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ONTOLOGY REPORT - ANNOTATIONS

Term:'de novo' NAD biosynthetic process
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Accession:GO:0034627 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of nicotinamide adenine dinucleotide (NAD), beginning with the synthesis of tryptophan or aspartate from simpler precursors; biosynthesis may be of either the oxidized form, NAD, or the reduced form, NADH.


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'de novo' NAD biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nadsyn1 NAD synthetase 1 involved_in ISO
ISS		 (PMID:31883644)
GO_REF:0000024		 RGD
UniProt		 PMID:31883644 GO_REF:0000024 NCBI chr 1:198,981,559...199,009,806
Ensembl chr 1:198,981,604...199,009,869 		JBrowse link
'de novo' NAD biosynthetic process from tryptophan term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afmid arylformamidase involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr10:103,046,129...103,061,718
Ensembl chr10:103,046,180...103,061,718 		JBrowse link
G Haao 3-hydroxyanthranilate 3,4-dioxygenase involved_in IEA
IBA		 GO_REF:0000104
PMID:21873635		 UniProt PMID:21873635 GO_REF:0000104, RGD:13792537 NCBI chr 6:10,845,235...10,864,863
Ensembl chr 6:10,845,771...10,864,877 		JBrowse link
G Ido1 indoleamine 2,3-dioxygenase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:67,430,684...67,442,459
Ensembl chr16:67,430,578...67,442,730 		JBrowse link
G Ido2 indoleamine 2,3-dioxygenase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:67,459,158...67,498,052
Ensembl chr16:67,459,190...67,496,324 		JBrowse link
G Kmo kynurenine 3-monooxygenase involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr13:87,557,080...87,589,334
Ensembl chr13:87,557,286...87,588,881 		JBrowse link
G Kynu kynureninase involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 3:27,778,646...27,929,470
Ensembl chr 3:27,778,772...27,929,488 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18872
    metabolic process 11588
      biosynthetic process 5892
        cellular biosynthetic process 5728
          cellular nitrogen compound biosynthetic process 4825
            pyridine-containing compound biosynthetic process 23
              pyridine nucleotide biosynthetic process 19
                nicotinamide nucleotide biosynthetic process 19
                  NAD biosynthetic process 15
                    'de novo' NAD biosynthetic process 7
                      'de novo' NAD biosynthetic process from aspartate 0
                      'de novo' NAD biosynthetic process from tryptophan + 6
Path 2
Term Annotations click to browse term
  biological_process 18872
    metabolic process 11588
      cellular metabolic process 9824
        cellular aromatic compound metabolic process 5621
          nucleobase-containing compound metabolic process 5389
            nucleobase-containing small molecule metabolic process 602
              nucleoside phosphate metabolic process 536
                nucleotide metabolic process 530
                  nucleotide biosynthetic process 247
                    pyridine nucleotide biosynthetic process 19
                      nicotinamide nucleotide biosynthetic process 19
                        NAD biosynthetic process 15
                          'de novo' NAD biosynthetic process 7
                            'de novo' NAD biosynthetic process from aspartate 0
                            'de novo' NAD biosynthetic process from tryptophan + 6
paths to the root