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ONTOLOGY REPORT - ANNOTATIONS


Term:nucleobase-containing small molecule biosynthetic process
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Accession:GO:0034404 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of a nucleobase-containing small molecule: a nucleobase, a nucleoside, or a nucleotide.
Synonyms:exact_synonym: nucleobase, nucleoside and nucleotide anabolism;   nucleobase, nucleoside and nucleotide biosynthesis;   nucleobase, nucleoside and nucleotide formation;   nucleobase, nucleoside and nucleotide synthesis


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acetyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAT1 acetyl-CoA acetyltransferase 1 IEA Ensembl GO_REF:0000107 NCBI chr 9:36,525,266...36,545,634
Ensembl chr 9:36,525,261...36,545,633
JBrowse link
G NUDT7 nudix hydrolase 7 IEA Ensembl GO_REF:0000107 NCBI chr 6:10,161,959...10,174,006
Ensembl chr 6:10,158,688...10,173,980
JBrowse link
adenosine 5'-(hexahydrogen pentaphosphate) catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100515984 diphosphoinositol polyphosphate phosphohydrolase 3-beta IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:44,773,570...44,779,568 JBrowse link
G NUDT11 nudix hydrolase 11 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:44,912,160...44,918,977 JBrowse link
G NUDT3 nudix hydrolase 3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:30,343,253...30,422,019
Ensembl chr 7:30,320,307...30,443,535
JBrowse link
G NUDT4 nudix hydrolase 4 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:89,714,012...89,728,260 JBrowse link
adenosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NT5E 5'-nucleotidase ecto IEA Ensembl GO_REF:0000107 NCBI chr 1:54,400,786...54,450,743
Ensembl chr 1:54,400,810...54,448,742
JBrowse link
ADP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT9 nudix hydrolase 9 ISO (MGI:MGI:2158549|PMID:11825615) MGI PMID:11825615 MGI:MGI:2158549 NCBI chr 8:131,436,245...131,472,984 JBrowse link
AMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NT5E 5'-nucleotidase ecto IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:54,400,786...54,450,743
Ensembl chr 1:54,400,810...54,448,742
JBrowse link
butyryl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT7 nudix hydrolase 7 ISO (MGI:MGI:6450264|PMID:18799520) UniProt PMID:18799520 MGI:MGI:6450264 NCBI chr 6:10,161,959...10,174,006
Ensembl chr 6:10,158,688...10,173,980
JBrowse link
cAMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDE4A phosphodiesterase 4A IEA UniProt GO_REF:0000041 NCBI chr 2:69,225,403...69,268,327
Ensembl chr 2:69,225,395...69,267,971
JBrowse link
G PDE4B phosphodiesterase 4B IEA UniProt GO_REF:0000041 NCBI chr 6:146,167,262...146,720,105
Ensembl chr 6:146,166,681...146,720,127
JBrowse link
G PDE4C phosphodiesterase 4C IEA UniProt GO_REF:0000041 NCBI chr 2:59,567,644...59,598,398 JBrowse link
G PDE4D phosphodiesterase 4D IBA
IEA
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000041 NCBI chr16:37,897,300...39,406,534
Ensembl chr16:37,897,300...39,154,586
JBrowse link
G PDE8A phosphodiesterase 8A IEA UniProt GO_REF:0000041 NCBI chr 7:52,410,766...52,558,482
Ensembl chr 7:52,410,779...52,556,884
JBrowse link
G PDE8B phosphodiesterase 8B IEA UniProt GO_REF:0000041 NCBI chr 2:86,007,190...86,323,796 JBrowse link
cGMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDE1A phosphodiesterase 1A ISO RGD PMID:16514069 RGD:2312521 NCBI chr15:87,619,049...87,965,068
Ensembl chr15:87,440,916...87,964,202
JBrowse link
G PDE2A phosphodiesterase 2A ISS
IBA
IEA
(PMID:21873635) UniProt
GO_Central
Ensembl
PMID:21873635 GO_REF:0000024, GO_REF:0000107 NCBI chr 9:7,136,637...7,227,966
Ensembl chr 9:7,136,644...7,227,964
JBrowse link
G PDE5A phosphodiesterase 5A IEA Ensembl GO_REF:0000107 NCBI chr 8:104,270,858...104,420,955
Ensembl chr 8:104,270,881...104,420,947
JBrowse link
G PDE9A phosphodiesterase 9A IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr13:205,938,342...206,034,981
Ensembl chr13:205,938,334...206,034,981
JBrowse link
coenzyme A catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT7 nudix hydrolase 7 IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 6:10,161,959...10,174,006
Ensembl chr 6:10,158,688...10,173,980
JBrowse link
cyclic nucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNP 2',3'-cyclic nucleotide 3' phosphodiesterase IEA UniProt GO_REF:0000104 NCBI chr12:20,758,081...20,765,655
Ensembl chr12:20,758,081...20,776,868
JBrowse link
dADP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT18 nudix hydrolase 18 IEA Ensembl GO_REF:0000107 NCBI chr14:6,378,987...6,381,712
Ensembl chr14:6,377,815...6,381,596
JBrowse link
dATP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase IEA Ensembl GO_REF:0000107 NCBI chr17:47,044,492...47,072,232
Ensembl chr17:47,044,495...47,072,245
JBrowse link
G NUDT1 nudix hydrolase 1 ISO (PMID:10373420) UniProtKB PMID:10373420 NCBI chr 3:1,567,417...1,575,801
Ensembl chr 3:1,567,114...1,576,235
JBrowse link
G SAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 IEA Ensembl GO_REF:0000107 NCBI chr17:40,117,348...40,171,935
Ensembl chr17:40,112,978...40,171,895
JBrowse link
dCTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCTPP1 dCTP pyrophosphatase 1 IEA UniProt GO_REF:0000104 NCBI chr 3:17,896,426...17,900,562
Ensembl chr 3:17,886,895...17,900,563
JBrowse link
deoxyribonucleoside monophosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNPH1 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:38,263,819...38,267,361
Ensembl chr 7:38,263,820...38,266,695
JBrowse link
deoxyribonucleoside triphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ITPA inosine triphosphatase IEA UniProt GO_REF:0000104 NCBI chr17:32,458,351...32,474,827
Ensembl chr17:32,455,459...32,474,786
JBrowse link
deoxyribonucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DERA deoxyribose-phosphate aldolase IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 5:56,590,982...56,706,479
Ensembl chr 5:56,590,978...56,706,458
JBrowse link
G NT5C 5', 3'-nucleotidase, cytosolic ISO (MGI:MGI:1353788|PMID:10681516) MGI PMID:10681516 MGI:MGI:1353788 NCBI chr12:6,162,420...6,164,143
Ensembl chr12:6,139,439...6,164,142
JBrowse link
G SAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 ISO (PMID:23601106), (PMID:26294762) UniProtKB PMID:23601106, PMID:26294762 NCBI chr17:40,117,348...40,171,935
Ensembl chr17:40,112,978...40,171,895
JBrowse link
dGDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT18 nudix hydrolase 18 IEA Ensembl GO_REF:0000107 NCBI chr14:6,378,987...6,381,712
Ensembl chr14:6,377,815...6,381,596
JBrowse link
dGTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT1 nudix hydrolase 1 ISO (MGI:MGI:77076|PMID:7592783)
(PMID:10373420), (PMID:22556419)
MGI
UniProtKB
PMID:7592783, PMID:10373420, PMID:22556419 MGI:MGI:77076 NCBI chr 3:1,567,417...1,575,801
Ensembl chr 3:1,567,114...1,576,235
JBrowse link
G NUDT15 nudix hydrolase 15 IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr11:19,572,963...19,584,565
Ensembl chr11:19,572,644...19,584,538
JBrowse link
G SAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:40,117,348...40,171,935
Ensembl chr17:40,112,978...40,171,895
JBrowse link
diadenosine hexaphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100515984 diphosphoinositol polyphosphate phosphohydrolase 3-beta IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:44,773,570...44,779,568 JBrowse link
G NUDT11 nudix hydrolase 11 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:44,912,160...44,918,977 JBrowse link
G NUDT3 nudix hydrolase 3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:30,343,253...30,422,019
Ensembl chr 7:30,320,307...30,443,535
JBrowse link
G NUDT4 nudix hydrolase 4 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:89,714,012...89,728,260 JBrowse link
diadenosine pentaphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100515984 diphosphoinositol polyphosphate phosphohydrolase 3-beta IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:44,773,570...44,779,568 JBrowse link
G NUDT11 nudix hydrolase 11 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:44,912,160...44,918,977 JBrowse link
G NUDT3 nudix hydrolase 3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:30,343,253...30,422,019
Ensembl chr 7:30,320,307...30,443,535
JBrowse link
G NUDT4 nudix hydrolase 4 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:89,714,012...89,728,260 JBrowse link
diadenosine triphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FHIT fragile histidine triad diadenosine triphosphatase IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:41,443,963...42,884,799
Ensembl chr13:41,443,965...42,228,680
JBrowse link
dITP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT16 nudix hydrolase 16 ISO (MGI:MGI:5009783|PMID:20081199) MGI PMID:20081199 MGI:MGI:5009783 NCBI chr13:1,125,180...1,128,036
Ensembl chr13:1,122,541...1,128,041
JBrowse link
dTTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCTPP1 dCTP pyrophosphatase 1 NOT ISO (PMID:24467396) UniProtKB PMID:24467396 NCBI chr 3:17,896,426...17,900,562
Ensembl chr 3:17,886,895...17,900,563
JBrowse link
dUMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NT5M 5',3'-nucleotidase, mitochondrial IEA Ensembl GO_REF:0000107 NCBI chr12:60,979,496...60,994,577
Ensembl chr12:60,979,499...60,994,582
JBrowse link
dUTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DUT deoxyuridine triphosphatase IBA
IEA
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000104 NCBI chr 1:123,451,207...123,462,267
Ensembl chr 1:123,451,212...123,462,232
JBrowse link
flavin adenine dinucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G VCP valosin containing protein IEA Ensembl GO_REF:0000107 NCBI chr 1:235,854,532...235,869,712
Ensembl chr 1:235,796,446...235,876,321
JBrowse link
GDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GUK1 guanylate kinase 1 ISO RGD PMID:4307347 RGD:5147877 NCBI chr 2:51,247,665...51,257,481
Ensembl chr 2:51,241,952...51,257,485
JBrowse link
GDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT18 nudix hydrolase 18 IEA Ensembl GO_REF:0000107 NCBI chr14:6,378,987...6,381,712
Ensembl chr14:6,377,815...6,381,596
JBrowse link
GMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GMPS guanine monophosphate synthase IBA
IEA
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000041 NCBI chr13:95,742,342...95,820,903
Ensembl chr13:95,742,383...95,819,762
JBrowse link
G IMPDH1 inosine monophosphate dehydrogenase 1 IEA UniProt GO_REF:0000104 NCBI chr18:19,979,983...19,996,432
Ensembl chr18:19,979,955...19,996,429
JBrowse link
G IMPDH2 inosine monophosphate dehydrogenase 2 IEA UniProt GO_REF:0000104 NCBI chr13:31,658,642...31,663,660
Ensembl chr13:31,658,642...31,714,455
JBrowse link
G QRICH1 glutamine rich 1 IEA UniProt GO_REF:0000104 NCBI chr13:31,663,812...31,714,523
Ensembl chr13:31,658,642...31,714,455
JBrowse link
GMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HPRT1 hypoxanthine phosphoribosyltransferase 1 ISS
IEA
UniProt
Ensembl
GO_REF:0000024, GO_REF:0000107 NCBI chr  X:110,321,144...110,357,902
Ensembl chr  X:110,321,208...110,357,899
JBrowse link
G PRTFDC1 phosphoribosyl transferase domain containing 1 NOT ISO (PMID:21054786) UniProtKB PMID:21054786 NCBI chr10:50,365,654...50,458,487
Ensembl chr10:50,365,786...50,463,271
JBrowse link
GMP salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HPRT1 hypoxanthine phosphoribosyltransferase 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:110,321,144...110,357,902
Ensembl chr  X:110,321,208...110,357,899
JBrowse link
GTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IMPDH1 inosine monophosphate dehydrogenase 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr18:19,979,983...19,996,432
Ensembl chr18:19,979,955...19,996,429
JBrowse link
G IMPDH2 inosine monophosphate dehydrogenase 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:31,658,642...31,663,660
Ensembl chr13:31,658,642...31,714,455
JBrowse link
G NME1 NME/NM23 nucleoside diphosphate kinase 1 IEA InterPro GO_REF:0000002 NCBI chr12:27,416,308...27,435,044
Ensembl chr12:27,416,337...27,436,160
JBrowse link
G NME2 NME/NM23 nucleoside diphosphate kinase 2 IEA InterPro GO_REF:0000002 NCBI chr12:27,439,529...27,445,025
Ensembl chr12:27,439,260...27,445,026
JBrowse link
G NME3 NME/NM23 nucleoside diphosphate kinase 3 IEA InterPro GO_REF:0000002 NCBI chr 3:40,195,456...40,197,121
Ensembl chr 3:40,195,616...40,196,858
JBrowse link
G NME4 NME/NM23 nucleoside diphosphate kinase 4 IEA InterPro GO_REF:0000002 NCBI chr 3:41,306,167...41,321,002
Ensembl chr 3:41,306,175...41,310,312
JBrowse link
G NME5 NME/NM23 family member 5 IEA InterPro GO_REF:0000002 NCBI chr 2:140,132,871...140,168,655
Ensembl chr 2:140,128,514...140,167,893
JBrowse link
G NME6 NME/NM23 nucleoside diphosphate kinase 6 IEA InterPro GO_REF:0000002 NCBI chr13:31,048,367...31,053,285
Ensembl chr13:31,046,906...31,053,130
JBrowse link
G NME7 NME/NM23 family member 7 IEA UniProt GO_REF:0000104 NCBI chr 4:81,639,907...81,912,276
Ensembl chr 4:81,639,909...81,911,743
JBrowse link
G NME9 NME/NM23 family member 9 IEA InterPro GO_REF:0000002 NCBI chr13:79,083,604...79,114,959
Ensembl chr13:79,089,189...79,114,506
JBrowse link
IDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT16 nudix hydrolase 16 IEA Ensembl GO_REF:0000107 NCBI chr13:1,125,180...1,128,036
Ensembl chr13:1,122,541...1,128,041
JBrowse link
G NUDT9 nudix hydrolase 9 ISO (MGI:MGI:2158549|PMID:11825615) MGI PMID:11825615 MGI:MGI:2158549 NCBI chr 8:131,436,245...131,472,984 JBrowse link
inosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr17:47,044,492...47,072,232
Ensembl chr17:47,044,495...47,072,245
JBrowse link
G ADA2 adenosine deaminase 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:69,526,413...69,554,640
Ensembl chr 5:69,526,434...69,554,661
JBrowse link
G ADAL adenosine deaminase like IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:128,089,422...128,125,691
Ensembl chr 1:128,089,500...128,125,967
JBrowse link
G AK1 adenylate kinase 1 ISO RGD PMID:19049516 RGD:5134369 NCBI chr 1:268,355,032...268,365,659
Ensembl chr 1:268,355,032...268,365,598
JBrowse link
ITP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ITPA inosine triphosphatase IEA Ensembl GO_REF:0000107 NCBI chr17:32,458,351...32,474,827
Ensembl chr17:32,455,459...32,474,786
JBrowse link
long-chain fatty-acyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACOT7 acyl-CoA thioesterase 7 IEA Ensembl GO_REF:0000107 NCBI chr 6:67,152,428...67,254,097
Ensembl chr 6:67,152,428...67,254,103
JBrowse link
malonyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MLYCD malonyl-CoA decarboxylase IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:4,683,386...4,698,698
Ensembl chr 6:4,681,664...4,698,661
JBrowse link
medium-chain fatty-acyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACOT7 acyl-CoA thioesterase 7 IEA Ensembl GO_REF:0000107 NCBI chr 6:67,152,428...67,254,097
Ensembl chr 6:67,152,428...67,254,103
JBrowse link
G NUDT7 nudix hydrolase 7 ISO (MGI:MGI:6450264|PMID:18799520) UniProt PMID:18799520 MGI:MGI:6450264 NCBI chr 6:10,161,959...10,174,006
Ensembl chr 6:10,158,688...10,173,980
JBrowse link
NAD catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT12 nudix hydrolase 12 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:109,044,946...109,059,721
Ensembl chr 2:109,044,948...109,059,624
JBrowse link
G NUDT17 nudix hydrolase 17 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:99,472,347...99,477,953
Ensembl chr 4:99,472,350...99,477,932
JBrowse link
G SARM1 sterile alpha and TIR motif containing 1 IEA
ISS
Ensembl
UniProt
GO_REF:0000024, GO_REF:0000107 NCBI chr12:44,654,364...44,676,942
Ensembl chr12:44,655,811...44,676,945
JBrowse link
NADP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT12 nudix hydrolase 12 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:109,044,946...109,059,721
Ensembl chr 2:109,044,948...109,059,624
JBrowse link
G NUDT13 nudix hydrolase 13 IEA Ensembl GO_REF:0000107 NCBI chr14:75,918,056...75,958,187
Ensembl chr14:75,918,171...75,958,183
JBrowse link
G NUDT17 nudix hydrolase 17 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:99,472,347...99,477,953
Ensembl chr 4:99,472,350...99,477,932
JBrowse link
nucleoside diphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENTPD3 ectonucleoside triphosphate diphosphohydrolase 3 IEA Ensembl GO_REF:0000107 NCBI chr13:24,623,579...24,659,642
Ensembl chr13:24,624,417...24,659,639
JBrowse link
nucleoside phosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT15 nudix hydrolase 15 ISO (PMID:26878724)
(PMID:26238318)
UniProtKB PMID:26238318, PMID:26878724 NCBI chr11:19,572,963...19,584,565
Ensembl chr11:19,572,644...19,584,538
JBrowse link
nucleoside triphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCTPP1 dCTP pyrophosphatase 1 ISO (MGI:MGI:3844778|PMID:19220460)
(PMID:24467396)
UniProtKB PMID:19220460, PMID:24467396 MGI:MGI:3844778 NCBI chr 3:17,896,426...17,900,562
Ensembl chr 3:17,886,895...17,900,563
JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr 1:31,724,290...31,796,594
Ensembl chr 1:31,722,721...31,796,595
JBrowse link
G ENPP3 ectonucleotide pyrophosphatase/phosphodiesterase 3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:31,859,180...31,932,617
Ensembl chr 1:31,859,951...31,959,879
JBrowse link
G ENTPD3 ectonucleoside triphosphate diphosphohydrolase 3 IEA Ensembl GO_REF:0000107 NCBI chr13:24,623,579...24,659,642
Ensembl chr13:24,624,417...24,659,639
JBrowse link
G ITPA inosine triphosphatase IBA
IEA
(PMID:21873635) GO_Central
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr17:32,458,351...32,474,827
Ensembl chr17:32,455,459...32,474,786
JBrowse link
G SMPDL3A sphingomyelin phosphodiesterase acid like 3A IEA Ensembl GO_REF:0000107 NCBI chr 1:39,848,641...39,869,184
Ensembl chr 1:39,848,641...39,868,731
JBrowse link
nucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NT5E 5'-nucleotidase ecto IEA InterPro GO_REF:0000002 NCBI chr 1:54,400,786...54,450,743
Ensembl chr 1:54,400,810...54,448,742
JBrowse link
G UPP1 uridine phosphorylase 1 IEA InterPro GO_REF:0000002 NCBI chr18:48,418,385...48,440,414
Ensembl chr18:48,418,385...48,440,736
JBrowse link
G UPP2 uridine phosphorylase 2 IEA InterPro GO_REF:0000002 NCBI chr15:65,088,652...65,131,739
Ensembl chr15:65,088,284...65,131,789
JBrowse link
propionyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT7 nudix hydrolase 7 ISO (MGI:MGI:6450264|PMID:18799520) UniProt PMID:18799520 MGI:MGI:6450264 NCBI chr 6:10,161,959...10,174,006
Ensembl chr 6:10,158,688...10,173,980
JBrowse link
purine deoxyribonucleoside triphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT15 nudix hydrolase 15 ISO (MGI:MGI:2663996|PMID:12767940) MGI PMID:12767940 MGI:MGI:2663996 NCBI chr11:19,572,963...19,584,565
Ensembl chr11:19,572,644...19,584,538
JBrowse link
purine nucleoside monophosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NT5C1A 5'-nucleotidase, cytosolic IA IEA Ensembl GO_REF:0000107 NCBI chr 6:95,473,259...95,497,645
Ensembl chr 6:95,473,261...95,497,000
JBrowse link
purine nucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT1 nudix hydrolase 1 ISO (PMID:10608900) UniProtKB PMID:10608900 NCBI chr 3:1,567,417...1,575,801
Ensembl chr 3:1,567,114...1,576,235
JBrowse link
G NUDT15 nudix hydrolase 15 ISO (PMID:26878724) UniProtKB PMID:26878724 NCBI chr11:19,572,963...19,584,565
Ensembl chr11:19,572,644...19,584,538
JBrowse link
purine ribonucleoside diphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENTPD1 ectonucleoside triphosphate diphosphohydrolase 1 ISO (MGI:MGI:2178511|PMID:11929769) MGI PMID:11929769 MGI:MGI:2178511 NCBI chr14:107,263,546...107,390,923
Ensembl chr14:107,263,449...107,506,052
JBrowse link
G ENTPD2 ectonucleoside triphosphate diphosphohydrolase 2 IEA Ensembl GO_REF:0000107
purine ribonucleoside salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADK adenosine kinase IEA Ensembl
UniProt
GO_REF:0000043, GO_REF:0000107 NCBI chr14:76,836,072...77,320,586
Ensembl chr14:76,836,095...77,322,416
JBrowse link
G APRT adenine phosphoribosyltransferase IEA Ensembl GO_REF:0000107 NCBI chr 6:890,272...893,278
Ensembl chr 6:890,831...893,277
JBrowse link
G HPRT1 hypoxanthine phosphoribosyltransferase 1 ISS
IBA
IEA
(PMID:21873635) UniProt
GO_Central
Ensembl
PMID:21873635 GO_REF:0000024, GO_REF:0000107 NCBI chr  X:110,321,144...110,357,902
Ensembl chr  X:110,321,208...110,357,899
JBrowse link
G MTAP methylthioadenosine phosphorylase IEA UniProt GO_REF:0000043 NCBI chr 1:200,882,954...200,934,389
Ensembl chr 1:200,882,955...200,934,639
JBrowse link
G PRTFDC1 phosphoribosyl transferase domain containing 1 IEA InterPro GO_REF:0000002 NCBI chr10:50,365,654...50,458,487
Ensembl chr10:50,365,786...50,463,271
JBrowse link
purine ribonucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HINT1 histidine triad nucleotide binding protein 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:133,469,765...133,475,813
Ensembl chr 2:133,467,137...133,475,734
JBrowse link
pyrimidine deoxyribonucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NT5C 5', 3'-nucleotidase, cytosolic IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:6,162,420...6,164,143
Ensembl chr12:6,139,439...6,164,142
JBrowse link
G NT5M 5',3'-nucleotidase, mitochondrial IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:60,979,496...60,994,577
Ensembl chr12:60,979,499...60,994,582
JBrowse link
ribonucleoside diphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT5 nudix hydrolase 5 IEA Ensembl GO_REF:0000107 NCBI chr10:59,765,444...59,787,773
Ensembl chr10:59,765,703...59,790,159
JBrowse link
S-adenosylmethioninamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMD1 adenosylmethionine decarboxylase 1 IEA UniProt GO_REF:0000041 NCBI chr 1:76,839,448...76,863,745
Ensembl chr 1:76,839,731...76,863,738
JBrowse link
UDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENTPD4 ectonucleoside triphosphate diphosphohydrolase 4 IEA Ensembl GO_REF:0000107 NCBI chr14:7,565,610...7,604,464
Ensembl chr14:7,565,604...7,594,057
JBrowse link
very long-chain fatty-acyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCD1 ATP binding cassette subfamily D member 1 IEA Ensembl GO_REF:0000107 NCBI chr  X:124,485,076...124,501,742
Ensembl chr  X:124,485,235...124,503,195
JBrowse link
XDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT16 nudix hydrolase 16 IEA Ensembl GO_REF:0000107 NCBI chr13:1,125,180...1,128,036
Ensembl chr13:1,122,541...1,128,041
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16524
    metabolic process 10565
      small molecule metabolic process 1659
        small molecule biosynthetic process 590
          nucleobase-containing small molecule biosynthetic process 75
            nucleoside biosynthetic process + 24
            nucleoside phosphate catabolic process + 55
Path 2
Term Annotations click to browse term
  biological_process 16524
    metabolic process 10565
      cellular metabolic process 9560
        cellular aromatic compound metabolic process 5101
          nucleobase-containing compound metabolic process 4902
            nucleobase-containing compound biosynthetic process 3553
              nucleobase-containing small molecule biosynthetic process 75
                nucleoside biosynthetic process + 24
                nucleoside phosphate catabolic process + 55
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.