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ONTOLOGY REPORT - ANNOTATIONS


Term:nucleobase-containing small molecule biosynthetic process
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Accession:GO:0034404 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of a nucleobase-containing small molecule: a nucleobase, a nucleoside, or a nucleotide.
Synonyms:exact_synonym: nucleobase, nucleoside and nucleotide anabolism;   nucleobase, nucleoside and nucleotide biosynthesis;   nucleobase, nucleoside and nucleotide formation;   nucleobase, nucleoside and nucleotide synthesis


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acetyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat1 acetyl-Coenzyme A acetyltransferase 1 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 9:53,580,522...53,610,350
Ensembl chr 9:53,580,522...53,610,382
JBrowse link
G Nudt7 nudix (nucleoside diphosphate linked moiety X)-type motif 7 IDA (MGI:MGI:2137102|PMID:11415433), (MGI:MGI:6450264|PMID:18799520) UniProt PMID:11415433, PMID:18799520 MGI:MGI:2137102, MGI:MGI:6450264 NCBI chr 8:114,133,574...114,154,731
Ensembl chr 8:114,133,557...114,154,739
JBrowse link
adenosine 5'-(hexahydrogen pentaphosphate) catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt10 nudix (nucleoside diphosphate linked moiety X)-type motif 10 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr  X:6,168,696...6,173,009
Ensembl chr  X:6,168,696...6,173,015
Ensembl chr  X:6,168,696...6,173,015
JBrowse link
G Nudt11 nudix (nucleoside diphosphate linked moiety X)-type motif 11 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr  X:6,047,471...6,054,751
Ensembl chr  X:6,047,453...6,055,110
JBrowse link
G Nudt3 nudix (nucleotide diphosphate linked moiety X)-type motif 3 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr17:27,579,382...27,623,452
Ensembl chr17:27,579,382...27,623,495
JBrowse link
G Nudt4 nudix (nucleoside diphosphate linked moiety X)-type motif 4 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr10:95,547,007...95,564,146
Ensembl chr10:95,547,007...95,564,146
JBrowse link
adenosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nt5e 5' nucleotidase, ecto IMP (MGI:MGI:3770326|PMID:16547283) MGI PMID:16547283 MGI:MGI:3770326 NCBI chr 9:88,327,609...88,372,089
Ensembl chr 9:88,327,197...88,372,092
JBrowse link
ADP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt9 nudix (nucleoside diphosphate linked moiety X)-type motif 9 IDA (MGI:MGI:2158549|PMID:11825615) MGI PMID:11825615 MGI:MGI:2158549 NCBI chr 5:104,045,538...104,065,378
Ensembl chr 5:104,046,306...104,065,379
JBrowse link
AMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nt5e 5' nucleotidase, ecto IMP
IBA
ISO
(MGI:MGI:3770326|PMID:16547283)
(MGI:MGI:6201960|PMID:21873635)
MGI
GO_Central
RGD
PMID:16547283, PMID:21873635 GO_REF:0000096, MGI:MGI:3770326, MGI:MGI:4417868, MGI:MGI:6201960 NCBI chr 9:88,327,609...88,372,089
Ensembl chr 9:88,327,197...88,372,092
JBrowse link
butyryl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt7 nudix (nucleoside diphosphate linked moiety X)-type motif 7 IDA (MGI:MGI:6450264|PMID:18799520) UniProt PMID:18799520 MGI:MGI:6450264 NCBI chr 8:114,133,574...114,154,731
Ensembl chr 8:114,133,557...114,154,739
JBrowse link
cAMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pde4d phosphodiesterase 4D, cAMP specific IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr13:108,654,177...109,955,969
Ensembl chr13:108,449,948...109,953,461
JBrowse link
cGMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pde1a phosphodiesterase 1A, calmodulin-dependent ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr 2:79,834,453...80,196,522
Ensembl chr 2:79,834,453...80,129,458
JBrowse link
G Pde2a phosphodiesterase 2A, cGMP-stimulated ISO
IBA
IMP
(MGI:MGI:6201960|PMID:21873635)
(MGI:MGI:4420377|PMID:19632989)
MGI
GO_Central
UniProtKB
PMID:19632989, PMID:21873635 GO_REF:0000096, MGI:MGI:4420377, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr 7:101,421,691...101,512,829
Ensembl chr 7:101,410,886...101,512,819
Ensembl chr 7:101,410,886...101,512,819
JBrowse link
G Pde5a phosphodiesterase 5A, cGMP-specific IDA (MGI:MGI:2450821|PMID:12554648) MGI PMID:12554648 MGI:MGI:2450821 NCBI chr 3:122,729,158...122,859,374
Ensembl chr 3:122,728,947...122,859,374
JBrowse link
G Pde9a phosphodiesterase 9A IMP
IBA
ISO
IDA
(MGI:MGI:5634842|PMID:25799991)
(MGI:MGI:6201960|PMID:21873635)
(MGI:MGI:1266874|PMID:9624145)
UniProtKB
GO_Central
MGI
PMID:9624145, PMID:21873635, PMID:25799991 GO_REF:0000096, MGI:MGI:1266874, MGI:MGI:4834177, MGI:MGI:5634842, MGI:MGI:6201960 NCBI chr17:31,386,105...31,476,309
Ensembl chr17:31,386,210...31,476,310
JBrowse link
coenzyme A catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt7 nudix (nucleoside diphosphate linked moiety X)-type motif 7 IBA
IDA
(MGI:MGI:6201960|PMID:21873635)
(MGI:MGI:2137102|PMID:11415433), (MGI:MGI:6450264|PMID:18799520)
GO_Central
MGI
PMID:11415433, PMID:18799520, PMID:21873635 MGI:MGI:2137102, MGI:MGI:6201960, MGI:MGI:6450264 NCBI chr 8:114,133,574...114,154,731
Ensembl chr 8:114,133,557...114,154,739
JBrowse link
cyclic nucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnp 2',3'-cyclic nucleotide 3' phosphodiesterase IEA UniProtKB GO_REF:0000002, MGI:MGI:2152098 NCBI chr11:100,574,909...100,591,875
Ensembl chr11:100,574,904...100,591,729
JBrowse link
dADP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt18 nudix (nucleoside diphosphate linked moiety X)-type motif 18 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr14:70,577,824...70,582,688
Ensembl chr14:70,577,637...70,582,688
JBrowse link
dATP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase IMP
IDA
(MGI:MGI:72798|PMID:7731963)
(MGI:MGI:2155238|PMID:9478961), (MGI:MGI:3619310|PMID:14607964)
(MGI:MGI:76875|PMID:7592575)
(MGI:MGI:74163|PMID:7670465)
MGI PMID:7592575, PMID:7670465, PMID:7731963, PMID:9478961, PMID:14607964 MGI:MGI:2155238, MGI:MGI:3619310, MGI:MGI:72798, MGI:MGI:74163, MGI:MGI:76875 NCBI chr 2:163,726,571...163,750,239
Ensembl chr 2:163,726,584...163,750,239
JBrowse link
G Nudt1 nudix (nucleoside diphosphate linked moiety X)-type motif 1 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 5:140,321,622...140,338,137
Ensembl chr 5:140,321,656...140,338,137
JBrowse link
G Samhd1 SAM domain and HD domain, 1 ISO
IDA
(MGI:MGI:5828027|PMID:27920203) MGI PMID:27920203 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:5828027 NCBI chr 2:157,097,534...157,135,096
Ensembl chr 2:157,097,533...157,135,265
JBrowse link
dCTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dctpp1 dCTP pyrophosphatase 1 ISO
IBA
(MGI:MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr 7:127,256,959...127,260,667
Ensembl chr 7:127,256,959...127,260,709
JBrowse link
deoxyribonucleoside monophosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnph1 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 ISO
IBA
(MGI:MGI:6201960|PMID:21873635) RGD
GO_Central
MGI
PMID:21873635 GO_REF:0000096, MGI:MGI:4417868, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr17:46,496,789...46,499,618
Ensembl chr17:46,496,711...46,499,624
JBrowse link
deoxyribonucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dera deoxyribose-phosphate aldolase (putative) IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 6:137,754,577...137,837,872
Ensembl chr 6:137,754,546...137,857,340
JBrowse link
G Nt5c 5',3'-nucleotidase, cytosolic IDA (MGI:MGI:1353788|PMID:10681516) MGI PMID:10681516 MGI:MGI:1353788 NCBI chr11:115,490,420...115,492,070
Ensembl chr11:115,490,420...115,491,862
JBrowse link
G Nt5m 5',3'-nucleotidase, mitochondrial IEA UniProtKB GO_REF:0000002, MGI:MGI:2152098 NCBI chr11:59,847,947...59,876,533
Ensembl chr11:59,839,447...59,880,968
JBrowse link
G Samhd1 SAM domain and HD domain, 1 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 2:157,097,534...157,135,096
Ensembl chr 2:157,097,533...157,135,265
JBrowse link
dGDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt18 nudix (nucleoside diphosphate linked moiety X)-type motif 18 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr14:70,577,824...70,582,688
Ensembl chr14:70,577,637...70,582,688
JBrowse link
dGTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt1 nudix (nucleoside diphosphate linked moiety X)-type motif 1 IDA
ISO
(MGI:MGI:77076|PMID:7592783) MGI PMID:7592783 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:77076 NCBI chr 5:140,321,622...140,338,137
Ensembl chr 5:140,321,656...140,338,137
JBrowse link
G Nudt15 nudix (nucleoside diphosphate linked moiety X)-type motif 15 ISO
IBA
(MGI:MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr14:73,518,880...73,548,242
Ensembl chr14:73,518,877...73,548,242
JBrowse link
G Samhd1 SAM domain and HD domain, 1 ISO
IBA
(MGI:MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr 2:157,097,534...157,135,096
Ensembl chr 2:157,097,533...157,135,265
JBrowse link
diadenosine hexaphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt10 nudix (nucleoside diphosphate linked moiety X)-type motif 10 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr  X:6,168,696...6,173,009
Ensembl chr  X:6,168,696...6,173,015
Ensembl chr  X:6,168,696...6,173,015
JBrowse link
G Nudt11 nudix (nucleoside diphosphate linked moiety X)-type motif 11 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr  X:6,047,471...6,054,751
Ensembl chr  X:6,047,453...6,055,110
JBrowse link
G Nudt3 nudix (nucleotide diphosphate linked moiety X)-type motif 3 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr17:27,579,382...27,623,452
Ensembl chr17:27,579,382...27,623,495
JBrowse link
G Nudt4 nudix (nucleoside diphosphate linked moiety X)-type motif 4 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr10:95,547,007...95,564,146
Ensembl chr10:95,547,007...95,564,146
JBrowse link
diadenosine pentaphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt10 nudix (nucleoside diphosphate linked moiety X)-type motif 10 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr  X:6,168,696...6,173,009
Ensembl chr  X:6,168,696...6,173,015
Ensembl chr  X:6,168,696...6,173,015
JBrowse link
G Nudt11 nudix (nucleoside diphosphate linked moiety X)-type motif 11 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr  X:6,047,471...6,054,751
Ensembl chr  X:6,047,453...6,055,110
JBrowse link
G Nudt3 nudix (nucleotide diphosphate linked moiety X)-type motif 3 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr17:27,579,382...27,623,452
Ensembl chr17:27,579,382...27,623,495
JBrowse link
G Nudt4 nudix (nucleoside diphosphate linked moiety X)-type motif 4 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr10:95,547,007...95,564,146
Ensembl chr10:95,547,007...95,564,146
JBrowse link
diadenosine triphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fhit fragile histidine triad gene ISO
IBA
(MGI:MGI:6201960|PMID:21873635) RGD
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4417868, MGI:MGI:6201960 NCBI chr14:9,550,092...11,162,061
Ensembl chr14:9,550,092...11,162,035
JBrowse link
dITP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt16 nudix (nucleoside diphosphate linked moiety X)-type motif 16 IGI (MGI:MGI:5009783|PMID:20081199) MGI PMID:20081199 MGI:MGI:5009783 NCBI chr 9:105,129,332...105,133,133
Ensembl chr 9:105,128,903...105,131,824
JBrowse link
dTTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dctpp1 dCTP pyrophosphatase 1 NOT ISO (PMID:24467396) UniProtKB PMID:24467396 NCBI chr 7:127,256,959...127,260,667
Ensembl chr 7:127,256,959...127,260,709
JBrowse link
dUMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nt5m 5',3'-nucleotidase, mitochondrial IDA (MGI:MGI:2388903|PMID:12234672) MGI PMID:12234672 MGI:MGI:2388903 NCBI chr11:59,847,947...59,876,533
Ensembl chr11:59,839,447...59,880,968
JBrowse link
dUTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dut deoxyuridine triphosphatase ISO
IBA
(MGI:MGI:6201960|PMID:21873635) RGD
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4417868, MGI:MGI:6201960 NCBI chr 2:125,247,248...125,259,049
Ensembl chr 2:125,247,190...125,258,608
JBrowse link
flavin adenine dinucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vcp valosin containing protein ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 4:42,979,964...43,000,507
Ensembl chr 4:42,979,963...43,000,507
JBrowse link
GDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Guk1 guanylate kinase 1 ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr11:59,183,855...59,192,207
Ensembl chr11:59,183,875...59,192,212
JBrowse link
GDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt18 nudix (nucleoside diphosphate linked moiety X)-type motif 18 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr14:70,577,824...70,582,688
Ensembl chr14:70,577,637...70,582,688
JBrowse link
GMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gmps guanine monophosphate synthetase ISO
IBA
(MGI:MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000008, MGI:MGI:2154458, MGI:MGI:6201960 NCBI chr 3:63,963,633...64,021,554
Ensembl chr 3:63,976,106...64,022,579
JBrowse link
G Impdh1 inosine monophosphate dehydrogenase 1 IEA UniProtKB GO_REF:0000004, MGI:MGI:1354194 NCBI chr 6:29,200,436...29,216,364
Ensembl chr 6:29,200,434...29,216,364
JBrowse link
G Impdh2 inosine monophosphate dehydrogenase 2 IEA UniProtKB GO_REF:0000004, MGI:MGI:1354194 NCBI chr 9:108,560,436...108,565,577
Ensembl chr 9:108,560,286...108,565,584
JBrowse link
GMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gm13377 predicted gene 13377 NOT ISO (PMID:21054786) UniProtKB PMID:21054786 NCBI chr 2:21,044,809...21,139,682
Ensembl chr 2:21,044,808...21,141,954
JBrowse link
G Gmpr2 guanosine monophosphate reductase 2 ISO (MGI:MGI:2661317|PMID:12669231) MGI PMID:12669231 MGI:MGI:2661317 NCBI chr14:55,672,235...55,687,861
Ensembl chr14:55,671,941...55,679,200
JBrowse link
G Hprt hypoxanthine guanine phosphoribosyl transferase ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr  X:52,988,078...53,021,660
Ensembl chr  X:52,988,137...53,021,659
JBrowse link
GMP salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hprt hypoxanthine guanine phosphoribosyl transferase IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr  X:52,988,078...53,021,660
Ensembl chr  X:52,988,137...53,021,659
JBrowse link
GTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Impdh1 inosine monophosphate dehydrogenase 1 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 6:29,200,436...29,216,364
Ensembl chr 6:29,200,434...29,216,364
JBrowse link
G Impdh2 inosine monophosphate dehydrogenase 2 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 9:108,560,436...108,565,577
Ensembl chr 9:108,560,286...108,565,584
JBrowse link
G Nme1 NME/NM23 nucleoside diphosphate kinase 1 IEA UniProtKB GO_REF:0000002, MGI:MGI:2152098 NCBI chr11:93,958,925...93,968,272
Ensembl chr11:93,956,979...93,968,521
JBrowse link
G Nme2 NME/NM23 nucleoside diphosphate kinase 2 ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr11:93,949,814...93,956,256
Ensembl chr11:93,949,814...93,956,259
JBrowse link
G Nme3 NME/NM23 nucleoside diphosphate kinase 3 IEA UniProtKB GO_REF:0000002, MGI:MGI:2152098 NCBI chr17:24,896,500...24,897,531
Ensembl chr17:24,896,500...24,897,522
JBrowse link
G Nme4 NME/NM23 nucleoside diphosphate kinase 4 IEA UniProtKB GO_REF:0000002, MGI:MGI:2152098 NCBI chr17:26,091,734...26,095,523
Ensembl chr17:26,091,734...26,095,602
JBrowse link
G Nme5 NME/NM23 family member 5 IEA UniProtKB GO_REF:0000002, MGI:MGI:2152098 NCBI chr18:34,562,634...34,579,152
Ensembl chr18:34,562,634...34,579,115
JBrowse link
G Nme6 NME/NM23 nucleoside diphosphate kinase 6 IEA UniProtKB GO_REF:0000002, MGI:MGI:2152098 NCBI chr 9:109,832,722...109,842,974
Ensembl chr 9:109,832,749...109,843,116
JBrowse link
G Nme7 NME/NM23 family member 7 IEA UniProtKB GO_REF:0000002, MGI:MGI:2152098 NCBI chr 1:164,307,524...164,437,300
Ensembl chr 1:164,304,121...164,437,725
JBrowse link
G Pnp purine-nucleoside phosphorylase IMP (MGI:MGI:1859999|PMID:10859343) MGI PMID:10859343 MGI:MGI:1859999 NCBI chr14:50,944,303...50,953,412
Ensembl chr14:50,931,082...50,965,237
JBrowse link
IDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt16 nudix (nucleoside diphosphate linked moiety X)-type motif 16 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 9:105,129,332...105,133,133
Ensembl chr 9:105,128,903...105,131,824
JBrowse link
G Nudt9 nudix (nucleoside diphosphate linked moiety X)-type motif 9 IDA (MGI:MGI:2158549|PMID:11825615) MGI PMID:11825615 MGI:MGI:2158549 NCBI chr 5:104,045,538...104,065,378
Ensembl chr 5:104,046,306...104,065,379
JBrowse link
inosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase IMP
IBA
IDA
ISO
(MGI:MGI:3531253|PMID:8663040)
(MGI:MGI:6201960|PMID:21873635)
(MGI:MGI:1095761|PMID:9272950), (MGI:MGI:3531253|PMID:8663040), (MGI:MGI:3808984|PMID:2015347), (MGI:MGI:4835158|PMID:8672487), (MGI:MGI:49990|PMID:1618849), (MGI:MGI:76875|PMID:7592575), (MGI:MGI:83255|PMID:8894685)
(MGI:MGI:1095761|PMID:9272950), (MGI:MGI:72798|PMID:7731963)
(MGI:MGI:3640719|PMID:10720488)
MGI
GO_Central
PMID:1618849, PMID:2015347, PMID:7592575, PMID:7731963, PMID:8663040, PMID:8672487, PMID:8894685, PMID:9272950, PMID:10720488, PMID:21873635 GO_REF:0000008, MGI:MGI:1095761, MGI:MGI:2154458, MGI:MGI:3531253, MGI:MGI:3640719, MGI:MGI:3808984, MGI:MGI:4835158, MGI:MGI:49990, MGI:MGI:6201960, MGI:MGI:72798, MGI:MGI:76875, MGI:MGI:83255 NCBI chr 2:163,726,571...163,750,239
Ensembl chr 2:163,726,584...163,750,239
JBrowse link
G Adal adenosine deaminase-like IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 2:121,140,044...121,159,440
Ensembl chr 2:121,140,428...121,156,680
JBrowse link
G Ak1 adenylate kinase 1 ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr 2:32,621,758...32,635,058
Ensembl chr 2:32,621,758...32,635,058
JBrowse link
ITP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Itpa inosine triphosphatase (nucleoside triphosphate pyrophosphatase) IMP (MGI:MGI:5009783|PMID:20081199) MGI PMID:20081199 MGI:MGI:5009783 NCBI chr 2:130,664,692...130,681,614
Ensembl chr 2:130,667,610...130,681,614
JBrowse link
long-chain fatty-acyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acot7 acyl-CoA thioesterase 7 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 4:152,178,100...152,271,855
Ensembl chr 4:152,178,134...152,271,855
JBrowse link
malonyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mlycd malonyl-CoA decarboxylase IDA
ISO
IBA
(MGI:MGI:5501374|PMID:23746352)
(MGI:MGI:6201960|PMID:21873635)
UniProtKB
MGI
GO_Central
PMID:21873635, PMID:23746352 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:5501374, MGI:MGI:6201960 NCBI chr 8:119,394,852...119,421,838
Ensembl chr 8:119,394,878...119,411,102
JBrowse link
medium-chain fatty-acyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acot7 acyl-CoA thioesterase 7 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 4:152,178,100...152,271,855
Ensembl chr 4:152,178,134...152,271,855
JBrowse link
G Nudt7 nudix (nucleoside diphosphate linked moiety X)-type motif 7 IDA (MGI:MGI:6450264|PMID:18799520) UniProt PMID:18799520 MGI:MGI:6450264 NCBI chr 8:114,133,574...114,154,731
Ensembl chr 8:114,133,557...114,154,739
JBrowse link
NAD catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Art2b ADP-ribosyltransferase 2b IDA (MGI:MGI:5426136|PMID:11011142) UniProtKB PMID:11011142 MGI:MGI:5426136 NCBI chr 7:101,575,729...101,585,591
Ensembl chr 7:101,576,970...101,585,600
JBrowse link
G Nudt12 nudix (nucleoside diphosphate linked moiety X)-type motif 12 ISO
IBA
(MGI:MGI:5297790|PMID:12790796)
(MGI:MGI:6201960|PMID:21873635)
MGI
GO_Central
PMID:12790796, PMID:21873635 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:5297790, MGI:MGI:6201960 NCBI chr17:59,000,107...59,013,367
Ensembl chr17:58,999,618...59,013,372
JBrowse link
G Nudt17 nudix (nucleoside diphosphate linked moiety X)-type motif 17 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 3:96,705,892...96,708,916
Ensembl chr 3:96,706,067...96,708,562
JBrowse link
G Sarm1 sterile alpha and HEAT/Armadillo motif containing 1 IDA
IMP
ISO
(MGI:MGI:6114587|PMID:28334607)
(MGI:MGI:6206974|PMID:27735788)
UniProt
MGI
PMID:27735788, PMID:28334607 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6114587, MGI:MGI:6206974 NCBI chr11:78,470,273...78,497,816
Ensembl chr11:78,472,330...78,497,754
JBrowse link
NADP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aspdh aspartate dehydrogenase domain containing IEA UniProtKB GO_REF:0000002, MGI:MGI:2152098 NCBI chr 7:44,465,435...44,467,751
Ensembl chr 7:44,465,391...44,467,758
JBrowse link
G Ncf1 neutrophil cytosolic factor 1 ISO (MGI:MGI:1351390|PMID:10647999) MGI PMID:10647999 MGI:MGI:1351390 NCBI chr 5:134,220,053...134,229,628
Ensembl chr 5:134,220,053...134,229,625
JBrowse link
G Ncf2 neutrophil cytosolic factor 2 ISO (MGI:MGI:1351390|PMID:10647999) MGI PMID:10647999 MGI:MGI:1351390 NCBI chr 1:152,800,153...152,836,990
Ensembl chr 1:152,800,194...152,836,991
JBrowse link
G Nudt12 nudix (nucleoside diphosphate linked moiety X)-type motif 12 ISO
IBA
(MGI:MGI:5297790|PMID:12790796)
(MGI:MGI:6201960|PMID:21873635)
MGI
GO_Central
PMID:12790796, PMID:21873635 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:5297790, MGI:MGI:6201960 NCBI chr17:59,000,107...59,013,367
Ensembl chr17:58,999,618...59,013,372
JBrowse link
G Nudt13 nudix (nucleoside diphosphate linked moiety X)-type motif 13 IDA (MGI:MGI:6368098|PMID:28755312) UniProt PMID:28755312 MGI:MGI:6368098 NCBI chr14:20,294,679...20,317,584
Ensembl chr14:20,294,697...20,317,578
JBrowse link
G Nudt17 nudix (nucleoside diphosphate linked moiety X)-type motif 17 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 3:96,705,892...96,708,916
Ensembl chr 3:96,706,067...96,708,562
JBrowse link
nucleoside diphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Entpd3 ectonucleoside triphosphate diphosphohydrolase 3 IDA (MGI:MGI:3043501|PMID:15130768) MGI PMID:15130768 MGI:MGI:3043501 NCBI chr 9:120,539,818...120,568,327
Ensembl chr 9:120,539,818...120,568,327
JBrowse link
nucleoside phosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt15 nudix (nucleoside diphosphate linked moiety X)-type motif 15 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr14:73,518,880...73,548,242
Ensembl chr14:73,518,877...73,548,242
JBrowse link
nucleoside triphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dctpp1 dCTP pyrophosphatase 1 IDA
IBA
ISO
(MGI:MGI:3844778|PMID:19220460)
(MGI:MGI:6201960|PMID:21873635)
UniProtKB
GO_Central
MGI
PMID:19220460, PMID:21873635 GO_REF:0000096, MGI:MGI:3844778, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr 7:127,256,959...127,260,667
Ensembl chr 7:127,256,959...127,260,709
JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 ISO
IBA
(MGI:MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr10:24,637,914...24,712,159
Ensembl chr10:24,637,914...24,712,159
JBrowse link
G Enpp3 ectonucleotide pyrophosphatase/phosphodiesterase 3 ISO
IBA
(MGI:MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr10:24,773,814...24,836,195
Ensembl chr10:24,772,406...24,842,823
JBrowse link
G Entpd3 ectonucleoside triphosphate diphosphohydrolase 3 IDA (MGI:MGI:3043501|PMID:15130768) MGI PMID:15130768 MGI:MGI:3043501 NCBI chr 9:120,539,818...120,568,327
Ensembl chr 9:120,539,818...120,568,327
JBrowse link
G Itpa inosine triphosphatase (nucleoside triphosphate pyrophosphatase) IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 2:130,664,692...130,681,614
Ensembl chr 2:130,667,610...130,681,614
JBrowse link
G Smpdl3a sphingomyelin phosphodiesterase, acid-like 3A ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr10:57,794,544...57,811,830
Ensembl chr10:57,794,335...57,811,830
JBrowse link
nucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Enpp5 ectonucleotide pyrophosphatase/phosphodiesterase 5 ISA (MGI:MGI:1929408|PMID:11027689) MGI PMID:11027689 MGI:MGI:1929408 NCBI chr17:44,078,802...44,086,567
Ensembl chr17:44,078,813...44,086,567
JBrowse link
G Nt5e 5' nucleotidase, ecto IEA UniProt GO_REF:0000002, MGI:MGI:2152098 NCBI chr 9:88,327,609...88,372,089
Ensembl chr 9:88,327,197...88,372,092
JBrowse link
G Upp1 uridine phosphorylase 1 IEA UniProtKB GO_REF:0000002, MGI:MGI:2152098 NCBI chr11:9,118,008...9,136,170
Ensembl chr11:9,118,103...9,136,170
JBrowse link
G Upp2 uridine phosphorylase 2 IEA UniProtKB GO_REF:0000002, MGI:MGI:2152098 NCBI chr 2:58,566,317...58,795,846
Ensembl chr 2:58,567,298...58,792,971
JBrowse link
propionyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt7 nudix (nucleoside diphosphate linked moiety X)-type motif 7 IDA (MGI:MGI:6450264|PMID:18799520) UniProt PMID:18799520 MGI:MGI:6450264 NCBI chr 8:114,133,574...114,154,731
Ensembl chr 8:114,133,557...114,154,739
JBrowse link
purine deoxyribonucleoside triphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt15 nudix (nucleoside diphosphate linked moiety X)-type motif 15 IDA (MGI:MGI:2663996|PMID:12767940) MGI PMID:12767940 MGI:MGI:2663996 NCBI chr14:73,518,880...73,548,242
Ensembl chr14:73,518,877...73,548,242
JBrowse link
purine nucleoside monophosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nt5c1a 5'-nucleotidase, cytosolic IA IMP (MGI:MGI:5295913|PMID:21873433) MGI PMID:21873433 MGI:MGI:5295913 NCBI chr 4:123,201,230...123,225,339
Ensembl chr 4:123,201,504...123,216,275
JBrowse link
purine nucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt1 nudix (nucleoside diphosphate linked moiety X)-type motif 1 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 5:140,321,622...140,338,137
Ensembl chr 5:140,321,656...140,338,137
JBrowse link
G Nudt15 nudix (nucleoside diphosphate linked moiety X)-type motif 15 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr14:73,518,880...73,548,242
Ensembl chr14:73,518,877...73,548,242
JBrowse link
purine ribonucleoside diphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Entpd1 ectonucleoside triphosphate diphosphohydrolase 1 IDA (MGI:MGI:2178511|PMID:11929769) MGI PMID:11929769 MGI:MGI:2178511 NCBI chr19:40,612,366...40,741,602
Ensembl chr19:40,612,366...40,741,602
JBrowse link
G Entpd2 ectonucleoside triphosphate diphosphohydrolase 2 IDA (MGI:MGI:2178511|PMID:11929769) MGI PMID:11929769 MGI:MGI:2178511 NCBI chr 2:25,395,874...25,401,323
Ensembl chr 2:25,395,874...25,401,321
JBrowse link
purine ribonucleoside salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adk adenosine kinase IDA (MGI:MGI:3027665|PMID:14736855) MGI PMID:14736855 MGI:MGI:3027665 NCBI chr14:21,052,574...21,448,569
Ensembl chr14:21,052,574...21,448,569
JBrowse link
G Aprt adenine phosphoribosyl transferase IMP
IGI
(MGI:MGI:52624|PMID:8485579) MGI PMID:8485579 MGI:MGI:52624 NCBI chr 8:122,574,637...122,576,907
Ensembl chr 8:122,574,635...122,576,909
JBrowse link
G Hprt hypoxanthine guanine phosphoribosyl transferase IGI
IBA
IMP
ISO
(MGI:MGI:52624|PMID:8485579)
(MGI:MGI:6201960|PMID:21873635)
(MGI:MGI:1331314|PMID:10037486), (MGI:MGI:2675193|PMID:12944494), (MGI:MGI:52624|PMID:8485579), (MGI:MGI:60112|PMID:8492116)
MGI
GO_Central
PMID:8485579, PMID:8492116, PMID:10037486, PMID:12944494, PMID:21873635 GO_REF:0000096, MGI:MGI:1331314, MGI:MGI:2675193, MGI:MGI:4834177, MGI:MGI:52624, MGI:MGI:60112, MGI:MGI:6201960 NCBI chr  X:52,988,078...53,021,660
Ensembl chr  X:52,988,137...53,021,659
JBrowse link
G Mtap methylthioadenosine phosphorylase IEA UniProtKB GO_REF:0000004, MGI:MGI:1354194 NCBI chr 4:89,137,370...89,181,090
Ensembl chr 4:89,137,122...89,181,081
JBrowse link
purine ribonucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hint1 histidine triad nucleotide binding protein 1 ISO
IBA
(MGI:MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr11:54,866,383...54,870,506
Ensembl chr11:54,866,383...54,870,501
JBrowse link
pyrimidine deoxyribonucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nt5c 5',3'-nucleotidase, cytosolic ISO
IBA
(MGI:MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr11:115,490,420...115,492,070
Ensembl chr11:115,490,420...115,491,862
JBrowse link
G Nt5m 5',3'-nucleotidase, mitochondrial IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr11:59,847,947...59,876,533
Ensembl chr11:59,839,447...59,880,968
JBrowse link
ribonucleoside diphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cant1 calcium activated nucleotidase 1 IC (MGI:MGI:2387884|PMID:12167635) MGI PMID:12167635 MGI:MGI:2387884 NCBI chr11:118,406,289...118,419,134
Ensembl chr11:118,406,289...118,419,086
JBrowse link
G Entpd7 ectonucleoside triphosphate diphosphohydrolase 7 ISO (MGI:MGI:1934730|PMID:11278936) MGI PMID:11278936 MGI:MGI:1934730 NCBI chr19:43,689,689...43,733,853
Ensembl chr19:43,689,672...43,733,697
JBrowse link
G Nudt5 nudix (nucleoside diphosphate linked moiety X)-type motif 5 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 2:5,845,034...5,870,820
Ensembl chr 2:5,845,019...5,871,895
JBrowse link
ribonucleoside triphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Entpd7 ectonucleoside triphosphate diphosphohydrolase 7 ISO (MGI:MGI:1934730|PMID:11278936) MGI PMID:11278936 MGI:MGI:1934730 NCBI chr19:43,689,689...43,733,853
Ensembl chr19:43,689,672...43,733,697
JBrowse link
UDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Entpd4 ectonucleoside triphosphate diphosphohydrolase 4 ISO (PMID:9556635) UniProtKB PMID:9556635 NCBI chr14:69,337,151...69,366,742
Ensembl chr14:69,337,174...69,367,270
JBrowse link
very long-chain fatty-acyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd1 ATP-binding cassette, sub-family D (ALD), member 1 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr  X:73,716,597...73,738,534
Ensembl chr  X:73,716,597...73,738,534
JBrowse link
XDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt16 nudix (nucleoside diphosphate linked moiety X)-type motif 16 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 9:105,129,332...105,133,133
Ensembl chr 9:105,128,903...105,131,824
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 23369
    metabolic process 11273
      small molecule metabolic process 1760
        small molecule biosynthetic process 622
          nucleobase-containing small molecule biosynthetic process 75
            nucleoside biosynthetic process + 20
            nucleoside phosphate catabolic process + 58
Path 2
Term Annotations click to browse term
  biological_process 23369
    metabolic process 11273
      cellular metabolic process 10050
        cellular aromatic compound metabolic process 5413
          nucleobase-containing compound metabolic process 5182
            nucleobase-containing compound biosynthetic process 3737
              nucleobase-containing small molecule biosynthetic process 75
                nucleoside biosynthetic process + 20
                nucleoside phosphate catabolic process + 58
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.