675...115,175,515
Ensembl chr  X:115,098,675...115,175,299
JBrowse link
G Foxj1 forkhead box J1 involved_in ISS
ISO
GO_REF:0000024
(PMID:31630787)
UniProt
RGD
PMID:31630787 GO_REF:0000024 NCBI chr10:105,282,090...105,289,396 JBrowse link
G Gas8 growth arrest specific 8 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:3870680 (MGI:5789455|PMID:27472056)
(PMID:27120127)
UniProt
RGD
PMID:27120127 PMID:27472056 GO_REF:0000024 MGI:5789455 NCBI chr19:56,316,367...56,335,873
Ensembl chr19:56,316,268...56,335,870
JBrowse link
G Hoatz HOATZ cilia and flagella associated protein involved_in ISO (MGI:6414995|PMID:32248064) RGD PMID:32248064 MGI:6414995 NCBI chr 8:55,471,705...55,490,973
Ensembl chr 8:55,471,701...55,491,152
JBrowse link
G Jhy junctional cadherin complex regulator involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:5437647 (MGI:5517715|PMID:23906841)
RGD PMID:23906841, PMID:21873635 MGI:5517715, RGD:13792537 NCBI chr 8:45,084,067...45,140,570
Ensembl chr 8:45,084,320...45,137,893
JBrowse link
G LOC102550841 uncharacterized LOC102550841 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:76,913,521...77,007,087
Ensembl chr 9:76,913,639...77,006,527
JBrowse link
G Lrguk leucine-rich repeats and guanylate kinase domain containing involved_in ISO (MGI:5645720|PMID:25781171) RGD PMID:25781171 MGI:5645720 NCBI chr 4:61,419,987...61,544,748
Ensembl chr 4:61,420,009...61,544,446
JBrowse link
G Ofd1 OFD1, centriole and centriolar satellite protein acts_upstream_of_or_within ISO MGI:3620081 (MGI:3617259|PMID:16311594) RGD PMID:16311594 MGI:3617259 NCBI chr  X:29,562,165...29,602,934
Ensembl chr  X:29,562,165...29,602,925
JBrowse link
G Rp1 RP1, axonemal microtubule associated involved_in IBA
ISO
PMID:21873635
(MGI:3629826|PMID:15269252)
RGD PMID:15269252, PMID:21873635 MGI:3629826, RGD:13792537 NCBI chr 5:15,005,028...15,060,508
Ensembl chr 5:15,043,955...15,060,508
JBrowse link
G Rp1l1 RP1 like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:47,344,380...47,384,461
Ensembl chr15:47,373,120...47,383,508
JBrowse link
G Rsph1 radial spoke head component 1 involved_in IBA
ISO
PMID:21873635
(PMID:23993197)
RGD PMID:23993197, PMID:21873635 RGD:13792537 NCBI chr20:9,998,698...10,020,719
Ensembl chr20:9,998,701...10,013,559
JBrowse link
G Rsph4a radial spoke head component 4A involved_in ISO
IBA
(PMID:19200523)
PMID:21873635
RGD PMID:19200523, PMID:21873635 RGD:13792537 NCBI chr20:32,450,701...32,467,362
Ensembl chr20:32,450,733...32,467,194
Ensembl chr20:32,450,733...32,467,194
JBrowse link
G Rsph6a radial spoke head 6 homolog A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:79,959,555...79,979,217
Ensembl chr 1:79,959,591...79,979,205
JBrowse link
G Rsph9 radial spoke head component 9 involved_in IBA
ISO
PMID:21873635
UniProtKB:Q5TYW6 (MGI:4418602|PMID:19200523)
(PMID:19200523)
RGD PMID:19200523, PMID:21873635 MGI:4418602, RGD:13792537 NCBI chr 9:17,224,589...17,245,093
Ensembl chr 9:17,225,122...17,245,093
JBrowse link
G Spag16 sperm associated antigen 16 involved_in ISO
IBA
(PMID:17699735)
PMID:21873635
RGD PMID:17699735, PMID:21873635 RGD:13792537 NCBI chr 9:77,027,626...77,833,476
Ensembl chr 9:77,320,726...77,833,281
JBrowse link
G Ttc26 tetratricopeptide repeat domain 26 involved_in ISS
ISO
GO_REF:0000024
(MGI:5887147|PMID:28264835)
UniProt
RGD
PMID:28264835 GO_REF:0000024 MGI:5887147 NCBI chr 4:66,090,178...66,147,998
Ensembl chr 4:66,090,209...66,148,001
JBrowse link
G Ttll1 tubulin tyrosine ligase like 1 acts_upstream_of_or_within ISO MGI:4461777 (MGI:4457964|PMID:20498047) RGD PMID:20498047 MGI:4457964 NCBI chr 7:124,338,396...124,367,719
Ensembl chr 7:124,338,395...124,367,630
JBrowse link
G Ulk4 unc-51 like kinase 4 acts_upstream_of_or_within ISO MGI:4362969 (MGI:5790513|PMID:27445138) RGD PMID:27445138 MGI:5790513 NCBI chr 8:129,631,003...129,919,080
Ensembl chr 8:129,632,149...129,919,120
JBrowse link
axonemal central apparatus assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnajb13 DnaJ heat shock protein family (Hsp40) member B13 involved_in ISO (PMID:27486783) RGD PMID:27486783 NCBI chr 1:165,515,718...165,530,163
Ensembl chr 1:165,515,726...165,530,095
JBrowse link
G Hydin Hydin, axonemal central pair apparatus protein acts_upstream_of_or_within ISO MGI:1856913 (MGI:3793384|PMID:18250199) RGD PMID:18250199 MGI:3793384 NCBI chr19:41,036,507...41,379,634
Ensembl chr19:41,036,510...41,379,588
JBrowse link
G Rsph9 radial spoke head component 9 involved_in ISO (MGI:6451324|PMID:30383886) RGD PMID:30383886 MGI:6451324 NCBI chr 9:17,224,589...17,245,093
Ensembl chr 9:17,225,122...17,245,093
JBrowse link
G Spag17 sperm associated antigen 17 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:4364991 (MGI:5576118|PMID:23418344)
RGD PMID:23418344, PMID:21873635 MGI:5576118, RGD:13792537 NCBI chr 2:202,159,659...202,452,361
Ensembl chr 2:202,200,797...202,443,026
JBrowse link
G Spef1 sperm flagellar 1 involved_in ISO (MGI:6331463|PMID:30535028) RGD PMID:30535028 MGI:6331463 NCBI chr 3:123,712,907...123,720,787
Ensembl chr 3:123,714,564...123,718,432
JBrowse link
axonemal dynein complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc103 coiled-coil domain containing 103 involved_in ISO (PMID:22581229) RGD PMID:22581229 NCBI chr10:90,984,213...90,987,829
Ensembl chr10:90,984,227...90,987,823
JBrowse link
G Ccdc39 coiled-coil domain containing 39 involved_in ISS
ISO
GO_REF:0000024
(PMID:21131972)
UniProt
RGD
PMID:21131972 GO_REF:0000024 NCBI chr 2:120,278,605...120,367,829
Ensembl chr 2:120,278,605...120,316,600
JBrowse link
G Ccdc40 coiled-coil domain containing 40 involved_in ISO (PMID:21131974) RGD PMID:21131974 NCBI chr10:108,055,270...108,393,408
Ensembl chr10:108,340,240...108,372,862
JBrowse link
G Ccdc65 coiled-coil domain containing 65 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:140,383,395...140,397,186
Ensembl chr 7:140,383,397...140,397,179
JBrowse link
G Dnaaf1 dynein, axonemal, assembly factor 1 involved_in ISO (PMID:19944400), (PMID:19944405) RGD PMID:19944400 PMID:19944405 NCBI chr19:52,217,427...52,245,930
Ensembl chr19:52,217,984...52,245,929
JBrowse link
G Dnaaf11 dynein axonemal assembly factor 11 involved_in ISO (PMID:23527195) RGD PMID:23527195 NCBI chr 7:107,130,402...107,231,507
Ensembl chr 7:107,130,402...107,223,047
JBrowse link
G Dnaaf2 dynein, axonemal, assembly factor 2 involved_in ISO
ISS
IBA
(PMID:19052621)
GO_REF:0000024
PMID:21873635
RGD
UniProt
PMID:19052621, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 6:91,481,439...91,490,189
Ensembl chr 6:91,481,954...91,490,366
JBrowse link
G Dnaaf3 dynein, axonemal, assembly factor 3 involved_in IEA
ISS
ISO
GO_REF:0000002
GO_REF:0000024
(PMID:22387996)
InterPro
UniProt
RGD
PMID:22387996 GO_REF:0000002 GO_REF:0000024 NCBI chr 1:72,874,131...72,882,867
Ensembl chr 1:72,874,404...72,883,002
JBrowse link
G Dnaaf6 dynein axonemal assembly factor 6 involved_in ISO (PMID:28041644) RGD PMID:28041644 NCBI chr  X:111,389,557...111,439,399
Ensembl chr  X:111,396,995...111,439,376
JBrowse link
G Dnai4 dynein axonemal intermediate chain 4 involved_in ISS
ISO
GO_REF:0000024
(MGI:6436377|PMID:30060180)
UniProt
RGD
PMID:30060180 GO_REF:0000024 MGI:6436377 NCBI chr 5:122,551,370...122,642,161
Ensembl chr 5:122,551,405...122,642,202
JBrowse link
G Drc1 dynein regulatory complex subunit 1 involved_in ISO
ISS
IBA
(PMID:23354437)
GO_REF:0000024
PMID:21873635
RGD
UniProt
PMID:23354437, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 6:27,425,237...27,460,038
Ensembl chr 6:27,425,235...27,460,038
JBrowse link
G Spag1 sperm associated antigen 1 involved_in ISS
IBA
GO_REF:0000024
PMID:21873635
UniProt PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 7:74,994,379...75,054,294
Ensembl chr 7:74,994,605...75,054,293
JBrowse link
G Ttc12 tetratricopeptide repeat domain 12 involved_in ISO (PMID:31978331) RGD PMID:31978331 NCBI chr 8:53,770,685...53,818,873
Ensembl chr 8:53,770,681...53,816,447
JBrowse link
inner dynein arm assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc103 coiled-coil domain containing 103 involved_in ISO
IBA
UniProtKB:Q6DGB6 (PMID:22581229)
PMID:21873635
RGD PMID:22581229, PMID:21873635 RGD:13792537 NCBI chr10:90,984,213...90,987,829
Ensembl chr10:90,984,227...90,987,823
JBrowse link
G Ccdc39 coiled-coil domain containing 39 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
PMID:21873635
MGI:5056368 (MGI:6111002|PMID:29317443)
GO_REF:0000002
(PMID:23255504)
RGD
InterPro
PMID:23255504 PMID:29317443, PMID:21873635 GO_REF:0000002 MGI:6111002, RGD:13792537 NCBI chr 2:120,278,605...120,367,829
Ensembl chr 2:120,278,605...120,316,600
JBrowse link
G Ccdc40 coiled-coil domain containing 40 involved_in ISO (PMID:23255504) RGD PMID:23255504 NCBI chr10:108,055,270...108,393,408
Ensembl chr10:108,340,240...108,372,862
JBrowse link
G Dnaaf1 dynein, axonemal, assembly factor 1 involved_in ISO
IEA
(PMID:19944400)
GO_REF:0000107
RGD
Ensembl
PMID:19944400 GO_REF:0000107 NCBI chr19:52,217,427...52,245,930
Ensembl chr19:52,217,984...52,245,929
JBrowse link
G Dnaaf11 dynein axonemal assembly factor 11 involved_in ISO (PMID:23122589) RGD PMID:23122589 NCBI chr 7:107,130,402...107,231,507
Ensembl chr 7:107,130,402...107,223,047
JBrowse link
G Dnaaf2 dynein, axonemal, assembly factor 2 acts_upstream_of_or_within ISO MGI:5526981 (MGI:5514194|PMID:23525783) RGD PMID:23525783 MGI:5514194 NCBI chr 6:91,481,439...91,490,189
Ensembl chr 6:91,481,954...91,490,366
JBrowse link
G Dnaaf4 dynein axonemal assembly factor 4 involved_in ISO
ISS
IBA
(PMID:23872636)
(MGI:5544549|PMID:23872636)
GO_REF:0000024
PMID:21873635
RGD
UniProt
PMID:23872636, PMID:21873635 GO_REF:0000024 MGI:5544549, RGD:13792537 NCBI chr 8:79,637,678...79,651,892
Ensembl chr 8:79,638,696...79,651,884
JBrowse link
G Dnaaf5 dynein, axonemal, assembly factor 5 involved_in IBA
ISO
PMID:21873635
(PMID:25232951)
RGD PMID:25232951, PMID:21873635 RGD:13792537 NCBI chr12:17,545,468...17,584,466
Ensembl chr12:17,545,468...17,584,466
JBrowse link
G Dnaaf6 dynein axonemal assembly factor 6 involved_in ISO (PMID:28176794) RGD PMID:28176794 NCBI chr  X:111,389,557...111,439,399
Ensembl chr  X:111,396,995...111,439,376
JBrowse link
G Dnah1 dynein, axonemal, heavy chain 1 involved_in ISO (PMID:24360805) RGD PMID:24360805 NCBI chr16:7,345,131...7,407,009
Ensembl chr16:7,345,978...7,408,265
JBrowse link
G Dnah7 dynein, axonemal, heavy chain 7 involved_in ISO
IEA
(PMID:11877439)
GO_REF:0000107
RGD
Ensembl
PMID:11877439 GO_REF:0000107 NCBI chr 9:60,070,087...60,330,121
NCBI chr 9:59,564,253...59,595,347
Ensembl chr 9:60,070,739...60,330,125
Ensembl chr 9:60,070,739...60,330,125
JBrowse link
G Dnai3 dynein axonemal intermediate chain 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:251,912,432...251,970,699
Ensembl chr 2:251,912,368...251,970,768
JBrowse link
G Tekt2 tektin 2 acts_upstream_of_or_within ISO MGI:3055308 (MGI:3054498|PMID:15340058) RGD PMID:15340058 MGI:3054498 NCBI chr 5:144,341,955...144,345,500
Ensembl chr 5:144,341,946...144,345,531
JBrowse link
G Zmynd10 zinc finger, MYND-type containing 10 involved_in
acts_upstream_of_or_within
ISO
IBA
ISS
(PMID:23891469), (PMID:23891471)
(MGI:6154799|PMID:29601588)
MGI:6159883 (MGI:6284218|PMID:29916806)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:23891469 PMID:23891471 PMID:29601588 PMID:29916806, PMID:21873635 GO_REF:0000024 MGI:6154799 MGI:6284218, RGD:13792537 NCBI chr 8:116,302,513...116,306,871
Ensembl chr 8:116,302,513...116,306,870
JBrowse link
outer dynein arm assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc103 coiled-coil domain containing 103 involved_in ISO UniProtKB:Q6DGB6 (PMID:22581229) RGD PMID:22581229 NCBI chr10:90,984,213...90,987,829
Ensembl chr10:90,984,227...90,987,823
JBrowse link
G Ccdc63 coiled-coil domain containing 63 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:39,905,120...39,950,719
Ensembl chr12:39,913,628...39,950,641
JBrowse link
G Daw1 dynein assembly factor with WD repeats 1 acts_upstream_of_or_within ISO MGI:5431501 (MGI:6161988|PMID:28289722) RGD PMID:28289722 MGI:6161988 NCBI chr 9:88,964,530...89,001,568
Ensembl chr 9:88,964,525...89,001,567
JBrowse link
G Dnaaf1 dynein, axonemal, assembly factor 1 involved_in ISO
IEA
(PMID:19944400)
GO_REF:0000107
RGD
Ensembl
PMID:19944400 GO_REF:0000107 NCBI chr19:52,217,427...52,245,930
Ensembl chr19:52,217,984...52,245,929
JBrowse link
G Dnaaf11 dynein axonemal assembly factor 11 involved_in
acts_upstream_of_or_within
ISO (PMID:23122589)
MGI:6147714 (MGI:6147712|PMID:27353389)
RGD PMID:23122589 PMID:27353389 MGI:6147712 NCBI chr 7:107,130,402...107,231,507
Ensembl chr 7:107,130,402...107,223,047
JBrowse link
G Dnaaf2 dynein, axonemal, assembly factor 2 acts_upstream_of_or_within ISO MGI:5526981 (MGI:5514194|PMID:23525783) RGD PMID:23525783 MGI:5514194 NCBI chr 6:91,481,439...91,490,189
Ensembl chr 6:91,481,954...91,490,366
JBrowse link
G Dnaaf4 dynein axonemal assembly factor 4 involved_in ISO
IBA
ISS
(PMID:23872636)
(MGI:5544549|PMID:23872636)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:23872636, PMID:21873635 GO_REF:0000024 MGI:5544549, RGD:13792537 NCBI chr 8:79,637,678...79,651,892
Ensembl chr 8:79,638,696...79,651,884
JBrowse link
G Dnaaf5 dynein, axonemal, assembly factor 5 involved_in IBA
ISO
PMID:21873635
(PMID:23040496), (PMID:25232951)
RGD PMID:23040496 PMID:25232951, PMID:21873635 RGD:13792537 NCBI chr12:17,545,468...17,584,466
Ensembl chr12:17,545,468...17,584,466
JBrowse link
G Dnaaf6 dynein axonemal assembly factor 6 involved_in ISO (PMID:28176794) RGD PMID:28176794 NCBI chr  X:111,389,557...111,439,399
Ensembl chr  X:111,396,995...111,439,376
JBrowse link
G Dnaaf8 dynein axonemal assembly factor 8 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr10:10,794,441...10,808,665
Ensembl chr10:10,794,445...10,808,585
JBrowse link
G Dnah17 dynein, axonemal, heavy chain 17 involved_in ISO (PMID:31178125) RGD PMID:31178125 NCBI chr10:107,028,115...107,161,288
Ensembl chr10:107,029,466...107,158,997
JBrowse link
G Dnah5 dynein, axonemal, heavy chain 5 involved_in ISO (PMID:11062149), (PMID:11788826), (PMID:15750039), (PMID:16627867), (PMID:18950741), (PMID:22499950), (PMID:23261302) RGD PMID:11062149 PMID:11788826 PMID:15750039 PMID:16627867 PMID:18950741 PMID:22499950 PMID:23261302 NCBI chr 2:80,947,730...81,143,997
NCBI chr 2:81,159,060...81,337,560
Ensembl chr 2:80,948,658...81,143,447
JBrowse link
G Dnah8 dynein, axonemal, heavy chain 8 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:9,301,317...9,560,805
Ensembl chr20:9,313,271...9,560,682
JBrowse link
G Dnai1 dynein, axonemal, intermediate chain 1 involved_in IBA
ISO
PMID:21873635
(PMID:11231901), (PMID:15750039), (PMID:16858015), (PMID:18950741)
RGD PMID:11231901 PMID:15750039 PMID:16858015 PMID:18950741, PMID:21873635 RGD:13792537 NCBI chr 5:57,947,796...58,017,985
Ensembl chr 5:57,947,716...58,017,992
JBrowse link
G Dnai2 dynein, axonemal, intermediate chain 2 involved_in IBA
ISO
PMID:21873635
(PMID:18950741), (PMID:23261302)
RGD PMID:18950741 PMID:23261302, PMID:21873635 RGD:13792537 NCBI chr10:103,266,343...103,301,521
Ensembl chr10:103,266,296...103,301,544
JBrowse link
G Dnal1 dynein, axonemal, light chain 1 involved_in IBA
ISO
PMID:21873635
(PMID:21496787)
RGD PMID:21496787, PMID:21873635 RGD:13792537 NCBI chr 6:107,596,785...107,623,869
Ensembl chr 6:107,596,782...107,625,214
JBrowse link
G Odad1 outer dynein arm docking complex subunit 1 involved_in ISO
IBA
ISS
(PMID:23261302), (PMID:23261303)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:23261302 PMID:23261303, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 1:101,904,042...101,932,999
Ensembl chr 1:101,906,903...101,932,998
JBrowse link
G Odad2 outer dynein arm docking complex subunit 2 involved_in
acts_upstream_of_or_within
ISO (PMID:23849778), (PMID:24203976)
MGI:5311373 (MGI:5551687|PMID:23849778)
RGD PMID:23849778 PMID:24203976 MGI:5551687 NCBI chr17:60,283,926...60,474,289
Ensembl chr17:60,287,203...60,474,031
JBrowse link
G Odad3 outer dynein arm docking complex subunit 3 involved_in ISO (PMID:25192045)
(MGI:5607335|PMID:25192045)
RGD PMID:25192045 MGI:5607335 NCBI chr 8:23,000,912...23,014,707
Ensembl chr 8:23,000,872...23,014,499
JBrowse link
G Odad4 outer dynein arm docking complex subunit 4 involved_in
acts_upstream_of_or_within
ISO (PMID:27486780)
MGI:6110171 (MGI:5913140|PMID:27486780)
RGD PMID:27486780 MGI:5913140 NCBI chr10:88,459,490...88,488,237
Ensembl chr10:88,459,490...88,488,237
JBrowse link
G Zmynd10 zinc finger, MYND-type containing 10 involved_in
acts_upstream_of_or_within
ISO
ISS
IBA
(PMID:23891469), (PMID:23891471)
MGI:6159883 (MGI:6284218|PMID:29916806)
(MGI:6154799|PMID:29601588)
GO_REF:0000024
PMID:21873635
RGD
UniProt
PMID:23891469 PMID:23891471 PMID:29601588 PMID:29916806, PMID:21873635 GO_REF:0000024 MGI:6154799 MGI:6284218, RGD:13792537 NCBI chr 8:116,302,513...116,306,871
Ensembl chr 8:116,302,513...116,306,870
JBrowse link
radial spoke assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rsph4a radial spoke head component 4A involved_in ISO (MGI:6404703|PMID:32203505) RGD PMID:32203505 MGI:6404703 NCBI chr20:32,450,701...32,467,362
Ensembl chr20:32,450,733...32,467,194
Ensembl chr20:32,450,733...32,467,194
JBrowse link
G Rsph9 radial spoke head component 9 involved_in ISO (MGI:6451324|PMID:30383886) RGD PMID:30383886 MGI:6451324 NCBI chr 9:17,224,589...17,245,093
Ensembl chr 9:17,225,122...17,245,093
JBrowse link
sperm axoneme assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Armc2 armadillo repeat containing 2 involved_in ISO
IBA
(PMID:30686508)
(MGI:6368074|PMID:30686508)
PMID:21873635
RGD PMID:30686508, PMID:21873635 MGI:6368074, RGD:13792537 NCBI chr20:46,766,467...46,872,009
Ensembl chr20:46,765,881...46,871,946
JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 acts_upstream_of_or_within ISO MGI:3521669 (MGI:3512844|PMID:15539463) RGD PMID:15539463 MGI:3512844 NCBI chr19:11,385,921...11,421,523
Ensembl chr19:11,386,024...11,421,498
JBrowse link
G Cep131 centrosomal protein 131 acts_upstream_of_or_within ISO MGI:3870375 (MGI:5647985|PMID:24415959) RGD PMID:24415959 MGI:5647985 NCBI chr10:109,243,240...109,267,636
Ensembl chr10:109,243,039...109,267,500
JBrowse link
G Cfap157 cilia and flagella associated protein 157 involved_in IBA
ISO
ISS
PMID:21873635
(MGI:5812811|PMID:27965440)
GO_REF:0000024
RGD
UniProt
PMID:27965440, PMID:21873635 GO_REF:0000024 MGI:5812811, RGD:13792537 NCBI chr 3:11,813,575...11,820,549
Ensembl chr 3:11,813,575...11,820,549
JBrowse link
G Cfap206 cilia and flagella associated protein 206 involved_in ISS
ISO
GO_REF:0000024
(MGI:6452763|PMID:32376681)
UniProt
RGD
PMID:32376681 GO_REF:0000024 MGI:6452763 NCBI chr 5:50,148,685...50,193,580
Ensembl chr 5:50,148,658...50,193,571
JBrowse link
G Cfap43 cilia and flagella associated protein 43 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:6140013|MGI:6431400 (MGI:6164072|PMID:29522859), (MGI:6402702|PMID:31884020)
(MGI:6119337|PMID:29449551), (MGI:6140851|PMID:28552195)
(PMID:29449551)
RGD PMID:28552195 PMID:29449551 PMID:29522859 PMID:31884020, PMID:21873635 MGI:6119337 MGI:6140851 MGI:6164072 MGI:6402702, RGD:13792537 NCBI chr 1:267,511,359...267,598,642
Ensembl chr 1:267,511,523...267,598,639
JBrowse link
G Cfap44 cilia and flagella associated protein 44 involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:29449551)
(MGI:6119337|PMID:29449551), (MGI:6140851|PMID:28552195)
MGI:6140014 (MGI:6164072|PMID:29522859)
PMID:21873635
RGD PMID:28552195 PMID:29449551 PMID:29522859, PMID:21873635 MGI:6119337 MGI:6140851 MGI:6164072, RGD:13792537 NCBI chr11:61,160,793...61,237,056
Ensembl chr11:61,162,628...61,234,944
JBrowse link
G Cfap58 cilia and flagella associated protein 58 acts_upstream_of_or_within ISO MGI:6477396 (MGI:6472114|PMID:32791035) RGD PMID:32791035 MGI:6472114 NCBI chr 1:271,292,320...271,400,675
Ensembl chr 1:271,292,390...271,400,597
JBrowse link
G Cfap65 cilia and flagella associated protein 65 involved_in ISO (MGI:6393461|PMID:31571197) RGD PMID:31571197 MGI:6393461 NCBI chr 9:82,163,016...82,197,909
Ensembl chr 9:82,163,075...82,195,722
JBrowse link
G Cfap69 cilia and flagella associated protein 69 acts_upstream_of_or_within ISO MGI:6431857 (MGI:6431182|PMID:30415212)
(PMID:30415212)
RGD PMID:30415212 MGI:6431182 NCBI chr 4:25,538,513...25,611,470
Ensembl chr 4:25,538,497...25,609,652
JBrowse link
G Cfap97d1 CFAP97 domain containing 1 involved_in ISO (MGI:6452255|PMID:32785227) RGD PMID:32785227 MGI:6452255 NCBI chr10:89,918,313...89,930,913
Ensembl chr10:89,918,373...89,923,571
JBrowse link
G Dnah1 dynein, axonemal, heavy chain 1 involved_in ISO
ISS
(PMID:24360805)
GO_REF:0000024
RGD
UniProt
PMID:24360805 GO_REF:0000024 NCBI chr16:7,345,131...7,407,009
Ensembl chr16:7,345,978...7,408,265
JBrowse link
G Fsip2 fibrous sheath-interacting protein 2 acts_upstream_of_or_within_positive_effect ISO (PMID:30137358), (PMID:30745215) RGD PMID:30137358 PMID:30745215 NCBI chr 3:70,285,181...70,356,568
Ensembl chr 3:70,285,219...70,356,568
JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within ISO MGI:2157527 (MGI:4939808|PMID:21337470) RGD PMID:21337470 MGI:4939808 NCBI chr15:37,690,417...37,786,855
Ensembl chr15:37,691,345...37,784,924
JBrowse link
G Iqcg IQ motif containing G involved_in IBA
ISO
ISS
PMID:21873635
(MGI:5608638|PMID:24849454)
GO_REF:0000024
RGD
UniProt
PMID:24849454, PMID:21873635 GO_REF:0000024 MGI:5608638, RGD:13792537 NCBI chr11:70,967,228...71,007,708
Ensembl chr11:70,967,223...71,105,403
JBrowse link
G Meig1 meiosis/spermiogenesis associated 1 acts_upstream_of_or_within ISO MGI:3843498|MGI:4367077 (MGI:5475083|PMID:23258628) RGD PMID:23258628 MGI:5475083 NCBI chr17:78,813,656...78,829,411
Ensembl chr17:78,817,529...78,829,411
JBrowse link
G Mns1 meiosis-specific nuclear structural 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:5318625|PMID:22396656)
Ensembl
RGD
PMID:22396656 GO_REF:0000107 MGI:5318625 NCBI chr 8:79,054,240...79,075,119
Ensembl chr 8:79,054,237...79,075,122
JBrowse link
G Neurl1 neuralized E3 ubiquitin protein ligase 1 acts_upstream_of_or_within ISO MGI:2153143 (MGI:2151733|PMID:11585928) RGD PMID:11585928 MGI:2151733 NCBI chr 1:266,953,006...267,038,879
Ensembl chr 1:266,952,561...267,038,883
JBrowse link
G Pla2g3 phospholipase A2, group III acts_upstream_of_or_within ISO MGI:4461174 (MGI:4459354|PMID:20424323) RGD PMID:20424323 MGI:4459354 NCBI chr14:83,724,828...83,730,614
Ensembl chr14:83,724,933...83,730,614
JBrowse link
G Spag16 sperm associated antigen 16 acts_upstream_of_or_within ISO MGI:3606977 (MGI:3052627|PMID:15328412) RGD PMID:15328412 MGI:3052627 NCBI chr 9:77,027,626...77,833,476
Ensembl chr 9:77,320,726...77,833,281
JBrowse link
G Spag6l sperm associated antigen 6-like acts_upstream_of_or_within ISO MGI:2662475 (MGI:2389554|PMID:12391165) RGD PMID:12391165 MGI:2389554 NCBI chr11:88,424,493...88,517,910
Ensembl chr11:88,424,414...88,508,601
JBrowse link
G Spef2 sperm flagellar 2 involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
IBA
GO_REF:0000024
GO_REF:0000107
MGI:5295267 (MGI:5292446|PMID:21715716)
(PMID:31048344), (PMID:31151990)
PMID:21873635
UniProt
Ensembl
RGD
PMID:21715716 PMID:31048344 PMID:31151990, PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:5292446, RGD:13792537 NCBI chr 2:58,901,937...59,084,194
Ensembl chr 2:58,901,939...59,181,863
Ensembl chr 2:58,901,939...59,181,863
JBrowse link
G Tpgs1 tubulin polyglutamylase complex subunit 1 acts_upstream_of_or_within ISO MGI:2388468 (MGI:2387741|PMID:12242242) RGD PMID:12242242 MGI:2387741 NCBI chr 7:12,912,251...12,918,173
Ensembl chr 7:12,912,263...12,918,173
JBrowse link
G Ttc12 tetratricopeptide repeat domain 12 involved_in ISO (PMID:31978331) RGD PMID:31978331 NCBI chr 8:53,770,685...53,818,873
Ensembl chr 8:53,770,681...53,816,447
JBrowse link
G Ttll1 tubulin tyrosine ligase like 1 acts_upstream_of_or_within ISO MGI:4297933|MGI:4461777 (MGI:4457964|PMID:20498047), (MGI:5430875|PMID:20442420) RGD PMID:20442420 PMID:20498047 MGI:4457964 MGI:5430875 NCBI chr 7:124,338,396...124,367,719
Ensembl chr 7:124,338,395...124,367,630
JBrowse link
G Ttll5 tubulin tyrosine ligase like 5 acts_upstream_of_or_within ISO (MGI:5498425|PMID:23558686) RGD PMID:23558686 MGI:5498425 NCBI chr 6:109,693,915...109,910,479
Ensembl chr 6:109,710,781...109,879,607
JBrowse link
G Ube2b ubiquitin-conjugating enzyme E2B acts_upstream_of_or_within ISO MGI:2183933 (MGI:2668287|PMID:12672659) RGD PMID:12672659 MGI:2668287 NCBI chr10:37,439,947...37,454,867
Ensembl chr10:37,441,284...37,455,022
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19612
    cellular process 18457
      cellular component organization or biogenesis 6724
        cellular component biogenesis 3287
          cellular component assembly 2986
            axoneme assembly 84
              axonemal basal plate assembly 0
              axonemal central apparatus assembly 5
              axonemal dynein complex assembly + 33
              axonemal outer doublet assembly 0
              radial spoke assembly 2
              sperm axoneme assembly 27
Path 2
Term Annotations click to browse term
  biological_process 19612
    cellular process 18457
      cellular component organization or biogenesis 6724
        cellular component biogenesis 3287
          cellular component assembly 2986
            cell projection assembly 605
              plasma membrane bounded cell projection assembly 590
                cilium assembly 375
                  axoneme assembly 84
                    axonemal basal plate assembly 0
                    axonemal central apparatus assembly 5
                    axonemal dynein complex assembly + 33
                    axonemal outer doublet assembly 0
                    radial spoke assembly 2
                    sperm axoneme assembly 27
paths to the root