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ONTOLOGY REPORT - ANNOTATIONS


Term:protein-containing complex remodeling
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Accession:GO:0034367 term browser browse the term
Definition:The acquisition, loss, or modification of macromolecules within a complex, resulting in the alteration of an existing complex.
Synonyms:related_synonym: macromolecular complex remodeling



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chylomicron remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOA4 apolipoprotein A4 involved_in IC (PMID:2307668) BHF-UCL
BHF-UCL
PMID:2307668 NCBI chr11:116,820,700...116,823,304
Ensembl chr11:116,820,700...116,823,304
JBrowse link
G APOC2 apolipoprotein C2 involved_in IC (PMID:10727238) BHF-UCL
BHF-UCL
PMID:10727238 NCBI chr19:44,946,051...44,949,565
Ensembl chr19:44,946,035...44,949,565
JBrowse link
G LIPC lipase C, hepatic type ISO RGD PMID:7897313 RGD:2308767 NCBI chr15:58,410,554...58,569,844
Ensembl chr15:58,410,569...58,569,844
JBrowse link
G LPL lipoprotein lipase involved_in IC
IMP
(PMID:3973011)
(PMID:11342582)
BHF-UCL
BHF-UCL
UniProt
UniProt
PMID:3973011 PMID:11342582 NCBI chr 8:19,939,253...19,967,259
Ensembl chr 8:19,901,717...19,967,259
JBrowse link
DNA-templated transcription open complex formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TAF8 TATA-box binding protein associated factor 8 acts_upstream_of_or_within IDA (PMID:14580349) MGI
MGI
PMID:14580349 NCBI chr 6:42,050,524...42,087,462
Ensembl chr 6:42,050,513...42,087,461
JBrowse link
high-density lipoprotein particle remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA5 ATP binding cassette subfamily A member 5 involved_in ISS
IEA
(PMID:20382126) BHF-UCL
BHF-UCL
Ensembl
PMID:20382126 GO_REF:0000107 NCBI chr17:69,244,311...69,327,133
Ensembl chr17:69,244,311...69,327,244
JBrowse link
G ABCG1 ATP binding cassette subfamily G member 1 involved_in ISS
IEA
(PMID:16556852) BHF-UCL
Ensembl
BHF-UCL
PMID:16556852 GO_REF:0000107 NCBI chr21:42,199,689...42,297,244
Ensembl chr21:42,199,689...42,297,244
JBrowse link
G APOA1 apolipoprotein A1 involved_in IDA
IC
(PMID:21481393)
(PMID:21481393), (PMID:4335615)
(PMID:4335615)
BHF-UCL
BHF-UCL
PMID:4335615 PMID:21481393 NCBI chr11:116,835,751...116,837,950
Ensembl chr11:116,835,751...116,837,622
JBrowse link
G APOA2 apolipoprotein A2 involved_in IBA
IDA
(PMID:21873635)
(PMID:14967812), (PMID:8106353)
GO_Central
BHF-UCL
GO_Central
BHF-UCL
PMID:8106353 PMID:14967812 PMID:21873635 NCBI chr 1:161,222,292...161,223,628
Ensembl chr 1:161,222,292...161,223,631
JBrowse link
G APOA4 apolipoprotein A4 involved_in IC
IDA
(PMID:1935934) BHF-UCL
BHF-UCL
PMID:1935934 NCBI chr11:116,820,700...116,823,304
Ensembl chr11:116,820,700...116,823,304
JBrowse link
G APOC1 apolipoprotein C1 involved_in TAS (PMID:18992221) BHF-UCL
BHF-UCL
PMID:18992221 NCBI chr19:44,914,325...44,919,346
Ensembl chr19:44,914,247...44,919,349
JBrowse link
G APOC3 apolipoprotein C3 involved_in IMP (PMID:17438339) BHF-UCL
BHF-UCL
PMID:17438339 NCBI chr11:116,829,907...116,833,072
Ensembl chr11:116,829,706...116,833,072
JBrowse link
G APOE apolipoprotein E involved_in IGI (PMID:12401887) BHF-UCL
BHF-UCL
PMID:12401887 NCBI chr19:44,905,796...44,909,393
Ensembl chr19:44,905,791...44,909,393
JBrowse link
G APOM apolipoprotein M involved_in IMP
IEA
IBA
(PMID:18006500)
(PMID:21873635)
BHF-UCL
BHF-UCL
Ensembl
GO_Central
GO_Central
PMID:18006500 PMID:21873635 GO_REF:0000107 NCBI chr 6:31,652,404...31,658,210
Ensembl chr 6:31,652,416...31,658,210
JBrowse link
G CETP cholesteryl ester transfer protein involved_in IMP
IBA
IEA
IDA
(PMID:2586614)
(PMID:21873635)
(PMID:24293641)
BHF-UCL
BHF-UCL
GO_Central
UniProt
UniProt
GO_Central
PMID:2586614 PMID:21873635 PMID:24293641 GO_REF:0000104 NCBI chr16:56,961,950...56,983,845
Ensembl chr16:56,961,923...56,983,845
JBrowse link
G LCAT lecithin-cholesterol acyltransferase involved_in IDA
TAS
(PMID:10722751), (PMID:12167653), (PMID:15210842), (PMID:4335615) UniProt
Reactome
BHF-UCL
Reactome
PMID:4335615 PMID:10722751 PMID:12167653 PMID:15210842 Reactome:R-HSA-8964058 NCBI chr16:67,939,750...67,944,120
Ensembl chr16:67,939,750...67,944,131
JBrowse link
G LIPC lipase C, hepatic type involved_in IMP
ISO
(PMID:3244012) BHF-UCL
BHF-UCL
RGD
PMID:3244012 PMID:8157689 RGD:2308770 NCBI chr15:58,410,554...58,569,844
Ensembl chr15:58,410,569...58,569,844
JBrowse link
G LIPG lipase G, endothelial type involved_in IMP (PMID:19136670) BHF-UCL
BHF-UCL
PMID:19136670 NCBI chr18:49,561,479...49,599,185
Ensembl chr18:49,560,699...49,599,185
JBrowse link
G PLA2G3 phospholipase A2 group III involved_in IDA (PMID:18801741) UniProt
UniProt
PMID:18801741 NCBI chr22:31,134,807...31,140,508
Ensembl chr22:31,134,807...31,140,508
JBrowse link
G PLTP phospholipid transfer protein involved_in IDA
IBA
(PMID:24369175), (PMID:29883800), (PMID:9132017)
(PMID:21873635)
AgBase
GO_Central
AgBase
GO_Central
PMID:9132017 PMID:21873635 PMID:24369175 PMID:29883800 NCBI chr20:45,898,620...45,912,155
Ensembl chr20:45,898,621...45,912,155
JBrowse link
G SCARB1 scavenger receptor class B member 1 involved_in ISS
IEA
BHF-UCL
Ensembl
BHF-UCL
GO_REF:0000024 GO_REF:0000107 NCBI chr12:124,776,856...124,863,864
Ensembl chr12:124,776,856...124,882,668
JBrowse link
intermediate-density lipoprotein particle remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LIPC lipase C, hepatic type involved_in TAS (PMID:2839510) BHF-UCL
BHF-UCL
PMID:2839510 NCBI chr15:58,410,554...58,569,844
Ensembl chr15:58,410,569...58,569,844
JBrowse link
low-density lipoprotein particle remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCG1 ATP binding cassette subfamily G member 1 involved_in ISS
IEA
(PMID:16556852) BHF-UCL
BHF-UCL
Ensembl
PMID:16556852 GO_REF:0000107 NCBI chr21:42,199,689...42,297,244
Ensembl chr21:42,199,689...42,297,244
JBrowse link
G AGT angiotensinogen involved_in NAS (PMID:17069818) BHF-UCL
BHF-UCL
PMID:17069818 NCBI chr 1:230,702,523...230,745,583
Ensembl chr 1:230,690,776...230,745,576
JBrowse link
G AGTR1 angiotensin II receptor type 1 involved_in NAS (PMID:17069818) BHF-UCL
BHF-UCL
PMID:17069818 NCBI chr 3:148,697,903...148,743,003
Ensembl chr 3:148,697,784...148,743,008
JBrowse link
G APOA2 apolipoprotein A2 involved_in IBA
IDA
(PMID:21873635)
(PMID:8106353)
GO_Central
BHF-UCL
GO_Central
BHF-UCL
PMID:8106353 PMID:21873635 NCBI chr 1:161,222,292...161,223,628
Ensembl chr 1:161,222,292...161,223,631
JBrowse link
G APOB apolipoprotein B involved_in IMP (PMID:15797858) BHF-UCL
BHF-UCL
PMID:15797858 NCBI chr 2:21,001,429...21,044,073
Ensembl chr 2:21,001,429...21,044,073
JBrowse link
G APOE apolipoprotein E involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr19:44,905,796...44,909,393
Ensembl chr19:44,905,791...44,909,393
JBrowse link
G CETP cholesteryl ester transfer protein involved_in IBA
IDA
(PMID:21873635)
(PMID:2833496)
GO_Central
GO_Central
BHF-UCL
BHF-UCL
PMID:2833496 PMID:21873635 NCBI chr16:56,961,950...56,983,845
Ensembl chr16:56,961,923...56,983,845
JBrowse link
G LIPC lipase C, hepatic type involved_in IMP
ISO
(PMID:3244012) BHF-UCL
BHF-UCL
RGD
PMID:3244012 PMID:8071607 RGD:2308769 NCBI chr15:58,410,554...58,569,844
Ensembl chr15:58,410,569...58,569,844
JBrowse link
G MPO myeloperoxidase involved_in IDA (PMID:10772654) BHF-UCL
BHF-UCL
PMID:10772654 NCBI chr17:58,269,855...58,280,935
Ensembl chr17:58,269,855...58,280,935
JBrowse link
G MTTP microsomal triglyceride transfer protein involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:6095248|PMID:27471003) Ensembl
Ensembl
MGI
PMID:27471003 GO_REF:0000107 MGI:6095248 NCBI chr 4:99,564,130...99,623,997
Ensembl chr 4:99,564,081...99,623,997
JBrowse link
G PLA2G10 phospholipase A2 group X involved_in IDA (PMID:12021277) UniProt
UniProt
PMID:12021277 NCBI chr16:14,672,548...14,701,850
Ensembl chr16:14,672,548...14,694,308
JBrowse link
G PLA2G12B phospholipase A2 group XIIB acts_upstream_of_or_within ISO (MGI:6095248|PMID:27471003) MGI PMID:27471003 MGI:6095248 NCBI chr10:72,934,762...72,954,806
Ensembl chr10:72,934,762...72,954,806
JBrowse link
G PLA2G2A phospholipase A2 group IIA involved_in TAS (PMID:18827909) BHF-UCL
BHF-UCL
PMID:18827909 NCBI chr 1:19,975,431...19,980,434
Ensembl chr 1:19,975,431...19,980,416
JBrowse link
G PLA2G2E phospholipase A2 group IIE involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5605113|PMID:24910243) Ensembl
Ensembl
MGI
PMID:24910243 GO_REF:0000107 MGI:5605113 NCBI chr 1:19,920,009...19,923,617
Ensembl chr 1:19,920,009...19,923,617
JBrowse link
G PLA2G3 phospholipase A2 group III involved_in IDA (PMID:18801741) UniProt
UniProt
PMID:18801741 NCBI chr22:31,134,807...31,140,508
Ensembl chr22:31,134,807...31,140,508
JBrowse link
G PLA2G5 phospholipase A2 group V involved_in
acts_upstream_of_or_within
ISS
ISO
(MGI:5605113|PMID:24910243) UniProt
UniProt
MGI
PMID:24910243 GO_REF:0000024 MGI:5605113 NCBI chr 1:20,028,408...20,091,911
Ensembl chr 1:20,028,179...20,091,911
JBrowse link
G PLA2G7 phospholipase A2 group VII involved_in IDA (PMID:8624782) BHF-UCL
BHF-UCL
PMID:8624782 NCBI chr 6:46,704,201...46,735,721
Ensembl chr 6:46,704,201...46,735,693
JBrowse link
negative regulation of plasma lipoprotein oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOA4 apolipoprotein A4 involved_in IDA (PMID:16945374) BHF-UCL
BHF-UCL
PMID:16945374 NCBI chr11:116,820,700...116,823,304
Ensembl chr11:116,820,700...116,823,304
JBrowse link
G APOM apolipoprotein M involved_in IDA
IEA
(PMID:16682745), (PMID:22204862) BHF-UCL
Ensembl
BHF-UCL
PMID:16682745 PMID:22204862 GO_REF:0000107 NCBI chr 6:31,652,404...31,658,210
Ensembl chr 6:31,652,416...31,658,210
JBrowse link
G PON1 paraoxonase 1 NOT|involved_in IDA (PMID:15342686) BHF-UCL
BHF-UCL
PMID:15342686 NCBI chr 7:95,297,676...95,324,532
Ensembl chr 7:95,297,676...95,324,532
JBrowse link
negative regulation of very-low-density lipoprotein particle remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOA1 apolipoprotein A1 involved_in IDA (PMID:14967812) BHF-UCL
BHF-UCL
PMID:14967812 NCBI chr11:116,835,751...116,837,950
Ensembl chr11:116,835,751...116,837,622
JBrowse link
G APOA2 apolipoprotein A2 involved_in IDA (PMID:14967812) BHF-UCL
BHF-UCL
PMID:14967812 NCBI chr 1:161,222,292...161,223,628
Ensembl chr 1:161,222,292...161,223,631
JBrowse link
G APOC3 apolipoprotein C3 involved_in IDA
IC
(PMID:3973011)
(PMID:18635818)
BHF-UCL
BHF-UCL
PMID:3973011 PMID:18635818 NCBI chr11:116,829,907...116,833,072
Ensembl chr11:116,829,706...116,833,072
JBrowse link
G NR1H4 nuclear receptor subfamily 1 group H member 4 acts_upstream_of_or_within
involved_in
IDA
IEA
(PMID:27471003) MGI
MGI
Ensembl
PMID:27471003 GO_REF:0000107 NCBI chr12:100,473,866...100,564,414
Ensembl chr12:100,473,708...100,564,414
JBrowse link
plasma lipoprotein particle oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PLA2G7 phospholipase A2 group VII involved_in IDA (PMID:8624782) BHF-UCL
BHF-UCL
PMID:8624782 NCBI chr 6:46,704,201...46,735,721
Ensembl chr 6:46,704,201...46,735,693
JBrowse link
plasma lipoprotein particle remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOC1 apolipoprotein C1 involved_in IDA (PMID:10978346) BHF-UCL
BHF-UCL
PMID:10978346 NCBI chr19:44,914,325...44,919,346
Ensembl chr19:44,914,247...44,919,349
JBrowse link
positive regulation of very-low-density lipoprotein particle remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOA5 apolipoprotein A5 involved_in IDA (PMID:18635818) BHF-UCL
BHF-UCL
PMID:18635818 NCBI chr11:116,789,367...116,792,420
Ensembl chr11:116,789,367...116,792,420
JBrowse link
G APOC2 apolipoprotein C2 involved_in IC (PMID:10727238) BHF-UCL
BHF-UCL
PMID:10727238 NCBI chr19:44,946,051...44,949,565
Ensembl chr19:44,946,035...44,949,565
JBrowse link
transcription open complex formation at RNA polymerase II promoter term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GTF2E1 general transcription factor IIE subunit 1 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 3:120,742,744...120,783,069
Ensembl chr 3:120,742,637...120,783,069
JBrowse link
triglyceride-rich lipoprotein particle remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOA2 apolipoprotein A2 involved_in IBA
IDA
(PMID:21873635)
(PMID:14967812)
GO_Central
GO_Central
BHF-UCL
BHF-UCL
PMID:14967812 PMID:21873635 NCBI chr 1:161,222,292...161,223,628
Ensembl chr 1:161,222,292...161,223,631
JBrowse link
G APOA5 apolipoprotein A5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3695062|PMID:16166565) MGI
Ensembl
PMID:16166565 GO_REF:0000107 MGI:3695062 NCBI chr11:116,789,367...116,792,420
Ensembl chr11:116,789,367...116,792,420
JBrowse link
G APOC2 apolipoprotein C2 involved_in TAS (PMID:17018885) BHF-UCL
BHF-UCL
PMID:17018885 NCBI chr19:44,946,051...44,949,565
Ensembl chr19:44,946,035...44,949,565
JBrowse link
very-low-density lipoprotein particle remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOA1 apolipoprotein A1 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr11:116,835,751...116,837,950
Ensembl chr11:116,835,751...116,837,622
JBrowse link
G APOA4 apolipoprotein A4 involved_in IBA
IDA
(PMID:21873635)
(PMID:2307668)
GO_Central
BHF-UCL
GO_Central
BHF-UCL
PMID:2307668 PMID:21873635 NCBI chr11:116,820,700...116,823,304
Ensembl chr11:116,820,700...116,823,304
JBrowse link
G APOA5 apolipoprotein A5 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr11:116,789,367...116,792,420
Ensembl chr11:116,789,367...116,792,420
JBrowse link
G APOC2 apolipoprotein C2 involved_in TAS (PMID:15778093) BHF-UCL
BHF-UCL
PMID:15778093 NCBI chr19:44,946,051...44,949,565
Ensembl chr19:44,946,035...44,949,565
JBrowse link
G APOE apolipoprotein E involved_in IDA
IGI
IEA
(PMID:15654758)
(PMID:12401887)
BHF-UCL
BHF-UCL
Ensembl
PMID:12401887 PMID:15654758 GO_REF:0000107 NCBI chr19:44,905,796...44,909,393
Ensembl chr19:44,905,791...44,909,393
JBrowse link
G CETP cholesteryl ester transfer protein involved_in IEA
IBA
IDA
(PMID:21873635)
(PMID:24293641), (PMID:2833496)
UniProt
GO_Central
UniProt
BHF-UCL
GO_Central
PMID:2833496 PMID:21873635 PMID:24293641 GO_REF:0000104 NCBI chr16:56,961,950...56,983,845
Ensembl chr16:56,961,923...56,983,845
JBrowse link
G LCAT lecithin-cholesterol acyltransferase involved_in IDA (PMID:15654758) BHF-UCL
BHF-UCL
PMID:15654758 NCBI chr16:67,939,750...67,944,120
Ensembl chr16:67,939,750...67,944,131
JBrowse link
G LIPC lipase C, hepatic type involved_in IDA
ISO
(PMID:8640403) BHF-UCL
BHF-UCL
RGD
PMID:6791934 PMID:8640403 RGD:2308780 NCBI chr15:58,410,554...58,569,844
Ensembl chr15:58,410,569...58,569,844
JBrowse link
G LPL lipoprotein lipase involved_in ISS
IDA
(PMID:3973011) BHF-UCL
BHF-UCL
PMID:3973011 GO_REF:0000024 NCBI chr 8:19,939,253...19,967,259
Ensembl chr 8:19,901,717...19,967,259
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19656
    cellular process 18146
      cellular component organization or biogenesis 7226
        cellular component organization 7027
          protein-containing complex organization 2052
            protein-containing complex remodeling 34
              protein-DNA complex remodeling + 2
              protein-DNA-RNA complex remodeling 0
              protein-RNA complex remodeling 0
              protein-lipid complex remodeling + 32
paths to the root