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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of Arp2/3 complex-mediated actin nucleation
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Accession:GO:0034315 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of actin nucleation mediated by the Arp2/3 complex and interacting proteins.



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regulation of Arp2/3 complex-mediated actin nucleation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AP1AR adaptor related protein complex 1 associated regulatory protein acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5429457|PMID:22689987) MGI
InterPro
Ensembl
PMID:22689987 GO_REF:0000002 GO_REF:0000107 MGI:5429457 NCBI chr 8:110,386,145...110,420,548
Ensembl chr 8:110,386,783...110,420,542
JBrowse link
G ARF1 ADP ribosylation factor 1 involved_in ISO PMID:23889934 UniProt PMID:23889934 RGD:8553918 NCBI chr 2:51,219,597...51,237,640
Ensembl chr 2:51,219,667...51,237,639
JBrowse link
G ARFIP1 ADP ribosylation factor interacting protein 1 involved_in IEA
IBA
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr 8:76,168,731...76,270,554
Ensembl chr 8:76,168,403...76,270,609
JBrowse link
G CARMIL1 capping protein regulator and myosin 1 linker 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:20,036,430...20,353,431
Ensembl chr 7:20,036,944...20,353,420
JBrowse link
G CARMIL2 capping protein regulator and myosin 1 linker 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:28,265,130...28,277,649
Ensembl chr 6:28,265,135...28,277,641
JBrowse link
G CARMIL3 capping protein regulator and myosin 1 linker 3 involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr 7:75,222,528...75,241,243
Ensembl chr 7:75,222,528...75,241,242
JBrowse link
G FAM241A family with sequence similarity 241 member A involved_in IEA InterPro GO_REF:0000002 NCBI chr 8:110,468,450...110,504,828
Ensembl chr 8:110,468,757...110,504,912
JBrowse link
G PICK1 protein interacting with PRKCA 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 5:9,808,444...9,829,677
Ensembl chr 5:9,808,451...9,825,539
JBrowse link
G PPP1R37 protein phosphatase 1 regulatory subunit 37 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:51,522,958...51,564,399
Ensembl chr 6:51,523,127...51,564,396
JBrowse link
G RNH1 ribonuclease/angiogenin inhibitor 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:281,919...290,522
Ensembl chr 2:281,928...290,079
JBrowse link
G TRIM3 tripartite motif containing 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:3,250,011...3,254,916
Ensembl chr 9:3,249,908...3,266,686
JBrowse link
G TRIM3 tripartite motif containing 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:3,256,915...3,281,846
Ensembl chr 9:3,272,798...3,282,366
JBrowse link
negative regulation of Arp2/3 complex-mediated actin nucleation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CORO1B coronin 1B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:5,081,294...5,086,698
Ensembl chr 2:5,080,660...5,086,690
JBrowse link
G CTNNA2 catenin alpha 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:63,205,073...64,417,990
Ensembl chr 3:63,205,084...63,455,471
JBrowse link
G DNAI3 dynein axonemal intermediate chain 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:130,765,580...130,826,828
Ensembl chr 4:130,765,354...130,826,630
JBrowse link
G GMFB glia maturation factor beta involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr 1:183,846,672...183,863,396
Ensembl chr 1:183,846,680...183,863,398
JBrowse link
G GMFG glia maturation factor gamma acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5505367|PMID:23727094) MGI
TreeGrafter
Ensembl
PMID:23727094 GO_REF:0000107 GO_REF:0000118 MGI:5505367 NCBI chr 6:47,990,241...47,997,332
Ensembl chr 6:47,990,237...47,997,260
JBrowse link
G HIP1R huntingtin interacting protein 1 related involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:29,996,388...30,024,343
Ensembl chr14:29,993,655...30,024,216
JBrowse link
G PICK1 protein interacting with PRKCA 1 involved_in ISO PMID:18297063 UniProt PMID:18297063 RGD:8554748 NCBI chr 5:9,808,444...9,829,677
Ensembl chr 5:9,808,451...9,825,539
JBrowse link
positive regulation of Arp2/3 complex-mediated actin nucleation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABI2 abl interactor 2 involved_in ISO (PMID:21107423) UniProt PMID:21107423 NCBI chr15:106,776,627...106,903,889
Ensembl chr15:106,776,631...106,900,333
JBrowse link
G BRK1 BRICK1 subunit of SCAR/WAVE actin nucleating complex involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:66,315,438...66,324,641
Ensembl chr13:66,315,315...66,324,641
JBrowse link
G CYFIP1 cytoplasmic FMR1 interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:32,064,431...32,175,095
Ensembl chr15:32,064,475...32,175,094
JBrowse link
G FCHSD2 FCH and double SH3 domains 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:7,366,516...7,619,960
Ensembl chr 9:7,366,523...7,608,469
JBrowse link
G LOC110256054 wiskott-Aldrich syndrome protein family member 1-like involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr12:41,049,943...41,076,524 JBrowse link
G NCKAP1 NCK associated protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:88,425,861...88,528,417
Ensembl chr15:88,425,142...88,528,326
JBrowse link
G WASF1 WASP family member 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:76,107,595...76,180,335 JBrowse link
G WASF2 WASP family member 2 involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr 6:84,621,742...84,697,428
Ensembl chr 6:84,622,800...84,697,429
JBrowse link
G WASF3 WASP family member 3 involved_in IEA
IBA
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr11:4,261,121...4,366,258
Ensembl chr11:4,261,177...4,366,253
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17778
    cellular process 16846
      actin filament-based process 846
        actin cytoskeleton organization 760
          actin filament organization 499
            actin nucleation 61
              Arp2/3 complex-mediated actin nucleation 45
                regulation of Arp2/3 complex-mediated actin nucleation 27
                  negative regulation of Arp2/3 complex-mediated actin nucleation 7
                  positive regulation of Arp2/3 complex-mediated actin nucleation 9
Path 2
Term Annotations click to browse term
  biological_process 17778
    cellular process 16846
      cellular component organization or biogenesis 6691
        cellular component organization 6476
          organelle organization 3617
            cytoskeleton organization 1545
              regulation of cytoskeleton organization 559
                regulation of actin cytoskeleton organization 378
                  regulation of actin filament organization 294
                    regulation of actin nucleation 37
                      regulation of Arp2/3 complex-mediated actin nucleation 27
                        negative regulation of Arp2/3 complex-mediated actin nucleation 7
                        positive regulation of Arp2/3 complex-mediated actin nucleation 9
paths to the root