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ONTOLOGY REPORT - ANNOTATIONS

Term:sodium channel complex
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Accession:GO:0034706 term browser browse the term
Definition:An ion channel complex through which sodium ions pass.


show annotations for term's descendants           Sort by:
sodium channel complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Scn1a sodium voltage-gated channel alpha subunit 1 part_of ISO PR:P97952|PR:Q9JJV9|UniProtKB:Q9WTU3 (PMID:15272007) RGD PMID:15272007 NCBI chr 3:50,952,790...51,071,804
Ensembl chr 3:50,952,791...51,071,699 		JBrowse link
G Scn1b sodium voltage-gated channel beta subunit 1 part_of ISO PR:Q9JJV9|UniProtKB:A2APX8|UniProtKB:Q9WTU3 (PMID:15272007) RGD PMID:15272007 NCBI chr 1:86,353,917...86,363,820
Ensembl chr 1:86,353,917...86,363,739 		JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 part_of ISO PR:P97952|UniProtKB:A2APX8|UniProtKB:Q9WTU3 (PMID:15272007) RGD PMID:15272007 NCBI chr 8:119,220,905...119,318,816
Ensembl chr 8:119,220,905...119,318,769 		JBrowse link
G Scn8a sodium voltage-gated channel alpha subunit 8 part_of ISO PR:P97952|PR:Q9JJV9|UniProtKB:A2APX8 (PMID:15272007) RGD PMID:15272007 NCBI chr 7:131,982,152...132,156,075
Ensembl chr 7:131,982,480...132,151,292 		JBrowse link
G Scnn1a sodium channel epithelial 1 subunit alpha part_of
located_in		 ISO
ISS
IEA
IPI
IBA		 (PMID:24124190)
GO_REF:0000024
GO_REF:0000107
(PMID:16423824), (PMID:21775436)
PMID:12136275
GO_REF:0000033
MGI:104695|MGI:104696 (PMID:10232677), (PMID:17715136), (PMID:32079677)		 RGD
UniProt
Ensembl
GO_Central		 PMID:10232677 PMID:16423824 PMID:17715136 PMID:21775436 PMID:24124190 More... GO_REF:0000024 GO_REF:0000033 GO_REF:0000107, RGD:150521629 NCBI chr 4:158,122,962...158,146,184
Ensembl chr 4:158,122,962...158,146,181 		JBrowse link
G Scnn1b sodium channel epithelial 1 subunit beta part_of
located_in		 IEA
ISO
ISS
IPI
IBA		 GO_REF:0000107
(PMID:24124190)
GO_REF:0000024
(PMID:16423824), (PMID:21775436)
PMID:12136275
GO_REF:0000033
MGI:101782|MGI:104695 (PMID:17715136), (PMID:32079677)		 Ensembl
RGD
UniProt
GO_Central		 PMID:16423824 PMID:17715136 PMID:21775436 PMID:24124190 PMID:32079677 More... GO_REF:0000024 GO_REF:0000033 GO_REF:0000107, RGD:150521629 NCBI chr 1:176,430,063...176,484,451
Ensembl chr 1:176,430,103...176,484,451 		JBrowse link
G Scnn1g sodium channel epithelial 1 subunit gamma part_of
located_in		 IEA
ISO
ISS
IPI
IBA		 GO_REF:0000107
(PMID:24124190)
GO_REF:0000024
(PMID:16423824), (PMID:21775436)
PMID:12136275
GO_REF:0000033
MGI:101782|MGI:104696 (PMID:10232677), (PMID:17715136), (PMID:32079677)		 Ensembl
RGD
UniProt
GO_Central		 PMID:10232677 PMID:16423824 PMID:17715136 PMID:21775436 PMID:24124190 More... GO_REF:0000024 GO_REF:0000033 GO_REF:0000107, RGD:150521629 NCBI chr 1:176,304,942...176,338,816
Ensembl chr 1:176,304,942...176,338,816 		JBrowse link
G Trpm4 transient receptor potential cation channel, subfamily M, member 4 part_of ISO
IEA		 (PMID:27207958)
GO_REF:0000107		 RGD
Ensembl		 PMID:27207958 GO_REF:0000107 NCBI chr 1:95,781,805...95,812,095
Ensembl chr 1:95,782,000...95,812,532 		JBrowse link
G Unc80 unc-80 homolog, NALCN channel complex subunit part_of ISO (MGI:3833159|PMID:19092807) RGD PMID:19092807 MGI:3833159 NCBI chr 9:68,011,940...68,190,135
Ensembl chr 9:68,011,728...68,187,659 		JBrowse link
kainate selective glutamate receptor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gria4 glutamate ionotropic receptor AMPA type subunit 4 part_of IDA PMID:20107073 UniProt PMID:20107073 RGD:8554240 NCBI chr 8:1,562,118...2,035,035
Ensembl chr 8:1,562,119...2,034,979 		JBrowse link
G Grik1 glutamate ionotropic receptor kainate type subunit 1 part_of IEA
IBA
ISO		 GO_REF:0000118
GO_REF:0000033
PR:P39087|PR:Q61626 (PMID:17174564)		 TreeGrafter
GO_Central
RGD		 PMID:17174564 GO_REF:0000033 GO_REF:0000118 NCBI chr11:27,169,739...27,571,131
Ensembl chr11:27,169,740...27,570,645 		JBrowse link
G Grik2 glutamate ionotropic receptor kainate type subunit 2 part_of IEA
IBA
ISO		 GO_REF:0000118
GO_REF:0000033
PR:Q60934|PR:Q61626|PR:Q8BMF5 (PMID:12954862), (PMID:17174564)		 TreeGrafter
GO_Central
RGD		 PMID:12954862 PMID:17174564 GO_REF:0000033 GO_REF:0000118 NCBI chr20:52,135,325...52,833,061
Ensembl chr20:52,133,851...52,838,375 		JBrowse link
G Grik3 glutamate ionotropic receptor kainate type subunit 3 part_of IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 5:137,767,865...137,989,617
Ensembl chr 5:137,767,865...137,984,307 		JBrowse link
G Grik4 glutamate ionotropic receptor kainate type subunit 4 part_of IEA
IBA
ISO		 GO_REF:0000107
GO_REF:0000033
PR:P39087|PR:Q61626 (PMID:12954862)		 Ensembl
GO_Central
RGD		 PMID:12954862 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:42,903,043...43,331,990
Ensembl chr 8:42,905,056...43,193,751 		JBrowse link
G Grik5 glutamate ionotropic receptor kainate type subunit 5 part_of IEA
IBA
ISO		 GO_REF:0000107
GO_REF:0000118
GO_REF:0000033
PR:P39087|PR:Q60934|PR:Q8BMF5 (PMID:12954862), (PMID:17174564)		 Ensembl
TreeGrafter
GO_Central
RGD		 PMID:12954862 PMID:17174564 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:80,605,878...80,667,896
Ensembl chr 1:80,605,892...80,667,125 		JBrowse link
voltage-gated sodium channel complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1g calcium voltage-gated channel subunit alpha1 G part_of IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr10:79,354,998...79,422,960
Ensembl chr10:79,355,008...79,422,752 		JBrowse link
G Cacna1h calcium voltage-gated channel subunit alpha1 H part_of IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr10:14,390,104...14,448,204
Ensembl chr10:14,390,113...14,448,376 		JBrowse link
G Cacna1i calcium voltage-gated channel subunit alpha1 I part_of IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 7:111,835,996...111,947,418
Ensembl chr 7:111,836,012...111,944,688 		JBrowse link
G Scn10a sodium voltage-gated channel alpha subunit 10 part_of ISO
IBA		 (PMID:9839820)
GO_REF:0000033		 RGD
GO_Central		 PMID:9839820 GO_REF:0000033 NCBI chr 8:119,350,723...119,462,882
Ensembl chr 8:119,350,724...119,462,614 		JBrowse link
G Scn11a sodium voltage-gated channel alpha subunit 11 part_of IEA
IBA		 GO_REF:0000104
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000104 NCBI chr 8:119,495,550...119,567,044
Ensembl chr 8:119,496,769...119,567,044 		JBrowse link
G Scn1a sodium voltage-gated channel alpha subunit 1 part_of IDA
IBA
IEA		 GO_REF:0000033
GO_REF:0000104		 GO_Central
UniProt
RGD		 PMID:15664695 GO_REF:0000033 GO_REF:0000104, RGD:1599536 NCBI chr 3:50,952,790...51,071,804
Ensembl chr 3:50,952,791...51,071,699 		JBrowse link
G Scn1b sodium voltage-gated channel beta subunit 1 part_of IDA
IBA
ISO
IEA		 GO_REF:0000033
(PMID:19808477), (PMID:21051419), (PMID:30190309), (PMID:36696443), (PMID:36823201), (PMID:8125980)
GO_REF:0000107
PMID:28012039		 GO_Central
RGD
Ensembl		 PMID:8125980 PMID:19808477 PMID:21051419 PMID:30190309 PMID:36696443 More... GO_REF:0000033 GO_REF:0000107, RGD:729871, RGD:13825439 NCBI chr 1:86,353,917...86,363,820
Ensembl chr 1:86,353,917...86,363,739 		JBrowse link
G Scn2a sodium voltage-gated channel alpha subunit 2 part_of IDA
IBA
IEA		 GO_REF:0000033
PMID:24297919
GO_REF:0000104		 GO_Central
UniProt
RGD		 PMID:2442385 PMID:24297919 PMID:15664695 GO_REF:0000033 GO_REF:0000104, RGD:1299025, RGD:8554774, RGD:1599536 NCBI chr 3:50,302,781...50,437,504
Ensembl chr 3:50,302,877...50,437,214 		JBrowse link
G Scn2b sodium voltage-gated channel beta subunit 2 part_of TAS
IBA
ISS
ISO		 GO_REF:0000033
GO_REF:0000024
(PMID:19808477), (PMID:36823201)		 GO_Central
UniProt
RGD		 PMID:19808477 PMID:36823201 PMID:8521473 GO_REF:0000024 GO_REF:0000033, RGD:729729 NCBI chr 8:45,425,629...45,437,765
Ensembl chr 8:45,425,629...45,437,765 		JBrowse link
G Scn3a sodium voltage-gated channel alpha subunit 3 part_of TAS
IBA
IEA
IDA		 GO_REF:0000033
GO_REF:0000104		 GO_Central
UniProt
RGD		 PMID:14523090 PMID:15664695 GO_REF:0000033 GO_REF:0000104, RGD:734493, RGD:1599536 NCBI chr 3:50,146,411...50,258,119
Ensembl chr 3:50,148,139...50,258,119 		JBrowse link
G Scn3b sodium voltage-gated channel beta subunit 3 part_of IBA
ISO		 GO_REF:0000033
(PMID:20042427), (PMID:21051419), (PMID:24567321)		 GO_Central
RGD		 PMID:20042427 PMID:21051419 PMID:24567321 GO_REF:0000033 NCBI chr 8:40,630,372...40,652,869
Ensembl chr 8:40,630,455...40,652,868 		JBrowse link
G Scn4a sodium voltage-gated channel alpha subunit 4 part_of ISS
IBA
ISO
IEA		 GO_REF:0000024
GO_REF:0000033
(PMID:30190309)
GO_REF:0000104		 UniProt
GO_Central
RGD		 PMID:30190309 GO_REF:0000024 GO_REF:0000033 GO_REF:0000104 NCBI chr10:91,246,936...91,296,670
Ensembl chr10:91,246,936...91,296,545 		JBrowse link
G Scn4b sodium voltage-gated channel beta subunit 4 part_of ISO
IBA
IEA
ISS		 (PMID:12930796), (PMID:17592081), (PMID:24297919)
GO_REF:0000033
GO_REF:0000118
GO_REF:0000024		 RGD
GO_Central
TreeGrafter
UniProt		 PMID:12930796 PMID:17592081 PMID:24297919 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 NCBI chr 8:45,446,580...45,462,294
Ensembl chr 8:45,446,215...45,462,292 		JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 part_of ISS
ISO
IBA
IEA		 GO_REF:0000024
(PMID:19808477), (PMID:20042427), (PMID:21051419), (PMID:24567321)
GO_REF:0000033
GO_REF:0000104		 BHF-UCL
RGD
GO_Central
UniProt		 PMID:19808477 PMID:20042427 PMID:21051419 PMID:24567321 GO_REF:0000024 GO_REF:0000033 GO_REF:0000104 NCBI chr 8:119,220,905...119,318,816
Ensembl chr 8:119,220,905...119,318,769 		JBrowse link
G Scn7a sodium voltage-gated channel alpha subunit 7 NOT|part_of IDA
IBA
IEA		 PMID:9001394
GO_REF:0000033
GO_REF:0000104		 GO_Central
UniProt		 PMID:9001394 GO_REF:0000033 GO_REF:0000104, RGD:61747 NCBI chr 3:51,335,841...51,438,308
Ensembl chr 3:51,335,841...51,438,256 		JBrowse link
G Scn8a sodium voltage-gated channel alpha subunit 8 part_of IDA
IBA
ISO
IEA		 GO_REF:0000033
(PMID:36696443), (PMID:36823201)
GO_REF:0000104		 GO_Central
RGD
UniProt		 PMID:36696443 PMID:36823201 PMID:15664695 GO_REF:0000033 GO_REF:0000104, RGD:1599536 NCBI chr 7:131,982,152...132,156,075
Ensembl chr 7:131,982,480...132,151,292 		JBrowse link
G Scn9a sodium voltage-gated channel alpha subunit 9 part_of IDA
IBA
IEA		 GO_REF:0000033
GO_REF:0000104		 GO_Central
UniProt
RGD		 PMID:15664695 GO_REF:0000033 GO_REF:0000104, RGD:1599536 NCBI chr 3:51,145,148...51,293,342
Ensembl chr 3:51,145,146...51,293,516 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 21254
    protein-containing complex 6911
      membrane protein complex 1445
        transmembrane transporter complex 470
          monoatomic ion channel complex 338
            cation channel complex 207
              sodium channel complex 28
                kainate selective glutamate receptor complex 6
                voltage-gated sodium channel complex 17
Path 2
Term Annotations click to browse term
  cellular_component 21254
    cellular anatomical entity 21098
      membrane 10447
        membrane protein complex 1445
          transmembrane transporter complex 470
            monoatomic ion channel complex 338
              cation channel complex 207
                sodium channel complex 28
                  kainate selective glutamate receptor complex 6
                  voltage-gated sodium channel complex 17
paths to the root