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ONTOLOGY REPORT - ANNOTATIONS

Term:tooth mineralization
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Accession:GO:0034505 term browser browse the term
Definition:The process in which calcium salts are deposited into calcareous tooth structures such as dental enamel, dentin and cementum.
Synonyms:exact_synonym: tooth calcification


show annotations for term's descendants           Sort by:
tooth mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMELX amelogenin X-linked involved_in IEA Ensembl GO_REF:0000107 Ensembl chr  X:11,214,103...11,221,443 JBrowse link
G AMELY amelogenin Y-linked involved_in ISO (PMID:11406633) BHF-UCL PMID:11406633 NCBI chr  X:3,898,819...3,930,686
Ensembl chr  X:11,214,103...11,221,443 		JBrowse link
G COL1A1 collagen type I alpha 1 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:44,274,349...44,291,764
Ensembl chr17:49,150,677...49,166,677 		JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:29533727) MGI PMID:29533727 NCBI chr 6:129,591,858...129,673,000
Ensembl chr 6:133,698,640...133,783,644 		JBrowse link
G TSPEAR thrombospondin type laminin G domain and EAR repeats involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:30,791,051...31,005,330
Ensembl chr21:44,087,591...44,299,041 		JBrowse link
cementum mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALPL alkaline phosphatase, biomineralization associated ISO RGD PMID:17043865 RGD:2316162 NCBI chr 1:20,702,509...20,772,301
Ensembl chr 1:21,667,732...21,736,688 		JBrowse link
G ANKH ANKH inorganic pyrophosphate transport regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:15,014,019...15,175,467
Ensembl chr 5:14,855,914...14,917,729 		JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:31059863) MGI PMID:31059863 NCBI chr 6:129,591,858...129,673,000
Ensembl chr 6:133,698,640...133,783,644 		JBrowse link
G FGFR1 fibroblast growth factor receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:37,713,133...37,773,098
Ensembl chr 8:34,890,147...34,948,904 		JBrowse link
G HACD1 3-hydroxyacyl-CoA dehydratase 1 involved_in ISO (PMID:25263524) UniProt PMID:25263524 NCBI chr10:17,911,158...17,940,075
Ensembl chr10:18,183,125...18,209,361 		JBrowse link
G SP7 Sp7 transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:35,409,055...35,427,871
Ensembl chr12:36,199,673...36,209,494 		JBrowse link
G WLS Wnt ligand secretion mediator involved_in ISO (PMID:31059863) MGI PMID:31059863 NCBI chr 1:67,336,009...67,470,265
Ensembl chr 1:69,318,742...69,425,652 		JBrowse link
dentin mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TCIRG1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:63,120,913...63,132,831
Ensembl chr11:66,429,435...66,441,327 		JBrowse link
enamel mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMELX amelogenin X-linked involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 Ensembl chr  X:11,214,103...11,221,443 JBrowse link
G AMELY amelogenin Y-linked involved_in ISO (PMID:26403673)
(PMID:21653221) 		ARUK-UCL
CAFA		 PMID:21653221 PMID:26403673 NCBI chr  X:3,898,819...3,930,686
Ensembl chr  X:11,214,103...11,221,443 		JBrowse link
G CFTR CF transmembrane conductance regulator ISO RGD PMID:31942562 RGD:126928119 NCBI chr 7:109,449,847...109,633,023
Ensembl chr 7:122,129,798...122,327,864 		JBrowse link
G CNNM4 cyclin and CBS domain divalent metal cation transport mediator 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2A:102,503,084...102,553,029
Ensembl chr2A:97,682,724...97,731,584 		JBrowse link
G FAM20A FAM20A golgi associated secretory pathway pseudokinase involved_in
acts_upstream_of_or_within 		IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr17:62,474,317...62,537,800
Ensembl chr17:67,864,331...67,927,128 		JBrowse link
G FAM20C FAM20C golgi associated secretory pathway kinase acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:22732358) MGI
TreeGrafter		 PMID:22732358 GO_REF:0000118 NCBI chr 7:311,468...394,623 JBrowse link
G FOXO1 forkhead box O1 ISO RGD PMID:25183529 RGD:10044263 NCBI chr13:21,763,729...21,874,279 JBrowse link
G ITGB6 integrin subunit beta 6 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr2B:47,386,913...47,496,491
Ensembl chr2B:164,764,251...164,867,426 		JBrowse link
G MSX2 msh homeobox 2 acts_upstream_of_or_within ISO (PMID:10742104) MGI PMID:10742104 NCBI chr 5:170,063,137...170,070,226
Ensembl chr 5:176,967,902...176,976,609 		JBrowse link
G NECTIN1 nectin cell adhesion molecule 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:114,497,177...114,565,338
Ensembl chr11:118,401,321...118,493,090 		JBrowse link
G PPARA peroxisome proliferator activated receptor alpha acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr22:45,218,364...45,302,970 JBrowse link
G ROGDI rogdi atypical leucine zipper acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr16:3,721,063...3,727,056
Ensembl chr16:4,887,051...4,892,607 		JBrowse link
G STIM1 stromal interaction molecule 1 involved_in ISO (PMID:24621671) UniProt PMID:24621671 NCBI chr11:3,726,501...3,954,951
Ensembl chr11:3,840,513...4,065,224 		JBrowse link
G TBX1 T-box transcription factor 1 acts_upstream_of_or_within ISO (PMID:19233155) MGI PMID:19233155 NCBI chr22:2,521,080...2,541,267 JBrowse link
G TCIRG1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:63,120,913...63,132,831
Ensembl chr11:66,429,435...66,441,327 		JBrowse link
G WDR72 WD repeat domain 72 acts_upstream_of_or_within ISO (PMID:25008349)
(PMID:26247047) 		MGI PMID:25008349 PMID:26247047 NCBI chr15:32,449,840...32,695,815
Ensembl chr15:50,775,112...51,023,853 		JBrowse link
negative regulation of tooth mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASPN asporin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:63,579,188...63,605,811
Ensembl chr 9:91,651,629...91,677,969 		JBrowse link
G BCOR BCL6 corepressor involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:32,497,931...32,624,307
Ensembl chr  X:40,202,235...40,249,986 		JBrowse link
positive regulation of enamel mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMTN amelotin involved_in IEA Ensembl
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:53,691,674...53,705,831
Ensembl chr 4:60,036,818...60,050,965 		JBrowse link
G CFTR CF transmembrane conductance regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:109,449,847...109,633,023
Ensembl chr 7:122,129,798...122,327,864 		JBrowse link
G DSPP dentin sialophosphoprotein acts_upstream_of_or_within ISO (PMID:16014627) MGI PMID:16014627 NCBI chr 4:79,903,923...79,909,836 JBrowse link
G ENAM enamelin acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:24603688) MGI
TreeGrafter		 PMID:24603688 GO_REF:0000118 NCBI chr 4:53,574,316...53,592,465
Ensembl chr 4:59,920,000...59,938,884 		JBrowse link
G ODAPH odontogenesis associated phosphoprotein involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:48,640,355...48,649,546
Ensembl chr 4:54,471,278...54,484,548 		JBrowse link
G SLC4A2 solute carrier family 4 member 2 involved_in ISO (PMID:26403673) ARUK-UCL PMID:26403673 NCBI chr 7:142,646,413...142,663,376
Ensembl chr 7:154,799,256...154,815,919 		JBrowse link
positive regulation of tooth mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TFAP2A transcription factor AP-2 alpha involved_in ISO (PMID:19578371) UniProt PMID:19578371 NCBI chr 6:10,237,834...10,260,843 JBrowse link
G WNT6 Wnt family member 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:106,119,740...106,134,317
Ensembl chr2B:224,714,229...224,728,171 		JBrowse link
regulation of enamel mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DICER1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (PMID:20102707) MGI PMID:20102707 NCBI chr14:75,709,029...75,780,779
Ensembl chr14:95,036,385...95,107,940 		JBrowse link
G DMP1 dentin matrix acidic phosphoprotein 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 4:79,943,709...79,957,430
Ensembl chr 4:90,675,812...90,682,314 		JBrowse link
G TGFB1 transforming growth factor beta 1 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr19:38,324,009...38,347,003
Ensembl chr19:46,831,659...46,852,973 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19315
    developmental process 6695
      anatomical structure development 6275
        tissue development 2204
          biomineral tissue development 189
            tooth mineralization 37
              cementum mineralization 7
              dentin mineralization 1
              enamel mineralization + 24
              negative regulation of tooth mineralization + 2
              positive regulation of tooth mineralization + 8
              regulation of tooth mineralization + 13
Path 2
Term Annotations click to browse term
  biological_process 19315
    developmental process 6695
      anatomical structure development 6275
        anatomical structure morphogenesis 2857
          animal organ morphogenesis 1137
            odontogenesis 154
              tooth mineralization 37
                cementum mineralization 7
                dentin mineralization 1
                enamel mineralization + 24
                negative regulation of tooth mineralization + 2
                positive regulation of tooth mineralization + 8
                regulation of tooth mineralization + 13
paths to the root