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ONTOLOGY REPORT - ANNOTATIONS

Term:tooth mineralization
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Accession:GO:0034505 term browser browse the term
Definition:The process in which calcium salts are deposited into calcareous tooth structures such as dental enamel, dentin and cementum.
Synonyms:exact_synonym: tooth calcification

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tooth mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amelx amelogenin X-linked involved_in ISO (PMID:1483698)
(PMID:11406633) 		BHF-UCL PMID:1483698 PMID:11406633 NCBI chrNW_004955544:1,974,889...1,979,063
Ensembl chrNW_004955544:1,969,216...1,979,063 		JBrowse link
G Col1a1 collagen type I alpha 1 chain involved_in ISO (PMID:17118335) UniProt PMID:17118335 NCBI chrNW_004955451:11,468,156...11,484,410
Ensembl chrNW_004955451:11,468,290...11,483,073 		JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:29533727) MGI PMID:29533727 NCBI chrNW_004955436:12,416,147...12,477,214
Ensembl chrNW_004955436:12,415,737...12,480,359 		JBrowse link
G Tspear thrombospondin type laminin G domain and EAR repeats involved_in ISO (PMID:27736875) UniProt PMID:27736875 NCBI chrNW_004955407:41,513,538...41,566,931
Ensembl chrNW_004955407:41,513,829...41,656,564 		JBrowse link
cementum mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alpl alkaline phosphatase, biomineralization associated ISO RGD PMID:17043865 RGD:2316162 NCBI chrNW_004955452:1,820,212...1,873,877
Ensembl chrNW_004955452:1,820,174...1,874,226 		JBrowse link
G Ankh ANKH inorganic pyrophosphate transport regulator involved_in ISO (PMID:31059863) MGI PMID:31059863 NCBI chrNW_004955426:3,992,671...4,130,754
Ensembl chrNW_004955426:3,992,671...4,130,754 		JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:31059863) MGI PMID:31059863 NCBI chrNW_004955436:12,416,147...12,477,214
Ensembl chrNW_004955436:12,415,737...12,480,359 		JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 involved_in ISO (PMID:31059863) MGI PMID:31059863 NCBI chrNW_004955463:14,013,247...14,064,354
Ensembl chrNW_004955463:14,013,247...14,064,111 		JBrowse link
G Hacd1 3-hydroxyacyl-CoA dehydratase 1 involved_in ISO (PMID:25263524) UniProt PMID:25263524 NCBI chrNW_004955429:10,394,046...10,406,945
Ensembl chrNW_004955429:10,384,708...10,406,945 		JBrowse link
G Sp7 Sp7 transcription factor involved_in ISO (PMID:31059863) MGI PMID:31059863 NCBI chrNW_004955458:583,981...602,856
Ensembl chrNW_004955458:583,981...602,856 		JBrowse link
G Wls Wnt ligand secretion mediator involved_in ISO (PMID:31059863) MGI PMID:31059863 NCBI chrNW_004955423:23,374,401...23,465,308
Ensembl chrNW_004955423:23,374,401...23,466,475 		JBrowse link
dentin mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tcirg1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 acts_upstream_of_or_within ISO (PMID:23174213) MGI PMID:23174213 NCBI chrNW_004955422:17,768,469...17,778,976
Ensembl chrNW_004955422:17,768,469...17,779,003 		JBrowse link
enamel mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amelx amelogenin X-linked involved_in ISO (PMID:21653221)
(PMID:26403673)
(PMID:1916828) 		CAFA
ARUK-UCL
BHF-UCL		 PMID:1916828 PMID:21653221 PMID:26403673 NCBI chrNW_004955544:1,974,889...1,979,063
Ensembl chrNW_004955544:1,969,216...1,979,063 		JBrowse link
G Cftr CF transmembrane conductance regulator ISO RGD PMID:31942562 RGD:126928119 NCBI chrNW_004955432:23,179,645...23,328,347
Ensembl chrNW_004955432:23,178,866...23,328,382 		JBrowse link
G Cnnm4 cyclin and CBS domain divalent metal cation transport mediator 4 acts_upstream_of_or_within ISO (PMID:24339795) MGI PMID:24339795 NCBI chrNW_004955470:4,131,348...4,177,172
Ensembl chrNW_004955470:4,131,348...4,177,172 		JBrowse link
G Fam20a FAM20A golgi associated secretory pathway pseudokinase involved_in
acts_upstream_of_or_within 		ISO (PMID:21549343), (PMID:21990045), (PMID:23468644)
(PMID:22732358) 		UniProt
MGI		 PMID:21549343 PMID:21990045 PMID:22732358 PMID:23468644 NCBI chrNW_004955478:4,182,568...4,236,819
Ensembl chrNW_004955478:4,182,568...4,236,819 		JBrowse link
G Fam20c FAM20C golgi associated secretory pathway kinase acts_upstream_of_or_within ISO (PMID:22732358) MGI PMID:22732358 NCBI chrNW_004955460:8,142,325...8,192,044
Ensembl chrNW_004955460:8,143,824...8,193,825 		JBrowse link
G Foxo1 forkhead box O1 ISO RGD PMID:25183529 RGD:10044263 NCBI chrNW_004955431:5,797,359...5,890,758 JBrowse link
G Itgb6 integrin subunit beta 6 acts_upstream_of_or_within ISO (PMID:23264742) MGI PMID:23264742 NCBI chrNW_004955449:13,387,013...13,520,879
Ensembl chrNW_004955449:13,448,084...13,520,879 		JBrowse link
G Msx2 msh homeobox 2 acts_upstream_of_or_within ISO (PMID:10742104) MGI PMID:10742104 NCBI chrNW_004955408:27,323,405...27,329,484
Ensembl chrNW_004955408:27,323,360...27,329,755 		JBrowse link
G Nectin1 nectin cell adhesion molecule 1 acts_upstream_of_or_within ISO (PMID:18703497) MGI PMID:18703497 NCBI chrNW_004955412:20,683,007...20,745,069
Ensembl chrNW_004955412:20,682,861...20,745,069 		JBrowse link
G Ppara peroxisome proliferator activated receptor alpha acts_upstream_of_or_within ISO (PMID:19320717) MGI PMID:19320717 NCBI chrNW_004955413:30,306,563...30,366,245
Ensembl chrNW_004955413:30,307,219...30,359,500 		JBrowse link
G Rogdi rogdi atypical leucine zipper acts_upstream_of_or_within ISO (PMID:38172607) MGI PMID:38172607 NCBI chrNW_004955442:12,694,197...12,700,181
Ensembl chrNW_004955442:12,694,197...12,700,181 		JBrowse link
G Stim1 stromal interaction molecule 1 involved_in ISO (PMID:24621671) UniProt PMID:24621671 NCBI chrNW_004955414:19,652,990...19,849,353
Ensembl chrNW_004955414:19,652,990...19,847,964 		JBrowse link
G Tbx1 T-box transcription factor 1 acts_upstream_of_or_within ISO (PMID:19233155) MGI PMID:19233155 NCBI chrNW_004955442:18,320,674...18,327,062
Ensembl chrNW_004955442:18,319,762...18,325,337 		JBrowse link
G Tcirg1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 acts_upstream_of_or_within ISO (PMID:23174213) MGI PMID:23174213 NCBI chrNW_004955422:17,768,469...17,778,976
Ensembl chrNW_004955422:17,768,469...17,779,003 		JBrowse link
G Wdr72 WD repeat domain 72 acts_upstream_of_or_within ISO (PMID:25008349)
(PMID:26247047) 		MGI PMID:25008349 PMID:26247047 NCBI chrNW_004955409:1,451,506...1,631,976
Ensembl chrNW_004955409:1,467,732...1,674,042 		JBrowse link
negative regulation of tooth mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aspn asporin involved_in ISO (PMID:17522060) UniProt PMID:17522060 NCBI chrNW_004955515:5,322,074...5,345,715
Ensembl chrNW_004955515:5,321,943...5,345,894 		JBrowse link
G Bcor BCL6 corepressor involved_in ISO (PMID:19578371) UniProt PMID:19578371 NCBI chrNW_004955566:1,412,540...1,510,339
Ensembl chrNW_004955566:1,412,540...1,457,329 		JBrowse link
positive regulation of enamel mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amtn amelotin involved_in ISO (PMID:25407797) UniProt PMID:25407797 NCBI chrNW_004955447:2,422,189...2,433,633
Ensembl chrNW_004955447:2,423,136...2,433,150 		JBrowse link
G Cftr CF transmembrane conductance regulator involved_in ISO (PMID:26403673) ARUK-UCL PMID:26403673 NCBI chrNW_004955432:23,179,645...23,328,347
Ensembl chrNW_004955432:23,178,866...23,328,382 		JBrowse link
G Dspp dentin sialophosphoprotein acts_upstream_of_or_within ISO (PMID:16014627) MGI PMID:16014627 NCBI chrNW_004955474:2,254,842...2,259,303 JBrowse link
G Enam enamelin acts_upstream_of_or_within ISO (PMID:24603688) MGI PMID:24603688 NCBI chrNW_004955447:2,331,251...2,345,459
Ensembl chrNW_004955447:2,331,251...2,346,110 		JBrowse link
G Odaph odontogenesis associated phosphoprotein involved_in ISO (PMID:22901946) UniProt PMID:22901946 NCBI chrNW_004955474:1,502,798...1,509,307
Ensembl chrNW_004955474:1,502,791...1,509,294 		JBrowse link
G Slc4a2 solute carrier family 4 member 2 involved_in ISO (PMID:26403673) ARUK-UCL PMID:26403673 NCBI chrNW_004955491:5,498,472...5,513,389
Ensembl chrNW_004955491:5,499,033...5,517,319 		JBrowse link
positive regulation of tooth mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tfap2a transcription factor AP-2 alpha involved_in ISO (PMID:19578371) UniProt PMID:19578371 NCBI chrNW_004955465:3,877,896...3,900,259
Ensembl chrNW_004955465:3,882,549...3,898,929 		JBrowse link
G Wnt6 Wnt family member 6 involved_in ISO (PMID:20113781) BHF-UCL PMID:20113781 NCBI chrNW_004955453:14,547,427...14,560,001
Ensembl chrNW_004955453:14,545,700...14,560,976 		JBrowse link
regulation of enamel mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dicer1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (PMID:20102707) MGI PMID:20102707 NCBI chrNW_004955438:17,374,899...17,431,599
Ensembl chrNW_004955438:17,382,493...17,431,797 		JBrowse link
G Dmp1 dentin matrix acidic phosphoprotein 1 acts_upstream_of_or_within ISO (PMID:16014627) MGI PMID:16014627 NCBI chrNW_004955474:2,188,090...2,200,284 JBrowse link
G Tgfb1 transforming growth factor beta 1 acts_upstream_of ISO (PMID:30243146), (PMID:31336344) MGI PMID:30243146 PMID:31336344 NCBI chrNW_004955555:274,405...288,441
Ensembl chrNW_004955555:270,652...288,441 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12627
    developmental process 5998
      anatomical structure development 5669
        tissue development 1995
          biomineral tissue development 176
            tooth mineralization 36
              cementum mineralization 7
              dentin mineralization 1
              enamel mineralization + 23
              negative regulation of tooth mineralization + 2
              positive regulation of tooth mineralization + 8
              regulation of tooth mineralization + 13
Path 2
Term Annotations click to browse term
  biological_process 12627
    developmental process 5998
      anatomical structure development 5669
        anatomical structure morphogenesis 2600
          animal organ morphogenesis 1056
            odontogenesis 146
              tooth mineralization 36
                cementum mineralization 7
                dentin mineralization 1
                enamel mineralization + 23
                negative regulation of tooth mineralization + 2
                positive regulation of tooth mineralization + 8
                regulation of tooth mineralization + 13
paths to the root