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ONTOLOGY REPORT - ANNOTATIONS


Term:high-density lipoprotein particle clearance
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Accession:GO:0034384 term browser browse the term
Definition:The process in which a high-density lipoprotein particle is removed from the blood via receptor-mediated endocytosis and its constituent parts degraded.
Synonyms:exact_synonym: HDL clearance


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high-density lipoprotein particle clearance term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa2 apolipoprotein A2 ISO (PMID:10764676) RGD PMID:10764676 NCBI chr13:89,596,872...89,598,805
Ensembl chr13:89,597,138...89,598,802
JBrowse link
G Apoc2 apolipoprotein C2 ISO
IBA
(PMID:15778093)
PMID:21873635
RGD PMID:15778093, PMID:21873635 RGD:13792537 NCBI chr 1:80,589,023...80,593,991
Ensembl chr 1:80,589,023...80,594,136
JBrowse link
G Apoe apolipoprotein E ISO
IEA
(PMID:210175)
GO_REF:0000107
RGD
Ensembl
PMID:210175 GO_REF:0000107 NCBI chr 1:80,612,894...80,616,820
Ensembl chr 1:80,612,895...80,617,057
JBrowse link
G Apom apolipoprotein M ISO
IBA
(MGI:3575626|PMID:15793583)
PMID:21873635
RGD PMID:15793583, PMID:21873635 MGI:3575626, RGD:13792537 NCBI chr20:5,120,473...5,123,073
Ensembl chr20:5,120,474...5,123,073
JBrowse link
G Ldlr low density lipoprotein receptor IEA
ISO
GO_REF:0000107
RNAcentral:URS0000070CD2_10090 (MGI:5896906|PMID:25524771)
Ensembl
RGD
PMID:25524771 GO_REF:0000107 MGI:5896906 NCBI chr 8:22,750,425...22,773,305
Ensembl chr 8:22,750,336...22,774,903
JBrowse link
G Scarb1 scavenger receptor class B, member 1 ISO
ISS
(PMID:9211901)
GO_REF:0000024
RGD
BHF-UCL
PMID:9211901 GO_REF:0000024 NCBI chr12:36,694,952...36,761,445
Ensembl chr12:36,694,960...36,761,455
JBrowse link
negative regulation of high-density lipoprotein particle clearance term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoc3 apolipoprotein C3 ISO
IBA
(PMID:15778093)
PMID:21873635
RGD PMID:15778093, PMID:21873635 RGD:13792537 NCBI chr 8:50,529,318...50,531,498
Ensembl chr 8:50,529,318...50,531,498
JBrowse link
positive regulation of high-density lipoprotein particle clearance term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpld1 glycosylphosphatidylinositol specific phospholipase D1 ISS
ISO
GO_REF:0000024
(MGI:3617276|PMID:16219662)
UniProt
RGD
PMID:16219662 GO_REF:0000024 MGI:3617276 NCBI chr17:42,085,027...42,131,344
Ensembl chr17:42,085,028...42,127,678
JBrowse link
G Lipg lipase G, endothelial type ISO (PMID:19136670) RGD PMID:19136670 NCBI chr18:70,903,528...70,924,434
Ensembl chr18:70,901,710...70,924,708
JBrowse link

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