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ONTOLOGY REPORT - ANNOTATIONS


Term:protein localization to chromosome
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Accession:GO:0034502 term browser browse the term
Definition:Any process in which a protein is transported to, or maintained at, a specific location on a chromosome.
Synonyms:exact_synonym: protein localisation to chromosome
 narrow_synonym: condensin localization to chromosome


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protein localization to chromosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rpa1 replication protein A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936538:7,941,074...7,997,062
Ensembl chrNW_004936538:7,946,403...7,994,864
JBrowse link
G Rpa2 replication protein A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:12,127,026...12,147,120
Ensembl chrNW_004936474:12,126,245...12,147,130
JBrowse link
G Scml2 Scm polycomb group protein like 2 acts_upstream_of_or_within ISO (PMID:25634095) MGI PMID:25634095 NCBI chrNW_004936470:7,457,995...7,508,069
Ensembl chrNW_004936470:7,458,007...7,508,069
JBrowse link
G Spo11 SPO11 initiator of meiotic double strand breaks involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20551173) Ensembl
MGI
PMID:20551173 GO_REF:0000107 NCBI chrNW_004936530:183,271...197,549
Ensembl chrNW_004936530:183,271...197,335
JBrowse link
G Stag3 STAG3 cohesin complex component involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24797475) Ensembl
MGI
PMID:24797475 GO_REF:0000107 NCBI chrNW_004936543:430,804...458,112
Ensembl chrNW_004936543:432,552...458,112
JBrowse link
G Tex15 testis expressed 15, meiosis and synapsis associated acts_upstream_of_or_within ISO (PMID:18283110) MGI PMID:18283110 NCBI chrNW_004936792:668,290...727,197
Ensembl chrNW_004936792:668,290...686,241
JBrowse link
G Ttk TTK protein kinase acts_upstream_of_or_within ISO (PMID:21558374) MGI PMID:21558374 NCBI chrNW_004936510:10,176,968...10,213,483 JBrowse link
chromosome passenger complex localization to kinetochore term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rcc2 regulator of chromosome condensation 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:4,265,572...4,307,283
Ensembl chrNW_004936474:4,265,578...4,281,364
JBrowse link
establishment of protein localization to chromatin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctcfl CCCTC-binding factor like involved_in ISO (PMID:18765639) UniProt PMID:18765639 NCBI chrNW_004936530:312,630...335,929 JBrowse link
G H1-5 H1.5 linker histone, cluster member involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936671:3,163,792...3,164,532
Ensembl chrNW_004936671:3,163,825...3,164,505
JBrowse link
G LOC101956559 core histone macro-H2A.2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:8,474,408...8,509,269
Ensembl chrNW_004936521:8,473,794...8,509,268
JBrowse link
G LOC101971629 core histone macro-H2A.1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936597:2,496,489...2,556,352
Ensembl chrNW_004936597:2,495,862...2,556,603
JBrowse link
G Lrwd1 leucine rich repeats and WD repeat domain containing 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936543:1,889,072...1,895,643
Ensembl chrNW_004936543:1,888,768...1,896,966
JBrowse link
G Nipbl NIPBL cohesin loading factor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936518:4,870,686...5,041,099
Ensembl chrNW_004936518:4,869,546...4,969,450
JBrowse link
G Ruvbl2 RuvB like AAA ATPase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936664:2,995,212...3,010,563
Ensembl chrNW_004936664:2,995,213...3,010,853
JBrowse link
G Wbp2 WW domain binding protein 2 involved_in ISO (PMID:23233354) UniProt PMID:23233354 NCBI chrNW_004936594:1,023,085...1,031,571 JBrowse link
establishment of protein localization to telomere term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acd ACD shelterin complex subunit and telomerase recruitment factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:18,049,134...18,052,123
Ensembl chrNW_004936475:18,045,662...18,052,172
JBrowse link
G Brca2 BRCA2 DNA repair associated involved_in ISO (PMID:21076401)
(MGI:5707585|PMID:21076401)
BHF-UCL PMID:21076401 MGI:5707585 NCBI chrNW_004936472:26,945,659...27,017,693 JBrowse link
G Nabp2 nucleic acid binding protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936646:632,390...638,900
Ensembl chrNW_004936646:632,121...639,868
JBrowse link
G Pot1 protection of telomeres 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936605:836,824...919,099
Ensembl chrNW_004936605:836,769...920,201
JBrowse link
G Spdya speedy/RINGO cell cycle regulator family member A involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:28031483) Ensembl
MGI
PMID:28031483 GO_REF:0000107 NCBI chrNW_004936493:3,937,297...3,967,884
Ensembl chrNW_004936493:3,935,146...3,969,053
JBrowse link
G Tert telomerase reverse transcriptase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936815:468,987...492,666
Ensembl chrNW_004936815:469,020...491,697
JBrowse link
G Znf827 zinc finger protein 827 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936535:3,282,572...3,445,277
Ensembl chrNW_004936535:3,282,586...3,447,435
JBrowse link
mitotic cohesin loading term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nipbl NIPBL cohesin loading factor involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936518:4,870,686...5,041,099
Ensembl chrNW_004936518:4,869,546...4,969,450
JBrowse link
negative regulation of establishment of protein localization to telomere term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Terf1 telomeric repeat binding factor 1 involved_in ISO (PMID:25589350) BHF-UCL PMID:25589350 NCBI chrNW_004936648:1,809,395...1,835,890 JBrowse link
negative regulation of protein localization to chromatin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk9 cyclin dependent kinase 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:15,446,864...15,450,750
Ensembl chrNW_004936487:15,446,858...15,452,796
JBrowse link
G Pias4 protein inhibitor of activated STAT 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:2,287,941...2,302,875
Ensembl chrNW_004936588:2,287,996...2,302,691
JBrowse link
G Rnf4 ring finger protein 4 involved_in ISO (PMID:35013556) UniProt PMID:35013556 NCBI chrNW_004936477:21,025,040...21,055,821 JBrowse link
G Sirt6 sirtuin 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:2,387,162...2,394,066
Ensembl chrNW_004936588:2,386,977...2,394,096
JBrowse link
G Spi1 Spi-1 proto-oncogene involved_in ISO (MGI:6381024|PMID:30911105) ARUK-UCL PMID:30911105 MGI:6381024 NCBI chrNW_004936562:1,852,759...1,870,647
Ensembl chrNW_004936562:1,852,740...1,870,472
JBrowse link
G Vcp valosin containing protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936524:3,085,959...3,102,461
Ensembl chrNW_004936524:3,085,500...3,102,466
JBrowse link
negative regulation of protein localization to chromosome, telomeric region term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101971629 core histone macro-H2A.1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936597:2,496,489...2,556,352
Ensembl chrNW_004936597:2,495,862...2,556,603
JBrowse link
positive regulation of establishment of protein localization to telomere term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cct2 chaperonin containing TCP1 subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936545:7,416,257...7,436,024
Ensembl chrNW_004936545:7,415,753...7,439,800
JBrowse link
G Cct3 chaperonin containing TCP1 subunit 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:5,537,338...5,554,384
Ensembl chrNW_004936580:5,537,015...5,554,384
JBrowse link
G Cct4 chaperonin containing TCP1 subunit 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936491:7,224,989...7,241,348
Ensembl chrNW_004936491:7,224,692...7,241,358
JBrowse link
G Cct5 chaperonin containing TCP1 subunit 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936643:2,354,799...2,368,048
Ensembl chrNW_004936643:2,354,799...2,368,048
JBrowse link
G Cct6a chaperonin containing TCP1 subunit 6A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936543:7,887,511...7,900,174
Ensembl chrNW_004936543:7,887,414...7,900,200
JBrowse link
G Cct7 chaperonin containing TCP1 subunit 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936491:17,017,687...17,033,526
Ensembl chrNW_004936491:17,017,687...17,033,855
JBrowse link
G Cct8 chaperonin containing TCP1 subunit 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936500:12,949,563...12,962,699
Ensembl chrNW_004936500:12,949,563...12,965,064
JBrowse link
G Dkc1 dyskerin pseudouridine synthase 1 involved_in ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chrNW_004936927:134,770...144,057 JBrowse link
G Tcp1 t-complex 1 involved_in ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chrNW_004936489:11,273,335...11,282,811 JBrowse link
G Wrap53 WD repeat containing antisense to TP53 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936595:936,184...952,784
Ensembl chrNW_004936595:936,487...952,791
JBrowse link
positive regulation of protein localization to chromatin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk9 cyclin dependent kinase 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:15,446,864...15,450,750
Ensembl chrNW_004936487:15,446,858...15,452,796
JBrowse link
G Sirt6 sirtuin 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:2,387,162...2,394,066
Ensembl chrNW_004936588:2,386,977...2,394,096
JBrowse link
G Vrk1 VRK serine/threonine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936604:1,011,048...1,097,388
Ensembl chrNW_004936604:1,011,052...1,097,403
JBrowse link
positive regulation of protein localization to chromosome, telomeric region term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gnl3 G protein nucleolar 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:3,476,436...3,483,868
Ensembl chrNW_004936473:3,476,392...3,483,615
JBrowse link
G Gnl3l G protein nucleolar 3 like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936751:1,423,822...1,457,257
Ensembl chrNW_004936751:1,423,804...1,459,998
JBrowse link
G Pml PML nuclear body scaffold involved_in ISO (PMID:22641345) BHF-UCL PMID:22641345 NCBI chrNW_004936471:33,135,186...33,173,218
Ensembl chrNW_004936471:33,135,164...33,177,666
JBrowse link
positive regulation of protein localization to kinetochore term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cenpq centromere protein Q involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:11,189,336...11,208,154
Ensembl chrNW_004936476:11,190,535...11,201,011
JBrowse link
G Trappc12 trafficking protein particle complex subunit 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936532:1,613,181...1,674,556
Ensembl chrNW_004936532:1,613,966...1,674,914
JBrowse link
protein localization to chromatin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aplf aprataxin and PNKP like factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936491:12,857,928...12,961,709
Ensembl chrNW_004936491:12,857,785...12,962,376
JBrowse link
G Brd2 bromodomain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:25,807,179...25,818,914
Ensembl chrNW_004936476:25,807,163...25,818,899
JBrowse link
G Brd3 bromodomain containing 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936669:2,993,284...3,023,185
Ensembl chrNW_004936669:2,993,187...3,021,200
JBrowse link
G Carm1 coactivator associated arginine methyltransferase 1 acts_upstream_of_or_within ISO (PMID:15616592) MGI PMID:15616592 NCBI chrNW_004936659:1,071,883...1,120,917
Ensembl chrNW_004936659:1,090,164...1,123,920
JBrowse link
G Chmp7 charged multivesicular body protein 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936555:6,730,284...6,757,816
Ensembl chrNW_004936555:6,745,738...6,756,467
JBrowse link
G Daxx death domain associated protein involved_in ISO (MGI:5882889|PMID:17081986) CAFA PMID:17081986 MGI:5882889 NCBI chrNW_004936476:25,546,091...25,550,390
Ensembl chrNW_004936476:25,546,036...25,550,392
JBrowse link
G Esco2 establishment of sister chromatid cohesion N-acetyltransferase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22101327) Ensembl
MGI
PMID:22101327 GO_REF:0000107 NCBI chrNW_004936675:670,915...697,696
Ensembl chrNW_004936675:670,915...697,668
JBrowse link
G Esr1 estrogen receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936489:4,616,839...4,887,179
Ensembl chrNW_004936489:4,614,754...4,887,171
JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18311137) Ensembl
MGI
PMID:18311137 GO_REF:0000107 NCBI chrNW_004936527:5,024,077...5,069,152
Ensembl chrNW_004936527:5,024,068...5,063,939
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936818:453,635...569,194
Ensembl chrNW_004936818:453,635...567,469
JBrowse link
G Lemd2 LEM domain nuclear envelope protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:25,170,954...25,188,298
Ensembl chrNW_004936476:25,170,973...25,186,965
JBrowse link
G LOC101969524 protein FAM47E involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936676:263,974...287,742
Ensembl chrNW_004936676:263,704...287,761
JBrowse link
G Mcm8 minichromosome maintenance 8 homologous recombination repair factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936485:13,072,791...13,108,392
Ensembl chrNW_004936485:13,072,600...13,108,411
JBrowse link
G Mcm9 minichromosome maintenance 9 homologous recombination repair factor involved_in ISO (PMID:23401855), (PMID:26300262) UniProt PMID:23401855 PMID:26300262 NCBI chrNW_004936658:1,657,226...1,734,150 JBrowse link
G Mms22l MMS22 like, DNA repair protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936699:486,510...608,532
Ensembl chrNW_004936699:486,491...608,562
JBrowse link
G Mrnip MRN complex interacting protein involved_in ISO (PMID:27568553) UniProt PMID:27568553 NCBI chrNW_004936739:926,678...955,024 JBrowse link
G Msh2 mutS homolog 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936508:4,943,987...5,013,356
Ensembl chrNW_004936508:4,944,007...5,013,356
JBrowse link
G Parp1 poly(ADP-ribose) polymerase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936526:3,102,468...3,147,601
Ensembl chrNW_004936526:3,102,039...3,147,642
JBrowse link
G Plk1 polo like kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:8,321,415...8,332,414
Ensembl chrNW_004936501:8,321,305...8,332,424
JBrowse link
G Rad21 RAD21 cohesin complex component involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:29,377,793...29,403,422
Ensembl chrNW_004936470:29,377,734...29,407,312
JBrowse link
G Tonsl tonsoku like, DNA repair protein involved_in ISO (PMID:27338793) UniProt PMID:27338793 NCBI chrNW_004936470:7,817,444...7,829,124 JBrowse link
G Wapl WAPL cohesin release factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936804:354,201...431,655
Ensembl chrNW_004936804:354,195...431,830
JBrowse link
G Zmynd8 zinc finger MYND-type containing 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936514:6,116,789...6,214,383
Ensembl chrNW_004936514:6,116,676...6,212,996
JBrowse link
protein localization to chromosome, centromeric region term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bod1 biorientation of chromosomes in cell division 1 involved_in ISO (PMID:17938248), (PMID:24157919) UniProt PMID:17938248 PMID:24157919 NCBI chrNW_004936609:2,034,271...2,096,274 JBrowse link
G Bub1b BUB1 mitotic checkpoint serine/threonine kinase B involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19283064) Ensembl
MGI
PMID:19283064 GO_REF:0000107 NCBI chrNW_004936471:3,631,760...3,696,024
Ensembl chrNW_004936471:3,633,536...3,695,684
JBrowse link
G Cenpa centromere protein A involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22516971) Ensembl
MGI
PMID:22516971 GO_REF:0000107 NCBI chrNW_004936493:5,715,274...5,720,816
Ensembl chrNW_004936493:5,714,782...5,720,837
JBrowse link
G Ctcf CCCTC-binding factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:17,987,137...18,031,733
Ensembl chrNW_004936475:17,987,156...18,031,760
JBrowse link
G Haspin histone H3 associated protein kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936677:401,198...404,472
Ensembl chrNW_004936677:401,395...403,713
JBrowse link
G Mis18a MIS18 kinetochore protein A acts_upstream_of_or_within ISO (PMID:22516971) MGI PMID:22516971 NCBI chrNW_004936500:9,822,366...9,832,732
Ensembl chrNW_004936500:9,822,381...9,832,561
JBrowse link
G Rb1 RB transcriptional corepressor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936565:1,596,227...1,746,706
Ensembl chrNW_004936565:1,597,593...1,746,846
JBrowse link
G Smc5 structural maintenance of chromosomes 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:26919979) Ensembl
MGI
PMID:26919979 GO_REF:0000107 NCBI chrNW_004936503:6,388,556...6,483,293
Ensembl chrNW_004936503:6,388,487...6,483,333
JBrowse link
protein localization to chromosome, telomeric region term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acd ACD shelterin complex subunit and telomerase recruitment factor involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936475:18,049,134...18,052,123
Ensembl chrNW_004936475:18,045,662...18,052,172
JBrowse link
G Atr ATR serine/threonine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936540:4,074,543...4,178,859
Ensembl chrNW_004936540:4,074,570...4,178,898
JBrowse link
G Atrx ATRX chromatin remodeler involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936683:2,496,307...2,718,539
Ensembl chrNW_004936683:2,495,959...2,718,620
JBrowse link
G Pinx1 PIN2 (TERF1) interacting telomerase inhibitor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936675:2,641,851...2,706,201
Ensembl chrNW_004936675:2,640,068...2,706,238
JBrowse link
G Psmd10 proteasome 26S subunit, non-ATPase 10 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936499:6,691,758...6,698,515
Ensembl chrNW_004936499:6,691,476...6,702,986
JBrowse link
G Terf2 telomeric repeat binding factor 2 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936475:19,469,501...19,498,494
Ensembl chrNW_004936475:19,468,702...19,498,793
JBrowse link
G Terf2ip TERF2 interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:24,312,140...24,319,492
Ensembl chrNW_004936475:24,312,101...24,320,543
JBrowse link
G Tinf2 TERF1 interacting nuclear factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936722:320,171...323,703
Ensembl chrNW_004936722:320,917...324,492
JBrowse link
G Tnks tankyrase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936573:788,909...993,453
Ensembl chrNW_004936573:794,184...994,247
JBrowse link
G Tnks2 tankyrase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936601:2,776,338...2,837,703
Ensembl chrNW_004936601:2,776,345...2,837,707
JBrowse link
G Tpp1 tripeptidyl peptidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936842:669,869...676,706
Ensembl chrNW_004936842:669,863...676,720
JBrowse link
protein localization to heterochromatin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pphln1 periphilin 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936512:1,001,733...1,158,647
Ensembl chrNW_004936512:1,057,128...1,158,650
JBrowse link
G Tasor transcription activation suppressor involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936473:7,053,797...7,098,608
Ensembl chrNW_004936473:7,055,462...7,098,358
JBrowse link
protein localization to kinetochore term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aurkb aurora kinase B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936595:1,435,601...1,437,423
Ensembl chrNW_004936595:1,435,852...1,440,351
JBrowse link
G Bub3 BUB3 mitotic checkpoint protein involved_in ISO (PMID:9660858) UniProt PMID:9660858 NCBI chrNW_004936486:11,796,066...11,807,826 JBrowse link
G Cdk1 cyclin dependent kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936614:2,300,682...2,313,611
Ensembl chrNW_004936614:2,300,513...2,313,624
JBrowse link
G Champ1 chromosome alignment maintaining phosphoprotein 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004937030:268,400...279,341
Ensembl chrNW_004937030:274,074...276,515
JBrowse link
G Ik IK cytokine involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936531:9,589,035...9,601,266
Ensembl chrNW_004936531:9,588,555...9,601,293
JBrowse link
G Knl1 kinetochore scaffold 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:22331848) MGI
TreeGrafter
InterPro
Ensembl
PMID:22331848 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936471:4,079,877...4,110,205
Ensembl chrNW_004936471:4,059,995...4,109,413
JBrowse link
G Mtbp MDM2 binding protein acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:21274008) MGI
TreeGrafter
Ensembl
PMID:21274008 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936470:26,312,670...26,386,410
Ensembl chrNW_004936470:26,312,590...26,386,427
JBrowse link
G Spdl1 spindle apparatus coiled-coil protein 1 involved_in ISO (PMID:19468067) UniProt PMID:19468067 NCBI chrNW_004936688:840,345...841,808 JBrowse link
G Ttk TTK protein kinase acts_upstream_of_or_within ISO (PMID:21558374) MGI PMID:21558374 NCBI chrNW_004936510:10,176,968...10,213,483 JBrowse link
G Zw10 zw10 kinetochore protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936612:825,419...860,971
Ensembl chrNW_004936612:825,419...860,971
JBrowse link
G Zwilch zwilch kinetochore protein involved_in IEA Ensembl
TreeGrafter
UniProt
GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936471:26,642,321...26,674,475
Ensembl chrNW_004936471:26,642,352...26,677,684
JBrowse link
protein localization to kinetochore involved in kinetochore assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kntc1 kinetochore associated 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936558:1,936,946...2,016,474
Ensembl chrNW_004936558:1,937,048...2,016,447
JBrowse link
protein localization to pericentric heterochromatin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Jarid2 jumonji and AT-rich interaction domain containing 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:27892467) Ensembl
MGI
PMID:27892467 GO_REF:0000107 NCBI chrNW_004936552:1,566,382...1,786,837
Ensembl chrNW_004936552:1,566,788...1,785,490
JBrowse link
protein localization to site of double-strand break term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brme1 break repair meiotic recombinase recruitment factor 1 involved_in ISO (PMID:32345962), (PMID:32460033), (PMID:32463460) MGI PMID:32345962 PMID:32460033 PMID:32463460 NCBI chrNW_004936659:2,595,052...2,611,490
Ensembl chrNW_004936659:2,594,977...2,611,558
JBrowse link
G Fam178b family with sequence similarity 178 member B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936744:808,845...894,128
Ensembl chrNW_004936744:810,446...893,049
JBrowse link
G Htatsf1 HIV-1 Tat specific factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936513:10,762,417...10,779,641
Ensembl chrNW_004936513:10,762,398...10,779,374
JBrowse link
G Iffo1 intermediate filament family orphan 1 involved_in ISO (PMID:31548606) UniProt PMID:31548606 NCBI chrNW_004936709:1,228,589...1,242,349
Ensembl chrNW_004936709:1,228,606...1,242,349
JBrowse link
G LOC101966907 histone H2AX involved_in ISO (PMID:12419185), (PMID:30952868) UniProt PMID:12419185 PMID:30952868 NCBI chrNW_004936542:4,046,930...4,049,017
Ensembl chrNW_004936542:4,047,915...4,048,346
JBrowse link
G Mdc1 mediator of DNA damage checkpoint 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936837:363,870...379,406
Ensembl chrNW_004936837:362,928...378,759
JBrowse link
G Nbn nibrin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936544:3,773,828...3,812,673
Ensembl chrNW_004936544:3,775,220...3,808,837
JBrowse link
G Parp3 poly(ADP-ribose) polymerase family member 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:21211721) MGI
Ensembl
PMID:21211721 GO_REF:0000107 NCBI chrNW_004936529:3,291,282...3,297,581
Ensembl chrNW_004936529:3,291,269...3,299,992
JBrowse link
G Rad17 RAD17 checkpoint clamp loader component involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936480:216,216...252,178
Ensembl chrNW_004936480:216,208...252,070
JBrowse link
G Rhno1 RAD9-HUS1-RAD1 interacting nuclear orphan 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936606:3,201,540...3,208,019
Ensembl chrNW_004936606:3,201,504...3,208,342
JBrowse link
G Rpa1 replication protein A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936538:7,941,074...7,997,062
Ensembl chrNW_004936538:7,946,403...7,994,864
JBrowse link
G Sirt6 sirtuin 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:2,387,162...2,394,066
Ensembl chrNW_004936588:2,386,977...2,394,096
JBrowse link
G Slf1 SMC5-SMC6 complex localization factor 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936523:8,563,662...8,634,576
Ensembl chrNW_004936523:8,563,410...8,634,585
JBrowse link
G Slf2 SMC5-SMC6 complex localization factor 2 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936600:4,715,504...4,766,273
Ensembl chrNW_004936600:4,721,327...4,765,915
JBrowse link
G Topbp1 DNA topoisomerase II binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:6,788,713...6,841,824
Ensembl chrNW_004936529:6,788,187...6,841,888
JBrowse link
G Tp53bp1 tumor protein p53 binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:6,589,395...6,668,242
Ensembl chrNW_004936471:6,589,564...6,668,305
JBrowse link
G Xrcc4 X-ray repair cross complementing 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:2,248,367...2,495,215
Ensembl chrNW_004936469:2,248,039...2,495,226
JBrowse link
regulation of cohesin loading term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wapl WAPL cohesin release factor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936804:354,201...431,655
Ensembl chrNW_004936804:354,195...431,830
JBrowse link
regulation of establishment of protein localization to chromosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Spidr scaffold protein involved in DNA repair involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936590:4,921,755...5,041,573
Ensembl chrNW_004936590:4,921,542...5,316,195
JBrowse link
regulation of protein localization to chromatin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Setd2 SET domain containing 2, histone lysine methyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936596:795,940...898,823
Ensembl chrNW_004936596:796,601...883,373
JBrowse link
G Vcp valosin containing protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936524:3,085,959...3,102,461
Ensembl chrNW_004936524:3,085,500...3,102,466
JBrowse link
G Vcpip1 valosin containing protein interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936496:7,352,043...7,376,023
Ensembl chrNW_004936496:7,352,018...7,376,964
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15969
    localization 5176
      macromolecule localization 2916
        cellular macromolecule localization 2495
          protein localization 2483
            protein localization to organelle 1033
              protein localization to chromosome 119
                establishment of protein localization to chromosome + 27
                protein localization to chromatin + 43
                protein localization to chromosome, centromeric region + 24
                protein localization to chromosome, telomeric region + 32
                protein localization to condensed chromosome + 15
                protein localization to nucleolar rDNA repeats 0
                protein localization to site of double-strand break 17
paths to the root