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ONTOLOGY REPORT - ANNOTATIONS


Term:primary alcohol catabolic process
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Accession:GO:0034310 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of primary alcohols. A primary alcohol is any alcohol in which a hydroxy group, -OH, is attached to a saturated carbon atom which has either three hydrogen atoms attached to it or only one other carbon atom and two hydrogen atoms attached to it.
Synonyms:exact_synonym: monohydric alcohol catabolic process;   primary alcohol breakdown;   primary alcohol catabolism;   primary alcohol degradation



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ethanol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adh1 alcohol dehydrogenase 1C (class I), gamma polypeptide acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:2180100 (MGI:1338643|PMID:10358022), (MGI:54726|PMID:518534)
GO_REF:0000107
RGD
Ensembl
PMID:518534 PMID:10358022 GO_REF:0000107 MGI:1338643 MGI:54726 NCBI chr 2:226,797,303...226,808,892
Ensembl chr 2:226,797,303...226,808,892
JBrowse link
G Adh5 alcohol dehydrogenase 5 (class III), chi polypeptide IDA RGD PMID:18207224 RGD:5129089 NCBI chr 2:226,975,184...226,987,591
Ensembl chr 2:226,947,466...226,987,591
JBrowse link
G Adh7 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2180102 (MGI:1338643|PMID:10358022)
Ensembl
RGD
PMID:10358022 GO_REF:0000107 MGI:1338643 NCBI chr 2:226,748,724...226,763,183
Ensembl chr 2:226,741,788...226,763,182
JBrowse link
G Aldh1a7 aldehyde dehydrogenase family 1, subfamily A7 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 1:218,201,443...218,241,410
Ensembl chr 1:218,201,472...218,248,906
JBrowse link
G Aldh1b1 aldehyde dehydrogenase 1 family, member B1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 5:60,063,370...60,068,378
Ensembl chr 5:60,063,225...60,068,378
JBrowse link
G Aldh2 aldehyde dehydrogenase 2 family member involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr12:34,949,549...34,982,527
Ensembl chr12:34,901,219...34,982,521
JBrowse link
G Aldh3b1 aldehyde dehydrogenase 3 family, member B1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 1:201,145,309...201,162,675
Ensembl chr 1:201,145,309...201,163,921
JBrowse link
G Sult1a1 sulfotransferase family 1A member 1 involved_in ISO (PMID:23207770) RGD PMID:23207770 NCBI chr 1:181,272,022...181,276,750
Ensembl chr 1:181,272,023...181,275,562
JBrowse link
G Sult1b1 sulfotransferase family 1B member 1 involved_in ISO (PMID:23207770) RGD PMID:23207770 NCBI chr14:20,492,763...20,505,491
Ensembl chr14:20,492,708...20,505,483
JBrowse link
G Sult1e1 sulfotransferase family 1E member 1 involved_in ISO (PMID:23207770) RGD PMID:23207770 NCBI chr14:20,422,324...20,439,562
Ensembl chr14:20,422,324...20,439,275
JBrowse link
G Sult2a1 sulfotransferase family 2A member 1 involved_in ISO (PMID:23207770) RGD PMID:23207770 NCBI chr 1:75,451,178...75,508,142
Ensembl chr 1:74,911,100...75,508,134
JBrowse link
farnesol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1b10 aldo-keto reductase family 1 member B10 involved_in ISO (PMID:21187079) RGD PMID:21187079 NCBI chr 4:63,038,459...63,060,336
Ensembl chr 4:63,040,169...63,053,852
JBrowse link
G Akr1c3 aldo-keto reductase family 1, member C3 involved_in ISO (PMID:21187079) RGD PMID:21187079 NCBI chr17:66,110,970...66,127,867
Ensembl chr17:66,110,963...66,127,873
JBrowse link
glycolate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hao1 hydroxyacid oxidase 1 involved_in ISO (PMID:18215067) RGD PMID:18215067 NCBI chr 3:121,757,400...121,828,721
Ensembl chr 3:121,771,836...121,828,721
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18737
    metabolic process 11461
      small molecule metabolic process 1805
        alcohol metabolic process 376
          primary alcohol metabolic process 105
            primary alcohol catabolic process 14
              (+)-lariciresinol catabolic process 0
              aldosterone catabolic process 0
              chanoclavine-I catabolic process 0
              chrysobactin catabolic process 0
              ethanol catabolic process + 11
              ethanolamine catabolic process 0
              farnesol catabolic process 2
              geraniol catabolic process 0
              glycolate catabolic process 1
              methanol catabolic process 0
              octanol catabolic process 0
              thiamine catabolic process 0
Path 2
Term Annotations click to browse term
  biological_process 18737
    metabolic process 11461
      organic substance metabolic process 11023
        organic substance catabolic process 2133
          organic hydroxy compound catabolic process 76
            alcohol catabolic process 54
              primary alcohol catabolic process 14
                (+)-lariciresinol catabolic process 0
                aldosterone catabolic process 0
                chanoclavine-I catabolic process 0
                chrysobactin catabolic process 0
                ethanol catabolic process + 11
                ethanolamine catabolic process 0
                farnesol catabolic process 2
                geraniol catabolic process 0
                glycolate catabolic process 1
                methanol catabolic process 0
                octanol catabolic process 0
                thiamine catabolic process 0
paths to the root