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ONTOLOGY REPORT - ANNOTATIONS


Term:nucleobase-containing small molecule biosynthetic process
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Accession:GO:0034404 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of a nucleobase-containing small molecule: a nucleobase, a nucleoside, or a nucleotide.
Synonyms:exact_synonym: nucleobase, nucleoside and nucleotide anabolism;   nucleobase, nucleoside and nucleotide biosynthesis;   nucleobase, nucleoside and nucleotide formation;   nucleobase, nucleoside and nucleotide synthesis


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acetyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAT1 acetyl-CoA acetyltransferase 1 IEA Ensembl GO_REF:0000107 NCBI chr 5:24,361,301...24,379,807
Ensembl chr 5:24,361,301...24,379,812
JBrowse link
G NUDT7 nudix hydrolase 7 IEA Ensembl GO_REF:0000107 NCBI chr 5:73,515,819...73,527,780
Ensembl chr 5:73,516,166...73,527,716
JBrowse link
adenosine 5'-(hexahydrogen pentaphosphate) catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC491890 diphosphoinositol polyphosphate phosphohydrolase 3-beta IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:44,061,199...44,068,750 JBrowse link
G NUDT11 nudix hydrolase 11 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:43,916,315...43,923,410 JBrowse link
G NUDT3 nudix hydrolase 3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:3,559,347...3,687,026
Ensembl chr12:3,567,206...3,687,026
JBrowse link
G NUDT4 nudix hydrolase 4 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:33,627,441...33,644,350
Ensembl chr15:33,627,846...33,641,795
JBrowse link
adenosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NT5E 5'-nucleotidase ecto IEA Ensembl GO_REF:0000107 NCBI chr12:45,491,028...45,520,019
Ensembl chr12:45,491,733...45,518,405
JBrowse link
ADP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT9 nudix hydrolase 9 IEA Ensembl GO_REF:0000107 NCBI chr32:10,862,532...10,887,162
Ensembl chr32:10,862,527...10,886,863
JBrowse link
AMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NT5E 5'-nucleotidase ecto IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:45,491,028...45,520,019
Ensembl chr12:45,491,733...45,518,405
JBrowse link
butyryl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT7 nudix hydrolase 7 ISO (MGI:MGI:6450264|PMID:18799520) UniProt PMID:18799520 MGI:MGI:6450264 NCBI chr 5:73,515,819...73,527,780
Ensembl chr 5:73,516,166...73,527,716
JBrowse link
cAMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDE4A phosphodiesterase 4A IEA UniProt GO_REF:0000041 NCBI chr20:50,672,012...50,723,318
Ensembl chr20:50,672,363...50,811,160
JBrowse link
G PDE4B phosphodiesterase 4B IEA UniProt GO_REF:0000041 NCBI chr 5:44,063,145...44,606,070
Ensembl chr 5:44,065,106...44,500,999
JBrowse link
G PDE4C phosphodiesterase 4C IEA UniProt GO_REF:0000041 NCBI chr20:44,767,187...44,792,887
Ensembl chr20:44,742,161...44,791,053
JBrowse link
G PDE4D phosphodiesterase 4D IBA
IEA
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000041 NCBI chr 2:45,843,767...47,245,263
Ensembl chr 2:45,846,294...46,949,912
JBrowse link
G PDE8A phosphodiesterase 8A IEA UniProt GO_REF:0000041 NCBI chr 3:54,278,498...54,367,492
Ensembl chr 3:54,128,680...54,367,400
JBrowse link
G SLC28A1 solute carrier family 28 member 1 IEA UniProt GO_REF:0000041 NCBI chr 3:54,128,172...54,177,544
Ensembl chr 3:54,128,680...54,367,400
JBrowse link
cGMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDE1A phosphodiesterase 1A ISO RGD PMID:16514069 RGD:2312521 NCBI chr36:25,250,398...25,591,775
Ensembl chr36:25,256,314...25,578,768
JBrowse link
G PDE2A phosphodiesterase 2A IEA
IBA
ISS
(PMID:21873635) Ensembl
GO_Central
UniProt
PMID:21873635 GO_REF:0000024, GO_REF:0000107 NCBI chr21:25,542,030...25,635,661
Ensembl chr21:25,542,268...25,635,660
JBrowse link
G PDE5A phosphodiesterase 5A IEA UniProtKB
Ensembl
GO_REF:0000041, GO_REF:0000107 NCBI chr32:38,272,573...38,407,517
Ensembl chr32:38,244,338...38,407,522
JBrowse link
G PDE9A phosphodiesterase 9A IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr31:36,949,777...37,036,237
Ensembl chr31:36,949,723...37,035,809
JBrowse link
coenzyme A catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT7 nudix hydrolase 7 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:73,515,819...73,527,780
Ensembl chr 5:73,516,166...73,527,716
JBrowse link
cyclic nucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNP 2',3'-cyclic nucleotide 3' phosphodiesterase IEA InterPro GO_REF:0000002 NCBI chr 9:20,888,350...20,896,139
Ensembl chr 9:20,886,574...20,896,079
JBrowse link
dADP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT18 nudix hydrolase 18 IEA Ensembl GO_REF:0000107 NCBI chr25:35,139,580...35,144,066
Ensembl chr25:35,140,969...35,143,063
JBrowse link
dATP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase IEA Ensembl GO_REF:0000107 NCBI chr24:32,083,786...32,119,810
Ensembl chr24:32,083,931...32,111,160
JBrowse link
G NUDT1 nudix hydrolase 1 IEA Ensembl GO_REF:0000107 NCBI chr 6:14,874,459...14,881,517
Ensembl chr 6:14,859,518...14,882,704
JBrowse link
G SAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 IEA Ensembl GO_REF:0000107 NCBI chr24:25,623,997...25,676,336
Ensembl chr24:25,626,134...25,680,902
JBrowse link
dCTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCTPP1 dCTP pyrophosphatase 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:17,679,681...17,683,644
Ensembl chr 6:17,679,722...17,683,570
JBrowse link
deoxyribonucleoside monophosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNPH1 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:11,715,215...11,718,622
Ensembl chr12:11,715,271...11,718,717
JBrowse link
deoxyribonucleoside triphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ITPA inosine triphosphatase IEA UniProt GO_REF:0000104 NCBI chr24:18,070,980...18,081,815
Ensembl chr24:18,064,983...18,082,163
JBrowse link
deoxyribonucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DERA deoxyribose-phosphate aldolase IBA
IEA
(PMID:21873635) GO_Central
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr27:30,675,225...30,741,202
Ensembl chr27:30,675,247...30,817,388
JBrowse link
G NT5C 5', 3'-nucleotidase, cytosolic ISO (MGI:MGI:1353788|PMID:10681516) MGI PMID:10681516 MGI:MGI:1353788 NCBI chr 9:5,342,793...5,344,432
Ensembl chr 9:5,343,378...5,344,380
JBrowse link
G NT5M 5',3'-nucleotidase, mitochondrial IEA InterPro GO_REF:0000002 NCBI chr 5:42,080,654...42,117,919
Ensembl chr 5:42,080,645...42,117,741
JBrowse link
G SAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 ISO (PMID:23601106), (PMID:26294762) UniProtKB PMID:23601106, PMID:26294762 NCBI chr24:25,623,997...25,676,336
Ensembl chr24:25,626,134...25,680,902
JBrowse link
G STRAP serine/threonine kinase receptor associated protein IEA InterPro GO_REF:0000002 NCBI chr27:30,800,853...30,817,578
Ensembl chr27:30,675,247...30,817,388
JBrowse link
dGDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT18 nudix hydrolase 18 IEA Ensembl GO_REF:0000107 NCBI chr25:35,139,580...35,144,066
Ensembl chr25:35,140,969...35,143,063
JBrowse link
dGTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT1 nudix hydrolase 1 IEA Ensembl GO_REF:0000107 NCBI chr 6:14,874,459...14,881,517
Ensembl chr 6:14,859,518...14,882,704
JBrowse link
G NUDT15 nudix hydrolase 15 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr22:3,416,702...3,424,607
Ensembl chr22:3,416,578...3,424,409
JBrowse link
G SAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr24:25,623,997...25,676,336
Ensembl chr24:25,626,134...25,680,902
JBrowse link
diadenosine hexaphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC491890 diphosphoinositol polyphosphate phosphohydrolase 3-beta IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:44,061,199...44,068,750 JBrowse link
G NUDT11 nudix hydrolase 11 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:43,916,315...43,923,410 JBrowse link
G NUDT3 nudix hydrolase 3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:3,559,347...3,687,026
Ensembl chr12:3,567,206...3,687,026
JBrowse link
G NUDT4 nudix hydrolase 4 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:33,627,441...33,644,350
Ensembl chr15:33,627,846...33,641,795
JBrowse link
diadenosine pentaphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC491890 diphosphoinositol polyphosphate phosphohydrolase 3-beta IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:44,061,199...44,068,750 JBrowse link
G NUDT11 nudix hydrolase 11 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:43,916,315...43,923,410 JBrowse link
G NUDT3 nudix hydrolase 3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:3,559,347...3,687,026
Ensembl chr12:3,567,206...3,687,026
JBrowse link
G NUDT4 nudix hydrolase 4 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:33,627,441...33,644,350
Ensembl chr15:33,627,846...33,641,795
JBrowse link
diadenosine triphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FHIT fragile histidine triad diadenosine triphosphatase ISO RGD PMID:16359767 RGD:2289929 NCBI chr20:29,735,380...31,113,859
Ensembl chr20:30,356,572...31,113,859
JBrowse link
dITP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT16 nudix hydrolase 16 ISO (MGI:MGI:5009783|PMID:20081199) MGI PMID:20081199 MGI:MGI:5009783 NCBI chr23:28,498,730...28,500,998
Ensembl chr23:28,498,652...28,499,998
JBrowse link
dTTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCTPP1 dCTP pyrophosphatase 1 NOT ISO (PMID:24467396) UniProtKB PMID:24467396 NCBI chr 6:17,679,681...17,683,644
Ensembl chr 6:17,679,722...17,683,570
JBrowse link
dUMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NT5M 5',3'-nucleotidase, mitochondrial IEA Ensembl GO_REF:0000107 NCBI chr 5:42,080,654...42,117,919
Ensembl chr 5:42,080,645...42,117,741
JBrowse link
dUTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DUT deoxyuridine triphosphatase IBA
IEA
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000104 NCBI chr30:14,572,766...14,585,621
Ensembl chr30:14,572,602...14,585,530
JBrowse link
flavin adenine dinucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G VCP valosin containing protein IEA Ensembl GO_REF:0000107 NCBI chr11:51,636,986...51,651,749
Ensembl chr11:51,637,411...51,651,714
JBrowse link
GDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GUK1 guanylate kinase 1 ISO RGD PMID:4307347 RGD:5147877 NCBI chr14:820,048...826,694
Ensembl chr14:820,093...827,250
JBrowse link
GDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT18 nudix hydrolase 18 IEA Ensembl GO_REF:0000107 NCBI chr25:35,139,580...35,144,066
Ensembl chr25:35,140,969...35,143,063
JBrowse link
GMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GMPS guanine monophosphate synthase IBA
IEA
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000041 NCBI chr23:49,569,571...49,645,999
Ensembl chr23:49,569,531...49,699,199
JBrowse link
G IMPDH1 inosine monophosphate dehydrogenase 1 IEA UniProt GO_REF:0000104 NCBI chr14:8,001,575...8,013,181
Ensembl chr14:7,996,717...8,012,467
JBrowse link
G IMPDH2 inosine monophosphate dehydrogenase 2 IEA UniProt GO_REF:0000104 NCBI chr20:40,136,106...40,140,983
Ensembl chr20:40,136,154...40,140,972
JBrowse link
GMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HPRT1 hypoxanthine phosphoribosyltransferase 1 ISS UniProtKB GO_REF:0000024 NCBI chr  X:105,115,732...105,153,702
Ensembl chr  X:105,115,732...105,153,702
JBrowse link
G PRTFDC1 phosphoribosyl transferase domain containing 1 NOT ISO (PMID:21054786) UniProtKB PMID:21054786 NCBI chr 2:8,551,008...8,643,710
Ensembl chr 2:8,559,319...8,642,533
JBrowse link
GMP salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HPRT1 hypoxanthine phosphoribosyltransferase 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:105,115,732...105,153,702
Ensembl chr  X:105,115,732...105,153,702
JBrowse link
GTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IMPDH1 inosine monophosphate dehydrogenase 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:8,001,575...8,013,181
Ensembl chr14:7,996,717...8,012,467
JBrowse link
G IMPDH2 inosine monophosphate dehydrogenase 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr20:40,136,106...40,140,983
Ensembl chr20:40,136,154...40,140,972
JBrowse link
G LOC483943 nucleoside diphosphate kinase A pseudogene IEA InterPro GO_REF:0000002 NCBI chr 1:10,046,217...10,046,745 JBrowse link
G NME1 non-metastatic cells 1, protein (NM23A) expressed in IEA InterPro GO_REF:0000002 NCBI chr 9:26,990,336...26,998,895
Ensembl chr 9:26,990,469...26,998,955
JBrowse link
G NME2 non-metastatic cells 2, protein (NM23B) expressed in IEA InterPro GO_REF:0000002 NCBI chr 9:27,002,114...27,005,740
Ensembl chr 9:27,001,733...27,015,934
JBrowse link
G NME4 NME/NM23 nucleoside diphosphate kinase 4 IEA InterPro GO_REF:0000002 NCBI chr 6:40,119,443...40,122,418 JBrowse link
G NME5 NME/NM23 family member 5 IEA InterPro GO_REF:0000002 NCBI chr11:25,772,162...25,792,856
Ensembl chr11:25,772,157...25,792,176
JBrowse link
G NME6 NME/NM23 nucleoside diphosphate kinase 6 IEA InterPro GO_REF:0000002 NCBI chr20:40,769,394...40,778,802
Ensembl chr20:40,769,501...40,776,496
JBrowse link
G NME7 NME/NM23 family member 7 IEA UniProt GO_REF:0000104 NCBI chr 7:29,201,273...29,464,072
Ensembl chr 7:29,206,307...29,463,467
JBrowse link
G NME9 NME/NM23 family member 9 IEA InterPro GO_REF:0000002 NCBI chr23:34,515,003...34,537,386
Ensembl chr23:34,483,520...34,537,312
JBrowse link
IDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT16 nudix hydrolase 16 ISO (PMID:20385596) UniProtKB PMID:20385596 NCBI chr23:28,498,730...28,500,998
Ensembl chr23:28,498,652...28,499,998
JBrowse link
G NUDT9 nudix hydrolase 9 IEA Ensembl GO_REF:0000107 NCBI chr32:10,862,532...10,887,162
Ensembl chr32:10,862,527...10,886,863
JBrowse link
inosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr24:32,083,786...32,119,810
Ensembl chr24:32,083,931...32,111,160
JBrowse link
G ADA2 adenosine deaminase 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr27:44,883,573...44,912,930
Ensembl chr27:44,884,882...44,912,850
JBrowse link
G ADAL adenosine deaminase like IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr30:10,191,019...10,214,089
Ensembl chr30:10,194,606...10,216,875
JBrowse link
G AK1 adenylate kinase 1 ISO RGD PMID:19049516 RGD:5134369 NCBI chr 9:55,539,179...55,548,132
Ensembl chr 9:55,539,260...55,548,132
JBrowse link
ITP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ITPA inosine triphosphatase ISO (MGI:MGI:5009783|PMID:20081199) MGI PMID:20081199 MGI:MGI:5009783 NCBI chr24:18,070,980...18,081,815
Ensembl chr24:18,064,983...18,082,163
JBrowse link
long-chain fatty-acyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACOT7 acyl-CoA thioesterase 7 IEA Ensembl GO_REF:0000107 NCBI chr 5:60,153,616...60,239,254
Ensembl chr 5:60,153,616...60,239,239
JBrowse link
malonyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MLYCD malonyl-CoA decarboxylase IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:68,385,058...68,399,965
Ensembl chr 5:68,384,618...68,399,965
JBrowse link
medium-chain fatty-acyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACOT7 acyl-CoA thioesterase 7 IEA Ensembl GO_REF:0000107 NCBI chr 5:60,153,616...60,239,254
Ensembl chr 5:60,153,616...60,239,239
JBrowse link
G NUDT7 nudix hydrolase 7 ISO (MGI:MGI:6450264|PMID:18799520) UniProt PMID:18799520 MGI:MGI:6450264 NCBI chr 5:73,515,819...73,527,780
Ensembl chr 5:73,516,166...73,527,716
JBrowse link
NAD catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT12 nudix hydrolase 12 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:7,693,903...7,708,930
Ensembl chr 3:7,696,505...7,724,769
JBrowse link
G NUDT17 nudix hydrolase 17 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:58,648,234...58,653,222
Ensembl chr17:58,648,272...58,650,757
JBrowse link
G SARM1 sterile alpha and TIR motif containing 1 IEA Ensembl GO_REF:0000107 NCBI chr 9:42,620,878...42,639,662
Ensembl chr 9:42,622,538...42,639,590
JBrowse link
G TIGD7 tigger transposable element derived 7 ISO (MGI:MGI:5426136|PMID:11011142) UniProtKB PMID:11011142 MGI:MGI:5426136 NCBI chr 6:37,931,461...37,937,102
Ensembl chr 6:37,934,889...37,936,535
JBrowse link
NADP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT12 nudix hydrolase 12 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:7,693,903...7,708,930
Ensembl chr 3:7,696,505...7,724,769
JBrowse link
G NUDT13 nudix hydrolase 13 IEA Ensembl GO_REF:0000107 NCBI chr 4:23,695,183...23,712,301
Ensembl chr 4:23,695,266...23,711,937
JBrowse link
G NUDT17 nudix hydrolase 17 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:58,648,234...58,653,222
Ensembl chr17:58,648,272...58,650,757
JBrowse link
nucleoside diphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENTPD3 ectonucleoside triphosphate diphosphohydrolase 3 IEA Ensembl GO_REF:0000107 NCBI chr23:9,858,328...9,891,244
Ensembl chr23:9,858,764...9,890,483
JBrowse link
nucleoside phosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT15 nudix hydrolase 15 ISO (PMID:26878724)
(PMID:26238318)
UniProtKB PMID:26238318, PMID:26878724 NCBI chr22:3,416,702...3,424,607
Ensembl chr22:3,416,578...3,424,409
JBrowse link
nucleoside triphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCTPP1 dCTP pyrophosphatase 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:17,679,681...17,683,644
Ensembl chr 6:17,679,722...17,683,570
JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:251,985...322,081
Ensembl chr 1:252,103...322,718
JBrowse link
G ENPP3 ectonucleotide pyrophosphatase/phosphodiesterase 3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:97,426...195,939
Ensembl chr12:97,483...182,082
JBrowse link
G ENTPD3 ectonucleoside triphosphate diphosphohydrolase 3 IEA Ensembl GO_REF:0000107 NCBI chr23:9,858,328...9,891,244
Ensembl chr23:9,858,764...9,890,483
JBrowse link
G ITPA inosine triphosphatase IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr24:18,070,980...18,081,815
Ensembl chr24:18,064,983...18,082,163
JBrowse link
G SMPDL3A sphingomyelin phosphodiesterase acid like 3A IEA Ensembl GO_REF:0000107 NCBI chr 1:62,091,947...62,110,081
Ensembl chr 1:62,092,121...62,109,773
JBrowse link
propionyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT7 nudix hydrolase 7 ISO (MGI:MGI:6450264|PMID:18799520) UniProt PMID:18799520 MGI:MGI:6450264 NCBI chr 5:73,515,819...73,527,780
Ensembl chr 5:73,516,166...73,527,716
JBrowse link
purine deoxyribonucleoside triphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT15 nudix hydrolase 15 ISO (MGI:MGI:2663996|PMID:12767940) MGI PMID:12767940 MGI:MGI:2663996 NCBI chr22:3,416,702...3,424,607
Ensembl chr22:3,416,578...3,424,409
JBrowse link
purine nucleoside monophosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NT5C1A 5'-nucleotidase, cytosolic IA IEA Ensembl GO_REF:0000107 NCBI chr15:3,209,771...3,230,104
Ensembl chr15:3,209,869...3,222,983
JBrowse link
purine nucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT1 nudix hydrolase 1 ISO (PMID:10608900) UniProtKB PMID:10608900 NCBI chr 6:14,874,459...14,881,517
Ensembl chr 6:14,859,518...14,882,704
JBrowse link
G NUDT15 nudix hydrolase 15 ISO (PMID:26878724) UniProtKB PMID:26878724 NCBI chr22:3,416,702...3,424,607
Ensembl chr22:3,416,578...3,424,409
JBrowse link
purine ribonucleoside diphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENTPD1 ectonucleoside triphosphate diphosphohydrolase 1 ISO (MGI:MGI:2178511|PMID:11929769) MGI PMID:11929769 MGI:MGI:2178511 NCBI chr28:9,181,851...9,311,835
Ensembl chr28:9,211,050...9,323,939
JBrowse link
G ENTPD2 ectonucleoside triphosphate diphosphohydrolase 2 IEA Ensembl GO_REF:0000107 NCBI chr 9:48,589,408...48,594,852
Ensembl chr 9:48,570,891...48,594,452
JBrowse link
purine ribonucleoside salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADK adenosine kinase IEA Ensembl
UniProt
GO_REF:0000043, GO_REF:0000107 NCBI chr 4:24,540,626...25,047,032
Ensembl chr 4:24,540,659...25,046,464
JBrowse link
G APRT adenine phosphoribosyltransferase IEA Ensembl GO_REF:0000107 NCBI chr 5:64,563,154...64,565,537
Ensembl chr 5:64,563,192...64,565,445
JBrowse link
G HPRT1 hypoxanthine phosphoribosyltransferase 1 ISS
IEA
IBA
(PMID:21873635) UniProtKB
UniProt
GO_Central
PMID:21873635 GO_REF:0000024, GO_REF:0000043 NCBI chr  X:105,115,732...105,153,702
Ensembl chr  X:105,115,732...105,153,702
JBrowse link
G LOC102156635 hypoxanthine phosphoribosyltransferase 1 pseudogene IEA UniProt GO_REF:0000043 NCBI chr 9:57,843,785...57,844,773 JBrowse link
G MTAP methylthioadenosine phosphorylase IEA UniProt GO_REF:0000043 NCBI chr11:41,148,389...41,200,635
Ensembl chr11:41,148,404...41,264,504
JBrowse link
G PRTFDC1 phosphoribosyl transferase domain containing 1 IEA UniProt GO_REF:0000043 NCBI chr 2:8,551,008...8,643,710
Ensembl chr 2:8,559,319...8,642,533
JBrowse link
purine ribonucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HINT1 histidine triad nucleotide binding protein 1 ISO (PMID:16835243) UniProtKB PMID:16835243 NCBI chr11:19,551,057...19,555,390 JBrowse link
pyrimidine deoxyribonucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NT5C 5', 3'-nucleotidase, cytosolic IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:5,342,793...5,344,432
Ensembl chr 9:5,343,378...5,344,380
JBrowse link
G NT5M 5',3'-nucleotidase, mitochondrial IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:42,080,654...42,117,919
Ensembl chr 5:42,080,645...42,117,741
JBrowse link
ribonucleoside diphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT5 nudix hydrolase 5 IEA Ensembl GO_REF:0000107 NCBI chr 2:24,239,632...24,266,763
Ensembl chr 2:24,239,627...24,264,469
JBrowse link
S-adenosylmethioninamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMD1 adenosylmethionine decarboxylase 1 IEA UniProt GO_REF:0000041 NCBI chr12:67,432,871...67,453,791
Ensembl chr12:67,448,141...67,451,696
JBrowse link
thymidine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC609048 dihydrofolate reductase ISO (PMID:21876188) UniProtKB PMID:21876188 NCBI chr19:16,731,187...16,731,854 JBrowse link
UDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENTPD4 ectonucleoside triphosphate diphosphohydrolase 4 IEA Ensembl GO_REF:0000107 NCBI chr25:34,032,104...34,067,772
Ensembl chr25:34,032,055...34,063,281
JBrowse link
very long-chain fatty-acyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCD1 ATP binding cassette subfamily D member 1 IEA Ensembl GO_REF:0000107 NCBI chr  X:121,545,690...121,564,117
Ensembl chr  X:121,545,586...121,563,186
JBrowse link
XDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT16 nudix hydrolase 16 ISO (PMID:20385596) UniProtKB PMID:20385596 NCBI chr23:28,498,730...28,500,998
Ensembl chr23:28,498,652...28,499,998
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16162
    metabolic process 10637
      small molecule metabolic process 1674
        small molecule biosynthetic process 588
          nucleobase-containing small molecule biosynthetic process 76
            nucleoside biosynthetic process + 25
            nucleoside phosphate catabolic process + 55
Path 2
Term Annotations click to browse term
  biological_process 16162
    metabolic process 10637
      cellular metabolic process 9630
        cellular aromatic compound metabolic process 5109
          nucleobase-containing compound metabolic process 4907
            nucleobase-containing compound biosynthetic process 3549
              nucleobase-containing small molecule biosynthetic process 76
                nucleoside biosynthetic process + 25
                nucleoside phosphate catabolic process + 55
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.