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ONTOLOGY REPORT - ANNOTATIONS

Term:plasma lipoprotein particle assembly
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Accession:GO:0034377 term browser browse the term
Definition:The non-covalent aggregation and arrangement of proteins and lipids to form a plasma lipoprotein particle.


show annotations for term's descendants           Sort by:
plasma lipoprotein particle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mttp microsomal triglyceride transfer protein involved_in ISS
ISO		 GO_REF:0000024
(PMID:16478722), (PMID:23475612), (PMID:26224785), (PMID:8876250)		 UniProt
RGD		 PMID:8876250 PMID:16478722 PMID:23475612 PMID:26224785 GO_REF:0000024 NCBI chr 2:226,613,090...226,654,239
Ensembl chr 2:226,613,090...226,654,239 		JBrowse link
chylomicron assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lpcat3 lysophosphatidylcholine acyltransferase 3 involved_in ISS
ISO		 GO_REF:0000024
(PMID:26833026)
(MGI:5780634|PMID:26833026)		 UniProt
RGD		 PMID:26833026 GO_REF:0000024 MGI:5780634 NCBI chr 4:157,468,397...157,509,889
Ensembl chr 4:157,468,290...157,509,880 		JBrowse link
G Plagl2 PLAG1 like zinc finger 2 acts_upstream_of_or_within ISO MGI:3771822 (PMID:17983586) RGD PMID:17983586 NCBI chr 3:141,695,322...141,708,516
Ensembl chr 3:141,695,322...141,708,503 		JBrowse link
high-density lipoprotein particle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 involved_in ISO (PMID:10431236), (PMID:14754908), (PMID:17305370) RGD PMID:10431236 PMID:14754908 PMID:17305370 NCBI chr 5:67,678,267...67,801,162
Ensembl chr 5:67,681,297...67,801,170 		JBrowse link
G Abca7 ATP binding cassette subfamily A member 7 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:14570867)		 Alzheimers_University_of_Toronto
Ensembl
RGD		 PMID:14570867 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:9,691,452...9,711,466
Ensembl chr 7:9,691,449...9,711,425 		JBrowse link
G Apoa1 apolipoprotein A1 involved_in ISO
IEA		 (PMID:190223)
GO_REF:0000107		 RGD
Ensembl		 PMID:190223 GO_REF:0000107 NCBI chr 8:46,527,251...46,529,035
Ensembl chr 8:46,527,144...46,529,035 		JBrowse link
G Apoa2 apolipoprotein A2 involved_in ISO (PMID:218942) RGD PMID:218942 NCBI chr13:83,644,460...83,646,358
Ensembl chr13:83,644,470...83,646,355 		JBrowse link
G Apoe apolipoprotein E involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:14754908), (PMID:17305370)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:14754908 PMID:17305370 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:79,353,924...79,357,852
Ensembl chr 1:79,353,916...79,357,932 		JBrowse link
G Apom apolipoprotein M involved_in ISO
IBA		 (MGI:3575626|PMID:15793583)
(PMID:15793583)
GO_REF:0000033		 RGD
GO_Central		 PMID:15793583 GO_REF:0000033 MGI:3575626 NCBI chr20:3,690,950...3,693,550
Ensembl chr20:3,688,413...3,693,550 		JBrowse link
positive regulation of high-density lipoprotein particle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 involved_in ISO (MGI:5427333|PMID:22179027)
(PMID:22179027)		 RGD PMID:22179027 MGI:5427333 NCBI chr 5:67,678,267...67,801,162
Ensembl chr 5:67,681,297...67,801,170 		JBrowse link
G Nr1h2 nuclear receptor subfamily 1, group H, member 2 involved_in ISO
IEA		 (MGI:3720271|PMID:17657314), (MGI:3794353|PMID:16825483)
GO_REF:0000107
(PMID:16825483), (PMID:17657314)		 RGD
Ensembl		 PMID:16825483 PMID:17657314 GO_REF:0000107 MGI:3720271 MGI:3794353 NCBI chr 1:95,041,967...95,047,358
Ensembl chr 1:95,041,967...95,047,377 		JBrowse link
G Pltp phospholipid transfer protein involved_in ISO (PMID:24369175) RGD PMID:24369175 NCBI chr 3:153,574,825...153,592,647
Ensembl chr 3:153,574,825...153,592,647 		JBrowse link
regulation of high-density lipoprotein particle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lcat lecithin cholesterol acyltransferase involved_in ISO
IEA		 (MGI:3848791|PMID:19065001)
GO_REF:0000107		 RGD
Ensembl		 PMID:19065001 GO_REF:0000107 MGI:3848791 NCBI chr19:33,834,748...33,838,214
Ensembl chr19:33,834,403...33,838,231 		JBrowse link
G Mir144 microRNA 144 involved_in ISO UniProtKB:O95477 (PMID:24733347) RGD PMID:24733347 NCBI chr10:62,961,348...62,961,430
Ensembl chr10:62,961,348...62,961,430 		JBrowse link
very-low-density lipoprotein particle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acsl3 acyl-CoA synthetase long-chain family member 3 involved_in ISO
IEA		 (PMID:18003621)
GO_REF:0000107		 RGD
Ensembl		 PMID:18003621 GO_REF:0000107 NCBI chr 9:80,115,164...80,164,636
Ensembl chr 9:80,115,112...80,164,627 		JBrowse link
G Arf1 ADP-ribosylation factor 1 IMP RGD PMID:15618550 RGD:9684856 NCBI chr10:43,997,983...44,014,461
Ensembl chr10:43,997,986...44,014,434 		JBrowse link
G Ces1d carboxylesterase 1D acts_upstream_of_or_within ISO MGI:4440967 (PMID:20197051) RGD PMID:20197051 NCBI chr19:13,873,490...13,912,035
Ensembl chr19:13,796,623...13,912,035 		JBrowse link
G Cideb cell death-inducing DFFA-like effector b involved_in ISO (MGI:3838086|PMID:19187774), (MGI:7444880|PMID:23297397)
(PMID:19187774), (PMID:23297397)		 RGD PMID:19187774 PMID:23297397 MGI:3838086 MGI:7444880 NCBI chr15:29,252,208...29,256,482
Ensembl chr15:29,252,213...29,256,605 		JBrowse link
G Dgat1 diacylglycerol O-acyltransferase 1 involved_in ISO
IEA		 (PMID:15308631)
GO_REF:0000107		 RGD
Ensembl		 PMID:15308631 GO_REF:0000107 NCBI chr 7:108,223,860...108,235,413
Ensembl chr 7:108,218,524...108,234,299 		JBrowse link
G Fech ferrochelatase acts_upstream_of_or_within ISO MGI:1858114 (PMID:11160364) RGD PMID:11160364 NCBI chr18:57,945,123...57,978,327
Ensembl chr18:57,945,122...57,979,348 		JBrowse link
G Lpcat3 lysophosphatidylcholine acyltransferase 3 involved_in ISS
ISO		 GO_REF:0000024
(PMID:25806685)
(MGI:5636535|PMID:25806685)		 UniProt
RGD		 PMID:25806685 GO_REF:0000024 MGI:5636535 NCBI chr 4:157,468,397...157,509,889
Ensembl chr 4:157,468,290...157,509,880 		JBrowse link
G Mfsd2a MFSD2 lysolipid transporter A, lysophospholipid acts_upstream_of_or_within ISO (MGI:5474727|PMID:23209793) RGD PMID:23209793 MGI:5474727 NCBI chr 5:135,225,801...135,240,744
Ensembl chr 5:135,225,816...135,240,690 		JBrowse link
G Soat1 sterol O-acyltransferase 1 involved_in ISO
IEA		 (PMID:15308631)
GO_REF:0000107		 RGD
Ensembl		 PMID:15308631 GO_REF:0000107 NCBI chr13:68,552,274...68,597,529
Ensembl chr13:68,552,317...68,597,494 		JBrowse link
G Soat2 sterol O-acyltransferase 2 involved_in IEA
ISO		 GO_REF:0000107
(PMID:15308631)		 Ensembl
RGD		 PMID:15308631 GO_REF:0000107 NCBI chr 7:133,281,818...133,294,915
Ensembl chr 7:133,281,818...133,294,915 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20134
    regulation of biological process 13139
      regulation of plasma lipoprotein particle levels 82
        plasma lipoprotein particle assembly 22
          chylomicron assembly 2
          high-density lipoprotein particle assembly + 10
          very-low-density lipoprotein particle assembly 10
Path 2
Term Annotations click to browse term
  biological_process 20134
    cellular process 19326
      cellular component organization or biogenesis 7062
        cellular component organization 6811
          cellular component assembly 3194
            protein-containing complex assembly 1623
              protein-lipid complex assembly 27
                plasma lipoprotein particle assembly 22
                  chylomicron assembly 2
                  high-density lipoprotein particle assembly + 10
                  very-low-density lipoprotein particle assembly 10
paths to the root