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ONTOLOGY REPORT - ANNOTATIONS


Term:plasma lipoprotein particle clearance
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Accession:GO:0034381 term browser browse the term
Definition:The process in which a lipoprotein particle is removed from the blood via receptor-mediated endocytosis and its constituent parts degraded.
Synonyms:exact_synonym: lipoprotein particle clearance


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plasma lipoprotein particle clearance term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd36 CD36 molecule ISO (MGI:2447499|PMID:12376530) BHF-UCL PMID:12376530 MGI:2447499 NCBI chrNW_004936810:791,823...838,303 JBrowse link
G Ldlr low density lipoprotein receptor ISO (MGI:5902678|PMID:22383525) ARUK-UCL PMID:22383525 MGI:5902678 NCBI chrNW_004936659:1,259,405...1,300,545 JBrowse link
G Msr1 macrophage scavenger receptor 1 ISO (MGI:2447499|PMID:12376530) BHF-UCL PMID:12376530 MGI:2447499 NCBI chrNW_004936573:5,345,282...5,391,946 JBrowse link
chylomicron remnant clearance term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoc1 apolipoprotein C1 ISO (PMID:4020294) BHF-UCL PMID:4020294 NCBI chrNW_004936706:1,519,248...1,520,102 JBrowse link
G Apoc2 apolipoprotein C2 ISO (PMID:4020294) BHF-UCL PMID:4020294 NCBI chrNW_004936706:1,531,219...1,531,921 JBrowse link
G Apoc3 apolipoprotein C3 ISO (PMID:4020294) BHF-UCL PMID:4020294 NCBI chrNW_004936542:2,106,927...2,108,412 JBrowse link
G Apoe apolipoprotein E ISO (PMID:7175379)
(PMID:1911868)
BHF-UCL
UniProt
PMID:1911868 PMID:7175379 NCBI chrNW_004936706:1,512,438...1,516,805 JBrowse link
G Lipc lipase C, hepatic type ISO RGD PMID:8192680 RGD:2308768 NCBI chrNW_004936471:19,604,083...19,733,721 JBrowse link
G Lmf1 lipase maturation factor 1 ISO (MGI:55554|PMID:6857276) MGI PMID:6857276 MGI:55554 NCBI chrNW_004936501:138,470...200,120 JBrowse link
high-density lipoprotein particle clearance term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa2 apolipoprotein A2 ISO (PMID:10764676) BHF-UCL PMID:10764676 NCBI chrNW_004936903:520,420...521,726 JBrowse link
G Apoc2 apolipoprotein C2 ISO (PMID:15778093) BHF-UCL PMID:15778093 NCBI chrNW_004936706:1,531,219...1,531,921 JBrowse link
G Apoe apolipoprotein E ISO (PMID:210175) BHF-UCL PMID:210175 NCBI chrNW_004936706:1,512,438...1,516,805 JBrowse link
G Apom apolipoprotein M ISO (MGI:3575626|PMID:15793583) BHF-UCL PMID:15793583 MGI:3575626 NCBI chrNW_004936727:1,868,751...1,874,347 JBrowse link
G Ldlr low density lipoprotein receptor ISO (MGI:5896906|PMID:25524771) BHF-UCL PMID:25524771 MGI:5896906 NCBI chrNW_004936659:1,259,405...1,300,545 JBrowse link
G Scarb1 scavenger receptor class B member 1 ISO (PMID:9211901) BHF-UCL PMID:9211901 NCBI chrNW_004936558:530,828...555,098 JBrowse link
intermediate-density lipoprotein particle clearance term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E ISO (PMID:1917954) UniProt PMID:1917954 NCBI chrNW_004936706:1,512,438...1,516,805 JBrowse link
low-density lipoprotein particle clearance term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adipoq adiponectin, C1Q and collagen domain containing ISO (PMID:11222466) BHF-UCL PMID:11222466 NCBI chrNW_004936578:3,168,599...3,179,369 JBrowse link
G Apob apolipoprotein B ISO (PMID:15797858), (PMID:2563166) BHF-UCL PMID:2563166 PMID:15797858 NCBI chrNW_004936493:10,509,118...10,549,144 JBrowse link
G Cd36 CD36 molecule ISO (PMID:10772654)
(MGI:3836139|PMID:10772654)
BHF-UCL PMID:10772654 MGI:3836139 NCBI chrNW_004936810:791,823...838,303 JBrowse link
G Commd1 copper metabolism domain containing 1 ISO (MGI:5806548|PMID:26965651) MGI PMID:26965651 MGI:5806548 NCBI chrNW_004936491:7,247,160...7,421,039 JBrowse link
G Dgat2 diacylglycerol O-acyltransferase 2 ISO (MGI:3784112|PMID:18175806) BHF-UCL PMID:18175806 MGI:3784112 NCBI chrNW_004936498:4,514,212...4,544,523 JBrowse link
G Ehd1 EH domain containing 1 ISO (MGI:3711403|PMID:17451652) BHF-UCL PMID:17451652 MGI:3711403 NCBI chrNW_004936599:4,451,207...4,473,078 JBrowse link
G Ldlr low density lipoprotein receptor ISO (PMID:17142622), (PMID:6299582)
(MGI:3784112|PMID:18175806)
(MGI:5806548|PMID:26965651)
BHF-UCL
MGI
PMID:6299582 PMID:17142622 PMID:18175806 PMID:26965651 MGI:3784112 MGI:5806548 NCBI chrNW_004936659:1,259,405...1,300,545 JBrowse link
G Ldlrap1 low density lipoprotein receptor adaptor protein 1 ISO (PMID:12417523), (PMID:12464675), (PMID:15166224) BHF-UCL PMID:12417523 PMID:12464675 PMID:15166224 NCBI chrNW_004936474:10,196,228...10,219,137 JBrowse link
G Lipc lipase C, hepatic type ISO RGD PMID:8071607 RGD:2308769 NCBI chrNW_004936471:19,604,083...19,733,721 JBrowse link
G Scarb1 scavenger receptor class B member 1 ISO (MGI:3784112|PMID:18175806) BHF-UCL PMID:18175806 MGI:3784112 NCBI chrNW_004936558:530,828...555,098 JBrowse link
G Washc1 WASH complex subunit 1 ISO (MGI:5806548|PMID:26965651) MGI PMID:26965651 MGI:5806548 NCBI chrNW_004936606:209,289...228,986 JBrowse link
negative regulation of high-density lipoprotein particle clearance term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoc3 apolipoprotein C3 ISO (PMID:15778093) BHF-UCL PMID:15778093 NCBI chrNW_004936542:2,106,927...2,108,412 JBrowse link
negative regulation of low-density lipoprotein particle clearance term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc8 ATP binding cassette subfamily C member 8 ISO RGD PMID:23828271 RGD:12792253 NCBI chrNW_004936528:1,608,782...1,682,873 JBrowse link
G Apoc3 apolipoprotein C3 ISO (PMID:15778093) BHF-UCL PMID:15778093 NCBI chrNW_004936542:2,106,927...2,108,412 JBrowse link
G Csk C-terminal Src kinase ISO RGD PMID:10884975 RGD:5134370 NCBI chrNW_004936471:33,757,778...33,777,871 JBrowse link
G Il19 interleukin 19 ISO (MGI:6102526|PMID:28257760) BHF-UCL PMID:28257760 MGI:6102526 NCBI chrNW_004936557:5,765,093...5,769,853 JBrowse link
G Khsrp KH-type splicing regulatory protein ISO (PMID:26523989) BHF-UCL PMID:26523989 NCBI chrNW_004936588:3,764,401...3,774,492 JBrowse link
G Mylip myosin regulatory light chain interacting protein ISO (MGI:3849777|PMID:19520913) BHF-UCL PMID:19520913 MGI:3849777 NCBI chrNW_004936552:2,325,161...2,341,356 JBrowse link
G Pcsk9 proprotein convertase subtilisin/kexin type 9 ISO (PMID:17328821), (PMID:22848640) BHF-UCL PMID:17328821 PMID:22848640 NCBI chrNW_004936522:6,271,339...6,300,202 JBrowse link
negative regulation of very-low-density lipoprotein particle clearance term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoc1 apolipoprotein C1 ISO (PMID:1917954) BHF-UCL PMID:1917954 NCBI chrNW_004936706:1,519,248...1,520,102 JBrowse link
G Apoc2 apolipoprotein C2 ISO (PMID:1917954) BHF-UCL PMID:1917954 NCBI chrNW_004936706:1,531,219...1,531,921 JBrowse link
G Apoc3 apolipoprotein C3 ISO (PMID:1917954) BHF-UCL PMID:1917954 NCBI chrNW_004936542:2,106,927...2,108,412 JBrowse link
G Lrpap1 LDL receptor related protein associated protein 1 ISO (PMID:8083232) BHF-UCL PMID:8083232 NCBI chrNW_004936477:20,234,582...20,250,756 JBrowse link
oxidised low-density lipoprotein particle clearance term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd36 CD36 molecule ISO (PMID:27607416) ARUK-UCL PMID:27607416 NCBI chrNW_004936810:791,823...838,303 JBrowse link
positive regulation of chylomicron remnant clearance term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpihbp1 glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1 ISO (MGI:3770110|PMID:17403372) BHF-UCL PMID:17403372 MGI:3770110 NCBI chrNW_004936470:8,798,095...8,800,176 JBrowse link
positive regulation of high-density lipoprotein particle clearance term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpld1 glycosylphosphatidylinositol specific phospholipase D1 ISO (MGI:3617276|PMID:16219662) UniProt PMID:16219662 MGI:3617276 NCBI chrNW_004936671:780,173...827,628 JBrowse link
G Lipg lipase G, endothelial type ISO (PMID:19136670) BHF-UCL PMID:19136670 NCBI chrNW_004936497:13,406,402...13,429,833 JBrowse link
positive regulation of low-density lipoprotein particle clearance term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa2 annexin A2 ISO (PMID:22848640)
(MGI:5446858|PMID:22848640)
BHF-UCL PMID:22848640 MGI:5446858 NCBI chrNW_004936471:21,274,112...21,329,286 JBrowse link
G Ldlrap1 low density lipoprotein receptor adaptor protein 1 ISO (PMID:28257760) BHF-UCL PMID:28257760 NCBI chrNW_004936474:10,196,228...10,219,137 JBrowse link
regulation of low-density lipoprotein particle clearance term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnpy2 canopy FGF signaling regulator 2 ISO (MGI:5427047|PMID:22378787) BHF-UCL PMID:22378787 MGI:5427047 NCBI chrNW_004936646:715,619...719,434 JBrowse link
G Crp C-reactive protein ISO RGD PMID:8305421 RGD:9586002 NCBI chrNW_004936740:885,855...888,854 JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K ISO (PMID:20371611) BHF-UCL PMID:20371611 NCBI chrNW_004936828:827,660...839,088 JBrowse link
G Nr1h4 nuclear receptor subfamily 1 group H member 4 ISO (PMID:12660231) UniProtKB PMID:12660231 NCBI chrNW_004936492:13,315,265...13,365,186 JBrowse link
triglyceride-rich lipoprotein particle clearance term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E ISO (PMID:23676495)
(MGI:5514108|PMID:23676495)
UniProt PMID:23676495 MGI:5514108 NCBI chrNW_004936706:1,512,438...1,516,805 JBrowse link
very-low-density lipoprotein particle clearance term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoc1 apolipoprotein C1 ISO (PMID:15576844) BHF-UCL PMID:15576844 NCBI chrNW_004936706:1,519,248...1,520,102 JBrowse link
G Apoe apolipoprotein E ISO (PMID:9649566)
(PMID:1917954), (PMID:2762297)
BHF-UCL
UniProt
PMID:1917954 PMID:2762297 PMID:9649566 NCBI chrNW_004936706:1,512,438...1,516,805 JBrowse link
G Vldlr very low density lipoprotein receptor ISO (PMID:8083232) BHF-UCL PMID:8083232 NCBI chrNW_004936503:2,407,040...2,440,366 JBrowse link

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