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ONTOLOGY REPORT - ANNOTATIONS

Term:response to type II interferon
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Accession:GO:0034341 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interferon-gamma stimulus. Interferon-gamma is also known as type II interferon.
Synonyms:exact_synonym: response to immune interferon;   response to type II IFN
 related_synonym: response to gamma-interferon


show annotations for term's descendants           Sort by:
response to type II interferon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAMTS13 ADAM metallopeptidase with thrombospondin type 1 motif 13 ISO RGD PMID:18433458 RGD:2315954 NCBI chr 9:49,839,252...49,867,295
Ensembl chr 9:49,839,252...49,867,295 		JBrowse link
G BST2 bone marrow stromal cell antigen 2 involved_in ISO (MGI:5448513|PMID:21919738) UniProt PMID:21919738 MGI:5448513 NCBI chr20:45,383,757...45,387,420
Ensembl chr20:45,383,915...45,387,178 		JBrowse link
G CALCOCO2 calcium binding and coiled-coil domain 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:25,050,603...25,078,147
Ensembl chr 9:25,050,690...25,077,557 		JBrowse link
G CCL5 C-C motif chemokine ligand 5 involved_in ISO PMID:10477596 BHF-UCL PMID:10477596 RGD:8553666 NCBI chr 9:37,817,409...37,823,852
Ensembl chr 9:37,817,305...37,823,852 		JBrowse link
G CD40 CD40 molecule involved_in ISO
IEA		 with tumor necrosis factor alpha RGD
TreeGrafter		 PMID:10403401 GO_REF:0000118 RGD:634252 NCBI chr24:33,352,992...33,383,488
Ensembl chr24:33,372,930...33,383,301 		JBrowse link
G CD74 CD74 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:58,689,745...58,698,421
Ensembl chr 4:58,689,752...58,698,151 		JBrowse link
G CD86 CD86 molecule ISO RGD PMID:16839612 RGD:2313438 NCBI chr33:25,256,267...25,318,855
Ensembl chr33:25,256,267...25,318,087 		JBrowse link
G CIITA class II major histocompatibility complex transactivator involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16280321) Ensembl
MGI		 PMID:16280321 GO_REF:0000107 NCBI chr 6:31,774,486...31,837,025
Ensembl chr 6:31,774,609...31,836,820 		JBrowse link
G CITED1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:56,327,104...56,332,608
Ensembl chr  X:56,327,182...56,332,047 		JBrowse link
G CXCL16 C-X-C motif chemokine ligand 16 involved_in IEA InterPro GO_REF:0000002 NCBI chr 5:31,816,889...31,820,975
Ensembl chr 5:31,816,667...31,820,840 		JBrowse link
G CYP27B1 cytochrome P450 family 27 subfamily B member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:1,825,224...1,830,845
Ensembl chr10:1,826,046...1,829,911 		JBrowse link
G DLA-DQA1 major histocompatibility complex, class II, DQ alpha 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:2,221,181...2,227,600
Ensembl chr12:2,221,137...2,227,600 		JBrowse link
G DNAJA3 DnaJ heat shock protein family (Hsp40) member A3 involved_in ISO (PMID:11679576) UniProt PMID:11679576 NCBI chr 6:36,921,941...36,967,718
Ensembl chr 6:36,917,858...36,967,689 		JBrowse link
G GCH1 GTP cyclohydrolase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:30,733,422...30,784,067
Ensembl chr 8:30,732,608...30,784,156 		JBrowse link
G HLA-DRB1 MHC class II DLA DRB1 beta chain involved_in ISO (MGI:5009185|PMID:11465104) BHF-UCL PMID:11465104 MGI:5009185 NCBI chr12:2,151,409...2,164,564 JBrowse link
G HMGB1 high mobility group box 1 ISO RGD PMID:18004227 RGD:2316773 NCBI chr25:9,431,223...9,558,167
Ensembl chr25:9,431,218...9,558,165 		JBrowse link
G IL23R interleukin 23 receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:43,307,422...43,369,806
Ensembl chr 5:43,308,982...43,368,474 		JBrowse link
G KYNU kynureninase involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:45,022,450...45,150,977
Ensembl chr19:45,022,072...45,149,339 		JBrowse link
G LOC119864110 interferon-induced transmembrane protein 1-like involved_in IEA TreeGrafter GO_REF:0000118
G LOC119864111 interferon-induced transmembrane protein 1-like involved_in IEA TreeGrafter GO_REF:0000118
G LOC119864112 interferon-induced transmembrane protein 1-like involved_in IEA TreeGrafter GO_REF:0000118
G LOC119864113 interferon-induced transmembrane protein 1-like involved_in IEA TreeGrafter GO_REF:0000118
G LOC119864114 interferon-induced transmembrane protein 1-like involved_in IEA TreeGrafter GO_REF:0000118
G LOC475935 interferon-induced transmembrane protein 1-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr18:25,484,731...25,485,927 JBrowse link
G LOC475936 interferon-induced transmembrane protein 1-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr18:25,486,525...25,488,376 JBrowse link
G LOC483396 interferon-induced transmembrane protein 1-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr18:25,461,913...25,463,021 JBrowse link
G LOC483397 interferon-induced transmembrane protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr18:25,494,018...25,495,114 JBrowse link
G LOC606890 interferon-induced transmembrane protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr18:25,459,466...25,461,399 JBrowse link
G MEFV MEFV innate immunity regulator, pyrin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:37,964,776...37,984,830
Ensembl chr 6:37,970,608...37,983,737 		JBrowse link
G NUB1 negative regulator of ubiquitin like proteins 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:15,355,237...15,382,284
Ensembl chr16:15,352,476...15,381,095 		JBrowse link
G SEC61A1 SEC61 translocon subunit alpha 1 ISO RGD PMID:16604358 RGD:2312768 NCBI chr20:2,070,739...2,087,790
Ensembl chr20:2,070,248...2,087,789 		JBrowse link
G SHFL shiftless antiviral inhibitor of ribosomal frameshifting involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:50,961,557...50,966,261
Ensembl chr20:50,961,551...50,965,961 		JBrowse link
G SLC11A1 solute carrier family 11 member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9261342) Ensembl
MGI		 PMID:9261342 GO_REF:0000107 NCBI chr37:25,039,203...25,047,461
Ensembl chr37:25,038,360...25,047,282 		JBrowse link
G SLC22A5 solute carrier family 22 member 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:20,659,023...20,686,359
Ensembl chr11:20,598,888...20,683,087 		JBrowse link
G SLC30A8 solute carrier family 30 member 8 ISO RGD PMID:19243577 RGD:2315023 NCBI chr13:16,602,255...16,637,299
Ensembl chr13:16,601,912...16,635,880 		JBrowse link
G SNCA synuclein alpha involved_in ISO (PMID:19157893) UniProt PMID:19157893 NCBI chr32:12,915,871...13,079,338
Ensembl chr32:12,916,215...13,060,383 		JBrowse link
G SP100 SP100 nuclear antigen involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:42,538,428...42,635,825
Ensembl chr25:42,538,571...42,635,649 		JBrowse link
G STAT1 signal transducer and activator of transcription 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:1,513,438...1,549,837
Ensembl chr37:1,507,219...1,550,178 		JBrowse link
G TRIM21 tripartite motif containing 21 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:26,775,227...26,783,180
Ensembl chr21:26,775,672...26,783,725 		JBrowse link
G UBD ubiquitin D involved_in ISO (PMID:17889673)
(MGI:3640020|PMID:16782901)		 UniProt PMID:16782901 PMID:17889673 MGI:3640020 NCBI chr35:26,426,919...26,436,189 JBrowse link
cellular response to type II interferon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACOD1 aconitate decarboxylase 1 involved_in ISO (MGI:5489057|PMID:19014335) UniProt PMID:19014335 MGI:5489057 NCBI chr22:30,545,991...30,557,199
Ensembl chr22:30,547,271...30,555,510 		JBrowse link
G ACTG1 actin gamma 1 acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chr 9:635,978...638,328
Ensembl chr 9:635,978...638,328 		JBrowse link
G ACTR2 actin related protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19144319) Ensembl
MGI		 PMID:19144319 GO_REF:0000107 NCBI chr10:64,696,068...64,733,027
Ensembl chr10:64,696,111...64,730,553 		JBrowse link
G ACTR3 actin related protein 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19144319) Ensembl
MGI		 PMID:19144319 GO_REF:0000107 NCBI chr19:35,097,968...35,133,330
Ensembl chr19:35,098,639...35,169,724 		JBrowse link
G ADAMTS13 ADAM metallopeptidase with thrombospondin type 1 motif 13 ISO RGD PMID:18433458 RGD:2315954 NCBI chr 9:49,839,252...49,867,295
Ensembl chr 9:49,839,252...49,867,295 		JBrowse link
G AIF1 allograft inflammatory factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:1,104,350...1,106,179
Ensembl chr12:1,104,394...1,106,177 		JBrowse link
G AQP4 aquaporin 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:61,855,617...61,868,953
Ensembl chr 7:61,855,744...61,865,089 		JBrowse link
G ARG2 arginase 2 ISO RGD PMID:11250887 RGD:4144048 NCBI chr 8:41,588,051...41,619,406
Ensembl chr 8:41,588,150...41,619,402 		JBrowse link
G ASL argininosuccinate lyase ISO with TNFalpha RGD PMID:11072090 RGD:4139899 NCBI chr 6:768,522...779,144
Ensembl chr 6:730,358...779,424 		JBrowse link
G ASS1 argininosuccinate synthase 1 ISO with TNFalpha RGD PMID:11072090 PMID:12589771 RGD:1599307 RGD:4139899 NCBI chr 9:53,425,228...53,478,007
Ensembl chr 9:53,425,448...53,477,904 		JBrowse link
G CALM1 calmodulin 1 involved_in ISO (PMID:11972023) UniProt PMID:11972023 NCBI chr 8:61,398,231...61,408,874
Ensembl chr 8:61,398,244...61,406,195 		JBrowse link
G CALM2 calmodulin 2 involved_in ISO (PMID:11972023) UniProt PMID:11972023 NCBI chr10:49,299,698...49,314,533
Ensembl chr10:49,299,897...49,314,457 		JBrowse link
G CALM3 calmodulin 3 involved_in ISO (PMID:11972023) UniProt PMID:11972023 NCBI chr 1:109,284,729...109,294,491
Ensembl chr 1:109,286,155...109,294,391 		JBrowse link
G CAMK2A calcium/calmodulin dependent protein kinase II alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:58,800,818...58,865,830
Ensembl chr 4:58,800,813...58,865,830 		JBrowse link
G CAPG capping actin protein, gelsolin like acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chr17:39,619,429...39,640,944
Ensembl chr17:39,619,248...39,640,942 		JBrowse link
G CCL2 C-C motif chemokine ligand 2 involved_in ISO (MGI:3699670|PMID:14662900)
(PMID:9407497)		 RGD
BHF-UCL
UniProt		 PMID:9407497 PMID:14512159 PMID:14662900 MGI:3699670 RGD:8548859 NCBI chr 9:39,008,187...39,009,932 JBrowse link
G CCL5 C-C motif chemokine ligand 5 involved_in ISO (PMID:9407497) UniProt PMID:9407497 NCBI chr 9:37,817,409...37,823,852
Ensembl chr 9:37,817,305...37,823,852 		JBrowse link
G CD47 CD47 molecule involved_in ISO PMID:12023387 ARUK-UCL PMID:12023387 RGD:625650 NCBI chr33:13,315,984...13,362,971
Ensembl chr33:13,319,266...13,363,580 		JBrowse link
G CD58 CD58 molecule involved_in ISO (PMID:19109405) UniProt PMID:19109405 NCBI chr17:53,969,207...53,997,306
Ensembl chr17:53,973,029...53,995,672 		JBrowse link
G CDC42EP2 CDC42 effector protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19144319) Ensembl
MGI		 PMID:19144319 GO_REF:0000107 NCBI chr18:51,854,975...51,863,594
Ensembl chr18:51,857,367...51,858,011 		JBrowse link
G CDC42EP4 CDC42 effector protein 4 acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chr 9:6,888,183...6,909,986
Ensembl chr 9:6,907,205...6,964,626 		JBrowse link
G CELSR3 cadherin EGF LAG seven-pass G-type receptor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:40,457,430...40,495,128
Ensembl chr20:40,457,657...40,483,881 		JBrowse link
G CFH complement factor H ISO RGD PMID:12121434 RGD:632369 NCBI chr38:2,878,677...2,956,226 JBrowse link
G CIITA class II major histocompatibility complex transactivator ISO RGD PMID:11071855 RGD:632488 NCBI chr 6:31,774,486...31,837,025
Ensembl chr 6:31,774,609...31,836,820 		JBrowse link
G CLDN1 claudin 1 ISO RGD PMID:18768927 RGD:11344890 NCBI chr34:22,303,058...22,319,101
Ensembl chr34:22,303,850...22,319,033 		JBrowse link
G CRIPTO cripto, EGF-CFC family member involved_in ISO (PMID:17720976) UniProt PMID:17720976 NCBI chr20:42,137,939...42,140,590 JBrowse link
G DAPK1 death associated protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:72,278,939...72,448,907
Ensembl chr 1:72,280,103...72,447,822 		JBrowse link
G DAPK3 death associated protein kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:55,590,199...55,603,883
Ensembl chr20:55,590,223...55,602,682 		JBrowse link
G DAXX death domain associated protein ISO RGD PMID:21572393 RGD:9587767 NCBI chr12:2,755,960...2,760,687
Ensembl chr12:2,755,960...2,761,340 		JBrowse link
G DLA-DQB1 major histocompatibility complex, class II, DQ beta 1 involved_in ISO (MGI:4942269|PMID:9244347), (MGI:4942274|PMID:7691725), (MGI:4942276|PMID:2502420), (MGI:4942277|PMID:2493384), (MGI:4943415|PMID:1845803) BHF-UCL PMID:1845803 PMID:2493384 PMID:2502420 PMID:7691725 PMID:9244347 MGI:4942269 MGI:4942274 MGI:4942276 MGI:4942277 MGI:4943415 NCBI chr12:2,305,307...2,307,711 JBrowse link
G EDN1 endothelin 1 ISO RGD PMID:22301113 RGD:8662301 NCBI chr35:11,808,892...11,815,383
Ensembl chr35:11,808,892...11,815,383 		JBrowse link
G EPRS1 glutamyl-prolyl-tRNA synthetase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr38:14,754,628...14,823,626
Ensembl chr38:14,754,632...14,823,621 		JBrowse link
G EVL Enah/Vasp-like acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chr 8:68,352,717...68,461,684
Ensembl chr 8:68,352,853...68,484,269 		JBrowse link
G FAS Fas cell surface death receptor ISO RGD PMID:10029626 RGD:14700709 NCBI chr26:38,738,811...38,763,298
Ensembl chr26:38,737,611...38,763,321 		JBrowse link
G FASLG Fas ligand ISO RGD PMID:10029626 RGD:14700709 NCBI chr 7:26,335,837...26,344,224
Ensembl chr 7:26,335,846...26,344,224 		JBrowse link
G FCAR Fc fragment of IgA receptor involved_in ISO (PMID:25339672) CAFA PMID:25339672 NCBI chr 1:102,709,675...102,720,680 JBrowse link
G FLNB filamin B acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chr20:32,394,755...32,533,440
Ensembl chr20:32,396,165...32,533,275 		JBrowse link
G GAPDH glyceraldehyde-3-phosphate dehydrogenase involved_in ISO (PMID:15479637) UniProt PMID:15479637 NCBI chr27:38,468,889...38,472,653
Ensembl chr27:38,468,889...38,472,385 		JBrowse link
G GBP1 guanylate binding protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18025219) Ensembl
MGI		 PMID:18025219 GO_REF:0000107 NCBI chr 6:59,378,069...59,393,388
Ensembl chr 6:59,273,592...59,393,229 		JBrowse link
G GBP5 guanylate binding protein 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18025219) Ensembl
MGI		 PMID:18025219 GO_REF:0000107 NCBI chr 6:59,273,699...59,292,563
Ensembl chr 6:59,273,592...59,393,229 		JBrowse link
G GBP6 guanylate binding protein family member 6 acts_upstream_of_or_within ISO (PMID:18025219) MGI PMID:18025219 NCBI chr 6:59,150,665...59,170,070
Ensembl chr 6:59,158,855...59,169,646 		JBrowse link
G GSN gelsolin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19144319) Ensembl
MGI		 PMID:19144319 GO_REF:0000107 NCBI chr11:74,248,227...74,268,129
Ensembl chr11:74,233,457...74,268,129 		JBrowse link
G ICAM1 intercellular adhesion molecule 1 ISO RGD PMID:7865494 RGD:11520781 NCBI chr20:50,818,715...50,827,914
Ensembl chr20:50,818,715...50,827,914 		JBrowse link
G IL12B interleukin 12B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18025219) Ensembl
MGI		 PMID:18025219 GO_REF:0000107 NCBI chr 4:51,178,637...51,194,606
Ensembl chr 4:51,183,568...51,193,228 		JBrowse link
G IL12RB1 interleukin 12 receptor subunit beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:44,885,410...44,908,139
Ensembl chr20:44,885,337...44,904,538 		JBrowse link
G IL18 interleukin 18 ISO RGD PMID:18547159 RGD:4889457 NCBI chr 5:20,972,742...20,995,327
Ensembl chr 5:20,972,871...20,995,348 		JBrowse link
G IRF1 interferon regulatory factor 1 ISO RGD PMID:21261980 RGD:5128727 NCBI chr11:20,773,801...20,781,106
Ensembl chr11:20,760,120...20,781,608 		JBrowse link
G IRF8 interferon regulatory factor 8 involved_in IEA
ISO		 Ensembl
RGD		 PMID:21261980 GO_REF:0000107 RGD:5128727 NCBI chr 5:66,789,264...66,812,477
Ensembl chr 5:66,791,350...66,842,179 		JBrowse link
G KIF16B kinesin family member 16B acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chr24:6,260,558...6,576,544
Ensembl chr24:6,261,553...6,575,845 		JBrowse link
G KIF5B kinesin family member 5B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19144319) Ensembl
MGI		 PMID:19144319 GO_REF:0000107 NCBI chr 2:14,835,906...14,880,896
Ensembl chr 2:14,835,901...14,878,251 		JBrowse link
G LGALS9 galectin 9 involved_in ISO (PMID:23817958) UniProt PMID:23817958 NCBI chr 9:42,154,613...42,170,423
Ensembl chr 9:42,154,702...42,170,391 		JBrowse link
G LOC403934 cell division cycle 42 acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chr 2:77,153,276...77,169,947
Ensembl chr 2:77,153,095...77,199,211 		JBrowse link
G LOC480600 chemokine (C-C motif) ligand 3 involved_in ISO (PMID:9407497) UniProt PMID:9407497 NCBI chr 9:37,708,561...37,710,209
Ensembl chr 9:37,676,966...37,710,209 		JBrowse link
G LOC606863 immunity-related GTPase family M protein-like acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chr11:506,981...523,338
Ensembl chr11:509,636...510,829 		JBrowse link
G MRC1 mannose receptor C-type 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22832163) Ensembl
MGI		 PMID:22832163 GO_REF:0000107 NCBI chr 2:19,090,580...19,185,943
Ensembl chr 2:19,069,120...19,185,691 		JBrowse link
G MST1 macrophage stimulating 1 ISO RGD PMID:21572393 RGD:9587767 NCBI chr20:39,582,237...39,586,958
Ensembl chr20:39,582,282...39,586,908 		JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:7524476 RGD:10059620 NCBI chr13:25,200,772...25,205,309
Ensembl chr13:25,200,577...25,205,309 		JBrowse link
G MYO18A myosin XVIIIA acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chr 9:43,226,170...43,325,026
Ensembl chr 9:43,227,187...43,322,545 		JBrowse link
G MYO1C myosin IC involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19144319) Ensembl
MGI		 PMID:19144319 GO_REF:0000107 NCBI chr 9:45,635,295...45,658,226
Ensembl chr 9:45,636,208...45,658,035 		JBrowse link
G NOS2 nitric oxide synthase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18025219) Ensembl
MGI		 PMID:18025219 GO_REF:0000107 NCBI chr 9:42,171,821...42,210,217
Ensembl chr 9:42,171,821...42,208,588 		JBrowse link
G PDE12 phosphodiesterase 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:32,884,819...32,890,995
Ensembl chr20:32,886,972...32,890,890 		JBrowse link
G PECAM1 platelet and endothelial cell adhesion molecule 1 ISO RGD PMID:18466611 RGD:2311658 NCBI chr 9:12,166,124...12,219,553
Ensembl chr 9:12,166,775...12,219,778 		JBrowse link
G PIM1 Pim-1 proto-oncogene, serine/threonine kinase involved_in ISO (PMID:37797010) UniProt PMID:37797010 NCBI chr12:6,213,504...6,217,933
Ensembl chr12:6,211,867...6,217,933 		JBrowse link
G RAB11FIP5 RAB11 family interacting protein 5 acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chr17:49,735,511...49,772,228
Ensembl chr17:49,735,097...49,803,741 		JBrowse link
G RAB12 RAB12, member RAS oncogene family acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chr 7:74,752,697...74,791,872 JBrowse link
G RAB20 RAB20, member RAS oncogene family involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19144319) Ensembl
MGI		 PMID:19144319 GO_REF:0000107 NCBI chr22:58,825,147...58,853,921
Ensembl chr22:58,825,667...58,853,667 		JBrowse link
G RAB43 RAB43, member RAS oncogene family acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chr20:2,979,094...3,020,496
Ensembl chr20:2,978,727...3,011,715 		JBrowse link
G RAB7B RAB7B, member RAS oncogene family involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19144319) Ensembl
MGI		 PMID:19144319 GO_REF:0000107 NCBI chr38:2,333,939...2,359,531
Ensembl chr38:2,335,535...2,359,469 		JBrowse link
G RPL13A ribosomal protein L13a involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:107,010,190...107,014,267
Ensembl chr 1:107,010,190...107,014,267 		JBrowse link
G RPS6KB1 ribosomal protein S6 kinase B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:34,387,084...34,590,603
Ensembl chr 9:34,387,091...34,425,292 		JBrowse link
G SIRPA signal regulatory protein alpha involved_in ISO PMID:12023387 ARUK-UCL PMID:12023387 RGD:625650 NCBI chr24:19,094,930...19,136,655 JBrowse link
G SLK STE20 like kinase ISO RGD PMID:21572393 RGD:9587767 NCBI chr28:16,286,827...16,347,766
Ensembl chr28:16,286,688...16,346,368 		JBrowse link
G SOCS1 suppressor of cytokine signaling 1 ISO RGD PMID:10707961 RGD:151232287 NCBI chr 6:31,511,003...31,511,995
Ensembl chr 6:31,509,268...31,511,557 		JBrowse link
G SOCS3 suppressor of cytokine signaling 3 ISO RGD PMID:10707961 RGD:151232287 NCBI chr 9:2,859,267...2,859,944 JBrowse link
G STAR steroidogenic acute regulatory protein ISO RGD PMID:9564825 RGD:4891971 NCBI chr16:27,326,355...27,331,025
Ensembl chr16:27,326,355...27,331,025 		JBrowse link
G STAT1 signal transducer and activator of transcription 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:1,513,438...1,549,837
Ensembl chr37:1,507,219...1,550,178 		JBrowse link
G STX11 syntaxin 11 acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chr 1:35,600,440...35,645,421
Ensembl chr 1:35,601,133...35,644,819 		JBrowse link
G STX4 syntaxin 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19144319) Ensembl
MGI		 PMID:19144319 GO_REF:0000107 NCBI chr 6:17,184,044...17,189,481
Ensembl chr 6:17,184,399...17,189,370 		JBrowse link
G STX8 syntaxin 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19144319) Ensembl
MGI		 PMID:19144319 GO_REF:0000107 NCBI chr 5:33,834,218...34,091,827
Ensembl chr 5:33,834,279...34,091,757 		JBrowse link
G STXBP1 syntaxin binding protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19144319) Ensembl
MGI		 PMID:19144319 GO_REF:0000107 NCBI chr 9:55,690,939...55,768,008
Ensembl chr 9:55,678,264...55,727,680 		JBrowse link
G STXBP2 syntaxin binding protein 2 acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chr20:52,413,174...52,421,525
Ensembl chr20:52,413,191...52,421,517 		JBrowse link
G STXBP3 syntaxin binding protein 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19144319) Ensembl
MGI		 PMID:19144319 GO_REF:0000107 NCBI chr 6:42,947,639...42,998,297
Ensembl chr 6:42,948,236...43,053,027 		JBrowse link
G STXBP4 syntaxin binding protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19144319) Ensembl
MGI		 PMID:19144319 GO_REF:0000107 NCBI chr 9:30,079,797...30,293,750
Ensembl chr 9:30,092,289...30,236,135 		JBrowse link
G SYNCRIP synaptotagmin binding cytoplasmic RNA interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:45,613,947...45,644,879
Ensembl chr12:45,618,234...45,644,778 		JBrowse link
G TLR2 toll like receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:51,454,557...51,465,429
Ensembl chr15:51,454,695...51,465,241 		JBrowse link
G TLR2 toll like receptor 2 involved_in IEA Ensembl GO_REF:0000107
G TLR3 toll like receptor 3 NOT ISO intestinal epithelial cells
thyrocytes		 RGD PMID:15661832 PMID:16638093 RGD:5128794 RGD:5128798 NCBI chr16:44,617,012...44,633,591
Ensembl chr16:44,550,846...44,653,247 		JBrowse link
G TLR4 toll like receptor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:71,356,390...71,367,166
Ensembl chr11:71,356,390...71,367,165 		JBrowse link
G TNF tumor necrosis factor involved_in ISO
IEA		 RGD
Ensembl		 PMID:16525716 GO_REF:0000107 RGD:14985246 NCBI chr12:1,074,561...1,076,425
Ensembl chr12:1,074,552...1,076,425 		JBrowse link
G VAMP3 vesicle associated membrane protein 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19144319) Ensembl
MGI		 PMID:19144319 GO_REF:0000107 NCBI chr 5:61,430,711...61,440,626
Ensembl chr 5:61,430,740...61,439,063 		JBrowse link
G VAMP4 vesicle associated membrane protein 4 acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chr 7:27,278,200...27,303,499
Ensembl chr 7:27,278,231...27,302,225 		JBrowse link
G VAMP8 vesicle associated membrane protein 8 acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chr17:39,497,628...39,501,734
Ensembl chr17:39,497,785...39,501,739 		JBrowse link
G VIM vimentin acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chr 2:19,671,316...19,679,367
Ensembl chr 2:19,671,316...19,679,466 		JBrowse link
G VPS26B VPS26, retromer complex component B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19144319) Ensembl
MGI		 PMID:19144319 GO_REF:0000107 NCBI chr 5:1,000,035...1,020,195
Ensembl chr 5:999,392...1,020,196 		JBrowse link
G WAS WASP actin nucleation promoting factor acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chr  X:41,882,240...41,890,053
Ensembl chr  X:41,882,875...41,890,058 		JBrowse link
G WNT5A Wnt family member 5A involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:34,756,430...34,790,937
Ensembl chr20:34,769,930...34,786,673 		JBrowse link
G ZYX zyxin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19144319) Ensembl
MGI		 PMID:19144319 GO_REF:0000107 NCBI chr16:6,304,163...6,313,923 JBrowse link
negative regulation of type II interferon-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARG1 arginase 1 involved_in ISO (PMID:16709924) UniProt PMID:16709924 NCBI chr12:242,717...255,736
Ensembl chr12:242,714...255,305 		JBrowse link
G DNAJA3 DnaJ heat shock protein family (Hsp40) member A3 involved_in ISO (PMID:11679576) UniProt PMID:11679576 NCBI chr 6:36,921,941...36,967,718
Ensembl chr 6:36,917,858...36,967,689 		JBrowse link
G OTOP1 otopetrin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:69,639,550...69,665,051
Ensembl chr 3:69,640,492...69,649,201 		JBrowse link
G PARP14 poly(ADP-ribose) polymerase family member 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr33:25,763,282...25,798,284
Ensembl chr33:25,763,255...25,798,198 		JBrowse link
G PPARG peroxisome proliferator activated receptor gamma involved_in ISO (PMID:21268089) BHF-UCL PMID:21268089 NCBI chr20:6,134,618...6,265,481
Ensembl chr20:6,050,357...6,207,981 		JBrowse link
G PTPN2 protein tyrosine phosphatase non-receptor type 2 involved_in
NOT|involved_in		 IEA
ISO		 (PMID:12138178) Ensembl
UniProt		 PMID:12138178 GO_REF:0000107 NCBI chr 7:78,160,564...78,252,382
Ensembl chr 7:78,160,589...78,252,719 		JBrowse link
positive regulation of response to type II interferon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HPX hemopexin acts_upstream_of_or_within ISO (PMID:18641331) MGI PMID:18641331 NCBI chr21:29,749,913...29,759,176
Ensembl chr21:29,719,589...29,759,046 		JBrowse link
positive regulation of type II interferon-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HPX hemopexin acts_upstream_of_or_within ISO (PMID:18641331) MGI PMID:18641331 NCBI chr21:29,749,913...29,759,176
Ensembl chr21:29,719,589...29,759,046 		JBrowse link
G LOC481473 immunity-related GTPase family M protein involved_in ISO (PMID:16888103) UniProt PMID:16888103 NCBI chr11:793,416...795,373
Ensembl chr11:793,424...794,617 		JBrowse link
G LOC606863 immunity-related GTPase family M protein-like involved_in ISO (MGI:3656111|PMID:16888103) UniProt PMID:16888103 MGI:3656111 NCBI chr11:506,981...523,338
Ensembl chr11:509,636...510,829 		JBrowse link
G MED1 mediator complex subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18339625) Ensembl
MGI		 PMID:18339625 GO_REF:0000107 NCBI chr 9:22,989,257...23,019,350
Ensembl chr 9:22,989,301...23,019,349 		JBrowse link
G NLRC5 NLR family CARD domain containing 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:59,279,535...59,359,327
Ensembl chr 2:59,280,390...59,338,931 		JBrowse link
G PARP9 poly(ADP-ribose) polymerase family member 9 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr33:25,643,439...25,676,979
Ensembl chr33:25,643,883...25,677,462 		JBrowse link
G TXK TXK tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:43,911,881...43,977,499
Ensembl chr13:43,914,534...43,976,655 		JBrowse link
regulation of response to type II interferon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PARP9 poly(ADP-ribose) polymerase family member 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr33:25,643,439...25,676,979
Ensembl chr33:25,643,883...25,677,462 		JBrowse link
regulation of type II interferon-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDC37 cell division cycle 37, HSP90 cochaperone acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:16280321) MGI
Ensembl		 PMID:16280321 GO_REF:0000107 NCBI chr20:50,727,702...50,738,197
Ensembl chr20:50,727,749...50,736,269 		JBrowse link
type II interferon-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HPX hemopexin acts_upstream_of ISO (PMID:18641331) MGI PMID:18641331 NCBI chr21:29,749,913...29,759,176
Ensembl chr21:29,719,589...29,759,046 		JBrowse link
G IFNG interferon gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:10,406,866...10,411,698
Ensembl chr10:10,406,867...10,411,698 		JBrowse link
G IFNGR1 interferon gamma receptor 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:29,646,776...29,669,669
Ensembl chr 1:29,647,552...29,669,578 		JBrowse link
G IRF1 interferon regulatory factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:20,773,801...20,781,106
Ensembl chr11:20,760,120...20,781,608 		JBrowse link
G JAK1 Janus kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:45,251,653...45,408,571
Ensembl chr 5:45,251,653...45,408,571 		JBrowse link
G JAK2 Janus kinase 2 involved_in ISO PMID:11536325 BHF-UCL PMID:11536325 RGD:8553830 NCBI chr 1:93,321,055...93,438,898
Ensembl chr 1:93,142,635...93,435,997 		JBrowse link
G STAT1 signal transducer and activator of transcription 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:1,513,438...1,549,837
Ensembl chr37:1,507,219...1,550,178 		JBrowse link
G TP53 tumor protein p53 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:32,561,406...32,565,149
Ensembl chr 5:32,560,598...32,574,109 		JBrowse link
G TYK2 tyrosine kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:50,747,145...50,770,008
Ensembl chr20:50,748,329...50,769,216 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17917
    immune system process 2495
      immune response 1604
        innate immune response 833
          response to type II interferon 151
            cellular response to type II interferon + 116
            negative regulation of response to type II interferon + 6
            positive regulation of response to type II interferon + 7
            regulation of response to type II interferon + 14
Path 2
Term Annotations click to browse term
  biological_process 17917
    response to stimulus 9451
      response to biotic stimulus 1724
        response to external biotic stimulus 1681
          response to other organism 1678
            defense response to other organism 1147
              defense response to symbiont 1023
                innate immune response 833
                  response to type II interferon 151
                    cellular response to type II interferon + 116
                    negative regulation of response to type II interferon + 6
                    positive regulation of response to type II interferon + 7
                    regulation of response to type II interferon + 14
paths to the root