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ONTOLOGY REPORT - ANNOTATIONS


Term:lipid droplet organization
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Accession:GO:0034389 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a lipid particle.
Synonyms:exact_synonym: adiposome organization;   lipid body organization;   lipid particle organisation;   lipid particle organization
 related_synonym: lipid particle organization and biogenesis



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lipid droplet organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aup1 AUP1, lipid droplet regulating VLDL assembly factor involved_in ISO
ISS
(PMID:24039768)
GO_REF:0000024
RGD
UniProt
PMID:24039768 GO_REF:0000024 NCBI chr 4:115,560,274...115,563,346
Ensembl chr 4:115,560,261...115,563,346
JBrowse link
G Bscl2 BSCL2 lipid droplet biogenesis associated, seipin involved_in
acts_upstream_of_or_within
IBA
ISO
ISS
PMID:21873635
MGI:5014325 (MGI:5573095|PMID:24778225)
MGI:5014325 (MGI:5904930|PMID:27806294)
GO_REF:0000024
(PMID:19278620)
RGD
UniProt
PMID:19278620 PMID:24778225 PMID:27806294 PMID:21873635 GO_REF:0000024 MGI:5573095 MGI:5904930, RGD:13792537 NCBI chr 1:205,731,814...205,743,430
Ensembl chr 1:205,733,872...205,743,421
JBrowse link
G Cidec cell death-inducing DFFA-like effector c involved_in ISO (PMID:20049731) RGD PMID:20049731 NCBI chr 4:146,569,288...146,582,173
Ensembl chr 4:146,569,289...146,582,173
JBrowse link
G Ddhd2 DDHD domain containing 2 acts_upstream_of_or_within
involved_in
ISO MGI:5662251 (MGI:5608822|PMID:25267624) RGD PMID:25267624 MGI:5608822 NCBI chr16:66,319,469...66,349,025
Ensembl chr16:66,319,466...66,349,023
JBrowse link
G Faf2 Fas associated factor family member 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:23297223)
GO_REF:0000107
RGD
Ensembl
PMID:23297223 GO_REF:0000107 NCBI chr17:9,947,216...9,989,474
Ensembl chr17:9,947,220...9,989,485
JBrowse link
G Fitm1 fat storage-inducing transmembrane protein 1 involved_in IBA
ISO
PMID:21873635
(MGI:3772596|PMID:18160536)
RGD PMID:18160536 PMID:21873635 MGI:3772596, RGD:13792537 NCBI chr15:29,064,746...29,066,015
Ensembl chr15:29,064,707...29,066,015
JBrowse link
G Fitm2 fat storage-inducing transmembrane protein 2 involved_in ISS
ISO
IBA
GO_REF:0000024
(MGI:3772596|PMID:18160536), (MGI:4943823|PMID:20520733)
PMID:21873635
UniProt
RGD
PMID:18160536 PMID:20520733 PMID:21873635 GO_REF:0000024 MGI:3772596 MGI:4943823, RGD:13792537 NCBI chr 3:152,141,346...152,147,858
Ensembl chr 3:152,141,346...152,147,858
JBrowse link
G Plin5 perilipin 5 involved_in ISS
ISO
GO_REF:0000024
(MGI:5440401|PMID:22532565)
UniProt
RGD
PMID:22532565 GO_REF:0000024 MGI:5440401 NCBI chr 9:939,745...946,188
Ensembl chr 9:939,747...946,120
JBrowse link
G Pnpla2 patatin-like phospholipase domain containing 2 acts_upstream_of_or_within ISO (MGI:5469243|PMID:23297223) RGD PMID:23297223 MGI:5469243 NCBI chr 1:196,552,723...196,557,805
Ensembl chr 1:196,552,723...196,557,805
JBrowse link
G Pnpla3 patatin-like phospholipase domain containing 3 involved_in ISO (PMID:23398201) RGD PMID:23398201 NCBI chr 7:115,293,538...115,314,077
Ensembl chr 7:115,293,538...115,314,077
JBrowse link
G Ppia peptidylprolyl isomerase A involved_in ISO (PMID:21711559) RGD PMID:21711559 NCBI chr14:81,279,292...81,282,960
Ensembl chr14:81,275,091...81,299,601
JBrowse link
G Ppid peptidylprolyl isomerase D involved_in ISS
ISO
GO_REF:0000024
(PMID:21711559)
UniProt
RGD
PMID:21711559 GO_REF:0000024 NCBI chr 2:164,727,803...164,740,168
Ensembl chr 2:164,727,779...164,740,221
JBrowse link
G Ptgfrn prostaglandin F2 receptor inhibitor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:1261692|PMID:9643346)
Ensembl
RGD
PMID:9643346 GO_REF:0000107 MGI:1261692 NCBI chr 2:188,469,521...188,544,795
Ensembl chr 2:188,469,521...188,544,795
JBrowse link
G Rab18 RAB18, member RAS oncogene family involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(PMID:24239381)
RGD PMID:24239381 PMID:21873635 RGD:13792537 NCBI chr17:54,944,099...54,976,093
Ensembl chr17:54,943,955...54,976,043
JBrowse link
G Rab3gap1 RAB3 GTPase activating protein catalytic subunit 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(PMID:24239381)
ParkinsonsUK-UCL
RGD
PMID:24239381 GO_REF:0000024 NCBI chr13:39,355,698...39,429,154
Ensembl chr13:39,352,247...39,429,169
JBrowse link
G Spart spartin acts_upstream_of_or_within ISO MGI:5430946 (MGI:5430704|PMID:22619377) RGD PMID:22619377 MGI:5430704 NCBI chr 2:139,292,630...139,319,248
Ensembl chr 2:139,292,355...139,319,248
JBrowse link
G Tbc1d20 TBC1 domain family, member 20 acts_upstream_of_or_within ISO MGI:1856684 (MGI:5551670|PMID:24239381) RGD PMID:24239381 MGI:5551670 NCBI chr 3:140,768,537...140,787,010
Ensembl chr 3:140,768,537...140,785,121
JBrowse link
G Tspo2 translocator protein 2 involved_in ISO (PMID:32358067)
(MGI:6450299|PMID:32358067)
RGD PMID:32358067 MGI:6450299 NCBI chr 9:12,544,615...12,548,563
Ensembl chr 9:12,545,015...12,548,573
JBrowse link
lipid droplet disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chka choline kinase alpha acts_upstream_of_positive_effect ISS
ISO
GO_REF:0000024
(PMID:34077757)
UniProt
RGD
PMID:34077757 GO_REF:0000024 NCBI chr 1:201,076,804...201,125,517
Ensembl chr 1:201,076,860...201,125,516
JBrowse link
G Kat5 lysine acetyltransferase 5 acts_upstream_of_positive_effect ISS
ISO
GO_REF:0000024
(PMID:34077757)
UniProt
RGD
PMID:34077757 GO_REF:0000024 NCBI chr 1:202,895,751...202,903,178
Ensembl chr 1:202,895,751...202,903,458
JBrowse link
G Plin2 perilipin 2 involved_in ISO (PMID:34077757) RGD PMID:34077757 NCBI chr 5:101,156,643...101,211,738
Ensembl chr 5:101,154,411...101,242,319
JBrowse link
G Plin3 perilipin 3 involved_in ISO (PMID:34077757) RGD PMID:34077757 NCBI chr 9:1,111,178...1,123,117
Ensembl chr 9:1,102,366...1,123,147
JBrowse link
G Pnpla2 patatin-like phospholipase domain containing 2 involved_in ISO (PMID:16239926) RGD PMID:16239926 NCBI chr 1:196,552,723...196,557,805
Ensembl chr 1:196,552,723...196,557,805
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 acts_upstream_of_positive_effect ISS
ISO
GO_REF:0000024
(PMID:34077757)
UniProt
RGD
PMID:34077757 GO_REF:0000024 NCBI chr 2:54,240,298...54,275,978
Ensembl chr 2:54,240,137...54,275,978
JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 acts_upstream_of_positive_effect
involved_in
ISS
ISO
IEA
GO_REF:0000024
(PMID:34077757)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:34077757 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:119,807,992...119,879,987
Ensembl chr 5:119,813,226...119,879,543
JBrowse link
lipid droplet formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aup1 AUP1, lipid droplet regulating VLDL assembly factor involved_in ISS
ISO
GO_REF:0000024
(PMID:21857022)
UniProt
RGD
PMID:21857022 GO_REF:0000024 NCBI chr 4:115,560,274...115,563,346
Ensembl chr 4:115,560,261...115,563,346
JBrowse link
G Bscl2 BSCL2 lipid droplet biogenesis associated, seipin involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000117
(MGI:5495583|PMID:23458123)
(PMID:27564575), (PMID:27879284), (PMID:31178403), (PMID:31708432)
UniProt
RGD
PMID:23458123 PMID:27564575 PMID:27879284 PMID:31178403 PMID:31708432 GO_REF:0000024 GO_REF:0000117 MGI:5495583 NCBI chr 1:205,731,814...205,743,430
Ensembl chr 1:205,733,872...205,743,421
JBrowse link
G Cds1 CDP-diacylglycerol synthase 1 involved_in ISO
ISS
(PMID:26946540), (PMID:31548309)
(MGI:6393010|PMID:26946540)
GO_REF:0000024
RGD
UniProt
PMID:26946540 PMID:31548309 GO_REF:0000024 MGI:6393010 NCBI chr14:7,820,328...7,882,943
Ensembl chr14:7,820,351...7,882,681
JBrowse link
G Cds2 CDP-diacylglycerol synthase 2 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:6393010|PMID:26946540)
GO_REF:0000107
(PMID:26946540), (PMID:31548309)
UniProt
RGD
Ensembl
PMID:26946540 PMID:31548309 GO_REF:0000024 GO_REF:0000107 MGI:6393010 NCBI chr 3:119,514,963...119,553,555
Ensembl chr 3:119,515,000...119,553,541
JBrowse link
G Fitm1 fat storage-inducing transmembrane protein 1 involved_in ISO (MGI:6478052|PMID:22106267) RGD PMID:22106267 MGI:6478052 NCBI chr15:29,064,746...29,066,015
Ensembl chr15:29,064,707...29,066,015
JBrowse link
G Fitm2 fat storage-inducing transmembrane protein 2 involved_in ISO (PMID:32915949)
(MGI:5763334|PMID:26504167), (MGI:6478052|PMID:22106267)
RGD PMID:22106267 PMID:26504167 PMID:32915949 MGI:5763334 MGI:6478052 NCBI chr 3:152,141,346...152,147,858
Ensembl chr 3:152,141,346...152,147,858
JBrowse link
G Ldaf1 lipid droplet assembly factor 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:31708432)
UniProt
Ensembl
RGD
PMID:31708432 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:174,484,438...174,503,037
Ensembl chr 1:174,484,447...174,503,036
JBrowse link
G Pisd phosphatidylserine decarboxylase involved_in ISO
ISS
(PMID:33593792)
GO_REF:0000024
RGD
UniProt
PMID:33593792 GO_REF:0000024 NCBI chr14:77,941,927...77,991,021
Ensembl chr14:77,941,948...77,991,003
JBrowse link
G Pla2g4c phospholipase A2 group IVC involved_in ISO (PMID:28336330) RGD PMID:28336330 NCBI chr 1:74,249,688...74,272,133
Ensembl chr 1:74,236,211...74,274,656
JBrowse link
G Rnf213 ring finger protein 213 involved_in ISO (PMID:30705059) RGD PMID:30705059 NCBI chr10:104,656,329...104,755,669
Ensembl chr10:104,656,883...104,757,918
JBrowse link
G Smim22 small integral membrane protein 22 involved_in ISO (PMID:29765154) RGD PMID:29765154 NCBI chr10:10,572,146...10,574,339 JBrowse link
G Sqle squalene epoxidase involved_in ISO
ISS
(PMID:29765154)
GO_REF:0000024
RGD
UniProt
PMID:29765154 GO_REF:0000024 NCBI chr 7:90,867,973...90,883,623
Ensembl chr 7:90,868,011...90,883,618
JBrowse link
G Zfyve1 zinc finger FYVE-type containing 1 involved_in ISO
IBA
(PMID:30970241)
PMID:21873635
(MGI:6392989|PMID:30970241)
RGD PMID:30970241 PMID:21873635 MGI:6392989, RGD:13792537 NCBI chr 6:103,184,938...103,234,111
Ensembl chr 6:103,184,938...103,234,039
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20091
    cellular process 18675
      cellular component organization or biogenesis 6788
        cellular component organization 6542
          organelle organization 3671
            lipid droplet organization 33
              lipid droplet disassembly 7
              lipid droplet formation 13
paths to the root