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ONTOLOGY REPORT - ANNOTATIONS


Term:telomere localization
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Accession:GO:0034397 term browser browse the term
Definition:Any process in which a telomere is transported to, and/or maintained in, a specific location.
Synonyms:exact_synonym: telomere localisation



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telomere localization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kash5 KASH domain containing 5 involved_in ISO
IBA
(MGI:5706878|PMID:25892231)
GO_REF:0000033
RGD
GO_Central
PMID:25892231 GO_REF:0000033 MGI:5706878 NCBI chr 1:95,668,918...95,691,353
Ensembl chr 1:95,668,886...95,691,368
JBrowse link
meiotic attachment of telomere to nuclear envelope term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Majin membrane anchored junction protein involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
IBA
GO_REF:0000024
(MGI:5704279|PMID:26548954)
GO_REF:0000118
GO_REF:0000033
MGI:1921651 (PMID:30718482)
UniProt
RGD
TreeGrafter
GO_Central
PMID:26548954 PMID:30718482 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 MGI:5704279 NCBI chr 1:203,487,777...203,524,098
Ensembl chr 1:203,488,069...203,524,092
JBrowse link
G Rad21l1 RAD21 cohesin complex component like 1 acts_upstream_of_or_within ISO MGI:5292341 (PMID:21743440) RGD PMID:21743440 NCBI chr 3:140,160,128...140,188,324
Ensembl chr 3:140,160,118...140,188,298
JBrowse link
G Spdya speedy/RINGO cell cycle regulator family member A acts_upstream_of_or_within ISO MGI:5888863 (PMID:28031483) RGD PMID:28031483 NCBI chr 6:23,905,574...23,954,926
Ensembl chr 6:23,910,223...23,954,850
JBrowse link
G Sun1 Sad1 and UNC84 domain containing 1 involved_in
acts_upstream_of_or_within
ISO (MGI:5573020|PMID:24586178)
MGI:6362937 (PMID:30718482)
RGD PMID:24586178 PMID:30718482 MGI:5573020 NCBI chr12:15,396,378...15,441,277
Ensembl chr12:15,396,381...15,441,571
JBrowse link
G Terb1 telomere repeat binding bouquet formation protein 1 involved_in
acts_upstream_of_or_within
ISO
IBA
(MGI:5545837|PMID:24413433), (MGI:5704279|PMID:26548954)
GO_REF:0000033
MGI:1921651 (PMID:30718482)
RGD
GO_Central
PMID:24413433 PMID:26548954 PMID:30718482 GO_REF:0000033 MGI:5545837 MGI:5704279 NCBI chr19:473,720...528,069
Ensembl chr19:473,218...528,084
JBrowse link
G Terb2 telomere repeat binding bouquet formation protein 2 involved_in
acts_upstream_of_or_within
ISO
IBA
(MGI:5704279|PMID:26548954)
GO_REF:0000033
MGI:1923913|MGI:2443187|MGI:6362934|MGI:6362936 (PMID:30718482)
RGD
GO_Central
PMID:26548954 PMID:30718482 GO_REF:0000033 MGI:5704279 NCBI chr 3:109,138,343...109,156,700
Ensembl chr 3:109,138,343...109,156,683
JBrowse link
meiotic telomere clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase acts_upstream_of_or_within ISO MGI:1857132 (PMID:17010969) RGD PMID:17010969 NCBI chr 8:53,828,741...53,932,773
Ensembl chr 8:53,831,093...53,932,437
JBrowse link
G Cep63 centrosomal protein 63 acts_upstream_of_or_within ISO MGI:4377328 (PMID:26158450) RGD PMID:26158450 NCBI chr 8:103,162,639...103,214,177
Ensembl chr 8:103,162,700...103,214,177
JBrowse link
G Kash5 KASH domain containing 5 acts_upstream_of_or_within ISO GO:0030286 (PMID:24062341) RGD PMID:24062341 NCBI chr 1:95,668,918...95,691,353
Ensembl chr 1:95,668,886...95,691,368
JBrowse link
G Majin membrane anchored junction protein involved_in ISS
ISO
GO_REF:0000024
(MGI:5704279|PMID:26548954)
UniProt
RGD
PMID:26548954 GO_REF:0000024 MGI:5704279 NCBI chr 1:203,487,777...203,524,098
Ensembl chr 1:203,488,069...203,524,092
JBrowse link
G Mei1 meiotic double-stranded break formation protein 1 acts_upstream_of_or_within ISO MGI:2176973 (PMID:17010969) RGD PMID:17010969 NCBI chr 7:113,590,142...113,643,513
Ensembl chr 7:113,590,142...113,643,511
JBrowse link
G Mlh1 mutL homolog 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1858054 (PMID:17010969)
Ensembl
RGD
PMID:17010969 GO_REF:0000107 NCBI chr 8:111,196,468...111,233,721
Ensembl chr 8:111,196,468...111,233,617
JBrowse link
G Spo11 SPO11 initiator of meiotic double strand breaks acts_upstream_of_or_within ISO MGI:2178805 (PMID:17010969) RGD PMID:17010969 NCBI chr 3:161,755,299...161,770,930
Ensembl chr 3:161,757,519...161,770,925
JBrowse link
G Terb1 telomere repeat binding bouquet formation protein 1 involved_in ISO (MGI:5545837|PMID:24413433), (MGI:5704279|PMID:26548954) RGD PMID:24413433 PMID:26548954 MGI:5545837 MGI:5704279 NCBI chr19:473,720...528,069
Ensembl chr19:473,218...528,084
JBrowse link
G Terb2 telomere repeat binding bouquet formation protein 2 involved_in ISO (MGI:5704279|PMID:26548954) RGD PMID:26548954 MGI:5704279 NCBI chr 3:109,138,343...109,156,700
Ensembl chr 3:109,138,343...109,156,683
JBrowse link
G Terf1 telomeric repeat binding factor 1 acts_upstream_of_or_within ISO MGI:2677837 (PMID:17010969) RGD PMID:17010969 NCBI chr 5:3,443,103...3,472,377
Ensembl chr 5:3,443,106...3,472,340
JBrowse link
G Ube2b ubiquitin-conjugating enzyme E2B acts_upstream_of_or_within ISO MGI:2183933 (PMID:17010969) RGD PMID:17010969 NCBI chr10:36,248,434...36,263,379
Ensembl chr10:36,248,438...36,264,665
JBrowse link
telomere tethering at nuclear periphery term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nup98 nucleoporin 98 and 96 precursor involved_in IEA
IBA
GO_REF:0000118
GO_REF:0000033
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr 1:156,494,423...156,591,415
Ensembl chr 1:156,494,423...156,591,415
JBrowse link

Term paths to the root
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Term Annotations click to browse term
  biological_process 20413
    localization 5751
      organelle localization 650
        chromosome localization 118
          telomere localization 15
            interphase mitotic telomere clustering + 0
            meiotic telomere clustering + 14
            mitotic telomere clustering and tethering at nuclear periphery + 0
            telomere tethering at nuclear periphery + 7
paths to the root