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ONTOLOGY REPORT - ANNOTATIONS


Term:protein localization to chromosome
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Accession:GO:0034502 term browser browse the term
Definition:Any process in which a protein is transported to, or maintained at, a specific location on a chromosome.
Synonyms:exact_synonym: protein localisation to chromosome
 narrow_synonym: condensin localization to chromosome


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protein localization to chromosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RPA1 replication protein A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:1,470,375...1,537,603
Ensembl chr16:1,470,474...1,539,246
JBrowse link
G RPA2 replication protein A2 involved_in ISO (PMID:27723717), (PMID:27723720) UniProt PMID:27723717 PMID:27723720 NCBI chr20:104,882,739...104,904,612 JBrowse link
G RPA2 replication protein A2 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr20:104,883,027...104,904,951 JBrowse link
G SCML2 Scm polycomb group protein like 2 acts_upstream_of_or_within ISO (PMID:25634095) MGI PMID:25634095 NCBI chr  X:16,680,560...16,803,443
Ensembl chr  X:16,680,567...16,782,447
JBrowse link
G SPO11 SPO11 initiator of meiotic double strand breaks involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20551173) Ensembl
MGI
PMID:20551173 GO_REF:0000107 NCBI chr 2:6,778,442...6,792,736
Ensembl chr 2:6,778,985...6,792,643
JBrowse link
G STAG3 STAG3 cohesin complex component involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24797475) Ensembl
MGI
PMID:24797475 GO_REF:0000107 NCBI chr28:12,853,456...12,893,098
Ensembl chr28:12,853,404...12,891,638
JBrowse link
G TEX15 testis expressed 15, meiosis and synapsis associated acts_upstream_of_or_within ISO (PMID:18283110) MGI PMID:18283110 NCBI chr 8:28,947,414...29,044,215
Ensembl chr 8:28,947,423...28,991,634
JBrowse link
G TTK TTK protein kinase acts_upstream_of_or_within ISO (PMID:21558374) MGI PMID:21558374 NCBI chr13:4,738,849...4,779,563
Ensembl chr13:4,738,959...4,780,627
JBrowse link
chromosome passenger complex localization to kinetochore term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RCC2 regulator of chromosome condensation 2 involved_in ISO (PMID:12919680) UniProt PMID:12919680 NCBI chr20:115,139,279...115,171,872 JBrowse link
establishment of protein localization to chromatin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTCFL CCCTC-binding factor like involved_in ISO (PMID:18765639) UniProt PMID:18765639 NCBI chr 2:6,592,924...6,623,787 JBrowse link
G H1-5 H1.5 linker histone, cluster member involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:44,663,976...44,664,753
Ensembl chr17:44,664,042...44,664,719
JBrowse link
G H2AFY core histone macro-H2A.1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:38,113,212...38,178,227
Ensembl chr23:38,113,195...38,168,382
JBrowse link
G H2AFY2 H2A histone family member Y2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:61,194,887...61,254,361
Ensembl chr 9:61,195,431...61,231,228
JBrowse link
G LOC103245755 WW domain-binding protein 2-like involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:40,120,432...40,122,225 JBrowse link
G LRWD1 leucine rich repeats and WD repeat domain containing 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr28:10,748,367...10,756,304
Ensembl chr28:10,744,614...10,756,303
JBrowse link
G NIPBL NIPBL cohesin loading factor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 4:35,748,112...35,940,075
Ensembl chr 4:35,829,386...35,941,271
JBrowse link
G RUVBL2 RuvB like AAA ATPase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:42,227,982...42,247,204
Ensembl chr 6:42,227,821...42,249,707
JBrowse link
G WBP2 WW domain binding protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:45,821,875...45,836,558
Ensembl chr16:45,821,967...45,835,530
JBrowse link
establishment of protein localization to telomere term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACD ACD shelterin complex subunit and telomerase recruitment factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:59,783,842...59,787,117
Ensembl chr 5:59,784,178...59,787,032
JBrowse link
G BRCA2 BRCA2 DNA repair associated involved_in ISO (PMID:21076401)
(MGI:5707585|PMID:21076401)
BHF-UCL PMID:21076401 MGI:5707585 NCBI chr 3:11,070,086...11,155,257
Ensembl chr 3:11,071,682...11,155,213
JBrowse link
G NABP2 nucleic acid binding protein 2 involved_in ISO (PMID:25589350) BHF-UCL PMID:25589350 NCBI chr11:52,176,021...52,183,204
Ensembl chr11:52,177,987...52,182,572
JBrowse link
G POT1 protection of telomeres 1 involved_in ISO (PMID:25589350) BHF-UCL PMID:25589350 NCBI chr21:93,572,139...93,688,374
Ensembl chr21:93,571,272...93,655,869
JBrowse link
G SPDYA speedy/RINGO cell cycle regulator family member A acts_upstream_of_or_within ISO (PMID:28031483) MGI PMID:28031483 NCBI chr14:78,756,606...78,792,788 JBrowse link
G TERT telomerase reverse transcriptase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:1,082,894...1,119,373
Ensembl chr 4:1,083,384...1,117,468
JBrowse link
G ZNF827 zinc finger protein 827 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:92,315,242...92,489,741
Ensembl chr 7:92,315,080...92,489,762
JBrowse link
mitotic cohesin loading term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NIPBL NIPBL cohesin loading factor involved_in IEA InterPro GO_REF:0000002 NCBI chr 4:35,748,112...35,940,075
Ensembl chr 4:35,829,386...35,941,271
JBrowse link
negative regulation of establishment of protein localization to telomere term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TERF1 telomeric repeat binding factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:68,608,830...68,647,220
Ensembl chr 8:68,608,844...68,648,171
JBrowse link
negative regulation of protein localization to chromatin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDK9 cyclin dependent kinase 9 involved_in ISO (PMID:14701750) UniProt PMID:14701750 NCBI chr12:10,342,240...10,346,792
Ensembl chr12:10,342,801...10,346,502
JBrowse link
G PIAS4 protein inhibitor of activated STAT 4 involved_in ISO (PMID:35013556) UniProt PMID:35013556 NCBI chr 6:3,768,100...3,797,377 JBrowse link
G RNF4 ring finger protein 4 involved_in ISO (PMID:35013556) UniProt PMID:35013556 NCBI chr27:46,245,786...46,290,671 JBrowse link
G SIRT6 sirtuin 6 involved_in ISO (PMID:27912097) UniProt PMID:27912097 NCBI chr 6:3,924,230...3,932,583
Ensembl chr 6:3,924,230...3,932,590
JBrowse link
G SPI1 Spi-1 proto-oncogene involved_in ISO (MGI:6381024|PMID:30911105) ARUK-UCL PMID:30911105 MGI:6381024 NCBI chr 1:17,935,037...17,961,638
Ensembl chr 1:17,935,922...17,961,717
JBrowse link
G VCP valosin containing protein involved_in ISO (PMID:35013556) UniProt PMID:35013556 NCBI chr12:45,545,139...45,560,702
Ensembl chr12:45,545,507...45,563,380
JBrowse link
negative regulation of protein localization to chromosome, telomeric region term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G H2AFY core histone macro-H2A.1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:38,113,212...38,178,227
Ensembl chr23:38,113,195...38,168,382
JBrowse link
positive regulation of establishment of protein localization to telomere term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCT2 chaperonin containing TCP1 subunit 2 involved_in ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr11:65,213,992...65,230,318
Ensembl chr11:65,214,060...65,230,379
JBrowse link
G CCT3 chaperonin containing TCP1 subunit 3 involved_in ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr20:7,518,729...7,545,296
Ensembl chr20:7,518,846...7,545,677
JBrowse link
G CCT4 chaperonin containing TCP1 subunit 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:45,086,932...45,106,922
Ensembl chr14:45,086,920...45,111,271
JBrowse link
G CCT5 chaperonin containing TCP1 subunit 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:9,787,093...9,802,892
Ensembl chr 4:9,787,101...9,805,852
JBrowse link
G CCT6A chaperonin containing TCP1 subunit 6A involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:2,715,990...2,728,397
Ensembl chr21:2,718,975...2,728,239
JBrowse link
G CCT7 chaperonin containing TCP1 subunit 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:33,921,100...33,940,204
Ensembl chr14:33,921,247...33,939,404
JBrowse link
G CCT8 chaperonin containing TCP1 subunit 8 involved_in ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr 2:63,151,783...63,169,249
Ensembl chr 2:63,151,481...63,169,098
JBrowse link
G DKC1 dyskerin pseudouridine synthase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:129,015,883...129,029,741
Ensembl chr  X:129,016,046...129,030,001
JBrowse link
G LOC103229199 T-complex protein 1 subunit eta-like involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:43,630,762...43,632,379 JBrowse link
G TCP1 t-complex 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:87,377,452...87,388,692
Ensembl chr13:87,377,996...87,388,568
JBrowse link
G WRAP53 WD repeat containing antisense to TP53 involved_in ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chr16:7,065,531...7,085,590
Ensembl chr16:7,066,333...7,085,625
JBrowse link
positive regulation of protein localization to chromatin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDK9 cyclin dependent kinase 9 involved_in ISO (PMID:29335245) UniProt PMID:29335245 NCBI chr12:10,342,240...10,346,792
Ensembl chr12:10,342,801...10,346,502
JBrowse link
G SIRT6 sirtuin 6 involved_in ISO (MGI:6357632|PMID:31399344)
(PMID:31399344)
UniProt PMID:31399344 MGI:6357632 NCBI chr 6:3,924,230...3,932,583
Ensembl chr 6:3,924,230...3,932,590
JBrowse link
G VRK1 VRK serine/threonine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:74,686,102...74,770,496
Ensembl chr24:74,686,111...74,770,874
JBrowse link
positive regulation of protein localization to chromosome, telomeric region term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GNL3 G protein nucleolar 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:14,059,191...14,068,388
Ensembl chr22:14,059,204...14,068,155
JBrowse link
G GNL3L G protein nucleolar 3 like involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:50,650,512...50,684,835
Ensembl chr  X:50,666,794...50,684,649
JBrowse link
G PML PML nuclear body scaffold involved_in ISO (PMID:22641345) BHF-UCL PMID:22641345 NCBI chr26:9,441,998...9,494,949
Ensembl chr26:9,451,112...9,494,931
JBrowse link
positive regulation of protein localization to kinetochore term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CENPQ centromere protein Q involved_in ISO (PMID:25395579) UniProt PMID:25395579 NCBI chr17:22,898,962...22,922,234
Ensembl chr17:22,900,089...22,915,378
JBrowse link
G TRAPPC12 trafficking protein particle complex subunit 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:104,191,735...104,315,340
Ensembl chr14:104,191,842...104,306,587
JBrowse link
protein localization to chromatin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APLF aprataxin and PNKP like factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:38,539,398...38,636,666
Ensembl chr14:38,540,084...38,636,569
JBrowse link
G BRD2 bromodomain containing 2 involved_in ISO (PMID:28262505)
(MGI:6106706|PMID:28262505)
UniProt PMID:28262505 MGI:6106706 NCBI chr17:39,113,519...39,126,267 JBrowse link
G BRD2 bromodomain containing 2 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr17:39,114,700...39,122,051 JBrowse link
G BRD3 bromodomain containing 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:4,075,123...4,112,727
Ensembl chr12:4,089,621...4,109,441
JBrowse link
G CARM1 coactivator associated arginine methyltransferase 1 acts_upstream_of_or_within ISO (PMID:15616592) MGI PMID:15616592 NCBI chr 6:9,866,715...9,915,655
Ensembl chr 6:9,866,534...9,914,682
JBrowse link
G CHMP7 charged multivesicular body protein 7 involved_in ISO (PMID:28242692) ARUK-UCL PMID:28242692 NCBI chr 8:21,370,334...21,390,036
Ensembl chr 8:21,373,968...21,387,698
JBrowse link
G DAXX death domain associated protein involved_in ISO (MGI:5882889|PMID:17081986) CAFA PMID:17081986 MGI:5882889 NCBI chr17:38,754,227...38,758,714
Ensembl chr17:38,754,280...38,759,071
JBrowse link
G ESCO2 establishment of sister chromatid cohesion N-acetyltransferase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22101327) Ensembl
MGI
PMID:22101327 GO_REF:0000107 NCBI chr 8:25,885,823...25,919,863
Ensembl chr 8:25,887,309...25,916,630
JBrowse link
G ESR1 estrogen receptor 1 involved_in ISO (PMID:20388878) BHF-UCL PMID:20388878 NCBI chr13:79,153,418...79,554,552
Ensembl chr13:79,270,265...79,554,549
JBrowse link
G EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18311137) Ensembl
MGI
PMID:18311137 GO_REF:0000107 NCBI chr21:117,380,518...117,515,224
Ensembl chr21:117,380,361...117,421,573
JBrowse link
G FAM47E family with sequence similarity 47 member E involved_in ISO (PMID:33376131) UniProt PMID:33376131 NCBI chr 7:24,750,287...24,782,574 JBrowse link
G FAM47E family with sequence similarity 47 member E involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 Ensembl chr 7:24,755,448...24,782,779 JBrowse link
G LEF1 lymphoid enhancer binding factor 1 involved_in ISO (PMID:20363964) UniProt PMID:20363964 NCBI chr 7:55,974,770...56,096,214
Ensembl chr 7:55,990,621...56,094,110
JBrowse link
G LEMD2 LEM domain nuclear envelope protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:38,291,100...38,309,134
Ensembl chr17:38,291,217...38,307,745
JBrowse link
G MCM8 minichromosome maintenance 8 homologous recombination repair factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:32,137,983...32,181,187
Ensembl chr 2:32,138,173...32,181,179
JBrowse link
G MCM9 minichromosome maintenance 9 homologous recombination repair factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:54,945,668...55,069,869
Ensembl chr13:54,945,786...55,070,328
JBrowse link
G MMS22L MMS22 like, DNA repair protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:76,611,574...76,750,893
Ensembl chr13:76,611,517...76,750,616
JBrowse link
G MRNIP MRN complex interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:81,571,083...81,590,906
Ensembl chr23:81,571,199...81,590,815
JBrowse link
G MSH2 mutS homolog 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:59,730,101...59,802,857
Ensembl chr14:59,729,789...59,802,819
JBrowse link
G PARP1 poly(ADP-ribose) polymerase 1 involved_in ISO (PMID:34874266) UniProt PMID:34874266 NCBI chr25:3,350,798...3,405,040 JBrowse link
G PARP1 poly(ADP-ribose) polymerase 1 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr25:3,350,821...3,388,826 JBrowse link
G PLK1 polo like kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:21,388,957...21,408,574
Ensembl chr 5:21,396,204...21,410,718
JBrowse link
G RAD21 RAD21 cohesin complex component involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:111,486,356...111,515,641
Ensembl chr 8:111,486,048...111,507,729
JBrowse link
G TONSL tonsoku like, DNA repair protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:138,641,514...138,657,429
Ensembl chr 8:138,641,575...138,656,673
JBrowse link
G WAPL WAPL cohesin release factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:45,335,423...45,420,785
Ensembl chr 9:45,334,981...45,420,787
JBrowse link
G ZMYND8 zinc finger MYND-type containing 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:16,547,144...16,696,729
Ensembl chr 2:16,622,702...16,696,878
JBrowse link
protein localization to chromosome, centromeric region term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BOD1 biorientation of chromosomes in cell division 1 involved_in ISO (PMID:17938248), (PMID:24157919) UniProt PMID:17938248 PMID:24157919 NCBI chr23:75,761,476...75,771,205 JBrowse link
G BUB1B BUB1 mitotic checkpoint serine/threonine kinase B acts_upstream_of_or_within ISO (PMID:19283064) MGI PMID:19283064 NCBI chr26:42,769,955...42,855,353
Ensembl chr26:42,792,830...42,855,306
JBrowse link
G CENPA centromere protein A involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22516971) Ensembl
MGI
PMID:22516971 GO_REF:0000107 NCBI chr14:80,838,049...80,847,609
Ensembl chr14:80,839,335...80,846,608
JBrowse link
G CTCF CCCTC-binding factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:59,806,753...59,889,534
Ensembl chr 5:59,806,551...59,880,049
JBrowse link
G HASPIN histone H3 associated protein kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:3,226,292...3,229,349
Ensembl chr16:3,226,582...3,228,978
JBrowse link
G MIS18A MIS18 kinetochore protein A acts_upstream_of_or_within ISO (PMID:22516971) MGI PMID:22516971 NCBI chr 2:59,853,059...59,865,442
Ensembl chr 2:59,854,963...59,865,434
JBrowse link
G RB1 RB transcriptional corepressor 1 involved_in ISO (PMID:20551165) BHF-UCL PMID:20551165 NCBI chr 3:26,220,783...26,393,671
Ensembl chr 3:26,220,803...26,394,546
JBrowse link
G SMC5 structural maintenance of chromosomes 5 acts_upstream_of_or_within ISO (PMID:26919979) MGI PMID:26919979 NCBI chr12:81,317,689...81,426,196 JBrowse link
protein localization to chromosome, telomeric region term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACD ACD shelterin complex subunit and telomerase recruitment factor involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 5:59,783,842...59,787,117
Ensembl chr 5:59,784,178...59,787,032
JBrowse link
G ATR ATR serine/threonine kinase involved_in ISO (PMID:21829167) BHF-UCL PMID:21829167 NCBI chr15:48,048,785...48,173,120
Ensembl chr15:48,048,882...48,173,137
JBrowse link
G ATRX ATRX chromatin remodeler involved_in ISO (MGI:4454526|PMID:20110566) BHF-UCL PMID:20110566 MGI:4454526 NCBI chr  X:66,449,830...66,737,220
Ensembl chr  X:66,448,449...66,737,164
JBrowse link
G PINX1 PIN2 (TERF1) interacting telomerase inhibitor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:8,259,537...8,336,586
Ensembl chr 8:8,259,692...8,336,603
JBrowse link
G TERF2 telomeric repeat binding factor 2 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 5:58,019,422...58,051,819
Ensembl chr 5:58,019,468...58,050,802
JBrowse link
G TERF2IP TERF2 interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:61,133,028...61,142,713
Ensembl chr 5:61,133,173...61,141,896
JBrowse link
G TINF2 TERF1 interacting nuclear factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:1,222,617...1,225,981
Ensembl chr24:1,222,999...1,225,716
JBrowse link
G TNKS tankyrase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:9,300,234...9,524,350
Ensembl chr 8:9,305,872...9,524,104
JBrowse link
G TNKS2 tankyrase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:85,074,228...85,140,761
Ensembl chr 9:85,074,667...85,143,054
JBrowse link
G TPP1 tripeptidyl peptidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:58,205,999...58,211,743
Ensembl chr 1:58,206,072...58,210,945
JBrowse link
protein localization to heterochromatin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC103224842 periphilin-1-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:82,584,913...82,586,059 JBrowse link
G PPHLN1 periphilin 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:38,563,818...38,684,210
Ensembl chr11:38,563,866...38,684,030
JBrowse link
G TASOR transcription activation suppressor involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr22:17,957,264...18,020,887
Ensembl chr22:17,960,845...18,020,653
JBrowse link
protein localization to kinetochore term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AURKB aurora kinase B involved_in ISO (PMID:19468067) UniProt PMID:19468067 NCBI chr16:7,571,255...7,583,034
Ensembl chr16:7,570,538...7,582,959
JBrowse link
G BUB3 BUB3 mitotic checkpoint protein involved_in ISO (PMID:9660858) UniProt PMID:9660858 NCBI chr 9:115,825,796...115,837,432
Ensembl chr 9:115,825,664...115,838,428
JBrowse link
G CDK1 cyclin dependent kinase 1 involved_in ISO (PMID:18195732)
(PMID:28479321)
BHF-UCL
UniProt
PMID:18195732 PMID:28479321 NCBI chr 9:70,475,736...70,492,947 JBrowse link
G CHAMP1 chromosome alignment maintaining phosphoprotein 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 3:92,104,268...92,119,018
Ensembl chr 3:92,115,535...92,117,976
JBrowse link
G IK IK cytokine involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:43,280,876...43,295,844
Ensembl chr23:43,280,981...43,297,843
JBrowse link
G KNL1 kinetochore scaffold 1 acts_upstream_of_or_within ISO (PMID:22331848) MGI PMID:22331848 NCBI chr26:42,342,741...42,409,466 JBrowse link
G KNL1 kinetochore scaffold 1 involved_in IEA Ensembl
TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 Ensembl chr26:42,365,134...42,389,355 JBrowse link
G MTBP MDM2 binding protein acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:21274008) MGI
TreeGrafter
Ensembl
PMID:21274008 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:115,023,272...115,109,948
Ensembl chr 8:115,029,029...115,102,088
JBrowse link
G SPDL1 spindle apparatus coiled-coil protein 1 involved_in IEA UniProt
TreeGrafter
InterPro
Ensembl
GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr23:71,795,470...71,816,468
Ensembl chr23:71,795,563...71,816,452
JBrowse link
G TTK TTK protein kinase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21558374) TreeGrafter
MGI
PMID:21558374 GO_REF:0000118 NCBI chr13:4,738,849...4,779,563
Ensembl chr13:4,738,959...4,780,627
JBrowse link
G ZW10 zw10 kinetochore protein involved_in ISO (PMID:19468067) UniProt PMID:19468067 NCBI chr 1:105,108,531...105,152,921
Ensembl chr 1:105,109,040...105,152,862
JBrowse link
G ZWILCH zwilch kinetochore protein involved_in IEA Ensembl
TreeGrafter
UniProt
GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr26:17,000,373...17,045,980
Ensembl chr26:17,000,148...17,045,804
JBrowse link
protein localization to kinetochore involved in kinetochore assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KNTC1 kinetochore associated 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:117,866,814...117,966,297
Ensembl chr11:117,869,711...117,963,907
JBrowse link
protein localization to pericentric heterochromatin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G JARID2 jumonji and AT-rich interaction domain containing 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:27892467) Ensembl
MGI
PMID:27892467 GO_REF:0000107 NCBI chr17:56,651,752...56,928,650
Ensembl chr17:56,651,596...56,928,126
JBrowse link
protein localization to site of double-strand break term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BRME1 break repair meiotic recombinase recruitment factor 1 involved_in ISO (PMID:32345962), (PMID:32460033), (PMID:32463460) MGI PMID:32345962 PMID:32460033 PMID:32463460 NCBI chr 6:12,543,242...12,567,863
Ensembl chr 6:12,543,141...12,556,423
JBrowse link
G FAM178B family with sequence similarity 178 member B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:1,204,642...1,303,606
Ensembl chr14:1,203,885...1,317,560
JBrowse link
G H2AFX histone H2AX involved_in ISO (PMID:12419185), (PMID:30952868) UniProt PMID:12419185 PMID:30952868 NCBI chr 1:110,466,692...110,468,776
Ensembl chr 1:110,467,775...110,468,206
JBrowse link
G HTATSF1 HIV-1 Tat specific factor 1 involved_in ISO (PMID:35597237) UniProt PMID:35597237 NCBI chr  X:111,498,102...111,513,959
Ensembl chr  X:111,498,634...111,514,749
JBrowse link
G IFFO1 intermediate filament family orphan 1 involved_in ISO (PMID:31548606) UniProt PMID:31548606 NCBI chr11:6,573,998...6,589,493
Ensembl chr11:6,573,684...6,589,570
JBrowse link
G MDC1 mediator of DNA damage checkpoint 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:41,735,584...41,754,618
Ensembl chr17:41,739,419...41,755,141
JBrowse link
G NBN nibrin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:85,017,807...85,069,219
Ensembl chr 8:85,015,752...85,069,028
JBrowse link
G PARP3 poly(ADP-ribose) polymerase family member 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:21211721) MGI
Ensembl
PMID:21211721 GO_REF:0000107 NCBI chr22:13,310,885...13,316,807
Ensembl chr22:13,310,938...13,320,680
JBrowse link
G RAD17 RAD17 checkpoint clamp loader component involved_in ISO (PMID:24534091) UniProt PMID:24534091 NCBI chr 4:65,456,174...65,501,665
Ensembl chr 4:65,457,763...65,501,157
JBrowse link
G RHNO1 RAD9-HUS1-RAD1 interacting nuclear orphan 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:2,941,055...2,955,421
Ensembl chr11:2,941,001...2,955,438
JBrowse link
G RPA1 replication protein A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:1,470,375...1,537,603
Ensembl chr16:1,470,474...1,539,246
JBrowse link
G SIRT6 sirtuin 6 involved_in ISO (PMID:27568560) UniProt PMID:27568560 NCBI chr 6:3,924,230...3,932,583
Ensembl chr 6:3,924,230...3,932,590
JBrowse link
G SLF1 SMC5-SMC6 complex localization factor 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 4:88,497,787...88,573,966
Ensembl chr 4:88,499,373...88,576,983
JBrowse link
G SLF2 SMC5-SMC6 complex localization factor 2 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 9:93,919,373...93,983,499
Ensembl chr 9:93,931,456...93,980,297
JBrowse link
G TOPBP1 DNA topoisomerase II binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:56,679,333...56,740,773
Ensembl chr15:56,679,426...56,741,566
JBrowse link
G TP53BP1 tumor protein p53 binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:39,489,925...39,595,096
Ensembl chr26:39,508,600...39,594,927
JBrowse link
G XRCC4 X-ray repair cross complementing 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:77,182,569...77,468,786
Ensembl chr 4:77,182,793...77,468,775
JBrowse link
regulation of cohesin loading term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WAPL WAPL cohesin release factor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:45,335,423...45,420,785
Ensembl chr 9:45,334,981...45,420,787
JBrowse link
regulation of establishment of protein localization to chromosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SPIDR scaffold protein involved in DNA repair involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:43,380,207...43,872,077
Ensembl chr 8:43,380,244...43,872,937
JBrowse link
regulation of protein localization to chromatin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SETD2 SET domain containing 2, histone lysine methyltransferase involved_in ISO (PMID:24843002) UniProt PMID:24843002 NCBI chr22:8,421,178...8,567,221
Ensembl chr22:8,420,960...8,567,201
JBrowse link
G VCP valosin containing protein involved_in ISO (PMID:32152270) UniProt PMID:32152270 NCBI chr12:45,545,139...45,560,702
Ensembl chr12:45,545,507...45,563,380
JBrowse link
G VCPIP1 valosin containing protein interacting protein 1 involved_in ISO (PMID:32649882) UniProt PMID:32649882 NCBI chr 8:62,506,541...62,546,238
Ensembl chr 8:62,510,808...62,546,229
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16916
    localization 5377
      macromolecule localization 3007
        cellular macromolecule localization 2567
          protein localization 2555
            protein localization to organelle 1044
              protein localization to chromosome 126
                establishment of protein localization to chromosome + 29
                protein localization to chromatin + 48
                protein localization to chromosome, centromeric region + 25
                protein localization to chromosome, telomeric region + 32
                protein localization to condensed chromosome + 16
                protein localization to nucleolar rDNA repeats 0
                protein localization to site of double-strand break 17
paths to the root