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ONTOLOGY REPORT - ANNOTATIONS

Term:protein-containing complex remodeling
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Accession:GO:0034367 term browser browse the term
Definition:The acquisition, loss, or modification of macromolecules within a complex, resulting in the alteration of an existing complex.
Synonyms:exact_synonym: protein-containing complex remodelling
 related_synonym: macromolecular complex remodeling;   macromolecular complex remodelling

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protein-containing complex remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DIAPH3 diaphanous related formin 3 acts_upstream_of_or_within ISO (PMID:33036023) MGI PMID:33036023 NCBI chr 3:37,455,326...37,951,237 JBrowse link
G DIAPH3 diaphanous related formin 3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr 3:37,663,051...37,951,107 JBrowse link
chylomicron remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOC2 apolipoprotein C2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:38,406,829...38,411,239
Ensembl chr 6:38,409,641...38,410,927 		JBrowse link
G APOH apolipoprotein H involved_in ISO (PMID:7417307) BHF-UCL PMID:7417307 NCBI chr16:55,209,142...55,231,176 JBrowse link
G LIPC lipase C, hepatic type ISO RGD PMID:7897313 RGD:2308767 NCBI chr26:24,946,843...25,109,338
Ensembl chr26:24,946,673...25,087,921 		JBrowse link
G LPL lipoprotein lipase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:18,009,049...18,038,315
Ensembl chr 8:18,009,093...18,038,598 		JBrowse link
DNA-templated transcription open complex formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TAF8 TATA-box binding protein associated factor 8 acts_upstream_of_or_within ISO (PMID:14580349) MGI PMID:14580349 NCBI chr17:30,065,086...30,105,653 JBrowse link
G TAF8 TATA-box binding protein associated factor 8 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 Ensembl chr17:30,079,467...30,105,596 JBrowse link
high-density lipoprotein particle remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA5 ATP binding cassette subfamily A member 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:52,278,563...52,373,218
Ensembl chr16:52,278,573...52,362,273 		JBrowse link
G ABCG1 ATP binding cassette subfamily G member 1 involved_in ISO (PMID:16556852), (PMID:21481393) BHF-UCL PMID:16556852 PMID:21481393 NCBI chr 2:86,098,818...86,176,101
Ensembl chr 2:86,099,414...86,179,949 		JBrowse link
G APOA1 apolipoprotein A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:108,201,967...108,203,902
Ensembl chr 1:108,201,439...108,203,609 		JBrowse link
G APOA2 apolipoprotein A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:2,757,939...2,760,356
Ensembl chr20:2,759,237...2,760,686 		JBrowse link
G APOA4 apolipoprotein A4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:108,186,627...108,190,508
Ensembl chr 1:108,186,921...108,189,698 		JBrowse link
G APOC3 apolipoprotein C3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:108,196,283...108,199,274
Ensembl chr 1:108,196,939...108,199,342 		JBrowse link
G APOE apolipoprotein E involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:38,377,154...38,381,219
Ensembl chr 6:38,376,887...38,381,438 		JBrowse link
G APOM apolipoprotein M involved_in ISO (PMID:18006500)
(PMID:15793583)		 BHF-UCL PMID:15793583 PMID:18006500
G CETP cholesteryl ester transfer protein involved_in IEA UniProt
TreeGrafter
Ensembl		 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:42,909,994...42,936,277
Ensembl chr 5:42,910,226...42,936,277 		JBrowse link
G LCAT lecithin-cholesterol acyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:59,495,936...59,500,530
Ensembl chr 5:59,497,115...59,500,448 		JBrowse link
G LIPC lipase C, hepatic type involved_in ISO
IEA		 RGD
Ensembl		 PMID:8157689 GO_REF:0000107 RGD:2308770 NCBI chr26:24,946,843...25,109,338
Ensembl chr26:24,946,673...25,087,921 		JBrowse link
G LIPG lipase G, endothelial type involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:31,368,189...31,395,103
Ensembl chr18:31,368,857...31,394,278 		JBrowse link
G PLA2G3 phospholipase A2 group III involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:14,025,373...14,033,214
Ensembl chr19:14,025,742...14,030,643 		JBrowse link
G PLTP phospholipid transfer protein involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:17,972,054...17,986,100
Ensembl chr 2:17,972,215...17,988,701 		JBrowse link
G SCARB1 scavenger receptor class B member 1 involved_in ISO (PMID:15210842), (PMID:21481393) BHF-UCL PMID:15210842 PMID:21481393 NCBI chr11:120,134,485...120,223,512
Ensembl chr11:120,134,874...120,216,904 		JBrowse link
low-density lipoprotein particle remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCG1 ATP binding cassette subfamily G member 1 involved_in ISO (PMID:16556852) BHF-UCL PMID:16556852 NCBI chr 2:86,098,818...86,176,101
Ensembl chr 2:86,099,414...86,179,949 		JBrowse link
G APOA2 apolipoprotein A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:2,757,939...2,760,356
Ensembl chr20:2,759,237...2,760,686 		JBrowse link
G APOB apolipoprotein B involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:86,624,209...86,669,175
Ensembl chr14:86,624,332...86,668,704 		JBrowse link
G APOE apolipoprotein E involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:38,377,154...38,381,219
Ensembl chr 6:38,376,887...38,381,438 		JBrowse link
G CETP cholesteryl ester transfer protein involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:42,909,994...42,936,277
Ensembl chr 5:42,910,226...42,936,277 		JBrowse link
G LIPC lipase C, hepatic type involved_in ISO
IEA		 RGD
Ensembl		 PMID:8071607 GO_REF:0000107 RGD:2308769 NCBI chr26:24,946,843...25,109,338
Ensembl chr26:24,946,673...25,087,921 		JBrowse link
G LOC103228738 group 10 secretory phospholipase A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:14,135,279...14,160,346
Ensembl chr 5:14,135,338...14,159,885 		JBrowse link
G MPO myeloperoxidase involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:35,120,194...35,130,851
Ensembl chr16:35,120,581...35,130,671 		JBrowse link
G MTTP microsomal triglyceride transfer protein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 7:47,706,591...47,765,154
Ensembl chr 7:47,717,089...47,765,149 		JBrowse link
G PLA2G12B phospholipase A2 group XIIB acts_upstream_of_or_within ISO (PMID:27471003) MGI PMID:27471003 NCBI chr 9:58,311,609...58,335,286
Ensembl chr 9:58,312,500...58,336,930 		JBrowse link
G PLA2G2A phospholipase A2 group IIA involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:112,564,414...112,569,735
Ensembl chr20:112,565,165...112,569,786 		JBrowse link
G PLA2G2E phospholipase A2 group IIE acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr20:112,632,404...112,636,571
Ensembl chr20:112,632,759...112,635,992 		JBrowse link
G PLA2G3 phospholipase A2 group III involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:14,025,373...14,033,214
Ensembl chr19:14,025,742...14,030,643 		JBrowse link
G PLA2G5 phospholipase A2 group V acts_upstream_of_or_within
involved_in		 ISO (PMID:24910243)
(PMID:14962950)		 MGI
UniProt		 PMID:14962950 PMID:24910243 NCBI chr20:112,465,341...112,487,082
Ensembl chr20:112,464,033...112,487,089 		JBrowse link
G PLA2G7 phospholipase A2 group VII involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:25,538,645...25,571,230
Ensembl chr17:25,538,438...25,574,269 		JBrowse link
negative regulation of plasma lipoprotein oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOA4 apolipoprotein A4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:108,186,627...108,190,508
Ensembl chr 1:108,186,921...108,189,698 		JBrowse link
G APOM apolipoprotein M involved_in ISO (PMID:16682745), (PMID:22204862)
(PMID:22204862)		 BHF-UCL PMID:16682745 PMID:22204862
G PON1 paraoxonase 1 NOT|involved_in ISO (PMID:15342686) BHF-UCL PMID:15342686 NCBI chr21:53,713,434...53,739,658
Ensembl chr21:53,714,012...53,739,875 		JBrowse link
negative regulation of very-low-density lipoprotein particle remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANGPTL3 angiopoietin like 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:70,452,771...70,461,590
Ensembl chr20:70,449,227...70,460,469 		JBrowse link
G ANGPTL4 angiopoietin like 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:7,719,359...7,728,799
Ensembl chr 6:7,719,400...7,729,302 		JBrowse link
G APOA1 apolipoprotein A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:108,201,967...108,203,902
Ensembl chr 1:108,201,439...108,203,609 		JBrowse link
G APOA2 apolipoprotein A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:2,757,939...2,760,356
Ensembl chr20:2,759,237...2,760,686 		JBrowse link
G APOC3 apolipoprotein C3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:108,196,283...108,199,274
Ensembl chr 1:108,196,939...108,199,342 		JBrowse link
G NR1H4 nuclear receptor subfamily 1 group H member 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr11:95,792,428...95,877,989
Ensembl chr11:95,792,996...95,878,293 		JBrowse link
plasma lipoprotein particle oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PLA2G7 phospholipase A2 group VII involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:25,538,645...25,571,230
Ensembl chr17:25,538,438...25,574,269 		JBrowse link
plasma lipoprotein particle remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOC1 apolipoprotein C1 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 6:38,386,190...38,387,159 JBrowse link
positive regulation of very-low-density lipoprotein particle remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOA5 apolipoprotein A5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:108,154,880...108,158,998
Ensembl chr 1:108,155,641...108,157,375 		JBrowse link
G APOC2 apolipoprotein C2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:38,406,829...38,411,239
Ensembl chr 6:38,409,641...38,410,927 		JBrowse link
regulation of chylomicron remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANGPTL3 angiopoietin like 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:70,452,771...70,461,590
Ensembl chr20:70,449,227...70,460,469 		JBrowse link
G ANGPTL4 angiopoietin like 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:7,719,359...7,728,799
Ensembl chr 6:7,719,400...7,729,302 		JBrowse link
triglyceride-rich lipoprotein particle remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOA2 apolipoprotein A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:2,757,939...2,760,356
Ensembl chr20:2,759,237...2,760,686 		JBrowse link
G APOA5 apolipoprotein A5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 1:108,154,880...108,158,998
Ensembl chr 1:108,155,641...108,157,375 		JBrowse link
very-low-density lipoprotein particle remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOA4 apolipoprotein A4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:108,186,627...108,190,508
Ensembl chr 1:108,186,921...108,189,698 		JBrowse link
G APOE apolipoprotein E involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:38,377,154...38,381,219
Ensembl chr 6:38,376,887...38,381,438 		JBrowse link
G APOH apolipoprotein H involved_in ISO (PMID:7417307) BHF-UCL PMID:7417307 NCBI chr16:55,209,142...55,231,176 JBrowse link
G CETP cholesteryl ester transfer protein involved_in IEA UniProt
TreeGrafter
Ensembl		 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:42,909,994...42,936,277
Ensembl chr 5:42,910,226...42,936,277 		JBrowse link
G LCAT lecithin-cholesterol acyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:59,495,936...59,500,530
Ensembl chr 5:59,497,115...59,500,448 		JBrowse link
G LIPC lipase C, hepatic type involved_in ISO
IEA		 RGD
Ensembl		 PMID:6791934 GO_REF:0000107 RGD:2308780 NCBI chr26:24,946,843...25,109,338
Ensembl chr26:24,946,673...25,087,921 		JBrowse link
G LPL lipoprotein lipase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:18,009,049...18,038,315
Ensembl chr 8:18,009,093...18,038,598 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19829
    cellular process 19347
      cellular component organization or biogenesis 8804
        cellular component organization 8578
          protein-containing complex organization 3753
            protein-containing complex remodeling 37
              protein-DNA complex remodeling + 2
              protein-DNA-RNA complex remodeling 0
              protein-RNA complex remodeling 0
              protein-lipid complex remodeling + 33
paths to the root